Citrus Sinensis ID: 039097

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Protein Sequence
MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF
Secondary Structure (PSIPRED)
cccccccEEEEEccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHccccEEEEEcccccccccccccccHHHHHHHccccccccHHHHHHHHccccccHHHHHHHHHHHHcccccccEEEEccccHHHHHccHHHHcccccccccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccHHHHHHHHHHHHccccccccEEEEEccEEccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEcccccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccEEEEcccccccHHHHHHHHHHHccccHHHHHHHHHHHcHHHHHHHHHHHHHHccccccEEEEEccHHHHHcccccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccEEEccccccccccHHHcccccEEEEEccccccccEEEEcccEccc
Coil and Loop (DISEMBL)
MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKhsgfdnvifhqldvadpaaIHSVADFIRShfgkldilvnnagitgissdadtlSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPllqlsdsarIVNVSSSLGKLMYVTHEWakgvfsdaenlteERVDEVLSQYLNDykegspetkgwpaNAAAYILSKAAMNAYTRILAKkypnfcincvcpgyvktemtynagrltveegaeSPVWLALLhkggpsglffsrkeetlf
Flexible Loop (DISEMBL)
maetakryavvtgankgigyEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGvfsdaenltEERVDEVLSQYLNDYKegspetkgwPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHkggpsglffsrkeetlf
Low Complexity Region (SEG)
MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF
Disordered region (IsUnstruct)
******RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYK*****TKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFF********
Disordered Region (DISOPRED)
****AKR*AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF
Disordered Region (DISEMBL)
MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF
Disordered Region (DISPRO)
*****KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	290	2.2.26 [Sep-21-2011]
Q9M2E2	296	(+)-neomenthol dehydrogen	yes	no	1.0	0.979	0.604	9e-99
Q9ZUH5	296	Short-chain dehydrogenase	no	no	1.0	0.979	0.570	1e-95
B2X050	314	(+)-neomenthol dehydrogen	N/A	no	1.0	0.923	0.541	6e-89
A4UHT7	311	Salutaridine reductase OS	N/A	no	0.989	0.922	0.543	7e-87
Q6WAU1	314	(-)-isopiperitenone reduc	N/A	no	0.975	0.901	0.535	3e-76
Q8K354	277	Carbonyl reductase [NADPH	no	no	0.848	0.888	0.381	2e-40
P48758	277	Carbonyl reductase [NADPH	no	no	0.893	0.935	0.362	3e-39
P16152	277	Carbonyl reductase [NADPH	yes	no	0.872	0.913	0.366	2e-38
Q5RCU5	277	Carbonyl reductase [NADPH	yes	no	0.872	0.913	0.366	2e-38
Q3SZD7	277	Carbonyl reductase [NADPH	no	no	0.879	0.920	0.358	7e-38

>sp|Q9M2E2|SDR1_ARATH (+)-neomenthol dehydrogenase OS=Arabidopsis thaliana GN=SDR1 PE=1 SV=1

 Score =  360 bits (923), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 179/296 (60%), Positives = 229/296 (77%), Gaps = 6/296 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS---GFDN 57
           MAE   RYAVVTGAN+GIG+E+ RQLA  GI  VLT+RDE  GLEAVE LK        +
Sbjct: 1   MAEETPRYAVVTGANRGIGFEICRQLASEGIRVVLTSRDENRGLEAVETLKKELEISDQS 60

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTL-SGFIEEGVARGK 116
           ++FHQLDVADPA+I S+A+F+++ FGKLDILVNNAGI GI +DA+ L +G  +EG    +
Sbjct: 61  LLFHQLDVADPASITSLAEFVKTQFGKLDILVNNAGIGGIITDAEALRAGAGKEGFKWDE 120

Query: 117 M-TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
           + T+TYE  E+C++ NY G KRMCEA IPLL+LSDS RIVNVSSS+G+L  V +EWAKG+
Sbjct: 121 IITETYELTEECIKINYYGPKRMCEAFIPLLKLSDSPRIVNVSSSMGQLKNVLNEWAKGI 180

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
            SDAENLTEER+D+V++Q LND+KEG+ + K W    +AY++SKA++N YTR+LAKK+P 
Sbjct: 181 LSDAENLTEERIDQVINQLLNDFKEGTVKEKNWAKFMSAYVVSKASLNGYTRVLAKKHPE 240

Query: 236 FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEETLF 290
           F +N VCPG+VKT+M +  G L+VEEGA SPV LALL H+  PSG FFSRK+ + F
Sbjct: 241 FRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPHQETPSGCFFSRKQVSEF 296

Involved in basal resistance against pathogens.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 0EC: 8

>sp|Q9ZUH5|SDR2B_ARATH Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana GN=SDR2b PE=1 SV=1

 Score =  349 bits (895), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 169/296 (57%), Positives = 224/296 (75%), Gaps = 6/296 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS---GFDN 57
           MAE + RYA+VTG N+GIG+E+ RQLA  GI  +LT+RDEK GLEAVE LK        +
Sbjct: 1   MAEESPRYAIVTGGNRGIGFEICRQLANKGIRVILTSRDEKQGLEAVETLKKELEISDQS 60

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTL-SGFIEEGVA-RG 115
           ++FHQLDV+DP ++ S+A+F+++HFGKLDIL+NNAG+ G+ +D D L +G  +EG     
Sbjct: 61  IVFHQLDVSDPVSVTSLAEFVKTHFGKLDILINNAGVGGVITDVDALRAGTGKEGFKWEE 120

Query: 116 KMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
            +T+TYE AE+C++ NY G KRMCEA IPLLQLSDS RI+NVSS +G++  + +EWAKG+
Sbjct: 121 TITETYELAEECIKINYYGPKRMCEAFIPLLQLSDSPRIINVSSFMGQVKNLVNEWAKGI 180

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
            SDAENLTE R+D+V++Q LND KE + +TK W    +AY++SKA +NAYTRILAKK+P 
Sbjct: 181 LSDAENLTEVRIDQVINQLLNDLKEDTAKTKYWAKVMSAYVVSKAGLNAYTRILAKKHPE 240

Query: 236 FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEETLF 290
             +N VCPG+VKT+M +  G L+VEEGA SPV LALL H+  PSG FF RK+ + F
Sbjct: 241 IRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPHQESPSGCFFDRKQVSEF 296

Arabidopsis thaliana (taxid: 3702)

>sp|B2X050|MNR1_CAPAN (+)-neomenthol dehydrogenase OS=Capsicum annuum GN=MNR1 PE=1 SV=1

 Score =  327 bits (838), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 170/314 (54%), Positives = 223/314 (71%), Gaps = 24/314 (7%)

Query: 1   MAE--TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH-SGF-- 55
           MAE  T+ RYAVVTG NKGIGYE  RQLA  G++ VLT+RDEK G+EA+E+LK  S F  
Sbjct: 1   MAEKTTSTRYAVVTGGNKGIGYETCRQLASKGVVVVLTSRDEKKGIEAIERLKEESNFTD 60

Query: 56  DNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT------LSGFI- 108
           ++++FHQLD+ DPA+I S+ + I++ FG+LDIL+NNAGI+G+  + D       L  +I 
Sbjct: 61  EHILFHQLDIMDPASISSLVNLIKTKFGRLDILINNAGISGVMVEGDVQVLKEILERYIS 120

Query: 109 -----EEGVARGKMTQT-------YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN 156
                +E    G  T++       YE  ++C++TNY GAKRM EA IPLLQLS+S RIVN
Sbjct: 121 IVFTEDENGEEGGWTKSGPGSVTNYELTKECIETNYYGAKRMTEAFIPLLQLSNSPRIVN 180

Query: 157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYI 216
           V+SS+GKL  + ++WA  V  DA++LTEE+VD+V++++L D+ E S E+KGWP+   AY 
Sbjct: 181 VASSMGKLKLLCNKWAIEVLRDADSLTEEKVDQVVNEFLKDFTEKSTESKGWPSYFTAYK 240

Query: 217 LSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGG 276
           +SKA++ AYTR+LA KYPNF IN VCPGY KT++  N G LT  EGAES V LALL   G
Sbjct: 241 VSKASLIAYTRVLATKYPNFRINSVCPGYCKTDVNANTGSLTAGEGAESLVNLALLPNDG 300

Query: 277 PSGLFFSRKEETLF 290
           PSGLFF RKE T F
Sbjct: 301 PSGLFFYRKEVTFF 314

Involved in basal resistance against pathogens.

Capsicum annuum (taxid: 4072)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 0

EC: 8

>sp|A4UHT7|SALR_PAPBR Salutaridine reductase OS=Papaver bracteatum GN=SALR PE=1 SV=1

 Score =  320 bits (820), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 164/302 (54%), Positives = 203/302 (67%), Gaps = 15/302 (4%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           T  R AVVTG NKGIG+E+ +QL+ +GI+ VLT RD   GLEAVEKLK+S  +NV+FHQL
Sbjct: 10  TKMRCAVVTGGNKGIGFEICKQLSSSGIMVVLTCRDVTRGLEAVEKLKNSNHENVVFHQL 69

Query: 64  DVADP-AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFI-------------- 108
           DV DP   + S+ADFI++ FGKLDILVNNAG+ G S DAD     I              
Sbjct: 70  DVTDPITTMSSLADFIKARFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEEVVKIY 129

Query: 109 EEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT 168
           E+  A+  M++TYE AE+CL+ NY G K + E L+PLLQLSDS RIVNVSSS G L YV+
Sbjct: 130 EKPEAQELMSETYELAEECLKINYYGVKSVTEVLLPLLQLSDSPRIVNVSSSTGSLKYVS 189

Query: 169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI 228
           +E A  +  D + LTEER+D V++  L D+KE   ET GWP+  AAY  SKA +NAYTR+
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249

Query: 229 LAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET 288
           LAKK P F +NCVCPG VKTEM Y  G  T +EGA+  V +AL    GPSG F+   E +
Sbjct: 250 LAKKIPKFQVNCVCPGLVKTEMNYGIGNYTADEGAKHVVRIALFPDDGPSGFFYDCSELS 309

Query: 289 LF 290
            F
Sbjct: 310 AF 311

Involved in biosynthesis of morphinan-type benzylisoquinoline alkaloids. Catalyzes the stereospecific conversion of salutaridine to salutaridinol.

Papaver bracteatum (taxid: 215227)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 8

>sp|Q6WAU1|IPIPR_MENPI (-)-isopiperitenone reductase OS=Mentha piperita PE=1 SV=1

 Score =  285 bits (728), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 165/308 (53%), Positives = 211/308 (68%), Gaps = 25/308 (8%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS---GFDN 57
           MAE  +RYA+VTGANKGIG+E+ RQLA  GII +LT+R+EK GLEA +KL        + 
Sbjct: 1   MAEV-QRYALVTGANKGIGFEICRQLAEKGIIVILTSRNEKRGLEARQKLLKELNVSENR 59

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGIS--SDADTLSGFIE------ 109
           ++FHQLDV D A++ +VA FI+S FGKLDILVNNAG++G+    D    + +IE      
Sbjct: 60  LVFHQLDVTDLASVAAVAVFIKSKFGKLDILVNNAGVSGVEMVGDVSVFNEYIEADFKAL 119

Query: 110 -------------EGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN 156
                        +  A G+M + +E A+ C+ TNY G KR+ +ALIPLLQLS S RIVN
Sbjct: 120 QALEAGAKEEPPFKPKANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVN 179

Query: 157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYI 216
           VSSS G L+ + +EWAKGV  D + LTEERVDEV+  +L D KEG  E   WP + AA  
Sbjct: 180 VSSSFGSLLLLWNEWAKGVLGDEDRLTEERVDEVVEVFLKDIKEGKLEESQWPPHFAAER 239

Query: 217 LSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGG 276
           +SKAA+NAYT+I AKKYP+F IN +CPGY KT++T++AG L+V E A+ PV LALL  GG
Sbjct: 240 VSKAALNAYTKIAAKKYPSFRINAICPGYAKTDITFHAGPLSVAEAAQVPVKLALLPDGG 299

Query: 277 PSGLFFSR 284
           PSG FF R
Sbjct: 300 PSGCFFPR 307

Monoterpene synthase that catalyzes the specific reduction of the 1(2)-double bond of (-)-isopiperitenone to produce (+)-cis-isopulegone. Does not catalyze the reverse reaction. Unable to reduce (+)-pulegone, (+)-cis-isopulegone, (-)-menthone or the 1,2-double bond of (-)-carvone. Able to utilize NADH with 20% the efficiency of NADPH.

Mentha piperita (taxid: 34256)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 8

EC: 2

>sp|Q8K354|CBR3_MOUSE Carbonyl reductase [NADPH] 3 OS=Mus musculus GN=Cbr3 PE=2 SV=1

 Score =  166 bits (420), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/278 (38%), Positives = 155/278 (55%), Gaps = 32/278 (11%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
           +  R A+VTGANKGIG+ + R L    +G + VLTARDE  G  AV++L+  G  +  FH
Sbjct: 3   SCSRVALVTGANKGIGFAITRDLCRKFSGDV-VLTARDEARGRAAVQQLQAEGL-SPRFH 60

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
           QLD+ DP +I ++ DF+R  +G L++LVNNAGI     D                 T   
Sbjct: 61  QLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDP----------------TPFD 104

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG-KLMYVTHEWAKGVFSDAE 180
             AE  L+TN+   + +C  L+P+++     R+VN+SS  G K +    E  +  F   +
Sbjct: 105 IQAEVTLKTNFFATRNVCTELLPIMK--PHGRVVNISSLQGLKALENCREDLQEKFR-CD 161

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK------KYP 234
            LTE  + +++ +++ D K    E +GWP   +AY +SK  +   TRILA+      K  
Sbjct: 162 TLTEVDLVDLMKKFVEDTKNEVHEREGWPD--SAYGVSKLGVTVLTRILARQLDEKRKAD 219

Query: 235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
              +N  CPG+VKT+M  + G  TVEEGAE+PV+LALL
Sbjct: 220 RILLNACCPGWVKTDMARDQGSRTVEEGAETPVYLALL 257

Has low NADPH-dependent oxidoreductase activity towards 4-benzoylpyridine and menadione (in vitro).

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P48758|CBR1_MOUSE Carbonyl reductase [NADPH] 1 OS=Mus musculus GN=Cbr1 PE=1 SV=3

 Score =  162 bits (409), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 164/295 (55%), Gaps = 36/295 (12%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
           +++  A+VTGANKGIG+ + R L    +G + VL ARDE+ G  AV+KL+  G  +  FH
Sbjct: 3   SSRPVALVTGANKGIGFAITRDLCRKFSGDV-VLAARDEERGQTAVQKLQAEGL-SPRFH 60

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
           QLD+ +P +I ++ DF+   +G LD+LVNNAGI    +D                 T  +
Sbjct: 61  QLDIDNPQSIRALRDFLLKEYGGLDVLVNNAGIAFKVNDD----------------TPFH 104

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDA 179
             AE  ++TN+ G + +C+ L+PL++     R+VNVSS  SL  L     E  +   S  
Sbjct: 105 IQAEVTMKTNFFGTRDVCKELLPLIK--PQGRVVNVSSMVSLRALKNCRLELQQKFRS-- 160

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY------ 233
           E +TEE +  ++++++ D K+G    +GWP   +AY ++K  +   +RILA+K       
Sbjct: 161 ETITEEELVGLMNKFVEDTKKGVHAEEGWP--NSAYGVTKIGVTVLSRILARKLNEQRRG 218

Query: 234 PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRKE 286
               +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F   K+
Sbjct: 219 DKILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVQDKK 273

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|P16152|CBR1_HUMAN Carbonyl reductase [NADPH] 1 OS=Homo sapiens GN=CBR1 PE=1 SV=3

 Score =  159 bits (402), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 36/289 (12%)

Query: 9   AVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           A+VTG NKGIG  +VR L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ 
Sbjct: 8   ALVTGGNKGIGLAIVRDLCRLFSGDV-VLTARDVTRGQAAVQQLQAEGL-SPRFHQLDID 65

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  +  AE 
Sbjct: 66  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEV 109

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTE 184
            ++TN+ G + +C  L+PL++     R+VNVSS  S+  L   + E  +   S  E +TE
Sbjct: 110 TMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRS--ETITE 165

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP------NFCI 238
           E +  ++++++ D K+G  + +GWP  ++AY ++K  +   +RI A+K           +
Sbjct: 166 EELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL 223

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRK 285
           N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct: 224 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q5RCU5|CBR1_PONAB Carbonyl reductase [NADPH] 1 OS=Pongo abelii GN=CBR1 PE=2 SV=3

 Score =  159 bits (402), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 36/289 (12%)

Query: 9   AVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           A+VTG NKGIG  +VR L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ 
Sbjct: 8   ALVTGGNKGIGLAIVRDLCRLFSGDV-VLTARDVARGQAAVQQLQAEGL-SPRFHQLDID 65

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  +  AE 
Sbjct: 66  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEV 109

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTE 184
            ++TN+ G + +C  L+PL++     R+VNVSS  S+  L   + E  +   S  E +TE
Sbjct: 110 TMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRS--ETITE 165

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP------NFCI 238
           E +  ++++++ D K+G  + +GWP  ++AY ++K  +   +RI A+K           +
Sbjct: 166 EELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDRILL 223

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRK 285
           N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct: 224 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

>sp|Q3SZD7|CBR1_BOVIN Carbonyl reductase [NADPH] 1 OS=Bos taurus GN=CBR1 PE=2 SV=1

 Score =  157 bits (398), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/287 (35%), Positives = 156/287 (54%), Gaps = 32/287 (11%)

Query: 9   AVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           A+VTGANKGIG+ +VR L    +G + VLTARDE  G  AV++L+  G  + +FHQLD+ 
Sbjct: 8   ALVTGANKGIGFVIVRDLCRRFSGDV-VLTARDEARGRAAVQQLQAEGL-SPLFHQLDID 65

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  +I ++ DF+R  +G LD+LVNNAGI   ++D                 T  +  AE 
Sbjct: 66  DRQSIRALRDFLRKEYGGLDVLVNNAGIAFKTADT----------------TPFHIQAEV 109

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN+ G + +C  L+PL++       V+   S+  L   + E  +   S  E +TEE 
Sbjct: 110 TMKTNFFGTRDVCTELLPLIKPQGRVVNVSSFVSVNSLKKCSRELQQKFRS--ETITEEE 167

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP------NFCINC 240
           +  ++++++ D K G    +GWP    AY ++K  +   +RI A+K           +N 
Sbjct: 168 LVGLMNKFVEDTKNGVHRKEGWPDT--AYGVTKIGVTVLSRIHARKLSEQRGGDKILLNA 225

Query: 241 VCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRK 285
            CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct: 226 CCPGWVRTDMGGPKASKSPEEGAETPVYLALLPSDAEGPHGEFISEK 272

NADPH-dependent reductase with broad substrate specificity. Catalyzes the reduction of a wide variety of carbonyl compounds including quinones, prostaglandins, menadione, plus various xenobiotics. Catalyzes the reduction of the antitumor anthracyclines doxorubicin and daunorubicin to the cardiotoxic compounds doxorubicinol and daunorubicinol. Can convert prostaglandin E2 to prostaglandin F2-alpha. Can bind glutathione, which explains its higher affinity for glutathione-conjugated substrates. Catalyzes the reduction of S-nitrosoglutathione.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
359489616	297	PREDICTED: (+)-neomenthol dehydrogenase-	1.0	0.976	0.666	1e-110
225454097	297	PREDICTED: (+)-neomenthol dehydrogenase	1.0	0.976	0.659	1e-108
224064013	296	predicted protein [Populus trichocarpa]	1.0	0.979	0.672	1e-108
357514625	380	(+)-neomenthol dehydrogenase [Medicago t	0.979	0.747	0.667	1e-107
297745216	298	unnamed protein product [Vitis vinifera]	1.0	0.973	0.647	1e-105
147800243	298	hypothetical protein VITISV_002460 [Viti	0.993	0.966	0.653	1e-104
359489600	539	PREDICTED: (+)-neomenthol dehydrogenase	0.996	0.536	0.646	1e-104
255541520	544	carbonyl reductase, putative [Ricinus co	0.996	0.531	0.644	1e-102
297745219	302	unnamed protein product [Vitis vinifera]	0.965	0.927	0.661	1e-101
224144319	290	predicted protein [Populus trichocarpa]	0.979	0.979	0.644	1e-101

>gi|359489616|ref|XP_002267348.2| PREDICTED: (+)-neomenthol dehydrogenase-like [Vitis vinifera] gi|297745217|emb|CBI40297.3| unnamed protein product [Vitis vinifera]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 198/297 (66%), Positives = 230/297 (77%), Gaps = 7/297 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MAE A RYAVVTGANKGIG E+ RQLA NG+  VLTARDEK GLEA+E LK SG  N++F
Sbjct: 1   MAEAATRYAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSNLVF 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGK--- 116
           HQLDV DPA+I S+ADFI++ FGKLDILVNNAGI G + +D D L   I    A GK   
Sbjct: 61  HQLDVGDPASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRSRIASAEAVGKVNW 120

Query: 117 ---MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAK 173
              M + +E  E+CL+ NY G KRM EA IPLLQLSDS RIVNVSSS+GKL  + +EWAK
Sbjct: 121 KEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNEWAK 180

Query: 174 GVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY 233
            V SDAENLTEERVDEVL+Q+L D+KEG  E K WP+N +AY +SKAA+NAYTRILA+KY
Sbjct: 181 AVLSDAENLTEERVDEVLNQFLKDFKEGLLEAKSWPSNLSAYTVSKAALNAYTRILARKY 240

Query: 234 PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           P  CINCVCPG+VKT++ YN+G LT+EEGAESPV LALL  GGPSG FF RKE + F
Sbjct: 241 PTLCINCVCPGFVKTDLNYNSGILTIEEGAESPVRLALLPDGGPSGQFFVRKEVSEF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454097|ref|XP_002267820.1| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera] gi|297745218|emb|CBI40298.3| unnamed protein product [Vitis vinifera]

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/297 (65%), Positives = 228/297 (76%), Gaps = 7/297 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MAE A RYAVVTGANKGIG E+ RQLA NG+  VLTARDEK GLEA+E LK SG  N++F
Sbjct: 1   MAEAATRYAVVTGANKGIGLEICRQLAANGVRVVLTARDEKRGLEALESLKGSGLSNLVF 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGK--- 116
           HQLDV DPA+I S+ADFI++ FGKLDILVNNAGI G + +D D L        A GK   
Sbjct: 61  HQLDVGDPASISSIADFIKAQFGKLDILVNNAGIGGTVVTDPDALRSRYASAEAVGKVNW 120

Query: 117 ---MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAK 173
              M + +E  E+CL+ NY G KRM EA IPLLQLSDS RIVNVSSS+GKL  + +EWAK
Sbjct: 121 KEIMIEPFELVEECLKINYYGPKRMIEAFIPLLQLSDSPRIVNVSSSMGKLQNIKNEWAK 180

Query: 174 GVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY 233
            V SDAENLTEERVDEVL+Q+L D+KEG  E K WP+N +AY +SKAA+NAYTRILA+K 
Sbjct: 181 AVLSDAENLTEERVDEVLNQFLKDFKEGLLEAKSWPSNVSAYTVSKAALNAYTRILARKC 240

Query: 234 PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           P  CINCVCPG+VKT++ YN+G LT+EEGAESPV LALL  GGPSG FF RKE + F
Sbjct: 241 PTLCINCVCPGFVKTDLNYNSGILTIEEGAESPVRLALLPDGGPSGQFFVRKEVSEF 297

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224064013|ref|XP_002301348.1| predicted protein [Populus trichocarpa] gi|222843074|gb|EEE80621.1| predicted protein [Populus trichocarpa]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/296 (67%), Positives = 235/296 (79%), Gaps = 6/296 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVI 59
           MAE  K YAVVTGANKGIG+E+ RQLA  GI+ VLT+R+EK GLE+V+KLK SG  D V+
Sbjct: 1   MAEATKSYAVVTGANKGIGFEICRQLASKGIVVVLTSRNEKRGLESVQKLKESGLSDFVV 60

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFI--EEGVARGK- 116
           FHQLDVAD  +I S+ADFI+S FGKLDILVNNAG+ G+ +D D L   I  +EG      
Sbjct: 61  FHQLDVADINSIASLADFIKSQFGKLDILVNNAGVGGVKTDGDALKAAISGKEGAKINWS 120

Query: 117 --MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKG 174
             +TQT+E AE+CL+ NY GAKRM EALIPLLQLSDS RIVNVSSS+G L  V++EWAKG
Sbjct: 121 EFITQTWELAEECLRINYYGAKRMAEALIPLLQLSDSPRIVNVSSSMGNLKGVSNEWAKG 180

Query: 175 VFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP 234
           V  DAENLTEERVDEVLS+YL D+KEGS ET+GWPA  +AYILSKAAM+A+TR+LAKK+P
Sbjct: 181 VLGDAENLTEERVDEVLSKYLEDFKEGSLETEGWPAMMSAYILSKAAMSAFTRVLAKKHP 240

Query: 235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
            FC+NCVCPGYVKT++ +N G   VEEGAE+ V LALL  GGPSG FF R EE+ F
Sbjct: 241 TFCVNCVCPGYVKTDINFNTGIRPVEEGAENVVRLALLPNGGPSGCFFDRTEESPF 296

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357514625|ref|XP_003627601.1| (+)-neomenthol dehydrogenase [Medicago truncatula] gi|355521623|gb|AET02077.1| (+)-neomenthol dehydrogenase [Medicago truncatula]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 195/292 (66%), Positives = 234/292 (80%), Gaps = 8/292 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVI 59
           M E  KRYAVVTG+NKGIG+E+VRQLA +GI  VLTARDEK GL A+E LK SG  D V+
Sbjct: 83  MGEPTKRYAVVTGSNKGIGFEIVRQLASDGIKVVLTARDEKRGLHALETLKASGLSDFVL 142

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGIS-SDADTL------SGFIEEGV 112
           FHQLDVAD +++ S+ADF++SHFGKLDILVNNAGI+G+   D D        SG + +  
Sbjct: 143 FHQLDVADASSVASLADFVKSHFGKLDILVNNAGISGVEVKDRDLFTSAIMTSGALPDEE 202

Query: 113 ARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWA 172
            R  +TQTYESA++C+Q NY GAKR  E L+PLLQLSDS R+VNVSS LGK+  V++EWA
Sbjct: 203 LRRAVTQTYESAKECIQINYYGAKRAFEYLLPLLQLSDSPRVVNVSSFLGKIELVSNEWA 262

Query: 173 KGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK 232
           KGVFSD ENLTEER+DEVL +++ D++EGS E+KGWP  AAAY ++KA+MNAYT ILAKK
Sbjct: 263 KGVFSDVENLTEERIDEVLEEFIKDFEEGSLESKGWPRFAAAYTVAKASMNAYTIILAKK 322

Query: 233 YPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSR 284
           YPNFCINCVCPGYVKT+MT N G LTVEEGA +PV LALL KG PSGLF+S+
Sbjct: 323 YPNFCINCVCPGYVKTDMTTNTGILTVEEGATNPVRLALLPKGSPSGLFYSQ 374

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745216|emb|CBI40296.3| unnamed protein product [Vitis vinifera]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/298 (64%), Positives = 230/298 (77%), Gaps = 8/298 (2%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MAE   RYAV+TGANKGIG E+ RQLA NG+I VLTARDEK G+EA+E LK SG  NV+F
Sbjct: 1   MAEATNRYAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSNVVF 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVAR-GK-- 116
           HQLDV DPA+I S+ADFI++ FGKLDILVNNAGI G + +D D     I    A+ GK  
Sbjct: 61  HQLDVGDPASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGKIN 120

Query: 117 ----MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWA 172
               M + +E AE+C++ NY G KRM E LIPLL+LSDS RIVNVSSS+G+L  + +EWA
Sbjct: 121 WKEIMIEPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNEWA 180

Query: 173 KGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK 232
           KGV SDAENLTEERVDEVL+ +L D+KEGS E K WP   +A  +SK+A+NAYTRI+AKK
Sbjct: 181 KGVLSDAENLTEERVDEVLNVFLKDFKEGSLEAKSWPTFLSANTVSKSALNAYTRIMAKK 240

Query: 233 YPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           YP FCINCVCPG+VKT++ YN+G LTVEEGAESPV LALL  GGPSG FF +KE + F
Sbjct: 241 YPTFCINCVCPGFVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGQFFLQKEVSEF 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800243|emb|CAN77657.1| hypothetical protein VITISV_002460 [Vitis vinifera] gi|297745213|emb|CBI40293.3| unnamed protein product [Vitis vinifera]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/300 (65%), Positives = 227/300 (75%), Gaps = 12/300 (4%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MAE  K+YAVVTGANKGIG  + R+LA NG+  VLTARDEK G+EA+E LK SG  NVIF
Sbjct: 1   MAEATKKYAVVTGANKGIGLGICRELAANGVTVVLTARDEKRGVEALESLKGSGLSNVIF 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKM-- 117
           HQLDV  PA+I S+ADFI++ FGKLDILVNNAG+ G I +D D L   I    A+G++  
Sbjct: 61  HQLDVGQPASIASLADFIKTQFGKLDILVNNAGVIGMIVTDPDALRSAI--AAAQGRIGE 118

Query: 118 -------TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHE 170
                   Q  E AE+CL+ NY G KRM EAL+PLLQLSD  RIVNVSSS GKL  + +E
Sbjct: 119 VNWNEIVIQPLEMAEECLKINYYGPKRMIEALMPLLQLSDLPRIVNVSSSGGKLQNIPNE 178

Query: 171 WAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA 230
           WAKGV SDAENLTEE V EVL+Q+L D+KEG  E K WP   +AY +SKAA+NAYTR+LA
Sbjct: 179 WAKGVLSDAENLTEETVIEVLNQFLKDFKEGLLEAKSWPTFFSAYRVSKAALNAYTRLLA 238

Query: 231 KKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           KKYP FCINCVCPGYVKT++ YN+G LTVEEGAESPV LALL  GGPSGLFF RKE + F
Sbjct: 239 KKYPTFCINCVCPGYVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGLFFVRKEVSDF 298

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489600|ref|XP_002267232.2| PREDICTED: (+)-neomenthol dehydrogenase [Vitis vinifera]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/297 (64%), Positives = 229/297 (77%), Gaps = 8/297 (2%)

Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
           AE   RYAV+TGANKGIG E+ RQLA NG+I VLTARDEK G+EA+E LK SG  NV+FH
Sbjct: 243 AEYLFRYAVITGANKGIGLEICRQLAANGVIVVLTARDEKRGVEALESLKGSGLSNVVFH 302

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVAR-GK--- 116
           QLDV DPA+I S+ADFI++ FGKLDILVNNAGI G + +D D     I    A+ GK   
Sbjct: 303 QLDVGDPASIASLADFIKTQFGKLDILVNNAGIIGTLVTDPDGFRLGIPAARAKVGKINW 362

Query: 117 ---MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAK 173
              M + +E AE+C++ NY G KRM E LIPLL+LSDS RIVNVSSS+G+L  + +EWAK
Sbjct: 363 KEIMIEPFELAEECMKINYYGPKRMSEVLIPLLRLSDSPRIVNVSSSMGRLQNIKNEWAK 422

Query: 174 GVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY 233
           GV SDAENLTEERVDEVL+ +L D+KEGS E K WP   +A  +SK+A+NAYTRI+AKKY
Sbjct: 423 GVLSDAENLTEERVDEVLNVFLKDFKEGSLEAKSWPTFLSANTVSKSALNAYTRIMAKKY 482

Query: 234 PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           P FCINCVCPG+VKT++ YN+G LTVEEGAESPV LALL  GGPSG FF +KE + F
Sbjct: 483 PTFCINCVCPGFVKTDINYNSGILTVEEGAESPVRLALLPDGGPSGQFFLQKEVSEF 539

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541520|ref|XP_002511824.1| carbonyl reductase, putative [Ricinus communis] gi|223549004|gb|EEF50493.1| carbonyl reductase, putative [Ricinus communis]

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/295 (64%), Positives = 227/295 (76%), Gaps = 6/295 (2%)

Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIF 60
           AE A RYAVVTGANKGIG+ +  QLA NGI+ +LTARDE+ GLEAV+KLK SG  D V+F
Sbjct: 250 AEYAVRYAVVTGANKGIGFGICEQLASNGIVVILTARDERRGLEAVQKLKDSGLSDYVVF 309

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIE--EGVARG--- 115
           HQLDVA+ A I  +ADFI++ FGKLDILVNNAGI G+ +D D L       EG   G   
Sbjct: 310 HQLDVANTATIAVLADFIKAQFGKLDILVNNAGIGGVEADDDALRASFSSNEGAQFGWLE 369

Query: 116 KMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
            +T+TYE AE C+  NY GAKRM EAL PLLQLSDS RIVNVSSS+GKL  V++EWA  V
Sbjct: 370 LLTETYELAEACITVNYYGAKRMVEALFPLLQLSDSPRIVNVSSSMGKLKNVSNEWATQV 429

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
            SDA+ L+EER+DEVL +YL D+KEG+ +T GWPA  +AYILSKAAMNAYTRI+AK +P 
Sbjct: 430 LSDADKLSEERIDEVLGKYLTDFKEGTRKTNGWPALLSAYILSKAAMNAYTRIIAKNFPT 489

Query: 236 FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           F INCVCPG+VKT++ ++ G+L V+EGAESPV LALL   GPSG FF RKEE+ F
Sbjct: 490 FRINCVCPGHVKTDINFSTGKLPVKEGAESPVRLALLPNNGPSGCFFFRKEESPF 544

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745219|emb|CBI40299.3| unnamed protein product [Vitis vinifera]

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 195/295 (66%), Positives = 220/295 (74%), Gaps = 15/295 (5%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R AVVTGANKG+G E+ RQLA +G+  VLTARDEK G+EA++ L  SG  N++FHQLDV 
Sbjct: 12  RSAVVTGANKGMGLEICRQLAASGVRVVLTARDEKRGVEALQSLNGSGLSNLVFHQLDVG 71

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVA----------RG 115
           DPA+I S ADFI++ FGKLDILVNNAG++G I  D   L    E GVA           G
Sbjct: 72  DPASIASFADFIKTQFGKLDILVNNAGMSGSIVKDPVAL----ESGVAATEIREQVNWHG 127

Query: 116 KMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
            MTQ  E AE+C++ NY G KRM EA IPLLQLSDS RIVNVSSSLGKL  VT+EWAK V
Sbjct: 128 IMTQPLELAEECVKINYYGPKRMAEAFIPLLQLSDSPRIVNVSSSLGKLQNVTNEWAKAV 187

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
            SDAENLTEERVDEVL+Q+L D++EG  E K W A  AAY +SKAA+NAYTRILA KYP 
Sbjct: 188 LSDAENLTEERVDEVLNQFLKDFEEGLLEAKNWSAFYAAYTVSKAALNAYTRILATKYPA 247

Query: 236 FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           FCINCVCPGYVKT+   N G LTVEEGAE PV LALL  GGPSG FFSRKE T F
Sbjct: 248 FCINCVCPGYVKTDFNDNIGILTVEEGAECPVKLALLPDGGPSGHFFSRKEVTEF 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224144319|ref|XP_002336130.1| predicted protein [Populus trichocarpa] gi|222873486|gb|EEF10617.1| predicted protein [Populus trichocarpa]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/290 (64%), Positives = 226/290 (77%), Gaps = 6/290 (2%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLD 64
           RYAVVTGANKGIGYE+ RQLA NGI+ VLTARDEK GLEAV+KLK SG   D VI+HQLD
Sbjct: 1   RYAVVTGANKGIGYEICRQLASNGILVVLTARDEKRGLEAVQKLKDSGISDDLVIYHQLD 60

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEG----VARGKMTQT 120
           V DP +I S+A+F++++FGKLDILVNNAGI G++ +AD      E+     V     TQ 
Sbjct: 61  VVDPDSIVSLAEFVKNNFGKLDILVNNAGIGGVALEADACQRAFEQSGEFQVWAEIGTQN 120

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           YE AE+C++TNY GA+ M EAL PLLQLSDS RIVNVSS +G L  + +EWAKGVFSD +
Sbjct: 121 YEMAEQCVKTNYYGARGMAEALAPLLQLSDSPRIVNVSSLVGLLKNIPNEWAKGVFSDVD 180

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC 240
             TEER+DE+LS +L D+KE S ETKGWPA  +AY+LSKAA+NA+TRILAKKYPNFCINC
Sbjct: 181 TFTEERIDELLSVFLKDFKEDSLETKGWPALLSAYVLSKAALNAHTRILAKKYPNFCINC 240

Query: 241 VCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
           +CPG+VKT+M+ N G L+V+E AE PV LALL  GGPSGLFF   + + F
Sbjct: 241 ICPGFVKTDMSNNTGTLSVDEAAEYPVKLALLPDGGPSGLFFILDKLSCF 290

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	290
TAIR|locus:2198230	295	AT1G01800 [Arabidopsis thalian	0.979	0.962	0.594	2.1e-84
UNIPROTKB|Q6WAU1	314	Q6WAU1 "(-)-isopiperitenone re	0.593	0.547	0.593	1.2e-79
TAIR|locus:2159188	316	AT5G61830 [Arabidopsis thalian	0.924	0.848	0.407	8.5e-49
TAIR|locus:2157408	314	AT5G51030 [Arabidopsis thalian	0.941	0.869	0.367	5e-44
MGI|MGI:1309992	277	Cbr3 "carbonyl reductase 3" [M	0.848	0.888	0.381	1.5e-37
RGD|1309728	277	Cbr3 "carbonyl reductase 3" [R	0.848	0.888	0.381	8e-37
UNIPROTKB|E2RGJ8	280	LOC480785 "Uncharacterized pro	0.9	0.932	0.367	2.1e-36
UNIPROTKB|F1SGX4	277	CBR3 "Uncharacterized protein"	0.837	0.877	0.385	2.1e-36
UNIPROTKB|L7N0B9	277	CBR3 "Uncharacterized protein"	0.848	0.888	0.370	2.2e-34
UNIPROTKB|O75828	277	CBR3 "Carbonyl reductase [NADP	0.844	0.884	0.362	2.9e-32

TAIR|locus:2198230 AT1G01800 [Arabidopsis thaliana (taxid:3702)]

 Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
 Identities = 173/291 (59%), Positives = 218/291 (74%)

Query:     7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK-HSGF-DNVI-FHQL 63
             R AVVTG+NKGIG+E+ RQLA NGI  VLTARDE  GL AV+KLK  +GF D  I FH L
Sbjct:     5 RVAVVTGSNKGIGFEICRQLANNGITVVLTARDENKGLAAVQKLKTENGFSDQAISFHPL 64

Query:    64 DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVAR---GK-MTQ 119
             DV++P  I S+A F+++ FGKLDILVNNAG+ G + + D L   I E  A     K M+ 
Sbjct:    65 DVSNPDTIASLAAFVKTRFGKLDILVNNAGVGGANVNVDVLKAQIAEAGAPTDISKIMSD 124

Query:   120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             TYE  E+C++TNY G KRMCEA+IPLLQ SDS RIV+++S++GKL  V++EWAKGV SDA
Sbjct:   125 TYEIVEECVKTNYYGVKRMCEAMIPLLQSSDSPRIVSIASTMGKLENVSNEWAKGVLSDA 184

Query:   180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN 239
             ENLTEE++DEV+++YL DYKEG+ + KGWP   + YILSKAA+ A TR+LAK++ +F IN
Sbjct:   185 ENLTEEKIDEVINEYLKDYKEGALQVKGWPTVMSGYILSKAAVIALTRVLAKRHKSFIIN 244

Query:   240 CVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
              VCPG+V TE+ +N G L+VEEGA SPV LAL+  G PSGLFF R   + F
Sbjct:   245 SVCPGFVNTEINFNTGILSVEEGAASPVKLALVPNGDPSGLFFDRANVSNF 295

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009505 "plant-type cell wall" evidence=IDA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|Q6WAU1 Q6WAU1 "(-)-isopiperitenone reductase" [Mentha x piperita (taxid:34256)]

 Score = 522 (188.8 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
 Identities = 102/172 (59%), Positives = 127/172 (73%)

Query:   113 ARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWA 172
             A G+M + +E A+ C+ TNY G KR+ +ALIPLLQLS S RIVNVSSS G L+ + +EWA
Sbjct:   136 ANGEMIEKFEGAKDCVVTNYYGPKRLTQALIPLLQLSPSPRIVNVSSSFGSLLLLWNEWA 195

Query:   173 KGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK 232
             KGV  D + LTEERVDEV+  +L D KEG  E   WP + AA  +SKAA+NAYT+I AKK
Sbjct:   196 KGVLGDEDRLTEERVDEVVEVFLKDIKEGKLEESQWPPHFAAERVSKAALNAYTKIAAKK 255

Query:   233 YPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSR 284
             YP+F IN +CPGY KT++T++AG L+V E A+ PV LALL  GGPSG FF R
Sbjct:   256 YPSFRINAICPGYAKTDITFHAGPLSVAEAAQVPVKLALLPDGGPSGCFFPR 307

GO:0031525 "menthol biosynthetic process" evidence=IDA

GO:0042214 "terpene metabolic process" evidence=IDA

GO:0052581 "(-)-isopiperitenone reductase activity" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

TAIR|locus:2159188 AT5G61830 [Arabidopsis thaliana (taxid:3702)]

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 123/302 (40%), Positives = 177/302 (58%)

Query:     4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS--GFDNVIFH 61
             + +  AVVTG+N+GIG+E+ RQLA++G+  VLTAR+   GLEAV+ L+H   G   V FH
Sbjct:    34 SCENVAVVTGSNRGIGFEIARQLAVHGLTVVLTARNVNAGLEAVKSLRHQEEGL-KVYFH 92

Query:    62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQT 120
             QLDV D ++I     +++  FG LDILVNNAG+   + SD                   T
Sbjct:    93 QLDVTDSSSIREFGCWLKQTFGGLDILVNNAGVNYNLGSD------------------NT 134

Query:   121 YESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGKLMYVTHEWA----KGV 175
              E AE  + TNY G K M +A+IPL++ S   AR+VNVSS LG++    +  A    +  
Sbjct:   135 VEFAETVISTNYQGTKNMTKAMIPLMRPSPHGARVVNVSSRLGRVNGRRNRLANVELRDQ 194

Query:   176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
              S  + LTEE +D  +S+++N  K+G+ E+ GWP     Y +SK A+NAYTR++AK+   
Sbjct:   195 LSSPDLLTEELIDRTVSKFINQVKDGTWESGGWPQTFTDYSMSKLAVNAYTRLMAKELER 254

Query:   236 ------FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLAL-LHKGGPSGLFFSRKEET 288
                     +N  CPG+VKT MT  AG +  E+ A++ VWL+L L +   +G FF+ + E 
Sbjct:   255 RGEEEKIYVNSFCPGWVKTAMTGYAGNMPPEDAADTGVWLSLVLSEEAVTGKFFAERREI 314

Query:   289 LF 290
              F
Sbjct:   315 NF 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2157408 AT5G51030 [Arabidopsis thaliana (taxid:3702)]

 Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
 Identities = 108/294 (36%), Positives = 173/294 (58%)

Query:     4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
             T++  AVVTGAN+GIG+E+VRQLA +G+  +LT+RDE  G+EA + L+  GF NV FH+L
Sbjct:    35 TSETVAVVTGANRGIGFEMVRQLAGHGLTVILTSRDENVGVEAAKILQEGGF-NVDFHRL 93

Query:    64 DVADPAAIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYE 122
             D+ D ++I    ++I+  +G +D+L+NNAG+   + SD       +E   +   ++  Y 
Sbjct:    94 DILDSSSIQEFCEWIKEKYGFIDVLINNAGVNYNVGSDNS-----VE--FSHMVISTNYY 146

Query:   123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
               +  +       +  C+    ++ ++  +R+  +     KL    +E  +    D ++L
Sbjct:   147 GTKNIINAMIPLMRHACQGA-RIVNVT--SRLGRLKGRHSKL---ENEDVRAKLMDVDSL 200

Query:   183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PN---F 236
             TEE VD+ +S++L   +EG+ E+ GWP +   Y +SK A+NAYTR+LAK+    P     
Sbjct:   201 TEEIVDKTVSEFLKQVEEGTWESGGWPHSFTDYSVSKMAVNAYTRVLAKELSERPEGEKI 260

Query:   237 CINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF 290
               NC CPG+VKT MT  AG ++ E+GA++ VWLALL     +G FF+ + E  F
Sbjct:   261 YANCFCPGWVKTAMTGYAGNVSAEDGADTGVWLALLPDQAITGKFFAERREISF 314

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

MGI|MGI:1309992 Cbr3 "carbonyl reductase 3" [Mus musculus (taxid:10090)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 106/278 (38%), Positives = 156/278 (56%)

Query:     4 TAKRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
             +  R A+VTGANKGIG+ + R L    +G + VLTARDE  G  AV++L+  G  +  FH
Sbjct:     3 SCSRVALVTGANKGIGFAITRDLCRKFSGDV-VLTARDEARGRAAVQQLQAEGL-SPRFH 60

Query:    62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
             QLD+ DP +I ++ DF+R  +G L++LVNNAGI     D       I+            
Sbjct:    61 QLDIDDPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDPTPFD--IQ------------ 106

Query:   122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG-KLMYVTHEWAKGVFSDAE 180
               AE  L+TN+   + +C  L+P+++     R+VN+SS  G K +    E  +  F   +
Sbjct:   107 --AEVTLKTNFFATRNVCTELLPIMK--PHGRVVNISSLQGLKALENCREDLQEKFR-CD 161

Query:   181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK------KYP 234
              LTE  + +++ +++ D K    E +GWP +A  Y +SK  +   TRILA+      K  
Sbjct:   162 TLTEVDLVDLMKKFVEDTKNEVHEREGWPDSA--YGVSKLGVTVLTRILARQLDEKRKAD 219

Query:   235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
                +N  CPG+VKT+M  + G  TVEEGAE+PV+LALL
Sbjct:   220 RILLNACCPGWVKTDMARDQGSRTVEEGAETPVYLALL 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000253 "3-keto sterol reductase activity" evidence=ISO

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0042376 "phylloquinone catabolic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070402 "NADPH binding" evidence=ISO

RGD|1309728 Cbr3 "carbonyl reductase 3" [Rattus norvegicus (taxid:10116)]

 Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
 Identities = 106/278 (38%), Positives = 155/278 (55%)

Query:     4 TAKRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
             +  R A+VTGANKGIG+ + R L    +G + VLTARDE  G  AV++L+  G  +  FH
Sbjct:     3 SCSRVALVTGANKGIGFAITRDLCRKFSGDV-VLTARDEARGRAAVKQLQAEGL-SPRFH 60

Query:    62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
             QLD+ +P +I ++ DF+R  +G L++LVNNAGI     D                 T   
Sbjct:    61 QLDIDNPQSIRALRDFLRKEYGGLNVLVNNAGIAFRMDDP----------------TPFD 104

Query:   122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG-KLMYVTHEWAKGVFSDAE 180
               AE  L+TN+   + +C  L+P+++     R+VNVSS  G K +    E  +  F   +
Sbjct:   105 VQAEVTLKTNFFATRNVCTELLPIMK--PHGRVVNVSSLQGLKALENCSEDLQERFR-CD 161

Query:   181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK------KYP 234
              LTE  + +++ +++ D K    E +GWP +A  Y +SK  +   TRILA+      K  
Sbjct:   162 TLTEGDLVDLMKKFVEDTKNEVHEREGWPDSA--YGVSKLGVTVLTRILARQLDEKRKAD 219

Query:   235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
                +N  CPG+VKT+M  + G  TVEEGAE+PV+LALL
Sbjct:   220 RILLNACCPGWVKTDMARDQGSRTVEEGAETPVYLALL 257

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=ISO;IDA

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IEA;ISO

GO:0042376 "phylloquinone catabolic process" evidence=IDA

GO:0070402 "NADPH binding" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|E2RGJ8 LOC480785 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 108/294 (36%), Positives = 159/294 (54%)

Query:     5 AKRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
             A R AVVTGANKG+G+ + R L  N  G + +LT+RDE  G  AV+ LK  G  +  FH 
Sbjct:     4 ALRVAVVTGANKGLGFAITRDLCRNFPGDV-ILTSRDEARGRAAVQHLKAEGL-SPRFHL 61

Query:    63 LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
             LD+ +  +I ++ DF+   +G LD+LVNNAGI     D                 T  + 
Sbjct:    62 LDIDNLQSIRALRDFLWEEYGGLDVLVNNAGIVFTPDDP----------------TPLHI 105

Query:   123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL-MYVTHEWAKGVFSDAEN 181
              AE  L+TN+ G + +C  L+PL++     R+VNVSS +  L +       +  F+ +E 
Sbjct:   106 QAEVTLKTNFFGTRDICTELLPLVK--PQGRVVNVSSIMSFLALKQCSPELQQKFT-SET 162

Query:   182 LTEERVDEVLSQYLNDYKEGSPETKGWP-ANAAAYILSKAAMNAYTRILAKKYPN----- 235
             +TEE +  +++++L D K G  + +GWP    AAY +SK  +   +RI A+K        
Sbjct:   163 ITEEELGMLMNKFLEDVKNGVHKKEGWPDIKIAAYSVSKMGVTVLSRIHARKLSEQRRDD 222

Query:   236 -FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRKE 286
                +N  CPG+V+T+M    G  + EEGAE+PV+LALL     GP G F   K+
Sbjct:   223 KILLNACCPGWVRTDMGGPKGIKSPEEGAETPVYLALLPSDAEGPHGEFVMEKK 276

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1SGX4 CBR3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 106/275 (38%), Positives = 156/275 (56%)

Query:     7 RYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
             R A+VTGANKGIG+ + R L    +G + VLT+RD   G  AV++L+  G  +  FHQLD
Sbjct:     6 RVALVTGANKGIGFAIARDLCRQFSGDV-VLTSRDAARGRAAVQQLQAEGL-SPRFHQLD 63

Query:    65 VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
             + D  +I ++ DF+R  +G L++LVNNAGI     D       I+              A
Sbjct:    64 IDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKIDDPTPFD--IQ--------------A 107

Query:   125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG-KLMYVTHEWAKGVFSDAENLT 183
             E  L+TN+ G + +C  L+P+++     R+VN+SS LG K +    E  +  F   E LT
Sbjct:   108 EMTLKTNFFGTRNVCIELLPIIK--PHGRVVNISSLLGSKALENCSEDLQEKFR-CEALT 164

Query:   184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA------KKYPNFC 237
             EE + +++ +++ D K    E +GWP++A  Y +SK  +   +RILA      +K     
Sbjct:   165 EEDLVDLMKKFVEDAKNEVHEREGWPSSA--YGVSKLGVTVLSRILAQRLDEKRKADRIL 222

Query:   238 INCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
             +N  CPG+VKT+MT   G  TVEEGA +PV+LALL
Sbjct:   223 LNACCPGWVKTDMTGGQGFETVEEGAVTPVYLALL 257

GO:0070402 "NADPH binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

UNIPROTKB|L7N0B9 CBR3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
 Identities = 103/278 (37%), Positives = 154/278 (55%)

Query:     4 TAKRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
             +  R A+VTGAN+GIG+ + R+L    +G + VLTARDE  G  AV++L+  G  +  FH
Sbjct:     3 SCSRVALVTGANRGIGFAIARELCRQFSGDV-VLTARDEARGRAAVQQLQAEGL-SPRFH 60

Query:    62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
              LD+ D  +I ++ DF+R  +G L++LVNNAGI     D       I+            
Sbjct:    61 LLDIDDLQSIRALRDFLRKEYGGLNVLVNNAGIAFKPDDPTPFD--IQ------------ 106

Query:   122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG-KLMYVTHEWAKGVFSDAE 180
               AE  L+TN+   + +C  L+P+++     R+VN+SS  G K +       +  F   E
Sbjct:   107 --AEITLKTNFFATRNVCNELLPIIK--PHGRVVNISSLEGSKALENCSADLQKKFQ-CE 161

Query:   181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA------KKYP 234
              LTEE + +++ +++ D      E +GWP N+A Y +SK  +   +RILA      +K  
Sbjct:   162 TLTEEDLVDLMKKFVEDTSNEVHEREGWP-NSA-YGVSKLGVTVLSRILAWRLDEKRKVD 219

Query:   235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
                +N  CPG+VKT+M    G  TVEEGAE+PV+LALL
Sbjct:   220 RILLNACCPGWVKTDMGGPYGPRTVEEGAETPVYLALL 257

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|O75828 CBR3 "Carbonyl reductase [NADPH] 3" [Homo sapiens (taxid:9606)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 101/279 (36%), Positives = 152/279 (54%)

Query:     4 TAKRYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
             +  R A+VTGAN+GIG  + R+L    +G + VLTARD   G  AV++L+  G  +  FH
Sbjct:     3 SCSRVALVTGANRGIGLAIARELCRQFSGDV-VLTARDVARGQAAVQQLQAEGL-SPRFH 60

Query:    62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
             QLD+ D  +I ++ DF+R  +G L++LVNNA +    SD D +   I+            
Sbjct:    61 QLDIDDLQSIRALRDFLRKEYGGLNVLVNNAAVA-FKSD-DPMPFDIK------------ 106

Query:   122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDA 179
               AE  L+TN+   + MC  L+P+++     R+VN+SS   L      + +  +   S  
Sbjct:   107 --AEMTLKTNFFATRNMCNELLPIMK--PHGRVVNISSLQCLRAFENCSEDLQERFHS-- 160

Query:   180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK------KY 233
             E LTE  + +++ +++ D K    E +GWP N+  Y +SK  +   +RILA+      K 
Sbjct:   161 ETLTEGDLVDLMKKFVEDTKNEVHEREGWP-NSP-YGVSKLGVTVLSRILARRLDEKRKA 218

Query:   234 PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
                 +N  CPG VKT+M       TVEEGAE+PV+LALL
Sbjct:   219 DRILVNACCPGPVKTDMDGKDSIRTVEEGAETPVYLALL 257

GO:0000253 "3-keto sterol reductase activity" evidence=IEA

GO:0042376 "phylloquinone catabolic process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0070402 "NADPH binding" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P16152	CBR1_HUMAN	1, ., 1, ., 1, ., 1, 8, 9	0.3667	0.8724	0.9133	yes	no
Q6WAU1	IPIPR_MENPI	1, ., 3, ., 1, ., 8, 2	0.5357	0.9758	0.9012	N/A	no
A4UHT7	SALR_PAPBR	1, ., 1, ., 1, ., 2, 4, 8	0.5430	0.9896	0.9228	N/A	no
Q9M2E2	SDR1_ARATH	1, ., 1, ., 1, ., 2, 0, 8	0.6047	1.0	0.9797	yes	no
Q5RCU5	CBR1_PONAB	1, ., 1, ., 1, ., 1, 8, 9	0.3667	0.8724	0.9133	yes	no
B2X050	MNR1_CAPAN	1, ., 1, ., 1, ., 2, 0, 8	0.5414	1.0	0.9235	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.189	LOW CONFIDENCE prediction!
3rd Layer	1.3.1.58	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00026774001 SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (297 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	290
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-86
cd05233	234	cd05233, SDR_c, classical (c) SDRs	3e-41
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-38
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	5e-36
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-32
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-32
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	8e-32
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-31
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-30
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-27
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-27
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-24
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-24
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	5e-24
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-24
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-23
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-23
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-22
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-22
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	6e-22
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	9e-22
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-21
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-20
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-20
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-20
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	5e-20
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	6e-20
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	7e-20
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-19
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-19
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-19
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-19
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	5e-19
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	8e-19
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-18
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-18
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	2e-18
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	3e-18
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	4e-18
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-18
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-17
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-17
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	2e-17
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	3e-17
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	3e-17
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	4e-17
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	5e-17
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	7e-17
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	8e-17
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	1e-16
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-16
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-16
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-16
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-16
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-16
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-16
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-16
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	7e-16
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	2e-15
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-15
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-15
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-15
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-15
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	8e-15
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	9e-15
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-14
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-14
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-14
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-14
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-14
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-14
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-14
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	3e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	3e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	4e-14
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-14
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	6e-14
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	7e-14
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	7e-14
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	9e-14
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-14
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	1e-13
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-13
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-13
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	1e-13
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-13
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-13
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-13
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	2e-13
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-13
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	3e-13
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	3e-13
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	3e-13
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	5e-13
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	6e-13
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	6e-13
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	7e-13
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	9e-13
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-12
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	1e-12
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-12
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-12
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-12
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-12
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	4e-12
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	5e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	6e-12
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	7e-12
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	7e-12
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	8e-12
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-12
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	8e-12
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	8e-12
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	8e-12
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-11
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-11
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	1e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-11
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-11
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	2e-11
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-11
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-11
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-11
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-11
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	3e-11
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-11
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	3e-11
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-11
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	4e-11
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	5e-11
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	6e-11
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	7e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	8e-11
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	9e-11
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-10
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	3e-10
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-10
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	4e-10
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	4e-10
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	5e-10
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-10
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-10
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	9e-10
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-09
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	1e-09
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-09
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	2e-09
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-09
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	3e-09
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	4e-09
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-09
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	4e-09
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	4e-09
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-09
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	9e-09
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	9e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-08
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-08
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-08
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-08
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-08
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-08
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-08
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	3e-08
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	3e-08
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	3e-08
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-08
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	4e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	4e-08
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-08
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	5e-08
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	6e-08
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	6e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	1e-07
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-07
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-07
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-07
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	2e-07
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-07
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	3e-07
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-07
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-07
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	3e-07
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-07
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	6e-07
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	1e-06
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	1e-06
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-06
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	1e-06
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-06
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-06
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-06
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	3e-06
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-06
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	7e-06
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	8e-06
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	9e-06
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-05
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	1e-05
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	1e-05
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-05
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-05
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	2e-05
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	2e-05
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-05
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	4e-05
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-05
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-05
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	5e-05
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-05
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	6e-05
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	7e-05
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	7e-05
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	8e-05
pfam08659	181	pfam08659, KR, KR domain	1e-04
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	1e-04
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-04
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-04
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-04
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	3e-04
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	5e-04
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-04
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	6e-04
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	8e-04
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	0.001
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	0.001
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	0.002
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	0.002
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	0.002
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	0.002
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	0.002
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	0.002
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	0.003
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.003
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	0.003
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	0.003
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	0.004
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.004
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  256 bits (657), Expect = 3e-86
 Identities = 119/285 (41%), Positives = 152/285 (53%), Gaps = 67/285 (23%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITV-LTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGAN+GIG+E+VRQLA +G  TV LTARD + G  AVEKL+  G  +V FHQLDV
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGL-SVRFHQLDV 59

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D A+I + ADF+   +G LDILVNNAGI     D  T                T E A 
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDST---------------PTREQAR 104

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + ++TN+ G   + +AL+PLL+ S + RIVNVSS LG L                     
Sbjct: 105 ETMKTNFFGTVDVTQALLPLLKKSPAGRIVNVSSGLGSL--------------------- 143

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP 243
                                      +AY +SKAA+NA TRILAK+       +N  CP
Sbjct: 144 --------------------------TSAYGVSKAALNALTRILAKELKETGIKVNACCP 177

Query: 244 GYVKTEMTYNAGRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEE 287
           G+VKT+M       T EEGAE+PV+LALL   G P+G FFS K+ 
Sbjct: 178 GWVKTDMGGGKAPKTPEEGAETPVYLALLPPDGEPTGKFFSDKKV 222

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  142 bits (359), Expect = 3e-41
 Identities = 80/289 (27%), Positives = 108/289 (37%), Gaps = 79/289 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA+ GIG  + R+LA  G   VL  R+E+   E        G  N +  Q DV+D 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGG--NAVAVQADVSDE 58

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + ++ +     FG+LDILVNNAGI       +                 T E  ++ L
Sbjct: 59  EDVEALVEEALEEFGRLDILVNNAGIARPGPLEEL----------------TDEDWDRVL 102

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G   +  A +P ++     RIVN+SS  G                          
Sbjct: 103 DVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAGL------------------------- 137

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                            +  P   AAY  SKAA+   TR LA +       +N V PG V
Sbjct: 138 -----------------RPLP-GQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLV 179

Query: 247 KTEMTYNA---------------GRL-TVEEGAESPVWLALLHKGGPSG 279
            T M                   GRL T EE AE+ V+LA       +G
Sbjct: 180 DTPMLAKLGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITG 228

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  136 bits (345), Expect = 1e-38
 Identities = 84/299 (28%), Positives = 128/299 (42%), Gaps = 72/299 (24%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL-KHSGFDNVIFHQLD 64
            +  V+TGAN GIG E  R+LA  G   ++  R+E+ G EA  ++ K +G   V   QLD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGI----TGISSDADTLSGFIEEGVARGKMTQT 120
           ++  A++   A+   + F +LDIL+NNAGI      ++ D     GF             
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKD-----GF------------- 102

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
               E     NYLG   +   L+P+L+ S  +RIVNVSS         H      F+D +
Sbjct: 103 ----ELQFAVNYLGHFLLTNLLLPVLKASAPSRIVNVSSI-------AHRAGPIDFNDLD 151

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI 238
                                  E     +   AY  SK A   +TR LA++       +
Sbjct: 152 L----------------------ENNKEYSPYKAYGQSKLANILFTRELARRLEGTGVTV 189

Query: 239 NCVCPGYVKTEMTYNAG-------------RLTVEEGAESPVWLALLHK-GGPSGLFFS 283
           N + PG V+TE+    G             + + E+GA++ ++ A   +  G SG +FS
Sbjct: 190 NALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSPEQGAQTALYAATSPELEGVSGKYFS 248

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  129 bits (325), Expect = 5e-36
 Identities = 73/265 (27%), Positives = 105/265 (39%), Gaps = 66/265 (24%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQ 62
           + + A+VTGA+ GIG  + R LA  G  + V   R E+   EA+   +K +G        
Sbjct: 4   SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVA 63

Query: 63  LDVAD-PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
            DV+D   ++ ++       FG++DILVNNAGI G  +  + L               T 
Sbjct: 64  ADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEEL---------------TE 108

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           E  ++ +  N LGA  +  A +PL++     RIVN+SS  G                   
Sbjct: 109 EDWDRVIDVNLLGAFLLTRAALPLMK---KQRIVNISSVAG------------------- 146

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--N 239
                                    G P   AAY  SKAA+   T+ LA +     I  N
Sbjct: 147 ------------------------LGGPPGQAAYAASKAALIGLTKALALELAPRGIRVN 182

Query: 240 CVCPGYVKTEMTYNAGRLTVEEGAE 264
            V PGY+ T MT       +E    
Sbjct: 183 AVAPGYIDTPMTAALESAELEALKR 207

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  119 bits (302), Expect = 1e-32
 Identities = 72/247 (29%), Positives = 114/247 (46%), Gaps = 62/247 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +  +LA  G    +T R E+   E VE++K  G  N    + DV+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGG-NAAALEADVS 59

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A+ ++ + + + FG +DILVNNAGIT      D L   +       +M++  E  + 
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGIT-----RDNL--LM-------RMSE--EDWDA 103

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G   + +A+I  +    S RI+N+SS +G +                      
Sbjct: 104 VINVNLTGVFNVTQAVIRAMIKRRSGRIINISSVVGLI---------------------- 141

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                         G+P   G  AN AA   SKA +  +T+ LAK+       +N V PG
Sbjct: 142 --------------GNP---G-QANYAA---SKAGVIGFTKSLAKELASRGITVNAVAPG 180

Query: 245 YVKTEMT 251
           ++ T+MT
Sbjct: 181 FIDTDMT 187

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 2e-32
 Identities = 62/257 (24%), Positives = 88/257 (34%), Gaps = 64/257 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
            +  A + A+VTGA +G+G      LA  G              E    L+ +G      
Sbjct: 2   ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR-AHA 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              D+ADPA++    D   +  G LD LVNNAGIT   S  +                  
Sbjct: 61  IAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATEL----------------D 104

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            ++ +  +  N  G   M  A +P L+ S   RIVN++S                     
Sbjct: 105 IDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASD-------------------- 144

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPA-NAAAYILSKAAMNAYTRILAKKY--PNFC 237
                                   T  W A    AY+ SK A+   TR LA++       
Sbjct: 145 ------------------------TALWGAPKLGAYVASKGAVIGMTRSLARELGGRGIT 180

Query: 238 INCVCPGYVKTEMTYNA 254
           +N + PG   TE T   
Sbjct: 181 VNAIAPGLTATEATAYV 197

Length = 250

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  118 bits (297), Expect = 8e-32
 Identities = 63/247 (25%), Positives = 93/247 (37%), Gaps = 65/247 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TG + GIG  +   LA  G   + TAR+     + +E L     DN+   +LDV 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARN----PDKLESLGELLNDNLEVLELDVT 56

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  +I +    +   FG++D+LVNNAG          L G +EE         + E   +
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGY--------GLFGPLEE--------TSIEEVRE 100

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N  G  R+  A +PL++   S RIVNVSS  G +                      
Sbjct: 101 LFEVNVFGPLRVTRAFLPLMRKQGSGRIVNVSSVAGLV---------------------- 138

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC--PG 244
                                 P     Y  SKAA+ A +  L  +   F I      PG
Sbjct: 139 --------------------PTPFL-GPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177

Query: 245 YVKTEMT 251
            V+T   
Sbjct: 178 PVRTGFA 184

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score =  117 bits (294), Expect = 1e-31
 Identities = 77/292 (26%), Positives = 112/292 (38%), Gaps = 72/292 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVL-TARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            ++TGA++GIG E+VRQL   G  TV+ T RD       +  L  +    +   +LDV D
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRD-PSAATELAALG-ASHSRLHILELDVTD 58

Query: 68  PAAIHSVADFIRSHFG--KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
              I   A+ +    G   LD+L+NNAGI      A  +                 E   
Sbjct: 59  E--IAESAEAVAERLGDAGLDVLINNAGILHSYGPASEV---------------DSEDLL 101

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           +  Q N LG   + +A +PLL     A+I+N+SS +G              S  +N    
Sbjct: 102 EVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVG--------------SIGDN---- 143

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV--CP 243
                       Y               +Y  SKAA+N  T+ LA +     I  V   P
Sbjct: 144 -------TSGGWY---------------SYRASKAALNMLTKSLAVELKRDGITVVSLHP 181

Query: 244 GYVKTEMT----YNAGRLTVEEGAESPVWLALLHKGGP--SGLFFSRKEETL 289
           G+V+T+M      N G +T EE       L ++       SG F       +
Sbjct: 182 GWVRTDMGGPFAKNKGPITPEESVAG--LLKVIDNLNEEDSGKFLDYDGTEI 231

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  114 bits (287), Expect = 2e-30
 Identities = 73/286 (25%), Positives = 112/286 (39%), Gaps = 78/286 (27%)

Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
               + A+VTGA++GIG  +  +LA  G  + +  A  E G    V ++   G    +  
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGK-ALAV 60

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
           Q DV+D  ++    D  ++ FG +DILVNNAGIT      D L            M    
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT-----RDNLL-----------MRMKE 104

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           E  ++ + TN  G   + +A+   +    S RI+N+SS +G                   
Sbjct: 105 EDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG------------------- 145

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCIN 239
                                    G P   A Y  SKA +  +T+ LA++       +N
Sbjct: 146 -----------------------LMGNP-GQANYAASKAGVIGFTKSLARELASRGITVN 181

Query: 240 CVCPGYVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
            V PG+++T+MT                 GRL   EE A +  +LA
Sbjct: 182 AVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLA 227

Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  105 bits (265), Expect = 3e-27
 Identities = 62/245 (25%), Positives = 97/245 (39%), Gaps = 62/245 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA++GIG  +  +LA +G   V+   +E+       +L+ +G         DV+D 
Sbjct: 8   ALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-GEARVLVFDVSDE 66

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           AA+ ++ +     FG LDILVNNAGIT    DA                  + E  ++ +
Sbjct: 67  AAVRALIEAAVEAFGALDILVNNAGITR---DALL-------------PRMSEEDWDRVI 110

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G   +  A +P +  +   RIVN+SS  G                          
Sbjct: 111 DVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG-------------------------- 144

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK--KYPNFCINCVCPGYV 246
                       G+P           Y  +KA +  +T+ LA         +N V PG++
Sbjct: 145 ----------VTGNP-------GQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFI 187

Query: 247 KTEMT 251
            T+MT
Sbjct: 188 DTDMT 192

Length = 246

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  104 bits (263), Expect = 5e-27
 Identities = 73/246 (29%), Positives = 111/246 (45%), Gaps = 63/246 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTGA++GIG  +  +LA  G   ++T    E+G  E VE+LK  G   +     DV+D
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGV-VCDVSD 59

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              + +V + I    G +DILVNNAGIT      D L   +       +M +  E  +  
Sbjct: 60  REDVKAVVEEIEEELGPIDILVNNAGIT-----RDNL--LM-------RMKE--EDWDAV 103

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           + TN  G   + +A++ ++    S RI+N+SS +G LM                      
Sbjct: 104 IDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVG-LM---------------------- 140

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
                        G+       AN AA   SKA +  +T+ LAK+    N  +N V PG+
Sbjct: 141 -------------GNAGQ----ANYAA---SKAGVIGFTKSLAKELASRNITVNAVAPGF 180

Query: 246 VKTEMT 251
           + T+MT
Sbjct: 181 IDTDMT 186

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  101 bits (254), Expect = 1e-25
 Identities = 66/248 (26%), Positives = 96/248 (38%), Gaps = 63/248 (25%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVL-TARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
            + A+VTGA+ GIG  +   LA  G   V+    +E+   E +E++K  G D  I  + D
Sbjct: 5   GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGD-AIAVKAD 63

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V+    + ++ + I   FGK+DILVNNAGI+      D                 T E  
Sbjct: 64  VSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTD----------------MTDEEW 107

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           ++ +  N  G   +    +P +    S  IVN+SS  G                   L  
Sbjct: 108 DRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWG-------------------LIG 148

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                         Y  SK A+NA+T+ LAK+     I  N V 
Sbjct: 149 AS------------------------CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVA 184

Query: 243 PGYVKTEM 250
           PG + TEM
Sbjct: 185 PGAIDTEM 192

Length = 247

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 98.9 bits (247), Expect = 2e-24
 Identities = 58/257 (22%), Positives = 97/257 (37%), Gaps = 61/257 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 + A++TGA+ GIG E+ +QLA  G   +L AR E       ++L+      V  
Sbjct: 1   PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEV 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              D++DP A+  + D ++   G +D+LVNNAG  G       LS               
Sbjct: 61  IPADLSDPEALERLEDELKERGGPIDVLVNNAGF-GTFGPFLELS--------------- 104

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            +  E+ +Q N L   R+ +A++P +    +  I+N+ S+ G                  
Sbjct: 105 LDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGL----------------- 147

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN- 239
                                 P         A Y  +KA + +++  L ++     +  
Sbjct: 148 ---------------------IPT-----PYMAVYSATKAFVLSFSEALREELKGTGVKV 181

Query: 240 -CVCPGYVKTEMTYNAG 255
             VCPG  +TE     G
Sbjct: 182 TAVCPGPTRTEFFDAKG 198

Length = 265

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.0 bits (245), Expect = 3e-24
 Identities = 63/248 (25%), Positives = 96/248 (38%), Gaps = 63/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           R A+VTGA +G+G  +  +LA  G  + V    DE+   E VE ++  G       Q DV
Sbjct: 7   RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALG-RRAQAVQADV 65

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D AA+ +        FG++DILVNNAGI     +   L+   ++               
Sbjct: 66  TDKAALEAAVAAAVERFGRIDILVNNAGIF----EDKPLADMSDDEWDE----------- 110

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             +  N  G   +  A++P ++     RIVN+SS  G                       
Sbjct: 111 -VIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL---------------------- 147

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                GWP   + Y  +KA +   T+ LA++   + I  N V P
Sbjct: 148 --------------------PGWPGR-SNYAAAKAGLVGLTKALARELAEYGITVNMVAP 186

Query: 244 GYVKTEMT 251
           G + T+M 
Sbjct: 187 GDIDTDMK 194

Length = 249

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 97.7 bits (244), Expect = 5e-24
 Identities = 66/249 (26%), Positives = 92/249 (36%), Gaps = 65/249 (26%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           ++TGA+ GIG E+   LA  G   VL+AR E+   E   +    G  +     LD++D  
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPLDMSDLE 66

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
               V +     FG LDIL+NNAGI  + S     S                +   K ++
Sbjct: 67  DAEQVVEEALKLFGGLDILINNAGI-SMRSLFHDTS---------------IDVDRKIME 110

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDE 189
            NY G   + +A +P L       IV VSS  GK+                         
Sbjct: 111 VNYFGPVALTKAALPHLIERSQGSIVVVSSIAGKI------------------------- 145

Query: 190 VLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAY---TRI-LAKKYPNFCINCVCPGY 245
                      G P          AY  SK A+  +    R  L+   PN  +  VCPG 
Sbjct: 146 -----------GVPFR-------TAYAASKHALQGFFDSLRAELS--EPNISVTVVCPGL 185

Query: 246 VKTEMTYNA 254
           + T +  NA
Sbjct: 186 IDTNIAMNA 194

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 96.4 bits (241), Expect = 9e-24
 Identities = 55/245 (22%), Positives = 82/245 (33%), Gaps = 62/245 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA+ GIG  + R+ A  G   V+T R+E+       ++   G    I    DV+D 
Sbjct: 8   AIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG--RAIAVAADVSDE 65

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A + +        FG +DILVNNAG T                     +       ++  
Sbjct: 66  ADVEAAVAAALERFGSVDILVNNAGTT---------------HRNGPLLDVDEAEFDRIF 110

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N        +A +P ++      IVNV+S+ G                          
Sbjct: 111 AVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAG-------------------------- 144

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                         P           Y  SK A+   T+ LA +     I  N V P  V
Sbjct: 145 ------------LRPR-----PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVV 187

Query: 247 KTEMT 251
           +T + 
Sbjct: 188 ETGLL 192

Length = 251

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 95.0 bits (237), Expect = 3e-23
 Identities = 73/262 (27%), Positives = 106/262 (40%), Gaps = 65/262 (24%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  + ++LA +G   V+  A  +    E V +++ +G    I  Q DV
Sbjct: 4   KVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGK-AIAVQADV 62

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +DP+ +  + D     FG +DILVNNAG+         L   I E         + E  +
Sbjct: 63  SDPSQVARLFDAAEKAFGGVDILVNNAGV--------MLKKPIAE--------TSEEEFD 106

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           +    N  GA  + +      +L D  RI+N+SSSL                        
Sbjct: 107 RMFTVNTKGAFFVLQEAAK--RLRDGGRIINISSSLTAAYT------------------- 145

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                    N  AY  SKAA+ A+TR+LAK+     I  N V P
Sbjct: 146 ------------------------PNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAP 181

Query: 244 GYVKTEMTYNAGRLTVEEGAES 265
           G V T+M Y        EG   
Sbjct: 182 GPVDTDMFYAGKTEEAVEGYAK 203

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 94.8 bits (236), Expect = 4e-23
 Identities = 70/262 (26%), Positives = 94/262 (35%), Gaps = 67/262 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG  +G+G    R L   G   VL+   ++ G  A  +L     D   F  LDV D 
Sbjct: 8   AIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELG----DAARFFHLDVTDE 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
               +V D  R  FG+LD+LVNNAGI           G +E          T E   + L
Sbjct: 64  DGWTAVVDTAREAFGRLDVLVNNAGI--------LTGGTVETT--------TLEEWRRLL 107

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G      A+IP ++ +    I+N+SS  G L+                       
Sbjct: 108 DINLTGVFLGTRAVIPPMKEAGGGSIINMSSIEG-LV----------------------- 143

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI----LAKKYPNFCINCVCPG 244
                       G P         AAY  SK A+   T+      A +     +N V PG
Sbjct: 144 ------------GDP-------ALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVHPG 184

Query: 245 YVKTEMTYNAGRLTVEEGAESP 266
           Y+ T MT        E G    
Sbjct: 185 YIYTPMTDELLIAQGEMGNYPN 206

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 92.7 bits (231), Expect = 3e-22
 Identities = 67/257 (26%), Positives = 96/257 (37%), Gaps = 61/257 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
             +   R A+VTGA +GIG  +  +LA +G   ++            E ++ +G      
Sbjct: 1   TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-GKARA 59

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q+DV D AA+ +        FG+LDILV NAGI  ++  A+              M   
Sbjct: 60  RQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAE--------------MDD- 104

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  E+ +  N  G   + +A +P L  +   RIV  SS  G  +               
Sbjct: 105 -EQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV--------------- 148

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                     G+P   A Y  SKA +  +TR LA +     I  
Sbjct: 149 --------------------------GYPGL-AHYAASKAGLVGFTRALALELAARNITV 181

Query: 239 NCVCPGYVKTEMTYNAG 255
           N V PG V T M  N G
Sbjct: 182 NSVHPGGVDTPMAGNLG 198

Length = 251

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 92.3 bits (230), Expect = 3e-22
 Identities = 53/188 (28%), Positives = 77/188 (40%), Gaps = 31/188 (16%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVI 59
           M     + A++TGA+ GIG    R LA  G   VL AR E    E +E L    G    +
Sbjct: 1   MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARRE----ERLEALADEIGAGAAL 56

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
              LDV D AA+ +  + +   FG++DILVNNA                  G+A G    
Sbjct: 57  ALALDVTDRAAVEAAIEALPEEFGRIDILVNNA------------------GLALGDPLD 98

Query: 120 TYESAE--KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTH------EW 171
             +  +  + + TN  G      A++P +    S  I+N+ S  G+  Y         + 
Sbjct: 99  EADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKA 158

Query: 172 AKGVFSDA 179
           A   FS  
Sbjct: 159 AVRAFSLG 166

Length = 246

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 91.6 bits (228), Expect = 6e-22
 Identities = 65/285 (22%), Positives = 99/285 (34%), Gaps = 66/285 (23%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VT A+ GIG  + R LA  G    + AR+ +  LE       +G   V+    D+ 
Sbjct: 2   KVALVTAASSGIGLAIARALAREGARVAICARNRE-NLERAASELRAGGAGVLAVVADLT 60

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK-MTQTYESAE 125
           DP  I  + +     FG++DILVNNAG                 G   G     T E   
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAG-----------------GPPPGPFAELTDEDWL 103

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           +      L   R+  A++P ++     RIVN+SS   K                      
Sbjct: 104 EAFDLKLLSVIRIVRAVLPGMKERGWGRIVNISSLTVK---------------------- 141

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                            PE     +N A     +A +    + L+++       +N V P
Sbjct: 142 ----------------EPEPNLVLSNVA-----RAGLIGLVKTLSRELAPDGVTVNSVLP 180

Query: 244 GYVKTE-MTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE 287
           GY+ TE +         +EG         +    P G    + EE
Sbjct: 181 GYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLG-RVGKPEE 224

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 90.5 bits (225), Expect = 9e-22
 Identities = 62/247 (25%), Positives = 93/247 (37%), Gaps = 66/247 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG E+ R LA +G    L  R+     E +  L  SG  +V     D  
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNP----EDLAALSASG-GDVEAVPYDAR 55

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DP    ++ D +R  FG++D+LV+NA   GI        G             +    E 
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNA---GIGRPTTLREG-------------SDAELEA 99

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N +    +  AL+P L+ + S R+V ++S  GK                       
Sbjct: 100 HFSINVIAPAELTRALLPALREAGSGRVVFLNSLSGKR---VL----------------- 139

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC--VCPG 244
                                  A  A Y  SK A+ A    L ++  +  +    VCPG
Sbjct: 140 -----------------------AGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176

Query: 245 YVKTEMT 251
           +V T M 
Sbjct: 177 FVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 90.6 bits (225), Expect = 2e-21
 Identities = 61/249 (24%), Positives = 94/249 (37%), Gaps = 64/249 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL--D 64
           + A++TGA+KGIG  + R+    G   ++ ARD    L          F     H L  D
Sbjct: 10  QTALITGASKGIGLAIAREFLGLGADVLIVARDADA-LAQARDELAEEFPEREVHGLAAD 68

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V+D     ++ D++  H+  L ILVNNAG                  + +  +  T +  
Sbjct: 69  VSDDEDRRAILDWVEDHWDGLHILVNNAGGN----------------IRKAAIDYTEDEW 112

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
               +TN   A  +     PLL+   S+ IVN+ S  G                      
Sbjct: 113 RGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG---------------------- 150

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                     L   + G+P           Y ++KAA+   TR LA ++    I  N V 
Sbjct: 151 ----------LTHVRSGAP-----------YGMTKAALLQMTRNLAVEWAEDGIRVNAVA 189

Query: 243 PGYVKTEMT 251
           P Y++T +T
Sbjct: 190 PWYIRTPLT 198

Length = 257

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 87.7 bits (218), Expect = 2e-20
 Identities = 57/268 (21%), Positives = 91/268 (33%), Gaps = 78/268 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG   GIG  +  + A  G   V+   +EKG  E    ++ +G   V +++ DV+  
Sbjct: 2   VLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAG-GKVHYYKCDVSKR 60

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK--MTQTYESAEK 126
             ++  A  I+   G + IL+NNA                  GV  GK  +    E  EK
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNA------------------GVVSGKKLLELPDEEIEK 102

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N L      +A +P +   +   IV ++S  G +                      
Sbjct: 103 TFEVNTLAHFWTTKAFLPDMLERNHGHIVTIASVAGLIS--------------------- 141

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAM----NAYTR-ILAKKYPNFCINCV 241
                                 PA  A Y  SKAA      +    + A   P      V
Sbjct: 142 ----------------------PAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179

Query: 242 CPGYVKTEMTYNAGRLTVEEGAESPVWL 269
           CP ++ T M          +G ++P  L
Sbjct: 180 CPYFINTGMF---------QGVKTPRPL 198

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 85.3 bits (212), Expect = 2e-20
 Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 24/159 (15%)

Query: 9   AVVTGANKGIGYEVVRQLALNGI-ITVLTARDE--KGGLEAVEKLKHSGFDNVIFHQLDV 65
            ++TG   G+G  + R LA  G    VL +R     G  E V +L+  G + V     DV
Sbjct: 3   VLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAE-VTVAACDV 61

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           AD  A+ ++   + +  G LD +V+NAG+           G +EE         T E  E
Sbjct: 62  ADRDALAALLAALPAALGPLDGVVHNAGVLD--------DGPLEE--------LTPERFE 105

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
           + L     GA  + E    L    D    V  SS  G L
Sbjct: 106 RVLAPKVTGAWNLHELTRDL----DLGAFVLFSSVAGVL 140

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 86.6 bits (215), Expect = 4e-20
 Identities = 59/265 (22%), Positives = 100/265 (37%), Gaps = 72/265 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD---NVIFHQLDV 65
            ++TGA+ GIG  + R+ A  G    L AR      + +++LK    +   +V    LDV
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D      V   + +  G LD+++ NAG+   +S  D                 ++++  
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGVGKGTSLGDL----------------SFKAFR 100

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + + TN LGA  + EA +P  +      +V +SS                          
Sbjct: 101 ETIDTNLLGAAAILEAALPQFRAKGRGHLVLISSVAA----------------------- 137

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN--CVCP 243
                               +G P  AAAY  SKAA+++    L        I    + P
Sbjct: 138 -------------------LRGLP-GAAAYSASKAALSSLAESLRYDVKKRGIRVTVINP 177

Query: 244 GYVKTEMTYNA----GRLTVEEGAE 264
           G++ T +T N       ++VE+ A+
Sbjct: 178 GFIDTPLTANMFTMPFLMSVEQAAK 202

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 5e-20
 Identities = 51/163 (31%), Positives = 75/163 (46%), Gaps = 19/163 (11%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     + A++TG +KGIG+ +   L   G    +TARD+K   EA  +L + G  NV+ 
Sbjct: 1   MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG--NVLG 58

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV D A +    D I + FG LD+L+ NAG+ G  +  + L               T
Sbjct: 59  LAADVRDEADVQRAVDAIVAAFGGLDVLIANAGV-GHFAPVEEL---------------T 102

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
            E     + TN  GA    +A +P L+      I+N+SS  G 
Sbjct: 103 PEEWRLVIDTNLTGAFYTIKAAVPALKRGGGY-IINISSLAGT 144

Length = 237

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.6 bits (215), Expect = 6e-20
 Identities = 65/258 (25%), Positives = 101/258 (39%), Gaps = 71/258 (27%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
            +  A+VTG  +GIG  + R LA  G  + +    D++      ++L+  G   VIF   
Sbjct: 1   MRPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGV-EVIFFPA 59

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DVAD +A  ++ D  ++ +G++D LVNNAG+ G+    D L               T ES
Sbjct: 60  DVADLSAHEAMLDAAQAAWGRIDCLVNNAGV-GVKVRGDLLD-------------LTPES 105

Query: 124 AEKCLQTNYLG--------AKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
            ++ L  N  G        AKRM     P  +      IV VSS                
Sbjct: 106 FDRVLAINLRGPFFLTQAVAKRMLAQ--PEPEELPHRSIVFVSS---------------- 147

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
             +A  ++  R +                          Y +SKA ++   ++ A +   
Sbjct: 148 -VNAIMVSPNRGE--------------------------YCISKAGLSMAAQLFAARLAE 180

Query: 236 FCINC--VCPGYVKTEMT 251
             I    V PG +KT+MT
Sbjct: 181 EGIGVYEVRPGLIKTDMT 198

Length = 256

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 86.2 bits (214), Expect = 7e-20
 Identities = 55/250 (22%), Positives = 90/250 (36%), Gaps = 59/250 (23%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG ++GIG  + R LA  G    +         E  E+L          ++ DV+
Sbjct: 9   KVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVS 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
              ++      I+  FGK+DIL+ NAGIT                V +  +  TYE   K
Sbjct: 69  SQESVEKTFKQIQKDFGKIDILIANAGIT----------------VHKPALDYTYEQWNK 112

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G     +A   + +      ++  +S                           
Sbjct: 113 VIDVNLNGVFNCAQAAAKIFKKQGKGSLIITAS--------------------------- 145

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
              +    +N            P   AAY  SKAA+    + LA ++  + I  N + PG
Sbjct: 146 ---MSGTIVN-----------RPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSISPG 191

Query: 245 YVKTEMTYNA 254
           Y+ T++T   
Sbjct: 192 YIDTDLTDFV 201

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 85.6 bits (212), Expect = 1e-19
 Identities = 64/268 (23%), Positives = 106/268 (39%), Gaps = 65/268 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   + A++TGA +GIG  + R  A +G   +L     +   +  ++L   G      
Sbjct: 1   MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHR-CTA 58

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV DPA++ +     +   G++DILVNNAG+         L  F++       M+  
Sbjct: 59  VVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-------RLGSFLD-------MSD- 103

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  +  +  N  G   + +A++P +      RIV +SS  G ++           +D  
Sbjct: 104 -EDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV-----------AD-- 149

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                            AY L+KAA+   T+ LA +Y      +
Sbjct: 150 -----------------------------PGETAYALTKAAIVGLTKSLAVEYAQSGIRV 180

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESP 266
           N +CPGYV+T M   A  +  +   E P
Sbjct: 181 NAICPGYVRTPM---AESIARQSNPEDP 205

Length = 263

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 84.7 bits (210), Expect = 2e-19
 Identities = 48/249 (19%), Positives = 74/249 (29%), Gaps = 66/249 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A++TG   GIG    + L   G  + +L   +  G    ++ +         F Q DV  
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAIN--PKVKATFVQCDVTS 60

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              + +        FG++DIL+NNAGI       D  S             +     EK 
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGI------LDEKSYLFA--------GKLPPPWEKT 106

Query: 128 LQTNYLGAKRMCEALIPLLQLS---DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  N  G        +  +  +       IVN+ S  G                   L  
Sbjct: 107 IDVNLTGVINTTYLALHYMDKNKGGKGGVIVNIGSVAG-------------------LYP 147

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP---NFCINCV 241
                                         Y  SK  +  +TR LA          +N +
Sbjct: 148 APQ------------------------FPVYSASKHGVVGFTRSLADLLEYKTGVRVNAI 183

Query: 242 CPGYVKTEM 250
           CPG+  T +
Sbjct: 184 CPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 4e-19
 Identities = 63/242 (26%), Positives = 98/242 (40%), Gaps = 62/242 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA  GIG E+   LA  G   V+   +++    A E L+ +G    I   +DV D 
Sbjct: 7   ALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGK-AIGVAMDVTDE 65

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            AI++  D+    FG +DILVNNAGI  ++         IE+           E  +K +
Sbjct: 66  EAINAGIDYAVETFGGVDILVNNAGIQHVAP--------IED--------FPTEKWKKMI 109

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
                GA    +A +P+++     RI+N++S  G                          
Sbjct: 110 AIMLDGAFLTTKAALPIMKAQGGGRIINMASVHG-------------------------- 143

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGYV 246
                       GS          AAY+ +K  +   T+++A +       +N +CPGYV
Sbjct: 144 ----------LVGSAGK-------AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYV 186

Query: 247 KT 248
            T
Sbjct: 187 DT 188

Length = 258

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 83.5 bits (207), Expect = 5e-19
 Identities = 53/250 (21%), Positives = 92/250 (36%), Gaps = 64/250 (25%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDN---VIFHQ 62
            ++ ++TG + GIG  + ++L   G   ++ AR E    EAVE+++     +   V +  
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            D++D   +           G  D++VN AGI        ++ G  E+         T E
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGI--------SIPGLFED--------LTAE 104

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             E+ +  NY G+  +  A++PL++      IV VSS    +         G++      
Sbjct: 105 EFERGMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSSQAALV---------GIY------ 149

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK--KYPNFCINC 240
                      Y                  +AY  SK A+      L +  K  N  ++ 
Sbjct: 150 ----------GY------------------SAYCPSKFALRGLAESLRQELKPYNIRVSV 181

Query: 241 VCPGYVKTEM 250
           V P    T  
Sbjct: 182 VYPPDTDTPG 191

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 83.8 bits (207), Expect = 5e-19
 Identities = 76/291 (26%), Positives = 118/291 (40%), Gaps = 65/291 (22%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVIFHQLDV 65
           R  ++TGAN GIG      +A  G    +  R++    EA  E    SG  N+  H +D+
Sbjct: 2   RSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVDM 61

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +DP  +    +  +    KL +L+NNAG                  V + ++T+  +  E
Sbjct: 62  SDPKQVWEFVEEFKEEGKKLHVLINNAGCM----------------VNKRELTE--DGLE 103

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K   TN LG   +   LIP+L+  +  R++ VSS     M V          +  NL  E
Sbjct: 104 KNFATNTLGTYILTTHLIPVLEKEEDPRVITVSSG---GMLVQK-------LNTNNLQSE 153

Query: 186 R--VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP 243
           R   D  +  Y  + ++    T+ W                     AKK+P    + + P
Sbjct: 154 RTAFDGTMV-YAQNKRQQVIMTEQW---------------------AKKHPEIHFSVMHP 191

Query: 244 GYVKTEMTYNA---------GRL-TVEEGAESPVWLALLH--KGGPSGLFF 282
           G+  T    N+          RL + E+GA++ VWLAL       PSG F+
Sbjct: 192 GWADTPAVRNSMPDFHARFKDRLRSEEQGADTVVWLALSSAAAKAPSGRFY 242

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 83.1 bits (206), Expect = 8e-19
 Identities = 54/247 (21%), Positives = 91/247 (36%), Gaps = 65/247 (26%)

Query: 8   YAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
             ++TGA++GIG  +  +L    +  + VL AR E+   E  E+L+      V   + D+
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELR--PGLRVTTVKADL 58

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESA 124
           +D A +  + + IR   G+ D+L+NNAG  G +S         +++              
Sbjct: 59  SDAAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDLDELQKYF------------ 106

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSAR-IVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
                 N      +   L+   +     + +VNVSS      +                 
Sbjct: 107 ----DLNLTSPVCLTSTLLRAFKKRGLKKTVVNVSSGAAVNPF----------------- 145

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP 243
                                 KGW      Y  SKAA + + R+LA + P+  +    P
Sbjct: 146 ----------------------KGW----GLYCSSKAARDMFFRVLAAEEPDVRVLSYAP 179

Query: 244 GYVKTEM 250
           G V T+M
Sbjct: 180 GVVDTDM 186

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 32/186 (17%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL-----KHSGFDNVI 59
            K+ A+VTGA+ G G     +LA  G + + T R+     E  E L     + +   N+ 
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRN----PEKQENLLSQATQLNLQQNIK 57

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             QLDV D  +IH+    ++   G++D+LVNNAG            GF+EE +   +  +
Sbjct: 58  VQQLDVTDQNSIHNFQLVLKEI-GRIDLLVNNAGY--------ANGGFVEE-IPVEEYRK 107

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM------YVTHEWAK 173
            +E       TN  GA  + +A++P ++   S +I+N+SS  G++       YV+ ++A 
Sbjct: 108 QFE-------TNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYAL 160

Query: 174 GVFSDA 179
             FS++
Sbjct: 161 EGFSES 166

Length = 280

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 82.9 bits (205), Expect = 1e-18
 Identities = 67/246 (27%), Positives = 96/246 (39%), Gaps = 63/246 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG  KGIGY +V +LA  G      AR++K   E + + +  GF  V     DV+  
Sbjct: 9   ALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGF-KVEGSVCDVSSR 67

Query: 69  AAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           +    + D + SHF GKL+ILVNNAG   I  +A                  T E     
Sbjct: 68  SERQELMDTVASHFGGKLNILVNNAGTN-IRKEA---------------KDYTEEDYSLI 111

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           + TN+  A  +     PLL+ S +  IV +SS  G                         
Sbjct: 112 MSTNFEAAYHLSRLAHPLLKASGNGNIVFISSVAG------------------------- 146

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
                  +     G+P           Y  +K A+N  TR LA ++   N  +N V P  
Sbjct: 147 -------VIAVPSGAP-----------YGATKGALNQLTRSLACEWAKDNIRVNAVAPWV 188

Query: 246 VKTEMT 251
           + T + 
Sbjct: 189 IATPLV 194

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 82.3 bits (204), Expect = 2e-18
 Identities = 48/159 (30%), Positives = 75/159 (47%), Gaps = 25/159 (15%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           +  + A+VTGA+ GIG     +LA  G     T+R+             +    V   +L
Sbjct: 2   SNSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---------APIPGVELLEL 52

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DV D A++ +  D + +  G++D+LVNNAG+         L+G  EE         +   
Sbjct: 53  DVTDDASVQAAVDEVIARAGRIDVLVNNAGV--------GLAGAAEE--------SSIAQ 96

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
           A+    TN  G  RM  A++P ++   S RI+N+SS LG
Sbjct: 97  AQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLG 135

Length = 270

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 81.5 bits (202), Expect = 3e-18
 Identities = 52/163 (31%), Positives = 70/163 (42%), Gaps = 28/163 (17%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITV-LTARDEKGGLEAVEKLKHSGFDNVI 59
           M +   +  +VTGAN+GIG   V QL   G   V   ARD        E +   G   V+
Sbjct: 1   MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD-------PESVTDLG-PRVV 52

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             QLDV DPA++ + A+        + ILVNNAGI             + EG        
Sbjct: 53  PLQLDVTDPASVAAAAEAASD----VTILVNNAGIF-------RTGSLLLEG-------- 93

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
             ++    ++TNY G   M  A  P+L  +    IVNV S L 
Sbjct: 94  DEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLS 136

Length = 238

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 82.4 bits (204), Expect = 4e-18
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 23/156 (14%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           R AVVTGAN G+GYE    LA  G   VL  R+   G  A  ++  +    +V   +LD+
Sbjct: 17  RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDL 76

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI--TGISSDADTLSGFIEEGVARGKMTQTYES 123
              A++ + AD +R+ + ++D+L+NNAG+  T   + AD   GF                
Sbjct: 77  TSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTAD---GF---------------- 117

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
            E    TN+LG   +   L+  L     +R+V VSS
Sbjct: 118 -ELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSS 152

Length = 306

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 83.1 bits (206), Expect = 6e-18
 Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 72/268 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA+ GIG     ++A  G    L AR+ +   E V +++  G      +  D+ 
Sbjct: 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGG-TAHAYTCDLT 430

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D AA+      I +  G +D LVNNAG +            I   V     T  +   E+
Sbjct: 431 DSAAVDHTVKDILAEHGHVDYLVNNAGRS------------IRRSVE--NSTDRFHDYER 476

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  NY GA R+   L+P ++      +VNVSS              GV ++A       
Sbjct: 477 TMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSI-------------GVQTNAPRF---- 519

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP----NFC-INCV 241
                                     +AY+ SKAA++A++ + A +       F  I+  
Sbjct: 520 --------------------------SAYVASKAALDAFSDVAASETLSDGITFTTIH-- 551

Query: 242 CPGYVKTEMT-----YNAGR-LTVEEGA 263
            P  V+T M      YN    ++ EE A
Sbjct: 552 MP-LVRTPMIAPTKRYNNVPTISPEEAA 578

Length = 657

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 80.2 bits (198), Expect = 1e-17
 Identities = 62/255 (24%), Positives = 98/255 (38%), Gaps = 65/255 (25%)

Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
              + + A+VTGA++GIG  + R+LA +G    +         + +     +     I  
Sbjct: 1   MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV 60

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT-LSGFIEEGVARGKMTQT 120
           Q DVAD AA+  + D   + FG++D+LVNNAG+  + + AD  L  F             
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDF------------- 107

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
               ++ + TN  GA  +         L    RI+N+S+S                    
Sbjct: 108 ----DRTIATNLRGAFVVLREAAR--HLGQGGRIINLSTS-------------------- 141

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI 238
                    V++  L  Y                Y  SKAA+     +LA +       +
Sbjct: 142 ---------VIALPLPGY--------------GPYAASKAAVEGLVHVLANELRGRGITV 178

Query: 239 NCVCPGYVKTEMTYN 253
           N V PG V TE+ +N
Sbjct: 179 NAVAPGPVATELFFN 193

Length = 245

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 82.2 bits (203), Expect = 1e-17
 Identities = 65/253 (25%), Positives = 97/253 (38%), Gaps = 68/253 (26%)

Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL--KHSGFDNVIF 60
           +   R  +VTGA  GIG    ++ A  G   V+  R+ +   E  + L   H        
Sbjct: 2   KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHAL----- 56

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             +DV+D A I    + +   FG++D+LVNNAG+T  +                  +  T
Sbjct: 57  -AMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPT--------------MTATLDTT 101

Query: 121 YESAEKCLQTNYLGAKRM-CEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
            E   +    N  GA  +  EAL  +++    A IVNV+S  G +               
Sbjct: 102 LEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLV--------------- 146

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI- 238
                                  P+         AY  SKAA+ + TR LA ++    I 
Sbjct: 147 ---------------------ALPKR-------TAYSASKAAVISLTRSLACEWAAKGIR 178

Query: 239 -NCVCPGYVKTEM 250
            N V PGYV+T+M
Sbjct: 179 VNAVLPGYVRTQM 191

Length = 520

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 79.8 bits (197), Expect = 2e-17
 Identities = 60/263 (22%), Positives = 95/263 (36%), Gaps = 75/263 (28%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           +  A+VTGA++GIG  +  +LA  G  I       D++      E L        I+ Q 
Sbjct: 1   RPVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGR--RAIYFQA 58

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ-TYE 122
           D+ + +   ++ D     FG+LD LVNNAGI                   RG +   T +
Sbjct: 59  DIGELSDHEALLDQAWEDFGRLDCLVNNAGIA---------------VRPRGDLLDLTED 103

Query: 123 SAEKCLQTNYLG--------AKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKG 174
           S ++ +  N  G        A+RM E          S  I+ V+S               
Sbjct: 104 SFDRLIAINLRGPFFLTQAVARRMVEQPDRFDGPHRS--IIFVTS--------------- 146

Query: 175 VFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP 234
              +A  ++  R                            Y +SKA ++  TR+LA +  
Sbjct: 147 --INAYLVSPNR--------------------------GEYCISKAGLSMATRLLAYRLA 178

Query: 235 NFCINC--VCPGYVKTEMTYNAG 255
           +  I    + PG + T+MT    
Sbjct: 179 DEGIAVHEIRPGLIHTDMTAPVK 201

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 78.9 bits (195), Expect = 3e-17
 Identities = 60/249 (24%), Positives = 91/249 (36%), Gaps = 70/249 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA++GIG+ +   LA  G   V+ +R+E+   EA + ++  G         DV+D 
Sbjct: 8   ALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGV-EATAFTCDVSDE 66

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK-- 126
            AI +  + I   FGK+DILVNNAGI                     +     E  E   
Sbjct: 67  EAIKAAVEAIEEDFGKIDILVNNAGI--------------------IRRHPAEEFPEAEW 106

Query: 127 --CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
              +  N  G   + +A+   +      +I+N+ S                      L  
Sbjct: 107 RDVIDVNLNGVFFVSQAVARHMIKQGHGKIINICS----------------------LLS 144

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
           E                            AY  SK  +   T+ LA ++      +N + 
Sbjct: 145 ELGGP---------------------PVPAYAASKGGVAGLTKALATEWARHGIQVNAIA 183

Query: 243 PGYVKTEMT 251
           PGY  TEMT
Sbjct: 184 PGYFATEMT 192

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 78.7 bits (194), Expect = 3e-17
 Identities = 60/248 (24%), Positives = 87/248 (35%), Gaps = 61/248 (24%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
            K+ A+VTGA +GIG  + R+L  +G   + T        +   +      D V   +LD
Sbjct: 1   MKKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELD 60

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V D          I    G +DILVNNAGIT    D    S F            +++  
Sbjct: 61  VTDTEECAEALAEIEEEEGPVDILVNNAGIT---RD----SVFKR---------MSHQEW 104

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
              + TN      + + L   +      RI+N+SS  G          KG F        
Sbjct: 105 NDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL---------KGQFG------- 148

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                                         Y  +KA M  +T+ LA +       +NC+ 
Sbjct: 149 ---------------------------QTNYSAAKAGMIGFTKALASEGARYGITVNCIA 181

Query: 243 PGYVKTEM 250
           PGY+ T M
Sbjct: 182 PGYIATPM 189

Length = 245

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 78.9 bits (195), Expect = 4e-17
 Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 19/156 (12%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVIFHQLDVAD 67
            ++TGA++GIG  +  +LA  G   VL AR+E   L ++ + L   G +  +    DV+D
Sbjct: 4   VIITGASEGIGRALAVRLARAGAQLVLAARNE-TRLASLAQELADHGGE-ALVVPTDVSD 61

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
             A   + +   + FG +DILVNNAGIT         S F E               E+ 
Sbjct: 62  AEACERLIEAAVARFGGIDILVNNAGIT-------MWSRFDE--------LTDLSVFERV 106

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
           ++ NYLGA     A +P L+ S   +IV VSS  G 
Sbjct: 107 MRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGL 141

Length = 263

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 5e-17
 Identities = 54/177 (30%), Positives = 77/177 (43%), Gaps = 30/177 (16%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TGA++G G          G   V TARD       +  L     D ++   LDV D AA
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARD----TATLADLAEKYGDRLLPLALDVTDRAA 63

Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQT 130
           + +  +    HFG+LDI+VNNAG          L G IEE         T   A   + T
Sbjct: 64  VFAAVETAVEHFGRLDIVVNNAGY--------GLFGMIEE--------VTESEARAQIDT 107

Query: 131 NYLGAKRMCEALIPLLQLSDSARIVNVSS--------SLGKLMYVTHEWAKGVFSDA 179
           N+ GA  + +A++P L+   S  I+ +SS          G  +Y   +WA    S+A
Sbjct: 108 NFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSG--IYHASKWALEGMSEA 162

Length = 275

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 25/157 (15%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG   GIG  + R+    G   ++T R E    E + + K     N+    LDV D 
Sbjct: 8   VLITGGTSGIGLALARKFLEAGNTVIITGRRE----ERLAEAKKELP-NIHTIVLDVGDA 62

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGIT---GISSDADTLSGFIEEGVARGKMTQTYESAE 125
            ++ ++A+ + S +  LDIL+NNAGI     +   A  L     E               
Sbjct: 63  ESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTE--------------- 107

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
             + TN +G  R+ +A +P L+    A IVNVSS L 
Sbjct: 108 --IDTNLIGPIRLIKAFLPHLKKQPEATIVNVSSGLA 142

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 78.1 bits (193), Expect = 7e-17
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 29/182 (15%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
             K+ A+VTGA+ GIG    R+LA  G      AR     ++ +E L   G   V    L
Sbjct: 1   MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARR----VDKMEDLASLG---VHPLSL 53

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DV D A+I +  D I +  G++D+LVNNAG            G IE+           + 
Sbjct: 54  DVTDEASIKAAVDTIIAEEGRIDVLVNNAGY--------GSYGAIED--------VPIDE 97

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM------YVTHEWAKGVFS 177
           A +  + N  GA R+ + ++P ++   S RI+N+SS  GK+       Y   ++A   FS
Sbjct: 98  ARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFS 157

Query: 178 DA 179
           DA
Sbjct: 158 DA 159

Length = 273

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 77.4 bits (191), Expect = 8e-17
 Identities = 46/153 (30%), Positives = 62/153 (40%), Gaps = 17/153 (11%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           V+TGA+ GIG       A  G   VL AR  +   E   +++  G +  I    DVAD A
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGE-AIAVVADVADAA 62

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
            +   AD     FG++D  VNNAG+       D                 T E   +   
Sbjct: 63  QVERAADTAVERFGRIDTWVNNAGVAVFGRFEDV----------------TPEEFRRVFD 106

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
            NYLG      A +P L+      ++NV S LG
Sbjct: 107 VNYLGHVYGTLAALPHLRRRGGGALINVGSLLG 139

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 66/265 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTG ++GIG  +  +LA  G   V+   + +    E   +++  G   V+  + DV+ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVV-RADVSQ 59

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           P  +  +   ++  FG+LD+LV+NA        ++              +T  +  A   
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSE--------------LTPAHWDA--K 103

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           + TN        +    L++     RIV + SSLG +  + +  A G             
Sbjct: 104 MNTNLKALVHCAQQAAKLMRERGGGRIVAI-SSLGSIRALPNYLAVGT------------ 150

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                                         +KAA+ A  R LA +     I  N V PG 
Sbjct: 151 ------------------------------AKAALEALVRYLAVELGPRGIRVNAVSPGV 180

Query: 246 VKTEMT---YNAGRLTVEEGAESPV 267
           + T+      N   L     A +P 
Sbjct: 181 IDTDALAHFPNREDLLEAAAANTPA 205

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 77.1 bits (190), Expect = 1e-16
 Identities = 59/248 (23%), Positives = 87/248 (35%), Gaps = 63/248 (25%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A R A+VTGA  GIG    +  A  G   V+  RD +        +   G       Q D
Sbjct: 4   AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG--RAFARQGD 61

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V    A+ ++ DF+ + +G+LD+LVNNA             GF   G     +T      
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNA-------------GFGCGGTV---VTTDEADW 105

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  ++ N  G     +  IP++Q      IVN +S L                       
Sbjct: 106 DAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA---------------------- 143

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                                 G     AAY+ SK A+ + TR +A  +      +N V 
Sbjct: 144 --------------------LAGGRGR-AAYVASKGAIASLTRAMALDHATDGIRVNAVA 182

Query: 243 PGYVKTEM 250
           PG + T  
Sbjct: 183 PGTIDTPY 190

Length = 252

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 77.0 bits (190), Expect = 1e-16
 Identities = 69/285 (24%), Positives = 104/285 (36%), Gaps = 85/285 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA+ GIG  +  +LA  G   V+  R ++   E V +   +     I  Q DV+  
Sbjct: 6   ALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSKE 65

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + ++       FG LDILVNNAG+ G +S  +                 T E   K +
Sbjct: 66  EDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEM----------------TLEDWNKVI 109

Query: 129 QTN----YLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
             N    +L A+   EA+    +     +I+N+SS                         
Sbjct: 110 DVNLTGQFLCAR---EAIKRFRKSKIKGKIINMSS------------------------- 141

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
             V E +                WP +   Y  SK  +   T+ LA++Y    I  N + 
Sbjct: 142 --VHEKIP---------------WPGH-VNYAASKGGVKMMTKTLAQEYAPKGIRVNAIA 183

Query: 243 PGYVKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
           PG + T +   A                GR+   EE A +  WLA
Sbjct: 184 PGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLA 228

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 76.9 bits (190), Expect = 2e-16
 Identities = 45/151 (29%), Positives = 64/151 (42%), Gaps = 20/151 (13%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TGA  GIG       A  G        +E  GL A+      G  N     LDV D AA
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINE-AGLAALAAEL--GAGNAWTGALDVTDRAA 62

Query: 71  I-HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
              ++ADF  +  G+LD+L NNAGI           G  E+           E+ ++ + 
Sbjct: 63  WDAALADFAAATGGRLDVLFNNAGI--------LRGGPFED--------IPLEAHDRVID 106

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSS 160
            N  G      A +P L+ +  AR++N SS+
Sbjct: 107 INVKGVLNGAHAALPYLKATPGARVINTSSA 137

Length = 260

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 76.6 bits (189), Expect = 2e-16
 Identities = 61/245 (24%), Positives = 93/245 (37%), Gaps = 62/245 (25%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
            + A+VTGA  GIG  + R LA  G   V+    E+G   A +    +G   VI+   DV
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGS-VIYLPADV 59

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
                I  +     + FG LDILVNNAGI  ++         IEE           E  +
Sbjct: 60  TKEDEIADMIAAAAAEFGGLDILVNNAGIQHVAP--------IEE--------FPPEDWD 103

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + +      A     A +P ++     RI+N++S+ G                       
Sbjct: 104 RIIAVMLTSAFHTIRAALPHMKKQGWGRIINIASAHG----------------------- 140

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                           SP         +AY+ +K  +   T++LA +       +N +CP
Sbjct: 141 -------------LVASPFK-------SAYVAAKHGLIGLTKVLALEVAEHGITVNAICP 180

Query: 244 GYVKT 248
           GYV+T
Sbjct: 181 GYVRT 185

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.3 bits (188), Expect = 2e-16
 Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 19/156 (12%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDVAD 67
           A++TGA +GIG  V   LA  G+   L AR E+  L+AV E+++  G   V+    DV+D
Sbjct: 10  ALITGAGRGIGRAVAIALAKEGVNVGLLARTEEN-LKAVAEEVEAYGV-KVVIATADVSD 67

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              + +  + +++  G +DIL+NNAGI+           F+E               EK 
Sbjct: 68  YEEVTAAIEQLKNELGSIDILINNAGIS-------KFGKFLE---------LDPAEWEKI 111

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
           +Q N +G      A++P +    S  I+N+SS+ G+
Sbjct: 112 IQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ 147

Length = 239

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 76.4 bits (188), Expect = 3e-16
 Identities = 85/295 (28%), Positives = 124/295 (42%), Gaps = 70/295 (23%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           ++TGAN GIG E  R+LA  G   ++  RD  K    A E  + +    VI   LD+A  
Sbjct: 5   IITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLASL 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            +I + A    +   +LD+L+NNA                  GV R   ++T +  E   
Sbjct: 65  KSIRAFAAEFLAEEDRLDVLINNA------------------GVMRCPYSKTEDGFEMQF 106

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N+LG   +   L+ LL+ S  +RIVNVSS       + H+  K  F D   L  E+  
Sbjct: 107 GVNHLGHFLLTNLLLDLLKKSAPSRIVNVSS-------LAHKAGKINFDD---LNSEK-- 154

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                    Y  G            AY  SK A   +TR LA++     +  N + PG V
Sbjct: 155 --------SYNTG-----------FAYCQSKLANVLFTRELARRLQGTGVTVNALHPGVV 195

Query: 247 KTEMTYNAGRL-----------------TVEEGAESPVWLALLHK-GGPSGLFFS 283
           +TE+  + G                   T  EGA++ ++LAL  +  G SG +FS
Sbjct: 196 RTELGRHTGIHHLFLSTLLNPLFWPFVKTPREGAQTSIYLALAEELEGVSGKYFS 250

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 75.8 bits (187), Expect = 4e-16
 Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 17/156 (10%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-LDV 65
           R AVVTG + GIG   V  L   G    +  RDE+    A  +L+       +     DV
Sbjct: 9   RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDV 68

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D A + + A  + + FG +D+LVNNAG   +S+ ADT                T ++  
Sbjct: 69  LDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADT----------------TDDAWR 112

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL 161
             L+  Y        A +PLL+ S +A IV V+S L
Sbjct: 113 DELELKYFSVINPTRAFLPLLRASAAASIVCVNSLL 148

Length = 265

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 74.8 bits (184), Expect = 7e-16
 Identities = 55/244 (22%), Positives = 95/244 (38%), Gaps = 60/244 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA++G+G  + R  A  G   V+         E+ E +     +  I  Q DV D 
Sbjct: 3   VLVTGASRGLGAAIARSFAREGARVVVNYYRST---ESAEAVAAEAGERAIAIQADVRDR 59

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK-MTQTYESAEKC 127
             + ++ +  ++HFG +D +VNNA           L  F  +   R    T  +E  ++ 
Sbjct: 60  DQVQAMIEEAKNHFGPVDTIVNNA-----------LIDFPFDPDQRKTFDTIDWEDYQQQ 108

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           L+    GA  + +A++P  +   S R++N+ ++L +   V                    
Sbjct: 109 LEGAVKGALNLLQAVLPDFKERGSGRVINIGTNLFQNPVV-------------------- 148

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                   +DY              A     KAA+  +TR +AK+   + I  N V  G 
Sbjct: 149 ------PYHDY------------TTA-----KAALLGFTRNMAKELGPYGITVNMVSGGL 185

Query: 246 VKTE 249
           +K  
Sbjct: 186 LKVT 189

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 74.0 bits (182), Expect = 2e-15
 Identities = 61/254 (24%), Positives = 91/254 (35%), Gaps = 62/254 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     + A+VTGA  GIG      LA  G   V+   + +G     +++   G    I 
Sbjct: 1   MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGG-TAIA 59

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q+DV+DP +  ++AD   S FG +D LVNNA I G                    +T  
Sbjct: 60  VQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYG-------------GMKLDLLITVP 106

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           ++  +K +  N  GA     A+   +       IVN SS                     
Sbjct: 107 WDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSS--------------------- 145

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI 238
                                   T  W   +  Y L+K  +N  T+ LA++    N  +
Sbjct: 146 ------------------------TAAWLY-SNFYGLAKVGLNGLTQQLARELGGMNIRV 180

Query: 239 NCVCPGYVKTEMTY 252
           N + PG + TE T 
Sbjct: 181 NAIAPGPIDTEATR 194

Length = 250

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 73.9 bits (181), Expect = 2e-15
 Identities = 65/253 (25%), Positives = 97/253 (38%), Gaps = 63/253 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVI 59
           M +   + A+VTG  KGIG  +   LA  G   V+     K   E  V +L   G D V 
Sbjct: 1   MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHD-VY 59

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             Q DV+     + + +   +HFGK+DILVNNAGIT                  R     
Sbjct: 60  AVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITR----------------DRTFKKL 103

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             E  E+ +  N         A++P +  ++  RI+++SS +G+          G F   
Sbjct: 104 NREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ---------AGGFGQT 154

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFC 237
                                              Y  +KA M  +T+ LA +    N  
Sbjct: 155 N----------------------------------YSAAKAGMLGFTKSLALELAKTNVT 180

Query: 238 INCVCPGYVKTEM 250
           +N +CPG++ TEM
Sbjct: 181 VNAICPGFIDTEM 193

Length = 247

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 76/292 (26%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV--EKLKHSGFDNVIFHQL 63
            + A+VTG+  GIG  + R LA  G   VL    +   +EAV        G   V++H  
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVK-VLYHGA 60

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D++ PAAI  +  + +  FG +DILVNNAGI  ++         IE+           E 
Sbjct: 61  DLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVAP--------IEDFPT--------EK 104

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  +  N           +P ++     RI+N++S  G +                   
Sbjct: 105 WDAIIALNLSAVFHTTRLALPHMKKQGWGRIINIASVHGLV------------------- 145

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                             S       AN +AY+ +K  +   T+++A +        N +
Sbjct: 146 -----------------AS-------ANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAI 181

Query: 242 CPGYVKTEMTYN-------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE 286
           CPG+V T +             +  E+ A       LL +  PS  F + ++
Sbjct: 182 CPGWVLTPLVEKQISALAQKNGVPQEQAAR-----ELLLEKQPSKQFVTPEQ 228

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 73.5 bits (181), Expect = 3e-15
 Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 37/179 (20%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           +VTG   GIG  +  +LA  G I V+  R      E  E+L+        F Q+D+ D A
Sbjct: 11  IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPR-AEFVQVDLTDDA 68

Query: 70  AIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                 +   + FG++D LVNNAG+  G+  +A     F+              S E+ L
Sbjct: 69  QCRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEA-GREAFV-------------ASLERNL 114

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSS---------------SLGKLMYVTHEWA 172
              Y+ A      L P L+ S  A IVN+SS               + G  + +T EWA
Sbjct: 115 IHYYVMAH---YCL-PHLKASRGA-IVNISSKTALTGQGGTSGYAAAKGAQLALTREWA 168

Length = 258

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 7e-15
 Identities = 51/167 (30%), Positives = 66/167 (39%), Gaps = 19/167 (11%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           +        +VTG   GIG  +    A  G    +    E        +L       V  
Sbjct: 6   LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARL---PGAKVTA 62

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DVADPA +  V D     FG LD+LVNNAGI G        +G I+E         T
Sbjct: 63  TVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAG-------PTGGIDEI--------T 107

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSAR-IVNVSSSLGKLMY 166
            E  E+ L  N  G      A +PLL+ S     I+ +SS  G+L Y
Sbjct: 108 PEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY 154

Length = 264

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 73.0 bits (180), Expect = 8e-15
 Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 17/154 (11%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            V+TGA+ G+G    R  A  G   VL AR E+G      +++ +G + +     DVAD 
Sbjct: 11  VVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAV-VADVADA 69

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A+ + AD      G +D  VNNA +T      D                 T E   +  
Sbjct: 70  EAVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDV----------------TPEEFRRVT 113

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
           +  YLG      A +  ++  D   I+ V S+L 
Sbjct: 114 EVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147

Length = 334

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 72.8 bits (179), Expect = 9e-15
 Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 23/154 (14%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG   G+G E  R LA  G   ++ AR      EA+     +G D V    LD+A
Sbjct: 27  KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREAL-----AGIDGVEVVMLDLA 81

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  ++ + A+       ++DIL+NNAG+              E  V  G   Q       
Sbjct: 82  DLESVRAFAERFLDSGRRIDILINNAGVMACP----------ETRVGDGWEAQ------- 124

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 160
              TN+LG   +   L P L     AR+V +SS+
Sbjct: 125 -FATNHLGHFALVNLLWPALAAGAGARVVALSSA 157

Length = 315

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 71.8 bits (177), Expect = 1e-14
 Identities = 57/252 (22%), Positives = 87/252 (34%), Gaps = 75/252 (29%)

Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           + + +   VTGA +GIGY V       G   +   +            +   F       
Sbjct: 5   DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLT-------QEDYPFAT---FV 54

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGI--TGISSDADTLSGFIEEGVARGKMTQT 120
           LDV+D AA+  V   + +  G LD+LVN AGI   G     D+LS               
Sbjct: 55  LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMG---ATDSLS--------------- 96

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  ++    N  GA  +  A++P  +   S  IV V                   S+A 
Sbjct: 97  DEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVG------------------SNAA 138

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC 240
           ++                    P         AAY  SKAA+ +  + +  +   + + C
Sbjct: 139 HV--------------------PRI-----GMAAYGASKAALTSLAKCVGLELAPYGVRC 173

Query: 241 --VCPGYVKTEM 250
             V PG   T+M
Sbjct: 174 NVVSPGSTDTDM 185

Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 67/244 (27%), Positives = 95/244 (38%), Gaps = 62/244 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA +GIGY V R LA  G       R+ +  LE V  L+  G+    + +LDVAD 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATY-KLDVADS 59

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           AA+  V   +   +G +D+LVN AGI  +        G I+          + E  +   
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGILRL--------GAIDS--------LSDEDWQATF 103

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G   + +A+ P ++   S  IV V                   S+A N+      
Sbjct: 104 AVNTFGVFNVSQAVSPRMKRRRSGAIVTVG------------------SNAANV------ 139

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC--VCPGYV 246
                         P         AAY  SKAA+   T+ L  +   + I C  V PG  
Sbjct: 140 --------------PRM-----GMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGST 180

Query: 247 KTEM 250
            TEM
Sbjct: 181 DTEM 184

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 71.3 bits (175), Expect = 1e-14
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 24/155 (15%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITV-LTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            +VTGAN+GIG   V  L  +G   V    RD      +   L     D V+  +LDV D
Sbjct: 6   VLVTGANRGIGKAFVESLLAHGAKKVYAAVRD----PGSAAHLVAKYGDKVVPLRLDVTD 61

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           P +I + A   +     +D+++NNAG+          +  +EEG          E+ ++ 
Sbjct: 62  PESIKAAAAQAKD----VDVVINNAGVL-------KPATLLEEGA--------LEALKQE 102

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
           +  N  G  R+ +A  P+L+ +    IVN++S   
Sbjct: 103 MDVNVFGLLRLAQAFAPVLKANGGGAIVNLNSVAS 137

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 71.7 bits (176), Expect = 1e-14
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 68/254 (26%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A +  +VTG ++GIG  + +     G   +++AR  +   +A E+L  S +   I    D
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEEL--SAYGECIAIPAD 62

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYES 123
           ++    I ++   +     +LD+LVNNAG T G   +A   SG+                
Sbjct: 63  LSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLEAFPESGW---------------- 106

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLS----DSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
            +K +  N      + +AL+PLL+ +    + AR++N+ S                    
Sbjct: 107 -DKVMDINVKSVFFLTQALLPLLRAAATAENPARVINIGS-------------------- 145

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFC 237
                  +  ++   L +Y               +Y  SKAA++  TR LAK+    +  
Sbjct: 146 -------IAGIVVSGLENY---------------SYGASKAAVHQLTRKLAKELAGEHIT 183

Query: 238 INCVCPGYVKTEMT 251
           +N + PG   ++MT
Sbjct: 184 VNAIAPGRFPSKMT 197

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 58/260 (22%), Positives = 87/260 (33%), Gaps = 62/260 (23%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
            + A++TGA +GIG  +  +LA +G   VL   + +   ++  +       N +    DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D   + ++ D     FG  D++VNNAGI  I+                   T T E  +
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAPITPLL----------------TITEEDLK 105

Query: 126 KCLQTNYLGAKRMC-EALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           K    N  G       A     +L    +I+N SS  G                      
Sbjct: 106 KVYAVNVFGVLFGIQAAARQFKKLGHGGKIINASSIAG---------------------- 143

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                          +G P          AY  SK A+   T+  A++       +N   
Sbjct: 144 --------------VQGFPNL-------GAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182

Query: 243 PGYVKTEMTYNAGRLTVEEG 262
           PG VKTEM         E  
Sbjct: 183 PGIVKTEMWDYIDEEVGEIA 202

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 51/158 (32%), Positives = 65/158 (41%), Gaps = 22/158 (13%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG    R L   G    + ARDE     A  +      + V+    DV 
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQE----LEGVLGLAGDVR 56

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A +    D +   FG LD LVNNAG+                GV +     T E    
Sbjct: 57  DEADVRRAVDAMEEAFGGLDALVNNAGV----------------GVMKPVEELTPEEWRL 100

Query: 127 CLQTNYLGAKRMC-EALIPLLQLSDSARIVNVSSSLGK 163
            L TN  GA     +A   LL+      IVNV S  GK
Sbjct: 101 VLDTNLTGAFYCIHKAAPALLRRGGGT-IVNVGSLAGK 137

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 46/153 (30%), Positives = 66/153 (43%), Gaps = 20/153 (13%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TGA  GIG E     A NG    L   DE G      +L     +NV+   LDV D AA
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGA---ENVVAGALDVTDRAA 61

Query: 71  IH-SVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
              ++ADF  +  G+LD L NNAG+           G  E+            + ++ + 
Sbjct: 62  WAAALADFAAATGGRLDALFNNAGVGR--------GGPFED--------VPLAAHDRMVD 105

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
            N  G      A +P L+ +  AR++N +SS  
Sbjct: 106 INVKGVLNGAYAALPYLKATPGARVINTASSSA 138

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 63/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           R A+VTG   GIG  + ++LA +G         +E+     +++    GFD     + DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFD-FRVVEGDV 59

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +   +  +    + +  G +D+LVNNAGIT              +   + KM  TYE   
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGIT-------------RDATFK-KM--TYEQWS 103

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN      + + +I  ++     RI+N+SS  G+         KG F         
Sbjct: 104 AVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQ---------KGQFGQTN----- 149

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF--CINCVCP 243
                                        Y  +KA M  +T+ LA++       +N + P
Sbjct: 150 -----------------------------YSAAKAGMIGFTKALAQEGATKGVTVNTISP 180

Query: 244 GYVKTEMT 251
           GY+ T+M 
Sbjct: 181 GYIATDMV 188

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 70.5 bits (173), Expect = 3e-14
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 18/156 (11%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           ++TGA  G+G  +  + A  G    L   +E+GG E ++ L+ +G D   + + DV D +
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDG-FYQRCDVRDYS 62

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
            + ++A      +G +D++VNNAG+           GF EE         + E  +  + 
Sbjct: 63  QLTALAQACEEKWGGIDVIVNNAGVAS--------GGFFEE--------LSLEDWDWQIA 106

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM 165
            N +G  + C+A +PL +   S RIVN++S  G LM
Sbjct: 107 INLMGVVKGCKAFLPLFKRQKSGRIVNIASMAG-LM 141

Length = 270

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 70.4 bits (173), Expect = 4e-14
 Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 26/163 (15%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGII---TVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           +  ++TG + G G  + ++L   G       LT      G    ++L+    D +   QL
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLT--KNGPG---AKELRRVCSDRLRTLQL 55

Query: 64  DVADPAAIHSVADFIRSHFGKLDI--LVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
           DV  P  I   A +++ H G+  +  LVNNAGI G   D + L                Y
Sbjct: 56  DVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLP------------MDDY 103

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
               KC++ N  G   + +A +PLL+ +   R+VNVSS  G++
Sbjct: 104 ---RKCMEVNLFGTVEVTKAFLPLLRRA-KGRVVNVSSMGGRV 142

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.8 bits (171), Expect = 5e-14
 Identities = 62/249 (24%), Positives = 94/249 (37%), Gaps = 70/249 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A++TG  +GIG  +          + VL    E    E  EK        V   + DV
Sbjct: 8   KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK-------GVFTIKCDV 60

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            +   +    + +   FG++D+LVNNAGI  +         F EE               
Sbjct: 61  GNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMP----FEEFDEEKY------------N 104

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K ++ N  GA       +PLL+LS +  IVN++S+             G+ + AE  T  
Sbjct: 105 KMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASN------------AGIGTAAEGTT-- 150

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA---KKYPNFCINCVC 242
                                        Y ++KA +   TR LA    KY    +N V 
Sbjct: 151 ----------------------------FYAITKAGIIILTRRLAFELGKY-GIRVNAVA 181

Query: 243 PGYVKTEMT 251
           PG+V+T+MT
Sbjct: 182 PGWVETDMT 190

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 6e-14
 Identities = 45/160 (28%), Positives = 63/160 (39%), Gaps = 17/160 (10%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVI 59
           M   A + A+VTGA +GIG  + R  A  G    L   D      A   +        V+
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVL 61

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
               DV D A++ +        FG LD+LVNNAGI                 V    +  
Sbjct: 62  AVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGIN----------------VFADPLAM 105

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           T E   +C   +  GA   C A++P +       IVN++S
Sbjct: 106 TDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS 145

Length = 260

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 63/254 (24%), Positives = 95/254 (37%), Gaps = 66/254 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++ GA++GIG E VRQ   +G   + TARD    L A++ L            LDVADP
Sbjct: 4   VLIVGASRGIGREFVRQYRADGWRVIATARDAA-ALAALQALGAEA------LALDVADP 56

Query: 69  AAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           A   SVA       G  LD  V  AG+ G  ++                   T E  +  
Sbjct: 57  A---SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVE--------------PITREDFDAV 99

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           + TN LG  ++   L+PL++ +     V +SS +G +                       
Sbjct: 100 MHTNVLGPMQLLPILLPLVEAAGGVLAV-LSSRMGSI----------------------- 135

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK 247
                         +  T GW      Y  SKAA+N   R  + +  +     + PG+V+
Sbjct: 136 ------------GDATGTTGW-----LYRASKAALNDALRAASLQARHATCIALHPGWVR 178

Query: 248 TEMTYNAGRLTVEE 261
           T+M      L   +
Sbjct: 179 TDMGGAQAALDPAQ 192

Length = 222

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 69.5 bits (170), Expect = 7e-14
 Identities = 65/265 (24%), Positives = 97/265 (36%), Gaps = 72/265 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 + A+VTG ++GIG  VV +L   G   +     E      V+  K         
Sbjct: 1   DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-DVDYFK--------- 50

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             +DV++   +    D++ S +G++DILVNNAGI    +         EE          
Sbjct: 51  --VDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGAIHAV-----EEDEWD------ 97

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
                + +  N  G   M +  IP +   D   I+N++S               V S A 
Sbjct: 98  -----RIINVNVNGIFLMSKYTIPYMLKQDKGVIINIAS---------------VQSFA- 136

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN 239
                                   T+    NAAAY+ SK A+   TR +A  Y P     
Sbjct: 137 -----------------------VTR----NAAAYVTSKHAVLGLTRSIAVDYAPTIRCV 169

Query: 240 CVCPGYVKTEMTYNAGRLTVEEGAE 264
            VCPG ++T +   A  L V +  E
Sbjct: 170 AVCPGSIRTPLLEWAAELEVGKDPE 194

Length = 258

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 69.0 bits (169), Expect = 9e-14
 Identities = 57/252 (22%), Positives = 83/252 (32%), Gaps = 66/252 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVIFHQL--DV 65
           A++TG++ GIG       A  G    LT RD +  LE   +    +G        +  D+
Sbjct: 6   AIITGSSSGIGAGTAILFARLGARLALTGRDAER-LEETRQSCLQAGVSEKKILLVVADL 64

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            +      +     + FG+LDILVNNAGI       D                Q  E  +
Sbjct: 65  TEEEGQDRIISTTLAKFGRLDILVNNAGILAKGGGED----------------QDIEEYD 108

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K +  N      + +  +P L +     IVNVSS  G                       
Sbjct: 109 KVMNLNLRAVIYLTKLAVPHL-IKTKGEIVNVSSVAGG---------------------- 145

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                G       Y +SKAA++ +TR  A +     +  N V P
Sbjct: 146 -----------------RSFPGVL----YYCISKAALDQFTRCTALELAPKGVRVNSVSP 184

Query: 244 GYVKTEMTYNAG 255
           G + T      G
Sbjct: 185 GVIVTGFHRRMG 196

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 70.6 bits (174), Expect = 9e-14
 Identities = 71/257 (27%), Positives = 100/257 (38%), Gaps = 81/257 (31%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNG----IITVLTARDEKGGLEAV-EKLKHSGFDNVI 59
           A + A+VTGA +GIG  +   LA +G     + V  A +    L AV  ++  +      
Sbjct: 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEA---LAAVANRVGGTAL---- 261

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDAD-TLSGFIEEGVARGKMT 118
              LD+  P A   +A+ +    G LDI+V+NAGIT      D TL            M 
Sbjct: 262 --ALDITAPDAPARIAEHLAERHGGLDIVVHNAGIT-----RDKTL----------ANMD 304

Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
           +    +   L  N L   R+ EAL+    L D  RIV VSS  G                
Sbjct: 305 EARWDS--VLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI--------------- 347

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAM----NAYTRILAKKYP 234
           A N  +                          N AA   SKA +     A   +LA++  
Sbjct: 348 AGNRGQ-------------------------TNYAA---SKAGVIGLVQALAPLLAER-- 377

Query: 235 NFCINCVCPGYVKTEMT 251
              IN V PG+++T+MT
Sbjct: 378 GITINAVAPGFIETQMT 394

Length = 450

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
             + AV+TG    +G  + R LA  G       R+++ G +  +++   G    I    D
Sbjct: 4   KNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGR-AIALAAD 62

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V D A++    + I + FG +DIL+N AG  G   DA T     E    +       E  
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAG--GNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           E     N  G+    +     +       I+N+SS
Sbjct: 121 EFVFDLNLNGSFLPSQVFGKDMLEQKGGSIINISS 155

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 68.8 bits (168), Expect = 1e-13
 Identities = 57/251 (22%), Positives = 95/251 (37%), Gaps = 64/251 (25%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
             R  +VTGA+ GIG E     A  G   +L  R+E+   +  + +   G     +  LD
Sbjct: 3   NDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62

Query: 65  VADPAA--IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT-QTY 121
           +    +     +A  I  ++ +LD +++NAG+ G                    ++ Q  
Sbjct: 63  LLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLG----------------DVCPLSEQNP 106

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           +  +   Q N      + +AL+PLL  SD+  +V  SSS+G+         +G       
Sbjct: 107 QVWQDVXQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR---------QGR------ 151

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC--IN 239
                                       AN  AY +SK A     ++LA +Y      +N
Sbjct: 152 ----------------------------ANWGAYAVSKFATEGLXQVLADEYQQRNLRVN 183

Query: 240 CVCPGYVKTEM 250
           C+ PG  +T M
Sbjct: 184 CINPGGTRTAM 194

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 69.2 bits (170), Expect = 1e-13
 Identities = 45/157 (28%), Positives = 66/157 (42%), Gaps = 25/157 (15%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TG + G G  + +     G   V T R E     A    +    D  +   LDV D  A
Sbjct: 9   ITGVSSGFGRALAQAALAAGHRVVGTVRSE----AARADFEALHPDRALARLLDVTDFDA 64

Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE--KCL 128
           I +V     + FG +D+LVNNAG            G IEE             AE  +  
Sbjct: 65  IDAVVADAEATFGPIDVLVNNAGY--------GHEGAIEES----------PLAEMRRQF 106

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM 165
           + N  GA  M +A++P ++      IVN+ +S+G L+
Sbjct: 107 EVNVFGAVAMTKAVLPGMRARRRGHIVNI-TSMGGLI 142

Length = 277

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 61/243 (25%), Positives = 94/243 (38%), Gaps = 62/243 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AVVTGA +G+G  +    A  G   ++ AR E    E  E+++ +G    +    D+A P
Sbjct: 13  AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVV-AADLAHP 71

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A   +A      FG+LDI+VNN G T  +    T +  + +                  
Sbjct: 72  EATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLAD----------------AF 115

Query: 129 QTNYLGAKRMCEALIPL-LQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
             N   A  +  A +PL L+ S    ++N+SS++G+L       A   F           
Sbjct: 116 TFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-------AGRGF----------- 157

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYV 246
                                    AAY  +KAA+  YTR+ A    P   +N + PG +
Sbjct: 158 -------------------------AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSI 192

Query: 247 KTE 249
            T 
Sbjct: 193 LTS 195

Length = 263

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 67/281 (23%), Positives = 107/281 (38%), Gaps = 77/281 (27%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLD 64
              A++TGA+ GIG       A  G    L AR +   LEA+  +L+ +G      + +D
Sbjct: 6   MPRALITGASSGIGKATALAFAKAGWDLALVARSQ-DALEALAAELRSTG-VKAAAYSID 63

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGI--TGISSDADTLSGFIEEGVARGKMTQTYE 122
           +++P AI      +   FG  D+L+NNAG+  TG       L                  
Sbjct: 64  LSNPEAIAPGIAELLEQFGCPDVLINNAGMAYTG------PLL------------EMPLS 105

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             +  +Q N     + C A++P ++      I+NVSS            A+  F      
Sbjct: 106 DWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSS---------IA-ARNAFP----- 150

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC-- 240
                                    W     AY +SKAA+ A+T+ LA++  +  I    
Sbjct: 151 ------------------------QW----GAYCVSKAALAAFTKCLAEEERSHGIRVCT 182

Query: 241 VCPGYVKTEM----TYNA-----GRLTVEEGAESPVWLALL 272
           +  G V T +    T  A       L+ E+ A++ + LA L
Sbjct: 183 ITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQL 223

Length = 241

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 29/189 (15%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA+ GIG    R LA  G    + AR     LEA+     +     +  +LDV D 
Sbjct: 6   ALVTGASSGIGEATARALAAEGAAVAIAAR-RVDRLEALADELEAEGGKALVLELDVTDE 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGIT--GISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             + +  +      G+LDILVNNAGI   G   DADT                      +
Sbjct: 65  QQVDAAVERTVEALGRLDILVNNAGIMLLGPVEDADT------------------TDWTR 106

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL------MYVTHEWAKGVFSDA- 179
            + TN LG      A +P   L +   IVN+SS  G++      +Y   ++    FS+  
Sbjct: 107 MIDTNLLGLMYTTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGL 166

Query: 180 -ENLTEERV 187
            + +TE  V
Sbjct: 167 RQEVTERGV 175

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 68.4 bits (168), Expect = 2e-13
 Identities = 70/249 (28%), Positives = 102/249 (40%), Gaps = 64/249 (25%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDN--VIFHQLDVAD 67
           VTGA  GIG E     A +G   +L  R E+  LEAV   ++ +G     +I   L  A 
Sbjct: 17  VTGAGDGIGREAALTYARHGATVILLGRTEEK-LEAVYDEIEAAGGPQPAIIPLDLLTAT 75

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           P     +AD I   FG+LD +++NAG+ G       L    +         Q  E  +  
Sbjct: 76  PQNYQQLADTIEEQFGRLDGVLHNAGLLG------ELGPMEQ---------QDPEVWQDV 120

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +Q N      + +AL+PLL  S +A +V  SSS+G+         +G           R 
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR---------QG-----------R- 159

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGY 245
                                 AN  AY +SK A     ++LA +Y   N  +NC+ PG 
Sbjct: 160 ----------------------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGG 197

Query: 246 VKTEMTYNA 254
            +T M  +A
Sbjct: 198 TRTAMRASA 206

Length = 247

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 68.1 bits (167), Expect = 2e-13
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 22/154 (14%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDV 65
           + AVVTG   GIG+ +    A  G    L  R E      V ++       N      DV
Sbjct: 16  KVAVVTGGASGIGHAIAELFAAKGARVALLDRSE-----DVAEVAAQLLGGNAKGLVCDV 70

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D  ++ +    + S FG++DILVN+AG+  + + A+ +S                E  +
Sbjct: 71  SDSQSVEAAVAAVISAFGRIDILVNSAGV-ALLAPAEDVS---------------EEDWD 114

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           K +  N  G+  M +A+   +  +   +IVN++S
Sbjct: 115 KTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS 148

Length = 255

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 1/96 (1%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG  +GIG  +  +LA +G    +   +E+   E  +++  +G    + ++LDV+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGG-KAVAYKLDVS 59

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDAD 102
           D   + S  D     FG  D++VNNAG+  I+   +
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPITPILE 95

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 69.1 bits (170), Expect = 3e-13
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A + A+VTGA  GIG    ++LA  G   VL   DE+    A  +L   G D  +    D
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG--GPDRALGVACD 478

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLS 105
           V D AA+ +  +     FG +DI+V+NAGI  IS   +  S
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIA-ISGPIEETS 518

Length = 681

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 67.6 bits (166), Expect = 3e-13
 Identities = 66/249 (26%), Positives = 96/249 (38%), Gaps = 68/249 (27%)

Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           E A + A+VTG  KGIG   V +L   G   V TAR     L           + V F  
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP----------EGVEFVA 55

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            D+       +VA  +    G +DILV+  G  G S+ A         G A      T E
Sbjct: 56  ADLTTAEGCAAVARAVLERLGGVDILVHVLG--GSSAPAG--------GFA----ALTDE 101

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             +  L  N L A R+  AL+P +    S  I++V+S   +L                  
Sbjct: 102 EWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRL------------------ 143

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFC-INC 240
                               P     P +  AY  +KAA++ Y++ L+K+  P    +N 
Sbjct: 144 --------------------P----LPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNT 179

Query: 241 VCPGYVKTE 249
           V PG+++TE
Sbjct: 180 VSPGWIETE 188

Length = 260

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG ++G+G ++   L   G   VL+AR  +   EA   L+  G D +     DVA
Sbjct: 13  KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWI-AADVA 71

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGIT 95
           D A I  +A+     FG +DILVNNAG T
Sbjct: 72  DEADIERLAEETLERFGHVDILVNNAGAT 100

Length = 259

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 66.7 bits (163), Expect = 5e-13
 Identities = 60/247 (24%), Positives = 83/247 (33%), Gaps = 72/247 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA+ GIG      LA  G   V  AR+      A+++L        +  +LDV 
Sbjct: 10  KSVLVTGASSGIGRACAVALAQRGARVVAAARNAA----ALDRLAGETGCEPL--RLDVG 63

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D AAI        +  G  D LVN AGI  + S  D                 T E  ++
Sbjct: 64  DDAAI----RAALAAAGAFDGLVNCAGIASLESALDM----------------TAEGFDR 103

Query: 127 CLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
            +  N  GA  +   +   ++       IVNVSS    +    H                
Sbjct: 104 VMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDH---------------- 147

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                       AY  SKAA++A TR+L  +     I  N V P
Sbjct: 148 ---------------------------LAYCASKAALDAITRVLCVELGPHGIRVNSVNP 180

Query: 244 GYVKTEM 250
               T M
Sbjct: 181 TVTLTPM 187

Length = 245

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 66.8 bits (163), Expect = 6e-13
 Identities = 60/251 (23%), Positives = 99/251 (39%), Gaps = 64/251 (25%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
                A+VTGA  GIG  + R+L   G+   + AR E+G    V++L+ +G         
Sbjct: 1   QDSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGV-EADGRTC 59

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DV     I ++     + +G +D+LVNNAG +G              G A  ++    E 
Sbjct: 60  DVRSVPEIEALVAAAVARYGPIDVLVNNAGRSG--------------GGATAELAD--EL 103

Query: 124 AEKCLQTNYLGAKRMCEALIPL--LQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
               ++TN  G  R+ + ++    +    + RI+N++S+ GK         +GV      
Sbjct: 104 WLDVVETNLTGVFRVTKEVLKAGGMLERGTGRIINIASTGGK---------QGVVH---- 150

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCIN 239
                                         AA Y  SK  +  +T+ L  +       +N
Sbjct: 151 ------------------------------AAPYSASKHGVVGFTKALGLELARTGITVN 180

Query: 240 CVCPGYVKTEM 250
            VCPG+V+T M
Sbjct: 181 AVCPGFVETPM 191

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 66.7 bits (163), Expect = 6e-13
 Identities = 60/274 (21%), Positives = 89/274 (32%), Gaps = 74/274 (27%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
             + A+VTGA  GIG     +LA  G   V+   D       V ++        +  ++D
Sbjct: 2   EGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIA----GGALALRVD 57

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V D   + ++ +     FG LD+LVNNAG          L+  I +              
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAM-------HLTPAIID--------TDLAVW 102

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           ++ +  N  G    C    P +       IVN+SS  G                      
Sbjct: 103 DQTMAINLRGTFLCCRHAAPRMIARGGGSIVNLSSIAG---------------------- 140

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC--VC 242
                                 G P    AY  SKAA+   TR LA +  +  I C  + 
Sbjct: 141 --------------------QSGDPG-YGAYGASKAAIRNLTRTLAAELRHAGIRCNALA 179

Query: 243 PGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGG 276
           PG + T +            A+   +   L  GG
Sbjct: 180 PGLIDTPLLL----------AKLAGFEGALGPGG 203

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 66.9 bits (163), Expect = 7e-13
 Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 19/154 (12%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVIFHQLDV 65
           +  ++TGAN GIG+E  R  AL+G   +L  R+      AV + L+      V    LD+
Sbjct: 2   KVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLDL 61

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           A   ++   A+  ++    L +LV NA +  +                    T T +  E
Sbjct: 62  ASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALP------------------WTLTEDGLE 103

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
              Q N+LG   + + L  +L+ S  AR++ VSS
Sbjct: 104 TTFQVNHLGHFYLVQLLEDVLRRSAPARVIVVSS 137

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 9e-13
 Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 27/158 (17%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
            +TG  +GIG    R LA  G    +   DE    E   +L       V+   LDV DPA
Sbjct: 9   AITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----GLVVGGPLDVTDPA 63

Query: 70  AIHSVADF---IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
              S A F   + +  G +D+LVNNAG+         +  F++E               +
Sbjct: 64  ---SFAAFLDAVEADLGPIDVLVNNAGVM-------PVGPFLDE---------PDAVTRR 104

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            L  N  G     +   P +       +VNV+S  GK+
Sbjct: 105 ILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKI 142

Length = 273

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 66.2 bits (162), Expect = 1e-12
 Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 2/104 (1%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVI 59
           M     + A+VTG  +G+G  + R  A  G    V+  R+ + G     +L+  G    +
Sbjct: 1   MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAK-AV 59

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT 103
           F Q D++D      V       FG+LD LVN AG+T   +  DT
Sbjct: 60  FVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRGTILDT 103

Length = 260

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 65.8 bits (161), Expect = 1e-12
 Identities = 55/241 (22%), Positives = 89/241 (36%), Gaps = 50/241 (20%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA   IG    + L   G   +L   +     +  E+L +   + VI  +LD+ 
Sbjct: 3   KIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDIT 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
              +I  + +     FG++DIL+NNA  +         S F E           YE   +
Sbjct: 63  SKESIKELIESYLEKFGRIDILINNAYPSP----KVWGSRFEE---------FPYEQWNE 109

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS-DAENLTEE 185
            L  N  GA    +A I L +      I+N++S     +Y       GV + D       
Sbjct: 110 VLNVNLGGAFLCSQAFIKLFKKQGKGSIINIAS-----IY-------GVIAPDFRI---- 153

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                       Y+           +   Y + KA +   T+ LAK Y +  I  N + P
Sbjct: 154 ------------YENTQMY------SPVEYSVIKAGIIHLTKYLAKYYADTGIRVNAISP 195

Query: 244 G 244
           G
Sbjct: 196 G 196

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 66.3 bits (162), Expect = 1e-12
 Identities = 56/226 (24%), Positives = 88/226 (38%), Gaps = 58/226 (25%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           T KR  ++TGA+ GIG     Q A  G   V  AR E       +++  +G D +     
Sbjct: 39  TGKR-ILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMA-VPC 96

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D++D  A+ ++   +    G +DIL+NNAG     S    L     E + R      +  
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAG----RSIRRPL----AESLDR------WHD 142

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            E+ +  NY    R+   L P +       I+NV++           W  GV S+A    
Sbjct: 143 VERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVAT-----------W--GVLSEA---- 185

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL 229
                             SP         + Y  SKAA++A +R++
Sbjct: 186 ------------------SPLF-------SVYNASKAALSAVSRVI 206

Length = 293

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 65.5 bits (160), Expect = 2e-12
 Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 63/248 (25%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           + + A+VTG+++GIG  +  +LA  G  I V  AR  K   E  E+++  G   +   + 
Sbjct: 3   SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAV-KA 61

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           +V D   I  +   I   FG+LD+ VNNA                  GV R  M      
Sbjct: 62  NVGDVEKIKEMFAQIDEEFGRLDVFVNNAA----------------SGVLRPAMELEESH 105

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  +  N        +    L++     +I+++ SSLG                     
Sbjct: 106 WDWTMNINAKALLFCAQEAAKLMEKVGGGKIISL-SSLGS-------------------- 144

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                    +YL +Y                  +SKAA+ A TR LA +       +N V
Sbjct: 145 --------IRYLENY--------------TTVGVSKAALEALTRYLAVELAPKGIAVNAV 182

Query: 242 CPGYVKTE 249
             G V T+
Sbjct: 183 SGGAVDTD 190

Length = 250

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 3e-12
 Identities = 65/263 (24%), Positives = 94/263 (35%), Gaps = 88/263 (33%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK--------HSGFDNV 58
           + A+VTGA+ G+G    + LA  G   VL +R        VE+LK          G  +V
Sbjct: 10  KVALVTGASSGLGARFAQVLAQAGAKVVLASR-------RVERLKELRAEIEAEGGAAHV 62

Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
           +   LDV D  +I +      +  G +DILVNN+G++                    K+ 
Sbjct: 63  V--SLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVS-----------------TTQKLV 103

Query: 119 Q-TYESAEKCLQTNYLGA--------KRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTH 169
             T    +    TN  GA        KRM              RI+N++S  G       
Sbjct: 104 DVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL------ 157

Query: 170 EWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL 229
                               VL Q                     Y +SKAA+   TR +
Sbjct: 158 -------------------RVLPQI------------------GLYCMSKAAVVHMTRAM 180

Query: 230 AKKYPNFCI--NCVCPGYVKTEM 250
           A ++    I  N +CPGY+ TE+
Sbjct: 181 ALEWGRHGINVNAICPGYIDTEI 203

Length = 258

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 3e-12
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 2/89 (2%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          +  VVTGA +GIG E+ R+L   G    L   +E   L A+        D V+    DV 
Sbjct: 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAE-LAALAAELGGD-DRVLTVVADVT 67

Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGIT 95
          D AA+ + A+     FG +D++V NAGI 
Sbjct: 68 DLAAMQAAAEEAVERFGGIDVVVANAGIA 96

Length = 296

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 59/260 (22%), Positives = 90/260 (34%), Gaps = 65/260 (25%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDN 57
           MA    R  ++TG + G+G  +  +LA +G   I+  +     +   +AV     +    
Sbjct: 1   MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGK 60

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
            +    DV D AA  +  D     FG+LDILVNNAGI          +            
Sbjct: 61  ALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIA----TDAAFAEL---------- 106

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALI-PLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
             + E  +  +  N  G   + +A + P+++     RIVN++S  G            V 
Sbjct: 107 --SIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAG-----VRGNRGQV- 158

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF 236
                                                 Y  SKA +   T+ LA +    
Sbjct: 159 -------------------------------------NYAASKAGLIGLTKTLANELAPR 181

Query: 237 CI--NCVCPGYVKTEMTYNA 254
            I  N V PG + T M  NA
Sbjct: 182 GITVNAVAPGAINTPMADNA 201

Length = 249

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 65.3 bits (159), Expect = 5e-12
 Identities = 62/246 (25%), Positives = 90/246 (36%), Gaps = 66/246 (26%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           + R   +TG  +GIG  V  + A  G   ++  RD     E  +KL  +  D  +  Q D
Sbjct: 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA----EGAKKLAEALGDEHLSVQAD 323

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           + D AA+ S    I++ +G+LD+LVNNAGI      A+     +E         Q+ E  
Sbjct: 324 ITDEAAVESAFAQIQARWGRLDVLVNNAGI------AEVFKPSLE---------QSAEDF 368

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            +    N  GA     A      +S    IVN+ S    L                    
Sbjct: 369 TRVYDVNLSGA--FACARAAARLMSQGGVIVNLGSIASLLAL------------------ 408

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                        AY  SKAA+   +R LA ++    I  N V 
Sbjct: 409 -------------------------PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVA 443

Query: 243 PGYVKT 248
           PGY++T
Sbjct: 444 PGYIET 449

Length = 520

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 63.8 bits (156), Expect = 6e-12
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 23/164 (14%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH---SGFDN-VIFHQLD 64
            ++TGA+ GIG    R+ A  G   +LT R      E +++L     + F   V+  QLD
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRR----AERLQELADELGAKFPVKVLPLQLD 58

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V+D  +I +  + +   F  +DILVNNA   G++   D                   E  
Sbjct: 59  VSDRESIEAALENLPEEFRDIDILVNNA---GLALGLDPAQEADL------------EDW 103

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT 168
           E  + TN  G   +   ++P++   +   I+N+ S  G+  Y  
Sbjct: 104 ETMIDTNVKGLLNVTRLILPIMIARNQGHIINLGSIAGRYPYAG 147

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 7e-12
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
          M+    + A++TG   GIG E  RQ    G    +T RD      A  +L      + + 
Sbjct: 1  MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGE----SALV 56

Query: 61 HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
           + D  D AA  ++A  +   FG+LD +  NAG+
Sbjct: 57 IRADAGDVAAQKALAQALAEAFGRLDAVFINAGV 90

Length = 249

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 7e-12
 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 1/96 (1%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
          M     + A++TGA+ GIG    +  A  G   V+ AR +    + V +++  G +  + 
Sbjct: 1  MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGE-AVA 59

Query: 61 HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITG 96
             DV D A   ++       FG LDI  NNAG  G
Sbjct: 60 LAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLG 95

Length = 254

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 63.3 bits (154), Expect = 8e-12
 Identities = 48/246 (19%), Positives = 72/246 (29%), Gaps = 64/246 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +   +TG   G+G      LA  G    L  R      + +  +            +D+ 
Sbjct: 8   KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALR---IGGIDLV 64

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DP A     D +   FG+LD LVN AG          + G I +G          ++ ++
Sbjct: 65  DPQAARRAVDEVNRQFGRLDALVNIAGA--------FVWGTIADG--------DADTWDR 108

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N        +A +P L  S   RIVN+ +                           
Sbjct: 109 MYGVNVKTTLNASKAALPALTASGGGRIVNIGAG-------------------------- 142

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK--KYPNFCINCVCPG 244
                               G  A AA    +KA +   T  LA         +N V P 
Sbjct: 143 -------------AALKAGPGMGAYAA----AKAGVARLTEALAAELLDRGITVNAVLPS 185

Query: 245 YVKTEM 250
            + T  
Sbjct: 186 IIDTPP 191

Length = 239

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 63.6 bits (155), Expect = 8e-12
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 16/158 (10%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           ++  +VTG ++G+G  + R  A  G   V+     +   +A E L     D  I  Q DV
Sbjct: 5   EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE---DAAEALADELGDRAIALQADV 61

Query: 66  ADPAAIHSVADFIRSHFGK-LDILVNNAGITGISSDADTLSGFIEEGVARGKM-TQTYES 123
            D   + ++      HFGK +  +VNNA           L+ F  +G AR K    T+E 
Sbjct: 62  TDREQVQAMFATATEHFGKPITTVVNNA-----------LADFSFDGDARKKADDITWED 110

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL 161
            ++ L+ +  GA    +A +P ++     RI+N+ ++L
Sbjct: 111 FQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNL 148

Length = 253

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 63.5 bits (155), Expect = 8e-12
 Identities = 57/250 (22%), Positives = 89/250 (35%), Gaps = 62/250 (24%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
             + A+VT ++ GIG      LA  G  I +    DE+G  E  E+++  G    I  QL
Sbjct: 1   MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEI-RQL 59

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D++D        D +    G++D+LVNNAG     +    +    +E   R   T   + 
Sbjct: 60  DLSDLPEGAQALDKLIQRLGRIDVLVNNAG-AMTKAPFLDMD--FDE--WRKIFTVDVDG 114

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
           A  C Q     A+ M +            RI+N++S         HE             
Sbjct: 115 AFLCSQI---AARHMVKQ-------GQGGRIINITS--------VHEHTP---------- 146

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                                       A+AY  +K A+   T+ +A +       +N V
Sbjct: 147 --LPG-----------------------ASAYTAAKHALGGLTKAMALELVEHGILVNAV 181

Query: 242 CPGYVKTEMT 251
            PG + T M 
Sbjct: 182 APGAIATPMN 191

Length = 256

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 63.4 bits (155), Expect = 8e-12
 Identities = 58/256 (22%), Positives = 91/256 (35%), Gaps = 71/256 (27%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK------HSGFDNVIFHQL 63
           ++TGA+ G+G  + R+ A  G    L AR      + +E+LK      + G   V    L
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARR----TDRLEELKAELLARYPGI-KVAVAAL 60

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DV D   +  V    R   G LD ++ NAGI               +G   G  T  + +
Sbjct: 61  DVNDHDQVFEVFAEFRDELGGLDRVIVNAGIG--------------KGARLG--TGKFWA 104

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +   +TN++ A   CEA + + +   S  +V +SS                        
Sbjct: 105 NKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSA--------------------- 143

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN--CV 241
                                 +G P   AAY  SKA + +    L  +     I    +
Sbjct: 144 ---------------------VRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTI 182

Query: 242 CPGYVKTEMTYNAGRL 257
            PGY+++EM   A   
Sbjct: 183 EPGYIRSEMNAKAKST 198

Length = 248

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 63.6 bits (155), Expect = 8e-12
 Identities = 47/163 (28%), Positives = 75/163 (46%), Gaps = 18/163 (11%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     + AV+TGA+ GIG      LA  G   VL     +   E V+K+K +G     +
Sbjct: 1   MKRLENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAY 59

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           H +D++D   +   A  I+  FG++D+L NNAG+       D  +G I E          
Sbjct: 60  H-VDISDEQQVKDFASEIKEQFGRVDVLFNNAGV-------DNAAGRIHE--------YP 103

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
            +  +K +  +  G   M + L+PL+ +     I+N SS  G+
Sbjct: 104 VDVFDKIMAVDMRGTFLMTKMLLPLM-MEQGGSIINTSSFSGQ 145

Length = 272

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 63.2 bits (154), Expect = 1e-11
 Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 20/153 (13%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R AV+TG   GIG    R+LA  G   V+   D + G  A +++        +F   DV 
Sbjct: 8   RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV------GGLFVPTDVT 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A++++ D     +G +DI  NNAGI+    D+      +  G+   +  Q     + 
Sbjct: 62  DEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDS-----ILNTGLDAWQRVQ-----DV 111

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
            L + YL     C+A +P +       I+N +S
Sbjct: 112 NLTSVYL----CCKAALPHMVRQGKGSIINTAS 140

Length = 255

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL--D 64
          R A+VTG+++GIGY +   LA  G   +L  RD      A E LK  G      H L  D
Sbjct: 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSA---HALAFD 67

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          V D  A+ +  D   +  G +DILVNNAG+
Sbjct: 68 VTDHDAVRAAIDAFEAEIGPIDILVNNAGM 97

Length = 255

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 27/89 (30%), Positives = 40/89 (44%)

Query: 5  AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
            + A +TG   GIG  + +  A  G    +  R  +    A E++  +        Q D
Sbjct: 2  KGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCD 61

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAG 93
          V DP A+ +  D     FGK+DIL+NNA 
Sbjct: 62 VRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 63.0 bits (154), Expect = 1e-11
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 23/159 (14%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK--HSGFDNVIFHQLDVAD 67
           ++TGA+ GIG  +   LA  G   +L  R+     E +E L           +   D+  
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNA----EKLEALAARLPYPGRHRWVVADLTS 64

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
            A   +V    R   G +++L+NNAG+    +    L              Q  E+ E+ 
Sbjct: 65  EAGREAVLARAREM-GGINVLINNAGV----NHFALLE------------DQDPEAIERL 107

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
           L  N     ++  AL+PLL+   SA +VNV S+ G + Y
Sbjct: 108 LALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY 146

Length = 263

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 62.8 bits (153), Expect = 2e-11
 Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 24/159 (15%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   + A+VTG+++GIG +  + LA  G   V+  R +      V     +       
Sbjct: 1   MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              D+ D  ++ ++ D  R  FG LD LV NA            SG +E G     M + 
Sbjct: 61  VGADLTDEESVAALMDTAREEFGGLDALVLNA------------SGGMESG-----MDED 103

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           Y      ++ N    + +  A +PL+     +R+V V+S
Sbjct: 104 Y-----AMRLNRDAQRNLARAALPLMP--AGSRVVFVTS 135

Length = 248

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 62.4 bits (152), Expect = 2e-11
 Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA  G G  + R+ A  G   V+   +  G     E++     +  I  Q DV   
Sbjct: 8   AIVTGAGSGFGEGIARRFAQEGARVVIADINADGA----ERVAADIGEAAIAIQADVTKR 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A + ++ +   S FG+LDILVNNAGIT    +   L   ++E           E  ++  
Sbjct: 64  ADVEAMVEAALSKFGRLDILVNNAGIT--HRNKPMLE--VDE-----------EEFDRVF 108

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
             N        +AL+P ++      I+N++S+ G
Sbjct: 109 AVNVKSIYLSAQALVPHMEEQGGGVIINIASTAG 142

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
          M+    + AVVTGA  GIG E+  +LA  G    +   ++ G     +++  +G    I 
Sbjct: 2  MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-GKAIG 60

Query: 61 HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
            +DV +  A+++  D +   FG +DILV+NAGI
Sbjct: 61 VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGI 94

Length = 262

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 62.5 bits (152), Expect = 2e-11
 Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 2/95 (2%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVI 59
          M     R A+VTGA+ GIG  V R L  +G+  V  AR     +EA+    + +G+  + 
Sbjct: 1  MERWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRV-DKIEALAAECQSAGYPTLF 59

Query: 60 FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
           +Q D+++   I S+   IR+    +D+ +NNAG+
Sbjct: 60 PYQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGL 94

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 61.8 bits (150), Expect = 3e-11
 Identities = 63/255 (24%), Positives = 87/255 (34%), Gaps = 61/255 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG   GIG  +   LA  G   V+     +G       ++ +G    I  + +V   
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAG-GQAIGLECNVTSE 60

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +V     S FG + ILVNNAG  G                    M  T E  E   
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFD---------------MPMTEEDFEWAF 105

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N   A R+ +   P +Q +    I+N+SS                             
Sbjct: 106 KLNLFSAFRLSQLCAPHMQKAGGGAILNISSM---------------------------- 137

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                        S E K      AAY  SKAA+N  TR LA         +N V PG V
Sbjct: 138 -------------SSENKNV--RIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPGAV 182

Query: 247 KTEMTYNAGRLTVEE 261
           KT+   +     +E 
Sbjct: 183 KTDALASVLTPEIER 197

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 61.9 bits (151), Expect = 3e-11
 Identities = 59/246 (23%), Positives = 96/246 (39%), Gaps = 57/246 (23%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           V+TG  +G+G  +   LA  G    L   +++   EAV +    G + V  +  +V D  
Sbjct: 9   VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTE-VRGYAANVTDEE 67

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
            + +    I   FG+L+ L+NNAGI       D L    ++G    KM  + E  +  + 
Sbjct: 68  DVEATFAQIAEDFGQLNGLINNAGIL-----RDGLLVKAKDGKVTSKM--SLEQFQSVID 120

Query: 130 TNYLGAKRMC--EALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
            N  G   +C  EA   +++      I+N+SS                 + A N+ +   
Sbjct: 121 VNLTGV-FLCGREAAAKMIESGSKGVIINISS----------------IARAGNMGQ--- 160

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC--VCPGY 245
                                  N +A   SKA + A T   AK+   + I    + PG 
Sbjct: 161 ----------------------TNYSA---SKAGVAAMTVTWAKELARYGIRVAAIAPGV 195

Query: 246 VKTEMT 251
           ++TEMT
Sbjct: 196 IETEMT 201

Length = 253

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 62.2 bits (151), Expect = 3e-11
 Identities = 61/256 (23%), Positives = 91/256 (35%), Gaps = 67/256 (26%)

Query: 2   AETAKRYA----VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDN 57
             +  RYA    +VTG ++GIG  +VR    NG   V  AR E  G     +L  +G  +
Sbjct: 1   MASGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGS 60

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
             F   DV     I ++       FG++D LVNNAG        D  S            
Sbjct: 61  CKFVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSA----------- 109

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
               +     L  N +      +  +P L+ S    I+N+SS +G               
Sbjct: 110 ----QEFRDLLNLNLISYFLASKYALPHLRKS-QGNIINLSSLVG--------------- 149

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA---KKYP 234
                        + Q                  AA Y+ +K A+ A T+ LA    +Y 
Sbjct: 150 ------------SIGQ----------------KQAAPYVATKGAITAMTKALAVDESRY- 180

Query: 235 NFCINCVCPGYVKTEM 250
              +NC+ PG + T +
Sbjct: 181 GVRVNCISPGNIWTPL 196

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 62.1 bits (151), Expect = 3e-11
 Identities = 56/266 (21%), Positives = 97/266 (36%), Gaps = 63/266 (23%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
            + A+VTGA +GIG+ + ++L  +G    +   +E+    A +KL   G   +   + DV
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAV-KADV 60

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D   + +    +   FG L+++VNNAG+   ++  +T+               T E  +
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGV-APTTPIETI---------------TEEQFD 104

Query: 126 KCLQTNYLGAKRMCEALIPLLQ-LSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           K    N  G     +A     + L    +I+N +S  G                      
Sbjct: 105 KVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG---------------------- 142

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                           G+PE        A Y  +K A+   T+  A+        +N   
Sbjct: 143 --------------VVGNPEL-------AVYSSTKFAVRGLTQTAARDLASEGITVNAYA 181

Query: 243 PGYVKTEMTYNAGRLTVEEGAESPVW 268
           PG VKT M ++      E   +   W
Sbjct: 182 PGIVKTPMMFDIAHQVGENAGKPDEW 207

Length = 256

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 32/161 (19%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  VVTGA  GIG E     A  G   V +  DE       E ++ +G      +++DV+
Sbjct: 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAV-AHAYRVDVS 374

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A+ + A+++R+  G  DI+VNNAGI                G+A G +  + E  ++
Sbjct: 375 DADAMEAFAEWVRAEHGVPDIVVNNAGI----------------GMAGGFLDTSAEDWDR 418

Query: 127 CLQTNYLG--------AKRMCEALIPLLQLSDSARIVNVSS 159
            L  N  G         ++M E             IVNV+S
Sbjct: 419 VLDVNLWGVIHGCRLFGRQMVER-------GTGGHIVNVAS 452

Length = 582

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 62.4 bits (152), Expect = 3e-11
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 19/154 (12%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           + AVVTGA+ G+G  + R+LA  G   +L  R+   G  AV  ++ +  D  +    LD+
Sbjct: 15  KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDL 74

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +  A++ ++ + +R+    + +L+NNAG+        T  GF                 E
Sbjct: 75  SSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGF-----------------E 117

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
               TN+LG   +   L+PLL+ +  AR+ + SS
Sbjct: 118 LQFGTNHLGHFALTAHLLPLLR-AGRARVTSQSS 150

Length = 313

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 23/161 (14%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
             AVVTG   G+G   V +L   G  + +L   +  G  E V KL     DN  F  +DV
Sbjct: 3   LVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPG--ETVAKLG----DNCRFVPVDV 56

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
                + +     ++ FG+LDI+VN AGI      A T +        +G+   + E  +
Sbjct: 57  TSEKDVKAALALAKAKFGRLDIVVNCAGIA---VAAKTYNK-------KGQQPHSLELFQ 106

Query: 126 KCLQTNYLGAKRMCEALIPLLQ----LSDSAR--IVNVSSS 160
           + +  N +G   +       +          R  I+N +S 
Sbjct: 107 RVINVNLIGTFNVIRLAAGAMGKNEPDQGGERGVIINTASV 147

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 61.6 bits (150), Expect = 4e-11
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 19/156 (12%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-LDVAD 67
             VTGA  GIG     +LA  G    LT RD  G  + V   +  G   V  H+ LD++D
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISD 61

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
             A+ + A  I +  G +D+++N AGI+      D L               T+E   + 
Sbjct: 62  YDAVAAFAADIHAAHGSMDVVMNIAGIS-AWGTVDRL---------------THEQWRRM 105

Query: 128 LQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLG 162
           +  N +G   + E  +P ++       +VNVSS+ G
Sbjct: 106 VDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG 141

Length = 272

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 5e-11
 Identities = 67/288 (23%), Positives = 103/288 (35%), Gaps = 77/288 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
               + + A+VTG   GIG       A  G   V+  RD  GG E V  ++ +G +  +F
Sbjct: 2   SMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGE-ALF 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV   A + ++ +   + +G+LD   NNAGI           G + EG        +
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIE-------QGRLAEG--------S 105

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
               +  +  N  G     +  IPL+       IVN +S  G                  
Sbjct: 106 EAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLG---------------- 149

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYI-LSKAAMNAYTRILAKKYPNFCIN 239
                                +P+   + A+  A I L+K+A   Y    AKK     +N
Sbjct: 150 --------------------AAPKMSIYAASKHAVIGLTKSAAIEY----AKK--GIRVN 183

Query: 240 CVCPGYVKTEMTYNA-----------------GRL-TVEEGAESPVWL 269
            VCP  + T+M   A                 GR+  VEE A + ++L
Sbjct: 184 AVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYL 231

Length = 253

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 21/162 (12%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQ 62
           A + A+VTG+ +G+G+E+ R LA  G   ++  R+      AV  L+ +G   + + F  
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF-- 67

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            D+AD  A+ +    I +  G+LDILVNN G    + D   L+   +  +          
Sbjct: 68  -DIADEEAVAAAFARIDAEHGRLDILVNNVG----ARDRRPLAELDDAAIRA-------- 114

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
                L+T+ +    +       ++     RI+ ++S  G++
Sbjct: 115 ----LLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQV 152

Length = 256

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 60.7 bits (147), Expect = 7e-11
 Identities = 65/253 (25%), Positives = 103/253 (40%), Gaps = 65/253 (25%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M + + R A+VTGA+ GIG E+ R L   G I  L        +E +E L     + V  
Sbjct: 1   MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR----VEKLEALAAELGERVKI 56

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              +++D   + ++     +    +DILVNNAGIT      D L  F+       +M+  
Sbjct: 57  FPANLSDRDEVKALGQKAEADLEGVDILVNNAGIT-----KDGL--FV-------RMSD- 101

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  +  L+ N     R+   L   +      RI+N++S +G    VT            
Sbjct: 102 -EDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVG----VT------------ 144

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                               G+P         A Y  SKA M  +++ LA++    N  +
Sbjct: 145 --------------------GNP-------GQANYCASKAGMIGFSKSLAQEIATRNVTV 177

Query: 239 NCVCPGYVKTEMT 251
           NCV PG++++ MT
Sbjct: 178 NCVAPGFIESAMT 190

Length = 245

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 60.7 bits (148), Expect = 8e-11
 Identities = 58/256 (22%), Positives = 92/256 (35%), Gaps = 74/256 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEK---LKHSGFDNVIFHQ 62
            +AVVTGA  GIG     +LA  G   +L +R  EK  L+AV K    K+          
Sbjct: 2   TWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEK--LDAVAKEIEEKYGV--ETKTIA 57

Query: 63  LDVADPAAIHSVADFIRSHFGKLDI--LVNNAGITGISSDADTLSG-FIEEGVARGKMTQ 119
            D +    I+     I      LDI  LVNN GI      + ++   F+E      ++  
Sbjct: 58  ADFSAGDDIYER---IEKELEGLDIGILVNNVGI------SHSIPEYFLE--TPEDELQD 106

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
                   +  N +   +M   ++P +       IVN+SS  G                 
Sbjct: 107 I-------INVNVMATLKMTRLILPGMVKRKKGAIVNISSFAG----------------- 142

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN 239
                     + +  L                 A Y  SKA ++ ++R L ++Y +  I+
Sbjct: 143 ---------LIPTPLL-----------------ATYSASKAFLDFFSRALYEEYKSQGID 176

Query: 240 --CVCPGYVKTEMTYN 253
              + P  V T+M+  
Sbjct: 177 VQSLLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 9e-11
 Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
          M   A + A+VTG    IG  V R L   G    +   D   G      L         F
Sbjct: 1  MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGER----ARF 56

Query: 61 HQLDVADPAAI-HSVADFIRSHFGKLDILVNNA 92
             D+ D AAI  +VA  + + FG++DILVN A
Sbjct: 57 IATDITDDAAIERAVATVV-ARFGRVDILVNLA 88

Length = 261

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 60.2 bits (146), Expect = 1e-10
 Identities = 61/244 (25%), Positives = 90/244 (36%), Gaps = 69/244 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA +GIG  V R L   G    + A D    L  V  L++     +    LDVAD 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAG--ATVIALD----LPFVLLLEYGDPLRLT--PLDVADA 52

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           AA+  V   + +  G +D LVN AG+    +  D LS                E  E+  
Sbjct: 53  AAVREVCSRLLAEHGPIDALVNCAGVLRPGA-TDPLST---------------EDWEQTF 96

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G   + +A+ P ++   +  IV V+S+           A  V             
Sbjct: 97  AVNVTGVFNLLQAVAPHMKDRRTGAIVTVASN-----------AAHV------------- 132

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC--VCPGYV 246
                         P       + AAY  SKAA+ + ++ L  +   + + C  V PG  
Sbjct: 133 --------------PRI-----SMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGST 173

Query: 247 KTEM 250
            T M
Sbjct: 174 DTAM 177

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 50/156 (32%), Positives = 70/156 (44%), Gaps = 24/156 (15%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG + GIG  +       G     TAR      E VE L  +GF  V   QLDV D 
Sbjct: 4   VLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGFTAV---QLDVNDG 56

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           AA+  +A+ + +  G LD+L+NNAG   +      L G +E       M + +E      
Sbjct: 57  AALARLAEELEAEHGGLDVLINNAGYGAMGP---LLDGGVEA------MRRQFE------ 101

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            TN      +  AL PLL+ S    +VN+ S  G L
Sbjct: 102 -TNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVL 135

Length = 274

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 52/196 (26%)

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
           F Q D+ DPA+I +    +    G++D L N AG+ G    A          VAR     
Sbjct: 27  FIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT---APVEL------VAR----- 69

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
                      N+LG + + EAL+P  +++    IVNV+S  G       EW + +    
Sbjct: 70  ----------VNFLGLRHLTEALLP--RMAPGGAIVNVASLAG------AEWPQRLELHK 111

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC-- 237
                   DE    +L  +           A A  Y LSK A+  +T  + +  P F   
Sbjct: 112 ALAATASFDEGA-AWLAAHPV---------ALATGYQLSKEALILWT--MRQAQPWFGAR 159

Query: 238 ---INCVCPGYVKTEM 250
              +NCV PG V T +
Sbjct: 160 GIRVNCVAPGPVFTPI 175

Length = 241

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 61/237 (25%), Positives = 85/237 (35%), Gaps = 62/237 (26%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           +VTG + GIG  +V++L  NG   V    D  GG       +H   +N  F   DV+   
Sbjct: 13  IVTGGSSGIGLAIVKELLANGANVVNA--DIHGG-----DGQH---ENYQFVPTDVSSAE 62

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
            ++     I   FG++D LVNNAGI       D       E    GK      + +K   
Sbjct: 63  EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVD-------EKDPAGKYELNEAAFDKMFN 115

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDE 189
            N  G   M +A+   +       IVN+SS  G                           
Sbjct: 116 INQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG--------------------------- 148

Query: 190 VLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV--CPG 244
                     EGS          + Y  +KAA+N++TR  AK+     I  V   PG
Sbjct: 149 ---------LEGS-------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPG 189

Length = 266

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)

Query: 5  AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
          A +  ++TG+ +GIG+ +   LA  G   ++     +    AV KL+  G         +
Sbjct: 8  AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAA-PFN 66

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          V     + +  + I    G +D+L+NNAGI
Sbjct: 67 VTHKQEVEAAIEHIEKDIGPIDVLINNAGI 96

Length = 254

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 58.6 bits (142), Expect = 4e-10
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 27/169 (15%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR----DEKGGLEAVEKLKHSGFDNV-- 58
           + + A VTGA++GIG  +  +LA  G   V+ A+     + G  +++        + +  
Sbjct: 2   SGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEA 61

Query: 59  -----IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVA 113
                +   +DV D   + ++ +     FG+LDILVNNAG   +S   DT +        
Sbjct: 62  AGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPA-------K 114

Query: 114 RGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
           R  + Q         + N  G   + +A +P +  +    I+N+S  L 
Sbjct: 115 RFDLMQ---------RVNLRGTYLLSQAALPHMVKAGQGHILNISPPLS 154

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 19/156 (12%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           VTGA  G G  + R+    G   + T R +    E +++LK    DN+   QLDV + AA
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRNRAA 60

Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQT 130
           I  +   + + +  +D+LVNNAG+      A   S                E  E  + T
Sbjct: 61  IEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKAS---------------VEDWETMIDT 105

Query: 131 NYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
           N  G   M  A++P +   +   I+N+ S+ G   Y
Sbjct: 106 NNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY 141

Length = 248

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 58.0 bits (141), Expect = 6e-10
 Identities = 64/276 (23%), Positives = 94/276 (34%), Gaps = 89/276 (32%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTG  +GIG  + R     G   V+  R     ++              FH  DV 
Sbjct: 7   RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRP---------AEFHAADVR 57

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DP  + ++ D I    G+LD+LVNNAG +  +  A+    F                 EK
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRF----------------HEK 101

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
            ++ N L    + +A   ++Q       IVN+ S  G                       
Sbjct: 102 IVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG----------------------- 138

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPG 244
                        +  SP T       AAY  +KA +   TR LA ++ P   +N V  G
Sbjct: 139 -------------RRPSPGT-------AAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVG 178

Query: 245 YVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGL 280
            V+TE                    + LH G   G+
Sbjct: 179 LVRTE-------------------QSELHYGDAEGI 195

Length = 252

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 58.1 bits (141), Expect = 8e-10
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 3/95 (3%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE-AVEKLKHSGFDNVI 59
          M + A + AV+TGA  G G    R  A  G+  VL A  ++  L+ AV +L+  G + V+
Sbjct: 1  MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVL-ADVQQDALDRAVAELRAQGAE-VL 58

Query: 60 FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
            + DV+D A + ++AD     FG + +L NNAG+
Sbjct: 59 GVRTDVSDAAQVEALADAALERFGAVHLLFNNAGV 93

Length = 287

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 9e-10
 Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 20/156 (12%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TGA+ G G  +  +L   G     T R      +A++ LK    D +   QLDV D AA
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRR----PDALDDLKARYGDRLWVLQLDVTDSAA 62

Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQT 130
           + +V D   +  G++D++V+NAG  G+   A+ LS                    + + T
Sbjct: 63  VRAVVDRAFAALGRIDVVVSNAGY-GLFGAAEELSD---------------AQIRRQIDT 106

Query: 131 NYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
           N +G+ ++  A +P L+     RIV VSS  G++ Y
Sbjct: 107 NLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAY 142

Length = 276

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 57.5 bits (139), Expect = 1e-09
 Identities = 67/278 (24%), Positives = 94/278 (33%), Gaps = 73/278 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TG   GIG    R  A +G   V+   D+  G     +L   G  ++ F   DV 
Sbjct: 5   KVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAEL---GDPDISFVHCDVT 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             A + +  D   + FG+LDI+ NNAG+ G           I E           E  E+
Sbjct: 62  VEADVRAAVDTAVARFGRLDIMFNNAGVLG------APCYSILETSL--------EEFER 107

Query: 127 CLQTN----YLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM-YVTHEWAKGVFSDAEN 181
            L  N    +LG K     +IP    +    IV+V+S  G +     H            
Sbjct: 108 VLDVNVYGAFLGTKHAARVMIP----AKKGSIVSVASVAGVVGGLGPH------------ 151

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--N 239
                                           AY  SK A+   TR  A +     I  N
Sbjct: 152 --------------------------------AYTASKHAVLGLTRSAATELGEHGIRVN 179

Query: 240 CVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGP 277
           CV P  V T +      +  E   E+    A L KG  
Sbjct: 180 CVSPYGVATPLLTAGFGVEDEAIEEAVRGAANL-KGTA 216

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          +  V+TG + G+G  +  +        V+  R DE+   +  E++K +G + +     DV
Sbjct: 8  KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG-DV 66

Query: 66 ADPAAIHSVADFIRSHFGKLDILVNNAGI 94
             + + ++       FG LD+++NNAGI
Sbjct: 67 TVESDVVNLIQTAVKEFGTLDVMINNAGI 95

Length = 261

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 56/244 (22%), Positives = 95/244 (38%), Gaps = 64/244 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVAD 67
            VVTG+ +GIG  +  +LA  G + V+ A+       E ++ +K +G + +     DV+ 
Sbjct: 9   VVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGV-LADVST 67

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
                ++A      +G  DILVNNAG+ G+ S       F+       K+       +K 
Sbjct: 68  REGCETLAKATIDRYGVADILVNNAGL-GLFSP------FLN---VDDKLI------DKH 111

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           + T++       + L    ++ +   IVN++S  G                         
Sbjct: 112 ISTDFKSVIYCSQELAK--EMREGGAIVNIASVAGIRPAYG------------------- 150

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYV 246
              LS Y                  A     KAA+   T+ LA +  P   +N + PG+V
Sbjct: 151 ---LSIY-----------------GAM----KAAVINLTKYLALELAPKIRVNAIAPGFV 186

Query: 247 KTEM 250
           KT++
Sbjct: 187 KTKL 190

Length = 252

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 24/157 (15%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGF--DNVIFHQL 63
           + A+VTGA++GIG  + + LA  G   ++++R   G  +AV + +  +G   + +  H  
Sbjct: 9   KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDG-CQAVADAIVAAGGKAEALACH-- 65

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
            + +   I ++   IR   G+LDILVNNA        A+   G I +         T   
Sbjct: 66  -IGEMEQIDALFAHIRERHGRLDILVNNAA-------ANPYFGHILD---------TDLG 108

Query: 124 A-EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           A +K +  N  G   M      L++      IVNV+S
Sbjct: 109 AFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS 145

Length = 252

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 40/161 (24%), Positives = 63/161 (39%), Gaps = 19/161 (11%)

Query: 5   AKRYAVVTGA-NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           A +  +VT A   GIG    R+    G   V++   E+   E  ++L        +   +
Sbjct: 16  AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVV 75

Query: 64  -DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            DV   A + ++ D      G+LD+LVNNAG+ G +   D              MT   +
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVD--------------MTD--D 119

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLG 162
              + L     G  R   A +  ++       IVN +S LG
Sbjct: 120 EWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLG 160

Length = 262

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 3e-09
 Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 19/163 (11%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M        V+TGA+ GIG       A  G   VL ARDE+      E+ +  G + V+ 
Sbjct: 2   MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAE-VLV 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV D   + ++A    S  G++D+ VNN G+                  A G+  +T
Sbjct: 61  VPTDVTDADQVKALATQAASFGGRIDVWVNNVGVG-----------------AVGRFEET 103

Query: 121 -YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
             E+ E+ +QTN +G  R   A +P+ +       +N+ S  G
Sbjct: 104 PIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGG 146

Length = 330

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 43/164 (26%), Positives = 65/164 (39%), Gaps = 29/164 (17%)

Query: 4   TAKRY----AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL--EAVEKLKHSGFDN 57
             +R+     VVTGA +GIG  V  + A  G   VL  R E   L  E   +L+ +G + 
Sbjct: 2   MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE---LVHEVAAELRAAGGEA 58

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
           +     D+   A   +        FG++D+L+NN G                 G    K 
Sbjct: 59  LALTA-DLETYAGAQAAMAAAVEAFGRIDVLINNVG-----------------GTIWAKP 100

Query: 118 TQTYESA--EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
            + YE    E  ++ +       C A++P +       IVNVSS
Sbjct: 101 FEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSS 144

Length = 260

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 55.7 bits (135), Expect = 4e-09
 Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 28/164 (17%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG    +G  + ++LA  G    +  R+++     V ++K +G +  +  + DV D 
Sbjct: 13  AVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGE-ALAVKADVLDK 71

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY-----ES 123
            ++      I   FG  DIL+N AG  G    A T      E     + T+T+     E 
Sbjct: 72  ESLEQARQQILEDFGPCDILINGAG--GNHPKATT----DNEFHELIEPTKTFFDLDEEG 125

Query: 124 AEKCLQTNYLG--------AKRMCEALIPLLQLSDSARIVNVSS 159
            E     N LG        AK M               I+N+SS
Sbjct: 126 FEFVFDLNLLGTLLPTQVFAKDMVGR--------KGGNIINISS 161

Length = 278

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 55.6 bits (134), Expect = 4e-09
 Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 21/155 (13%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  VVTGA +GIG  V  +LA  G   +L  R E    E + ++  +G D    H  D+ 
Sbjct: 5   KVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSEL-VHEVLAEILAAG-DAAHVHTADLE 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA-- 124
             A    V       FG++D+L+NN G                 G    K  + YE    
Sbjct: 63  TYAGAQGVVRAAVERFGRVDVLINNVG-----------------GTIWAKPYEHYEEEQI 105

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           E  ++ +       C A++P +       IVNVSS
Sbjct: 106 EAEIRRSLFPTLWCCRAVLPHMLERQQGVIVNVSS 140

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 4e-09
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
          M     + A++TGA  GIG  V  +    G   V+          A  ++        I 
Sbjct: 1  MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGP----AAIA 56

Query: 61 HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
            LDV    +I  +       FG +DIL NNA +
Sbjct: 57 VSLDVTRQDSIDRIVAAAVERFGGIDILFNNAAL 90

Length = 257

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 55.5 bits (134), Expect = 4e-09
 Identities = 42/154 (27%), Positives = 71/154 (46%), Gaps = 23/154 (14%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH--QLDVADP 68
           +TG   GIG  + ++    G   ++  R+E       E+L  +  +N   H    DVAD 
Sbjct: 10  ITGGASGIGLALAKRFLELGNTVIICGRNE-------ERLAEAKAENPEIHTEVCDVADR 62

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            +   + ++++  +  L++L+NNAGI       + L+G  E+           + AE+ +
Sbjct: 63  DSRRELVEWLKKEYPNLNVLINNAGI----QRNEDLTG-AED---------LLDDAEQEI 108

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
            TN L   R+   L+P L     A I+NVSS L 
Sbjct: 109 ATNLLAPIRLTALLLPHLLRQPEATIINVSSGLA 142

Length = 245

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 8e-09
 Identities = 63/319 (19%), Positives = 108/319 (33%), Gaps = 87/319 (27%)

Query: 6   KRYAVVTGANKGIGYEVVRQL-----ALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           ++  +VTGAN G+G  +  +L         +  +L  R+ +    A   L  S  D  + 
Sbjct: 1   RKVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVV 60

Query: 61  H---QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIE-------- 109
                +D+++  ++ + A  ++  + +LD L  NAGI   +   D +    E        
Sbjct: 61  FDYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGI-MPNPGIDWIGAIKEVLTNPLFA 119

Query: 110 ----------EGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVS 158
                     EG+       T +   +  QTN  G   +   L PLL  SD  ++I+  S
Sbjct: 120 VTNPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTS 179

Query: 159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILS 218
           S                 +  +  +           L D +             A Y  S
Sbjct: 180 SLN---------------ASPKYFS-----------LEDIQHLKGP--------APYSSS 205

Query: 219 KAAMNAYTRILAKKYPNFCIN--CVCPGYVKTEMTY-----------------------N 253
           K  ++  +  L +K+    +    V PG   T +TY                        
Sbjct: 206 KYLVDLLSLALNRKFNKLGVYSYVVHPGICTTNLTYGILPPFTWTLALPLFYLLRRLGSP 265

Query: 254 AGRLTVEEGAESPVWLALL 272
              ++   GAE+ VWLAL 
Sbjct: 266 WHTISPYNGAEALVWLALQ 284

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 54.8 bits (132), Expect = 9e-09
 Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 9/91 (9%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQL-- 63
          + A+VTGAN G+G  +   LA  G   V   R E     + VE L         F  L  
Sbjct: 6  KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGR------RFLSLTA 59

Query: 64 DVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          D++D  AI ++ D     FG +DILVNNAGI
Sbjct: 60 DLSDIEAIKALVDSAVEEFGHIDILVNNAGI 90

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 9e-09
 Identities = 54/264 (20%), Positives = 90/264 (34%), Gaps = 92/264 (34%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           RY ++TG ++G+G  +  QL   G   +  +R E   L  + +  +S      FH LD+ 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNL---TFHSLDLQ 58

Query: 67  DPAAIHS-VADFIRSHFGKLD---ILVNNAGI-TGISSDADTLSGFIEEGVARGKMTQTY 121
           D   + +   + + S          L+NNAG+   I          IE+           
Sbjct: 59  DVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKP--------IEKA---------- 100

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLL----------QLSDSARIVNVSSSLGKLMYVTHEW 171
             +E+ L TN          L P++                R++N+SS   K  Y     
Sbjct: 101 -ESEE-LITNV-----HLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY----- 148

Query: 172 AKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA- 230
                                              GW    +AY  SKA ++ +T+ +A 
Sbjct: 149 ----------------------------------FGW----SAYCSSKAGLDMFTQTVAT 170

Query: 231 ----KKYPNFCINCVCPGYVKTEM 250
               ++YP   +    PG + T M
Sbjct: 171 EQEEEEYPVKIVA-FSPGVMDTNM 193

Length = 251

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 5  AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
          A +  ++TGA+KGIG       A  G    L ARD          L+ +   +V  H LD
Sbjct: 6  AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALD 65

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAG 93
          ++ P A   +A       G +DILVNNAG
Sbjct: 66 LSSPEAREQLAAEA----GDIDILVNNAG 90

Length = 259

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 54.4 bits (131), Expect = 1e-08
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG N G+G      LA  G   ++T        +   +L       V F Q+D+ 
Sbjct: 16  KVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT--NWDETRRLIEKEGRKVTFVQVDLT 73

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGI 94
            P +   V       FGK+DILVNNAG 
Sbjct: 74  KPESAEKVVKEALEEFGKIDILVNNAGT 101

Length = 258

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 54.2 bits (131), Expect = 1e-08
 Identities = 56/241 (23%), Positives = 82/241 (34%), Gaps = 64/241 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-LEAVEKLKHSGFDNVIFHQLDV 65
             A+VTGA K IG  +   LA  G   V+     +       ++L       V+  Q D+
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLV-QADL 59

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D AA   +       FG+ D+LVNNA            S F         + Q  E A 
Sbjct: 60  SDFAACADLVAAAFRAFGRCDVLVNNA------------SAFYPT-----PLGQGSEDAW 102

Query: 126 KCL-QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
             L   N      + +A    L  S +  I+N+                           
Sbjct: 103 AELFGINLKAPYLLIQAFARRLAGSRNGSIINI--------------------------- 135

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCP 243
             +D +  + L  Y               AY +SKAA+   TR  A +  PN  +N + P
Sbjct: 136 --IDAMTDRPLTGY--------------FAYCMSKAALEGLTRSAALELAPNIRVNGIAP 179

Query: 244 G 244
           G
Sbjct: 180 G 180

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 23/143 (16%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
            +R A+V GA+ GIG     +LA  G    L AR  +   E V+K++  G + V F  LD
Sbjct: 9   DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFP-LD 67

Query: 65  VADPAAIHSVADFI---RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
           V DP    SV  F+       G++++LV+ AG        DT  G + E         + 
Sbjct: 68  VTDPD---SVKSFVAQAEEALGEIEVLVSGAG--------DTYFGKLHE--------IST 108

Query: 122 ESAEKCLQTNYLGAKRMCEALIP 144
           E  E  +Q + +GA R+  A++P
Sbjct: 109 EQFESQVQIHLVGANRLATAVLP 131

Length = 274

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 62/251 (24%), Positives = 86/251 (34%), Gaps = 72/251 (28%)

Query: 10  VVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           V+TGA  GIG      L   G  +I +    D +                      D++ 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGI----DLREA----------------DVIADLST 42

Query: 68  PAAIHS-VADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           P    + +AD +    G LD LVN AG+ G +     L                      
Sbjct: 43  PEGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGLVLK--------------------- 81

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL---T 183
               NY G + + EAL+P L+       V VSS  G        WA+     A+ L   T
Sbjct: 82  ---VNYFGLRALMEALLPRLRKGHGPAAVVVSSIAG------AGWAQDKLELAKALAAGT 132

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PNFCINC 240
           E R   +             E  G P    AY  SK A+  +TR  A  +       +N 
Sbjct: 133 EARAVALA------------EHAGQPGY-LAYAGSKEALTVWTRRRAATWLYGAGVRVNT 179

Query: 241 VCPGYVKTEMT 251
           V PG V+T + 
Sbjct: 180 VAPGPVETPIL 190

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 53.7 bits (129), Expect = 2e-08
 Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 20/156 (12%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           +  ++TG   G+G     +LA  G    L   +E+G   A   L     D  V+  + DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D A + +  D     FG++D   NNAGI G                 +  +T+ + + E
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEG-----------------KQNLTEDFGADE 106

Query: 126 --KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
             K +  N  G     E ++ +++   S  IVN +S
Sbjct: 107 FDKVVSINLRGVFYGLEKVLKVMREQGSGMIVNTAS 142

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 53.5 bits (128), Expect = 2e-08
 Identities = 62/253 (24%), Positives = 98/253 (38%), Gaps = 71/253 (28%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVL-----TARDEKGGLEAVEKLKHSGFDNVI 59
           ++R A VTG   GIG  + ++L  +G   V      + R  K     +E  K  GFD  I
Sbjct: 2   SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKW----LEDQKALGFD-FI 56

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             + +V D  +  +  D +++  G++D+LVNNAGIT                V   KMT+
Sbjct: 57  ASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGIT--------------RDVVFRKMTR 102

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             E     + TN      + + +I  +      RI+N+SS  G+         KG F   
Sbjct: 103 --EDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ---------KGQFGQT 151

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FC 237
                                              Y  +KA ++ +T  LA++       
Sbjct: 152 N----------------------------------YSTAKAGIHGFTMSLAQEVATKGVT 177

Query: 238 INCVCPGYVKTEM 250
           +N V PGY+ T+M
Sbjct: 178 VNTVSPGYIGTDM 190

Length = 246

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIF 60
              A+R A VTG   GIG E  R+LA  G   VL   + E     A E     G    + 
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA 469

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDAD 102
            ++DV D  A+ +    +   +G +DI+VNNAGI   SS  +
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA-TSSPFE 510

Length = 676

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 54/260 (20%), Positives = 94/260 (36%), Gaps = 69/260 (26%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARD--EKGGLEAVEKLKHSGFDNVIFHQL 63
           KR A++ GA++G+G  +V +L   G     T R   +   L+A+          V   +L
Sbjct: 1   KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQAL--------PGVHIEKL 52

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D+ DPA++  +   ++    + D+L  NAGI+G  +                ++ Q +  
Sbjct: 53  DMNDPASLDQLLQRLQGQ--RFDLLFVNAGISG-PAHQSA------ADATAAEIGQLF-- 101

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
                 TN +   R+   L+  ++      +  +SS LG +                   
Sbjct: 102 -----LTNAIAPIRLARRLLGQVR-PGQGVLAFMSSQLGSV------------------- 136

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV 241
                                          Y  SKAA+N+ TR    +   P   +  +
Sbjct: 137 ---------------------ELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSM 175

Query: 242 CPGYVKTEMTYNAGRLTVEE 261
            PG+VKT+M  +   L VE 
Sbjct: 176 HPGWVKTDMGGDNAPLDVET 195

Length = 225

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 53.7 bits (129), Expect = 3e-08
 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 19/160 (11%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           K   V+TGA+ G+G    + LA  G   V+ A RD     +A +++        + H  D
Sbjct: 1   KGTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLH-CD 59

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           +A   ++    D  R     LD LV NA +  + +  +    F  +G             
Sbjct: 60  LASLDSVRQFVDNFRRTGRPLDALVCNAAVY-LPTAKEPR--FTADGF------------ 104

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNVSSSLG 162
           E  +  N+LG   +   L+  LQ S+  S RIV V S   
Sbjct: 105 ELTVGVNHLGHFLLTNLLLEDLQRSENASPRIVIVGSITH 144

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 53.0 bits (127), Expect = 3e-08
 Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 4/88 (4%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + A+VTG   GIG ++       G   V    DE+ G +  E        N+ F   DVA
Sbjct: 2  KVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG----PNLFFVHGDVA 57

Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGI 94
          D   +  V   +    G++D+LVNNA  
Sbjct: 58 DETLVKFVVYAMLEKLGRIDVLVNNAAR 85

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 52.8 bits (127), Expect = 3e-08
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 24/160 (15%)

Query: 10  VVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           ++TG + GIG  +  +LA +         T RD K      E         +   QLDV 
Sbjct: 4   LITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQLDVC 63

Query: 67  DPAAIHSVADFIRSHFGK-LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           D     SVA  +     + +D+LV NAG+         L G +E          + ++  
Sbjct: 64  DS---KSVAAAVERVTERHVDVLVCNAGVG--------LLGPLE--------ALSEDAMA 104

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM 165
                N  G  RM +A +P ++   S RI+ V+SS+G L 
Sbjct: 105 SVFDVNVFGTVRMLQAFLPDMKRRGSGRIL-VTSSVGGLQ 143

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 4e-08
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 1/86 (1%)

Query: 9  AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
          A++TGA+ GIG+ + +  A  G   V    +++   + +   +  G +   +   DV D 
Sbjct: 13 ALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGY-VCDVTDE 71

Query: 69 AAIHSVADFIRSHFGKLDILVNNAGI 94
            + ++   I    G +DILVNNAGI
Sbjct: 72 DGVQAMVSQIEKEVGVIDILVNNAGI 97

Length = 265

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 52.2 bits (126), Expect = 4e-08
 Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           +  A++TGA++GIG  + R+LA    + +L  R     L+ +     +         +D+
Sbjct: 3   RPTALITGASRGIGAAIARELAPTHTL-LLGGRPA-ERLDELA----AELPGATPFPVDL 56

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT 103
            DP AI +         G+LD+LV+NAG+  +   A++
Sbjct: 57  TDPEAIAAAV----EQLGRLDVLVHNAGVADLGPVAES 90

Length = 227

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 9  AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
          A+VTG   GIG  + ++LA  G   V+   D +   +  E  +  G    +  Q DV   
Sbjct: 4  ALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQ--GGPRALGVQCDVTSE 61

Query: 69 AAIHSVADFIRSHFGKLDILVNNAGI 94
          A + S  +     FG LDI+V+NAGI
Sbjct: 62 AQVQSAFEQAVLEFGGLDIVVSNAGI 87

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 52.6 bits (127), Expect = 5e-08
 Identities = 59/250 (23%), Positives = 86/250 (34%), Gaps = 74/250 (29%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS--GFDNVIFHQLDVAD 67
            +TGA+ GIG  + R+ A  G    L AR      +A++           V  +  DV D
Sbjct: 6   FITGASSGIGQALAREYARQGATLGLVARRT----DALQAFAARLPKAARVSVYAADVRD 61

Query: 68  PAAIHSVA-DFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             A+ + A DFI +  G  D+++ NA   GIS    T     EE        +  +    
Sbjct: 62  ADALAAAAADFI-AAHGLPDVVIANA---GISVGTLT-----EEREDLAVFREVMD---- 108

Query: 127 CLQTNYLGAKRMCEALIPLL---QLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
              TNY G   M     P +   + +    +V ++S  G                     
Sbjct: 109 ---TNYFG---MVATFQPFIAPMRAARRGTLVGIASVAG--------------------- 141

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV-- 241
                                 +G P  A AY  SKAA   Y   L  +     +  V  
Sbjct: 142 ---------------------VRGLPG-AGAYSASKAAAIKYLESLRVELRPAGVRVVTI 179

Query: 242 CPGYVKTEMT 251
            PGY++T MT
Sbjct: 180 APGYIRTPMT 189

Length = 257

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 52.2 bits (125), Expect = 6e-08
 Identities = 60/253 (23%), Positives = 88/253 (34%), Gaps = 64/253 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTG ++GIG      LA  G  + V   ++     E V  +  +G    +  Q D++D
Sbjct: 4   ALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVL-QADISD 62

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              + ++   I  H   L  LVNNAGI       + L+                E   + 
Sbjct: 63  ENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTA---------------ERINRV 107

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSAR---IVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           L TN  G    C   +  + L        IVNVSS+  +L                    
Sbjct: 108 LSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL-------------------- 147

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                 G P     Y  SK A++  T  L+ +     I  NCV 
Sbjct: 148 ----------------------GAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVR 185

Query: 243 PGYVKTEMTYNAG 255
           PG++ TEM  + G
Sbjct: 186 PGFIYTEMHASGG 198

Length = 247

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 52.2 bits (126), Expect = 6e-08
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVI 59
          M   + + A++TG  + IG  + R L   G    +         +A   +L      +  
Sbjct: 1  MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAA 60

Query: 60 FHQLDVADPAAIHSVADFIRSHFGKLDILVNNA 92
            Q D+ DP A+  +     + FG+LD LVNNA
Sbjct: 61 ALQADLLDPDALPELVAACVAAFGRLDALVNNA 93

Length = 249

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 51.4 bits (123), Expect = 1e-07
 Identities = 49/243 (20%), Positives = 85/243 (34%), Gaps = 63/243 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TGA  GIG E+    A  G   V++  +       V++++  G       + D+   
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSE 72

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + ++ADF  S  GK+DILVNNAG  G       ++ F                  +  
Sbjct: 73  QELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFR-----------------RAY 115

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N      + + + P ++ +    I+ ++S                    EN       
Sbjct: 116 ELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA-----------------ENKN----- 153

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                                 N  +Y  SKAA +   R +A      N  +N + PG +
Sbjct: 154 ---------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI 192

Query: 247 KTE 249
            T+
Sbjct: 193 LTD 195

Length = 255

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 10 VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL-KHSGFDNVIFHQLDVADP 68
          ++TGA   IG  +V+ +   G I +    D++   E +E L K      +   +LD+ D 
Sbjct: 8  LITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ 67

Query: 69 AAIHSVADFIRSHFGKLDILVNNA 92
           ++          +GK+D  VN A
Sbjct: 68 ESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 1e-07
 Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 10 VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
          ++TG + G+G  + ++ A  G   V+T R ++   EA  +++      V+  Q+DV +P 
Sbjct: 5  IITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPE 63

Query: 70 AIHSVADFIRSHFGKLDILVNNA 92
           +  + + I   FG++D L+NNA
Sbjct: 64 DVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 2e-07
 Identities = 47/161 (29%), Positives = 66/161 (40%), Gaps = 28/161 (17%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
            KR  ++TG + GIG    R L  +G     T R E    E V  L+  G +     QLD
Sbjct: 3   MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE----EDVAALEAEGLEA---FQLD 55

Query: 65  VADPAAIHS-VADFIRSHFGKLDILVNNA--GITGISSDADTLSGFIEEGVARGKMTQTY 121
            A+P +I + VA  +    G+LD L NN   G  G   D  T                  
Sbjct: 56  YAEPESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPT------------------ 97

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
           E+     + N+ G   +   +IP+++     RIV  SS LG
Sbjct: 98  EALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138

Length = 277

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 66/288 (22%), Positives = 99/288 (34%), Gaps = 80/288 (27%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQL 63
            ++  ++TGA++GIG       A  G    L     +   EAV + ++  G    +    
Sbjct: 1   MRKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-GEALAVAA 59

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DVAD A +  + + +    G+LD LVNNAGI       + +        AR         
Sbjct: 60  DVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMD------AAR--------- 104

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSAR---IVNVSSSLGKLMYVTHEWAKGVFSDAE 180
             +   TN +G+       +  +      R   IVNVSS   +L                
Sbjct: 105 LTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL---------------- 148

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                     G P     Y  SK A++  T  LAK+     I  
Sbjct: 149 --------------------------GSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182

Query: 239 NCVCPGYVKTEMTYNAG------RL----------TVEEGAESPVWLA 270
           N V PG + TE+  + G      R+          T EE A + +WL 
Sbjct: 183 NAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLL 230

Length = 248

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.0 bits (120), Expect = 3e-07
 Identities = 56/247 (22%), Positives = 83/247 (33%), Gaps = 76/247 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA  GIG    R     G            G++  +K   SG  N  F QLD++
Sbjct: 6   KTVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQDKPDLSG--NFHFLQLDLS 55

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D      + D++      +DIL N AGI         L  +      +  +  + E  + 
Sbjct: 56  DDLE--PLFDWV----PSVDILCNTAGI---------LDDY------KPLLDTSLEEWQH 94

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
              TN      +  A +P +    S  I+N+ S    +       A G            
Sbjct: 95  IFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV-------AGG------------ 135

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                     AAY  SK A+  +T+ LA  Y    I    + PG
Sbjct: 136 ------------------------GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPG 171

Query: 245 YVKTEMT 251
            VKT MT
Sbjct: 172 AVKTPMT 178

Length = 235

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG   GIG  +VR    +G    +    +  G    + L   G  NV F   DV   
Sbjct: 21  ALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSL--GGEPNVCFFHCDVTVE 78

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITG 96
             +    DF    FG LDI+VNNAG+TG
Sbjct: 79  DDVSRAVDFTVDKFGTLDIMVNNAGLTG 106

Length = 280

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 46/153 (30%), Positives = 68/153 (44%), Gaps = 18/153 (11%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIF-HQLDVA 66
           A +TGA  G+G  + R++A  G    LT  ++  GL+A   ++  +  + V F    DV 
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A   ++        G L +LVNNAG+    +        IE    R  M    ES   
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQ-----IELDEWRRVMAINVESI-- 114

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
                +LG    C+  +P L+ S  A IVN+SS
Sbjct: 115 -----FLG----CKHALPYLRASQPASIVNISS 138

Length = 251

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 50.1 bits (120), Expect = 3e-07
 Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 3/88 (3%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDV 65
          + A+VTGA++GIG  +  QL   G    +T R     L    E+++  G    I  + D 
Sbjct: 4  KIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARG-GKCIPVRCDH 62

Query: 66 ADPAAIHSVADFIRSHF-GKLDILVNNA 92
          +D   + ++ + +     G+LDILVNNA
Sbjct: 63 SDDDEVEALFERVAREQQGRLDILVNNA 90

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 49.9 bits (119), Expect = 3e-07
 Identities = 74/286 (25%), Positives = 101/286 (35%), Gaps = 91/286 (31%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTGA +GIG  +   L   G   VL   D + G +  + L     +N  F  +DVA
Sbjct: 11  RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG----ENAWFIAMDVA 66

Query: 67  DPAAI-HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           D A +   VA+ +   FG+LD LV NA I      AD                 T ES  
Sbjct: 67  DEAQVAAGVAEVLG-QFGRLDALVCNAAI------AD-------------PHNTTLESLS 106

Query: 126 -----KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
                + L  N  G   + +   P L+  + A IVN++S                     
Sbjct: 107 LAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGA-IVNLAS--------------------- 144

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN 239
             T  R  E                     +  AY  SK  + A T  LA    P   +N
Sbjct: 145 --TRARQSE--------------------PDTEAYAASKGGLLALTHALAISLGPEIRVN 182

Query: 240 CVCPGYVKT---------------EMTYNAGRL-TVEEGAESPVWL 269
            V PG++                    + AGR+ TVE+ A    WL
Sbjct: 183 AVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWL 228

Length = 255

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 6e-07
 Identities = 53/246 (21%), Positives = 76/246 (30%), Gaps = 59/246 (23%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A VTGA  GIG  +   LA  G    L       GL    +   +     I    DV 
Sbjct: 9   QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVT 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             A + +      +  G L + VN AGI                  A        E  + 
Sbjct: 69  SKADLRAAVARTEAELGALTLAVNAAGIAN----------------ANPAEEMEEEQWQT 112

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G    C+A    +  +    IVN++S  G +                      
Sbjct: 113 VMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII---------------------- 150

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
           V+  L Q                   A Y  SKA +   ++ LA ++    I  N + PG
Sbjct: 151 VNRGLLQ-------------------AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPG 191

Query: 245 YVKTEM 250
           Y  T M
Sbjct: 192 YTATPM 197

Length = 254

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 49.1 bits (118), Expect = 6e-07
 Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 16/145 (11%)

Query: 16  KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVA 75
             I + + +  A  G   VLT       + AV++L      +VI   LDV     I  + 
Sbjct: 6   NSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVIP--LDVTSDEDIDELF 63

Query: 76  DFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGA 135
           + ++   GK+D LV++  ++             E    +  +  + E   K L  +    
Sbjct: 64  EKVKEDGGKIDFLVHSIAMSP------------EIRKGKPYLDTSREGFLKALDISAYSF 111

Query: 136 KRMCEALIPLLQLSDSARIVNVSSS 160
             + +A  PL  +++   IV +S  
Sbjct: 112 ISLAKAAKPL--MNEGGSIVALSYI 134

Length = 239

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 3/99 (3%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
            KR A+VTGA  GIG  + R+    G   +    D        + L   G    +    D
Sbjct: 1   TKRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADAL---GDARFVPVACD 57

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT 103
           + D A++ +      +  G +D+LV NAG    +S  DT
Sbjct: 58  LTDAASLAAALANAAAERGPVDVLVANAGAARAASLHDT 96

Length = 257

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 30/177 (16%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           ++TG + GIG E   +L   G   +   R      + V ++   GF  +    LD+ DP 
Sbjct: 6   LITGCSSGIGLEAALELKRRGYRVLAACRKP----DDVARMNSLGFTGI---LLDLDDPE 58

Query: 70  AI-HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           ++  +  + I     +L  L NNAG  G+     T+S        R +M       E+  
Sbjct: 59  SVERAADEVIALTDNRLYGLFNNAGF-GVYGPLSTIS--------RQQM-------EQQF 102

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL------MYVTHEWAKGVFSDA 179
            TN+ G  ++   L+P +      RIV  SS +G +       Y   ++A   +SDA
Sbjct: 103 STNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDA 159

Length = 256

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 56/245 (22%), Positives = 87/245 (35%), Gaps = 63/245 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A++TG + GIG  V    A  G  + +    +E+   E  +KL        +    D+
Sbjct: 27  KKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPGDL 86

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D +    +   +   FGKLDILVNNA         + +               T E  E
Sbjct: 87  GDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDI---------------TTEQLE 131

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K  +TN      + +A +P L+    + I+N +S                          
Sbjct: 132 KTFRTNIFSMFYLTKAALPHLK--KGSSIINTTS-------------------------- 163

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                    +  YK GSP           Y  +K A+ A+TR L+ +     I  N V P
Sbjct: 164 ---------VTAYK-GSPH-------LLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAP 206

Query: 244 GYVKT 248
           G + T
Sbjct: 207 GPIWT 211

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 53/245 (21%), Positives = 83/245 (33%), Gaps = 72/245 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVI-FHQLDVAD 67
           A++T A +GIG  +    A  G   + T  +E       EKLK       I    LDV D
Sbjct: 5   ALITAAAQGIGRAIALAFAREGANVIATDINE-------EKLKELERGPGITTRVLDVTD 57

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              + ++A       G++D+L N A             GF+  G     +    +  +  
Sbjct: 58  KEQVAALA----KEEGRIDVLFNCA-------------GFVHHG---SILDCEDDDWDFA 97

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  N      M +A++P +       I+N+SS    +        KGV            
Sbjct: 98  MNLNVRSMYLMIKAVLPKMLARKDGSIINMSSVASSI--------KGV------------ 137

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                                  N   Y  +KAA+   T+ +A  +    I  N +CPG 
Sbjct: 138 ----------------------PNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPGT 175

Query: 246 VKTEM 250
           V T  
Sbjct: 176 VDTPS 180

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 34/150 (22%), Positives = 55/150 (36%), Gaps = 17/150 (11%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           VV+G   G+G  +  + A  G   VL AR  +  L+ V           +    D+ D  
Sbjct: 9   VVSGVGPGLGRTLAVRAARAGADVVLAARTAER-LDEVAAEIDDLGRRALAVPTDITDED 67

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
              ++       FG++D LVNNA                     +      +      ++
Sbjct: 68  QCANLVALALERFGRVDALVNNA---------------FRVPSMKPLADADFAHWRAVIE 112

Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
            N LG  R+ +A  P L  S  + IV ++S
Sbjct: 113 LNVLGTLRLTQAFTPALAESGGS-IVMINS 141

Length = 258

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 2e-06
 Identities = 48/246 (19%), Positives = 81/246 (32%), Gaps = 75/246 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTGA KGIG  +  +LA  G   +  AR                         D+A
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGE------------LFACDLA 51

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D     +    I      +D +VNN GI         L   + + +    +   Y+    
Sbjct: 52  DIEQTAATLAQINEIHP-VDAIVNNVGI--------ALPQPLGK-IDLAALQDVYD---- 97

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N   A ++ +A +  ++L +  RIVN+ S                           
Sbjct: 98  ---LNVRAAVQVTQAFLEGMKLREQGRIVNICSR------AIF----------------- 131

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF--CINCVCPG 244
                         G+ +         +Y  +K+A+   TR  A +   +   +N V PG
Sbjct: 132 --------------GALDR-------TSYSAAKSALVGCTRTWALELAEYGITVNAVAPG 170

Query: 245 YVKTEM 250
            ++TE+
Sbjct: 171 PIETEL 176

Length = 234

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 24/173 (13%)

Query: 10  VVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           ++TGA++GIG       A  G  + +  ARD     E  + ++ +G    +    DVA+ 
Sbjct: 6   LITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVV-AGDVANE 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A + ++ D ++S FG+LD LVNNAGI   S     +        AR +         +  
Sbjct: 65  ADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMD------AARLR---------RMF 109

Query: 129 QTNYLGAKRMCEALIPLLQLSDSAR---IVNVSSSLGKL----MYVTHEWAKG 174
            TN LGA          L      R   IVNVSS   +L     YV +  +KG
Sbjct: 110 DTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKG 162

Length = 248

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 60/252 (23%), Positives = 90/252 (35%), Gaps = 71/252 (28%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     +  +V G ++GIG  +VR+   +G     T     G  +A E+L        + 
Sbjct: 1   MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTY---AGSKDAAERLAQETGATAV- 56

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q D AD  A   V D +R   G LDILV NAGI  +  DA  L     + + +  +   
Sbjct: 57  -QTDSADRDA---VIDVVRK-SGALDILVVNAGI-AVFGDALELDADDIDRLFKINIHAP 110

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           Y ++ +        A++M           +  RI+ + S  G  M V             
Sbjct: 111 YHASVE-------AARQM----------PEGGRIIIIGSVNGDRMPV------------- 140

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI 238
                                        A  AAY  SK+A+    R LA+ +      I
Sbjct: 141 -----------------------------AGMAAYAASKSALQGMARGLARDFGPRGITI 171

Query: 239 NCVCPGYVKTEM 250
           N V PG + T+ 
Sbjct: 172 NVVQPGPIDTDA 183

Length = 237

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 53/243 (21%), Positives = 80/243 (32%), Gaps = 62/243 (25%)

Query: 8   YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            A++TG + GIG  V    A  G    +   DE       ++         +    DV+D
Sbjct: 48  VALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD 107

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
            A      +      G+LDILVNNA         + +               T E  +K 
Sbjct: 108 EAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDI---------------TAEQLDKT 152

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
            +TN      M +A +P L+   +  I+N  S                            
Sbjct: 153 FKTNIYSYFHMTKAALPHLKQGSA--IINTGS---------------------------- 182

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                  +  Y EG+            Y  +K A++A+TR LA+      I  N V PG 
Sbjct: 183 -------ITGY-EGNETL-------IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGP 227

Query: 246 VKT 248
           + T
Sbjct: 228 IWT 230

Length = 290

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 7e-06
 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 26/156 (16%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A + A+VTGA KGIG   V+ LA  G   V  +R +      V +        +    +D
Sbjct: 6   AGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPG-----IEPVCVD 60

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE-S 123
           ++D  A     +      G +D+LVNNA +         L  F+E  V +    ++++ +
Sbjct: 61  LSDWDAT----EEALGSVGPVDLLVNNAAVA-------ILQPFLE--VTKEAFDRSFDVN 107

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
               +  + + A+ M    +P         IVNVSS
Sbjct: 108 VRAVIHVSQIVARGMIARGVP-------GSIVNVSS 136

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 45.8 bits (109), Expect = 8e-06
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 16/101 (15%)

Query: 6   KRYAVVTGANK--GIGYEVVRQLALNGIITVLT------------ARDEKGGLEAVEKLK 51
           K+ A+VTGA++  GIG  V R+LA  GI    T              D++  L   E   
Sbjct: 5   KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIES 64

Query: 52  HSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNA 92
           +         ++D++ P A + V   +    G   IL+NNA
Sbjct: 65  YG--VRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNA 103

Length = 256

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 45.8 bits (108), Expect = 9e-06
 Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 77/262 (29%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVI 59
           M     + A+VTGA++GIG  +  +LA +G ++ +   R+++   E + +++ +G    +
Sbjct: 1   MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFL 60

Query: 60  FHQLDVADPAAIHSVADF---------IRSHFGKLDILVNNAGITGISSDADTLSGFIEE 110
                 AD  +I  V            IR    ++DILVNNAGI           G IE 
Sbjct: 61  IE----ADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI--------GTQGTIE- 107

Query: 111 GVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHE 170
                    T E  ++ +  N      + +  +PLL+     R++N+SS+  +L +    
Sbjct: 108 -------NTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGF---- 154

Query: 171 WAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA 230
                                                    + AY LSK A+N  T  LA
Sbjct: 155 ---------------------------------------TGSIAYGLSKGALNTMTLPLA 175

Query: 231 KKYPN--FCINCVCPGYVKTEM 250
           K        +N + PGY KT++
Sbjct: 176 KHLGERGITVNTIMPGYTKTDI 197

Length = 254

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 10  VVTGANKGIGYEVVRQLALNGIIT-VLTAR-----DEKGGLEAVEKLKHSGFDNVIFHQL 63
           +VTG   GIG  + R LA       VL  R     +E+   + +  L+  G   V++   
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGAR-VLYISA 267

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGIT 95
           DV D AA+  + + +R  +G +D +++ AG+ 
Sbjct: 268 DVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL 299

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 1/90 (1%)

Query: 6  KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           + AVV G  + +G  +   LA  G  + V     EK    A E     G         D
Sbjct: 2  NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAGI 94
               ++ +++  +   FG++D+LV NAGI
Sbjct: 62 ATSEQSVLALSRGVDEIFGRVDLLVYNAGI 91

Length = 259

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 45.1 bits (106), Expect = 1e-05
 Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 77/256 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  + ++LA +G ++ +     ++   E V +++ +G           
Sbjct: 5   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG---- 60

Query: 66  ADPAAIHSVADFI---------RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
           A+  ++H V             R+   K DIL+NNAGI            FIEE      
Sbjct: 61  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP--------GAFIEE------ 106

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
              T +  ++ +  N      + +  +   +L D++RI+N+SS+  ++            
Sbjct: 107 --TTEQFFDRMVSVNAKAPFFIIQQALS--RLRDNSRIINISSAATRIS----------- 151

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P 234
                             L D+               AY ++K A+N  T  LAK+    
Sbjct: 152 ------------------LPDF--------------IAYSMTKGAINTMTFTLAKQLGAR 179

Query: 235 NFCINCVCPGYVKTEM 250
              +N + PG++KT+M
Sbjct: 180 GITVNAILPGFIKTDM 195

Length = 252

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 45.2 bits (107), Expect = 1e-05
 Identities = 42/162 (25%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT--ARDEKGGLEAVEKLKHSGFDNV 58
                 R A++TGA+ GIG       A  G    L     +E+   E V+ ++  G   V
Sbjct: 50  FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAV 109

Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
                D+ D A    + +      G LDILVN AG                +  A   + 
Sbjct: 110 ALPG-DLKDEAFCRQLVERAVKELGGLDILVNIAG----------------KQTAVKDIA 152

Query: 119 Q-TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
             T E  +   +TN      +C+A IP L     A I+N  S
Sbjct: 153 DITTEQFDATFKTNVYAMFWLCKAAIPHLP--PGASIINTGS 192

Length = 300

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 9/107 (8%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TG   GIG  +V +    G    +  R      E +  L+    D+V+  + DV   
Sbjct: 9   ALITGGGSGIGRALVERFLAEGARVAVLERSA----EKLASLRQRFGDHVLVVEGDVTSY 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGI----TGISS-DADTLSGFIEE 110
           A      D     FGKLD  V NAGI    T +    A+TL    +E
Sbjct: 65  ADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDE 111

Length = 263

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 2/86 (2%)

Query: 9  AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF-HQLDVAD 67
          A V GA  G+G  + R+ A  G    L AR E   LEA+                 D  D
Sbjct: 2  AAVVGAGDGLGAAIARRFAAEGFSVALAARRE-AKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 68 PAAIHSVADFIRSHFGKLDILVNNAG 93
             + ++ D I    G L++LV NAG
Sbjct: 61 EDEVIALFDLIEEEIGPLEVLVYNAG 86

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)

Query: 4  TAKRYAVVTG--ANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVIF 60
            KR  ++ G   N+ I + + + LA  G     T + E+  LE  VE+L      + + 
Sbjct: 5  EGKR-ILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER--LEKRVEELA-EELGSDLV 60

Query: 61 HQLDVADPAAIHSVADFIRSHFGKLDILV 89
             DV +  +I ++   I+  +GKLD LV
Sbjct: 61 LPCDVTNDESIDALFATIKKKWGKLDGLV 89

Length = 259

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 12/106 (11%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTAR----DEKGGLE-----AVEKLKHSGFDN 57
           +   +TGA++GIG  +  + A +G   V+ A+      K  L      A E+++ +G   
Sbjct: 7   KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPK--LPGTIHTAAEEIEAAGGQA 64

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT 103
           +     DV D   + +        FG +DI VNNA    ++   DT
Sbjct: 65  LPL-VGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDT 109

Length = 273

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 43.2 bits (103), Expect = 4e-05
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 10 VVTGANKGIGYEVVRQLALNGIIT-VLTAR---DEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          ++TG   G+G  + R LA  G    VL +R   D  G    + +L+ +G   V     DV
Sbjct: 4  LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAG-ARVTVVACDV 62

Query: 66 ADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          AD  A+ +V   I +  G L  +++ AG+
Sbjct: 63 ADRDALAAVLAAIPAVEGPLTGVIHAAGV 91

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 44.0 bits (104), Expect = 4e-05
 Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 8/105 (7%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK-HSGFDNVIFHQL 63
             R  +VTG   GIG  V   L   G   ++  R+      A E+++   G   V +   
Sbjct: 6   QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPA 65

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAG-------ITGISSDA 101
           DV D   +    D   +  G+L  +V+ AG       IT I SDA
Sbjct: 66  DVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDA 110

Length = 276

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 1/93 (1%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TGA+ GIG  V       G    + AR     LE +     +    V+    DV+
Sbjct: 10  KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA-LEKLADEIGTSGGKVVPVCCDVS 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISS 99
               + S+ D + +  G +DI V NAGI  ++ 
Sbjct: 69  QHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP 101

Length = 253

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 58/260 (22%), Positives = 99/260 (38%), Gaps = 58/260 (22%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TG++ G+G    R L   G   VL AR +K      +         +I    D++  A 
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQK-RAADAKAACPGAAGVLIG---DLSSLAE 67

Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQT 130
              +AD + +  G+ D +++NAGI         LSG                     +  
Sbjct: 68  TRKLADQVNA-IGRFDAVIHNAGI---------LSG--------PNRKTPDTGIPAMVAV 109

Query: 131 NYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEV 190
           N L A  +  ALI   +     R++ +SS +       H   +G            +D++
Sbjct: 110 NVL-APYVLTALIRRPK-----RLIYLSSGM-------H---RGG--------NASLDDI 145

Query: 191 LSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEM 250
                 D+       +G    + AY  SK  +      +A+++ +   N V PG+V T+M
Sbjct: 146 ------DWFN-----RGEND-SPAYSDSKLHVLTLAAAVARRWKDVSSNAVHPGWVPTKM 193

Query: 251 TYNAGRLTVEEGAESPVWLA 270
                   +E+G  + VWLA
Sbjct: 194 GGAGAPDDLEQGHLTQVWLA 213

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.6 bits (103), Expect = 6e-05
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 9/93 (9%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDV 65
           + AVVTGA  G+G      LA  G   V+           V ++++ +G    +    D+
Sbjct: 13  KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-AKAVAVAGDI 71

Query: 66  ADPAAIHSVAD-FIRS--HFGKLDILVNNAGIT 95
           +      + AD  + +    G LDI+VNNAGIT
Sbjct: 72  SQ----RATADELVATAVGLGGLDIVVNNAGIT 100

Length = 306

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 11/108 (10%)

Query: 9   AVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A++TG   G+G  +V +    G  + VL    EK     V +L+    D V+  + DV  
Sbjct: 7   ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEK-----VAELRADFGDAVVGVEGDVRS 61

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSD-----ADTLSGFIEE 110
            A            FGKLD  + NAGI   S+       + L    +E
Sbjct: 62  LADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDE 109

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 43.4 bits (102), Expect = 7e-05
 Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
          M     R AV+TG   GIG     + A  G   VL   D+ G  +AV  L+  GFD    
Sbjct: 1  MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFD---V 57

Query: 61 HQL--DVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          H +  DV     +  +AD      G +D++ +NAGI
Sbjct: 58 HGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGI 93

Length = 275

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 31/158 (19%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG ++G+G  +  QL   GI  +  AR     L A      +G + +   +LD++D 
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAA-----AAG-ERLAEVELDLSDA 57

Query: 69  AAIHSVADFIRSHFG-------KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
           AA    A ++               +L+NNAG         TL       +AR       
Sbjct: 58  AA---AAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDA---AAIARA------ 105

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
                 +  N      +  AL      +   RI+++SS
Sbjct: 106 ------VGLNVAAPLMLTAALAQAASDAAERRILHISS 137

Length = 243

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 9  AVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           ++TG   ++ I + + + L   G     T + E      VEKL     ++ +    DV+
Sbjct: 4  ILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKR-VEKLAERLGESALVLPCDVS 62

Query: 67 DPAAIHSVADFIRSHFGKLDILV 89
          +   I  +   ++  +GKLD LV
Sbjct: 63 NDEEIKELFAEVKKDWGKLDGLV 85

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 10 VVTGANKGIGYEVVRQLALNGIIT-VLTARDEKGGLEA---VEKLKHSGFDNVIFHQLDV 65
          +VTG   G+G E+ R LA  G    VL +R      EA   + +L+  G   V     DV
Sbjct: 4  LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGA-EVTVVACDV 62

Query: 66 ADPAAIHSVADFIRSHFGKLDILVNNAGIT 95
          +D  A+ ++   IR+    L  +++ AG+ 
Sbjct: 63 SDRDAVRALLAEIRADGPPLRGVIHAAGVL 92

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 1/95 (1%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A + A+VTG   GIG      LA  G   ++T  D++ G   VE++ + G    +F   D
Sbjct: 15  AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG-GEALFVSYD 73

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISS 99
           +        V     + F ++D+L  NAG+  I S
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNAGLYKIDS 108

Length = 169

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 54/238 (22%), Positives = 88/238 (36%), Gaps = 68/238 (28%)

Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           ++TGA + IG  +   L   G   +++ R       A++ L+ +G       Q D +  A
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQAG---AQCIQADFSTNA 59

Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSD--ADTLSGFIEEGVARGKMTQTYESAEKC 127
            I +  D ++ H   L  +++NA      SD  A+     + + +AR  M Q + +A   
Sbjct: 60  GIMAFIDELKQHTDGLRAIIHNA------SDWLAEKPGAPLADVLAR--MMQIHVNAP-- 109

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
               YL    +  AL  LL+    A                        SD  ++T    
Sbjct: 110 ----YL----LNLALEDLLRGHGHAA-----------------------SDIIHIT---- 134

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPG 244
           D V+ +       GS           AY  SKAA++  T   A K  P   +N + P 
Sbjct: 135 DYVVEK-------GSD-------KHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPA 178

Length = 236

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 17/157 (10%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG   GIG    R+ A  G    +   + +   +    ++  G +   F   D+ 
Sbjct: 4   KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAF-ACDIT 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  ++ +         G +D+LVNNAG         T     E  +A             
Sbjct: 63  DRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIA------------- 109

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
               N  GA  M  A++P +    + RIVN++S   +
Sbjct: 110 ---INLTGALHMHHAVLPGMVERGAGRIVNIASDAAR 143

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 61/293 (20%), Positives = 97/293 (33%), Gaps = 82/293 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNG--IITV-------------LTARDEKGGLEAVEKLK 51
           + A +TGA +G G     +LA  G  II +             L  R++   L+   +L 
Sbjct: 4   KVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATRED---LDETARLV 60

Query: 52  HSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEG 111
            +    V+  + DV D A + +V +     FG+LD++V NAG+           G   E 
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSY--------GRSWE- 111

Query: 112 VARGKMTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHE 170
                   + E  +  L  N  G  R C+A++P +++  +   I+  SS  G        
Sbjct: 112 -------LSEEQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAG-------- 156

Query: 171 WAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA 230
                                              K  P   A Y  +K  +   T+ LA
Sbjct: 157 ----------------------------------LKALPGL-AHYAAAKHGLVGLTKTLA 181

Query: 231 KKYPNFCI--NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLF 281
            +   + I  N + P  V T M         E   + P          P   F
Sbjct: 182 NELAEYGIRVNSIHPYSVDTPMIAPE--AMREAFLKYPEAARAFMPALPVSGF 232

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 18/107 (16%)

Query: 1   MAETAKRYAVVTGAN--KGIGYEVVRQLALNG---IITVLTARDEK--GGLEA------V 47
           M +   + AVVTG +   GIG  + ++LA  G     T  TA D++   G++        
Sbjct: 1   MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQ 60

Query: 48  EKLKHSGFDNVIFH--QLDVADPAAIHSVADFIRSHFGKLDILVNNA 92
           E+L  +G   V     +LD+    A   + + +    G   ILVNNA
Sbjct: 61  EELLKNG---VKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNA 104

Length = 256

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 10/97 (10%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVL---------TARDEKGGLEAVEKLKHSGFDN 57
           R  +VTGA  GIG       A  G   V+         +A         V+++  +G + 
Sbjct: 7   RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEA 66

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
           V  +  D+AD     ++ D     FG LD+LVNNAGI
Sbjct: 67  VA-NGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI 102

Length = 286

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 17/98 (17%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-------------LEAVEKLKHS 53
           + A+V GA +G G  +  +L   G    +T R  +                E V      
Sbjct: 9   KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGR 68

Query: 54  GFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNN 91
           G    I  Q+D   P  + ++ + I    G+LDILVN+
Sbjct: 69  G----IAVQVDHLVPEQVRALVERIDREQGRLDILVND 102

Length = 305

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 40.5 bits (95), Expect = 5e-04
 Identities = 51/163 (31%), Positives = 65/163 (39%), Gaps = 36/163 (22%)

Query: 1   MAETAKRYAVVTGA--NKGIGYEVVRQLALNGI---ITVLTARDEKGGLEA-----VEKL 50
           M +   + A+VTG   N+ I + + +QL   G    IT L   DEKG  E       E L
Sbjct: 1   MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLP--DEKGRFEKKVRELTEPL 58

Query: 51  KHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNN---AGITGISSDADTLSGF 107
             S     +F   DV D A I    + I+  +GKLDILV+    AG   +  D    S  
Sbjct: 59  NPS-----LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGD---FSAT 110

Query: 108 IEEGVARGKMTQTYE-----SAEKCLQTN--------YLGAKR 137
             EG AR      Y       A K L +         YLG  R
Sbjct: 111 SREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR 153

Length = 258

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 40.0 bits (94), Expect = 6e-04
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 10 VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
          VV GA  GIG  + R++   G   +L   +E+    A + L+ +GFD V   ++DV+   
Sbjct: 6  VVIGAG-GIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFD-VSTQEVDVSSRE 62

Query: 70 AIHSVADFIRSHFGKLDILVNNAGIT 95
          ++ ++A   ++  G +  LV+ AG++
Sbjct: 63 SVKALAATAQT-LGPVTGLVHTAGVS 87

Length = 275

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 39.7 bits (93), Expect = 8e-04
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 36/164 (21%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDE------KGGL----EAVEKLKHSGFDNVIF 60
           +TGA++GIG  +  + A +G   V+ A+         G +    E +E         ++ 
Sbjct: 8   ITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCIV- 66

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIE--EGV-ARGKM 117
              D+ D   + +  +     FG +DILVNNA    ++   DT     +   GV  RG  
Sbjct: 67  ---DIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRG-- 121

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL 161
             TY  ++ C               +P L+ S +  I+N+S  L
Sbjct: 122 --TYLCSKAC---------------LPYLKKSKNPHILNLSPPL 148

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 9  AVVTGANKGIGYEVVRQLALNGIITVL----TARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           ++ G  K +G  + R LA  G   V     +A  +    E V  +K +G   V F Q D
Sbjct: 11 VLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF-QAD 69

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAG 93
          +   AA+  + D  ++ FG+ DI +N  G
Sbjct: 70 LTTAAAVEKLFDDAKAAFGRPDIAINTVG 98

Length = 257

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 16/113 (14%)

Query: 8   YAVVTGANKGIGYEVVRQLALN----GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
             +VTGA++G G  + ++LA      G + VL+AR+++   +   ++        +    
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRV--VR 59

Query: 64  DVADPAAIHSVADFIRS--------HFGKLDILVNNAGITG-ISSDADTLSGF 107
              D  A   +   +++           +L +L+NNAG  G +S     LS  
Sbjct: 60  VSLDLGAEAGLEQLLKALRELPRPKGLQRL-LLINNAGTLGDVSKGFVDLSDS 111

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 46/202 (22%), Positives = 76/202 (37%), Gaps = 23/202 (11%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +T A   +G  +    A  G   +L  +D+   L+   +   +  DNV   QL      +
Sbjct: 10  ITSAGSVLGRTISCHFARLGATLILCDQDQSA-LKDTYEQCSALTDNVYSFQLKDFSQES 68

Query: 71  IHSVADFIRSHFGK-LDILVNNAGITGISS--DADTLSGFIEE--GVARGKMTQTYESAE 125
           I  + D I   F +  D+LVNN   + + S  D      FI++   +A    T    +AE
Sbjct: 69  IRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAE 128

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAK----------GV 175
           +  + N  G       ++ ++   D   +  V SS   +   TH WAK          GV
Sbjct: 129 RMRKRNKKG------VIVNVISHDDHQDLTGVESSNALVSGFTHSWAKELTPFNIRVGGV 182

Query: 176 FSDAENLTEERVDEVLSQYLND 197
                +     +D V    + D
Sbjct: 183 VPSIFS-ANGELDAVHWAEIQD 203

Length = 227

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 39/153 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            +VTG    IG  +VR+L   G  + VL  R            +      + FH+ D+ D
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRS---------ESLNTGRIRFHEGDLTD 51

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           P A+      +     + D +++ A  +G+                      ++E     
Sbjct: 52  PDAL---ERLLAEV--QPDAVIHLAAQSGVG--------------------ASFEDPADF 86

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 160
           ++ N LG  R+ EA     + +   R V  SSS
Sbjct: 87  IRANVLGTLRLLEA----ARRAGVKRFVFASSS 115

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLD 64
          + AVVTG + G+G  +   LA  G   V     E    E +E++   G  F ++     D
Sbjct: 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTALGRRFLSL---TAD 65

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          +     I ++ +   + FG +DILVNNAG+
Sbjct: 66 LRKIDGIPALLERAVAEFGHIDILVNNAGL 95

Length = 253

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 32/164 (19%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNV 58
           M++ AK   ++TGA+ G+G    + LA  G   ++  R+ K    A ++L   G   D+ 
Sbjct: 1   MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL---GIPPDSY 57

Query: 59  IFHQLDVADPAAIHS-VADFIRSHFGK-LDILVNNAGITGISSDADTLSGFIEEGVARGK 116
               +D+ D  ++   V DF     GK LD LV NA                   V    
Sbjct: 58  TIIHIDLGDLDSVRRFVDDFRA--LGKPLDALVCNA------------------AVYMPL 97

Query: 117 MTQTYESA---EKCLQTNYLGAKRMCEALIPLLQLSDSA--RIV 155
           + +   S    E  + TN+LG   +C  L+  L+ S +   R+V
Sbjct: 98  LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLV 141

Length = 322

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 19/155 (12%)

Query: 10  VVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           +VTGA++GIG  +  +LA +G  I V            V  ++  G  N    Q DVAD 
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG-GNARLLQFDVADR 60

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A  ++ +   +  G    +V NAGIT    DA           A   +++  E  +  +
Sbjct: 61  VACRTLLEADIAEHGAYYGVVLNAGIT---RDA-----------AFPALSE--EDWDIVI 104

Query: 129 QTNYLGAKRMCEALI-PLLQLSDSARIVNVSSSLG 162
            TN  G   +      P+++     RI+ ++S  G
Sbjct: 105 HTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSG 139

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 36/167 (21%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVI 59
           M+  A R A+VTGA + IG  +   LA +G    +     +   EA   +++  G   V 
Sbjct: 4   MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVA 63

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             Q D+AD A + ++     +  G + +LVNNA +     + D+ + F            
Sbjct: 64  L-QADLADEAEVRALVARASAALGPITLLVNNASLF----EYDSAASF------------ 106

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLL-------QLSDSAR--IVNV 157
           T  S ++ + TN L A        P +        L   AR  +VN+
Sbjct: 107 TRASWDRHMATN-LRA--------PFVLAQAFARALPADARGLVVNM 144

Length = 258

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLT----ARDEKGGLEA-----VEKLKHSGFDN 57
          R  +VTGA  G+G       A  G   V+      R   G   +     V+++K +G   
Sbjct: 6  RVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAG-GK 64

Query: 58 VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
           + +   V D   I  V   I   FG++DILVNNAGI
Sbjct: 65 AVANYDSVEDGEKI--VKTAI-DAFGRVDILVNNAGI 98

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 22/86 (25%)

Query: 11 VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
          +TGA   +G  +VR L   G   + T R                       +LD+ DP A
Sbjct: 4  ITGATGMLGRALVRLLKERGYEVIGTGRSRAS-----------------LFKLDLTDPDA 46

Query: 71 IHSVADFIRSHFGKLDILVNNAGITG 96
             V + IR +  K D+++N A  T 
Sbjct: 47 ---VEEAIRDY--KPDVIINCAAYTR 67

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 0.003
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 1/88 (1%)

Query: 5  AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
          A +  VV G   GI   + +  A  G    + +R ++    AV +L+ +G    +    D
Sbjct: 8  AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGP-EGLGVSAD 66

Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNA 92
          V D AA+ +    I   FG +D+LV+ A
Sbjct: 67 VRDYAAVEAAFAQIADEFGPIDVLVSGA 94

Length = 264

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 37.9 bits (88), Expect = 0.003
 Identities = 60/248 (24%), Positives = 94/248 (37%), Gaps = 65/248 (26%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQ 62
           A + A+VT +  GIG  + R+LA +G   V+++R ++    AV  L+  G      + H 
Sbjct: 9   ANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHV 68

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
               D   +  VA  +  H G +DILV+NA +       +   G I        +  T E
Sbjct: 69  GKAEDRERL--VATAVNLH-GGVDILVSNAAV-------NPFFGNI--------LDSTEE 110

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             +K L  N      M +A++P ++      +V VSS                F     L
Sbjct: 111 VWDKILDVNVKATALMTKAVVPEMEKRGGGSVVIVSSV-------------AAFHPFPGL 157

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINC 240
                               P           Y +SK A+   T+ LA +    N  +NC
Sbjct: 158 -------------------GP-----------YNVSKTALLGLTKNLAPELAPRNIRVNC 187

Query: 241 VCPGYVKT 248
           + PG +KT
Sbjct: 188 LAPGLIKT 195

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 10  VVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           ++TG   G+G  V R LA  G   + +L+ R       A   L  +G   V   + DV D
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARVSVVRCDVTD 213

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGI 94
           PAA+ ++   + +  G L  +++ AG+
Sbjct: 214 PAALAALLAELAA-GGPLAGVIHAAGV 239

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 2/87 (2%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          +   + G ++G+GY V       G    + +R+E       + L   G  N+ +   DV+
Sbjct: 6  KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG--NIHYVVGDVS 63

Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAG 93
             +  +V +        +D LV   G
Sbjct: 64 STESARNVIEKAAKVLNAIDGLVVTVG 90

Length = 238

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 5  AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV 47
          + +  +VTGA++G+G +V +  A  G   +L AR +K  LE V
Sbjct: 5  SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQK-KLEKV 46

Length = 239

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	290
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	99.98
PRK07074	257	short chain dehydrogenase; Provisional	99.98
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.98
PRK06924	251	short chain dehydrogenase; Provisional	99.98
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK07577	234	short chain dehydrogenase; Provisional	99.98
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK09135	249	pteridine reductase; Provisional	99.98
PRK07060	245	short chain dehydrogenase; Provisional	99.98
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.98
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.97
PRK12829	264	short chain dehydrogenase; Provisional	99.97
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
COG1028	251	FabG Dehydrogenases with different specificities (	99.97
PRK06101	240	short chain dehydrogenase; Provisional	99.97
PRK06181	263	short chain dehydrogenase; Provisional	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK07023	243	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.96
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.96
PRK09291	257	short chain dehydrogenase; Provisional	99.96
PRK12367	245	short chain dehydrogenase; Provisional	99.96
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK08017	256	oxidoreductase; Provisional	99.95
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.95
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.95
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.93
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
PLN03209	576	translocon at the inner envelope of chloroplast su	99.87
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.86
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.85
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.84
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.84
PLN02583	297	cinnamoyl-CoA reductase	99.84
PLN02650	351	dihydroflavonol-4-reductase	99.83
PLN02214	342	cinnamoyl-CoA reductase	99.83
PRK06720	169	hypothetical protein; Provisional	99.82
PLN00198	338	anthocyanidin reductase; Provisional	99.81
PLN02653	340	GDP-mannose 4,6-dehydratase	99.8
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.8
PLN02572	442	UDP-sulfoquinovose synthase	99.8
PLN02240	352	UDP-glucose 4-epimerase	99.8
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.79
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.78
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.78
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.77
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.77
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.77
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.76
PLN02686	367	cinnamoyl-CoA reductase	99.75
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.75
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.74
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.73
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.72
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.71
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.71
PLN02427	386	UDP-apiose/xylose synthase	99.69
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.69
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.69
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.68
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.68
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.66
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.65
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.63
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.62
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.62
PLN02260	668	probable rhamnose biosynthetic enzyme	99.61
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.6
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.59
CHL00194	317	ycf39 Ycf39; Provisional	99.58
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.57
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.57
PLN02206	442	UDP-glucuronate decarboxylase	99.55
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.55
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.55
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.51
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.5
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.47
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.47
PRK07201	657	short chain dehydrogenase; Provisional	99.46
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.44
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.43
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.42
PLN02996	491	fatty acyl-CoA reductase	99.42
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.37
PLN02778	298	3,5-epimerase/4-reductase	99.34
PRK05865	854	hypothetical protein; Provisional	99.32
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.29
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.26
PLN02503	605	fatty acyl-CoA reductase 2	99.24
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.24
PLN02260	668	probable rhamnose biosynthetic enzyme	99.18
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.18
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.17
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.17
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.12
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.11
PRK08309	177	short chain dehydrogenase; Provisional	99.1
PLN00016	378	RNA-binding protein; Provisional	99.08
PRK12320	699	hypothetical protein; Provisional	98.96
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.93
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.9
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.88
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.85
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.82
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.77
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.74
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.7
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.69
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.64
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.55
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.51
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.39
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.27
PRK09620	229	hypothetical protein; Provisional	98.22
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.2
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.18
PLN00106	323	malate dehydrogenase	98.17
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.17
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.16
KOG2774	366	consensus NAD dependent epimerase [General functio	98.16
COG2910	211	Putative NADH-flavin reductase [General function p	98.11
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.09
PTZ00325	321	malate dehydrogenase; Provisional	98.06
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.05
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.04
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.02
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.92
PRK14982	340	acyl-ACP reductase; Provisional	97.9
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.82
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.67
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.63
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.59
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.57
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.48
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.46
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.46
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.44
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.42
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.34
PRK06849	389	hypothetical protein; Provisional	97.32
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.31
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.3
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.3
PRK05086	312	malate dehydrogenase; Provisional	97.25
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.24
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.21
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.2
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.19
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.16
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.15
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.07
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.05
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.04
PRK14968	188	putative methyltransferase; Provisional	97.03
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.01
COG3268	382	Uncharacterized conserved protein [Function unknow	97.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.97
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.95
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.94
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.94
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.93
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.92
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.92
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.88
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.87
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.87
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.84
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.81
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.8
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.79
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.78
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.76
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.73
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.64
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.64
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.63
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.6
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.59
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.57
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.57
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.56
PRK09496	453	trkA potassium transporter peripheral membrane com	96.54
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.51
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.5
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.49
PRK04148	134	hypothetical protein; Provisional	96.46
KOG4288	283	consensus Predicted oxidoreductase [General functi	96.45
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.44
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.4
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.39
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.39
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.38
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.38
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.37
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.36
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.33
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.31
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.3
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.3
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.27
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.26
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.24
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.23
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.22
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.2
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.18
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.18
PTZ00117	319	malate dehydrogenase; Provisional	96.12
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.11
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.08
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.06
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.06
PRK08223	287	hypothetical protein; Validated	96.01
PRK05442	326	malate dehydrogenase; Provisional	95.98
PRK09496	453	trkA potassium transporter peripheral membrane com	95.97
PRK08328	231	hypothetical protein; Provisional	95.93
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.92
PLN02928	347	oxidoreductase family protein	95.9
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.85
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.85
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.84
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	95.82
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.82
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	95.81
PLN00203	519	glutamyl-tRNA reductase	95.8
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.8
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.74
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	95.72
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.71
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.66
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.59
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.59
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.59
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.59
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.56
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.55
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.52
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.5
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.49
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.46
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.46
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.45
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	95.43
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	95.39
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.37
PRK08655	437	prephenate dehydrogenase; Provisional	95.36
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.36
PRK14851	679	hypothetical protein; Provisional	95.35
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.34
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.32
PLN02740	381	Alcohol dehydrogenase-like	95.31
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.31
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.29
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.26
PLN02602	350	lactate dehydrogenase	95.26
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.24
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.23
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.22
PTZ00354	334	alcohol dehydrogenase; Provisional	95.22
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.17
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	95.14
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.13
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.12
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.12
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.1
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.09
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.08
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.07
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.07
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.04
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.02
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.01
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.97
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	94.97
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.96
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	94.96
PRK07877	722	hypothetical protein; Provisional	94.95
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.84
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.83
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.83
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.83
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.82
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	94.81
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	94.8
PRK14852	989	hypothetical protein; Provisional	94.78
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	94.78
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.77
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.77
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.77
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.73
PRK07411	390	hypothetical protein; Validated	94.73
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.71
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.69
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.64
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.63
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	94.6
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.6
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	94.58
PLN02827	378	Alcohol dehydrogenase-like	94.56
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.55
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	94.5
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.49
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	94.48
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.41
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.38
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.38
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.35
PLN02306	386	hydroxypyruvate reductase	94.29

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=4.3e-43  Score=294.66  Aligned_cols=214  Identities=29%  Similarity=0.382  Sum_probs=197.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..+++|+++|||||+|||.++|++|+++|++|++++|+.+++++..+++.+   ..+.++..|++|.++++++++.+.+
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---~~~~~~~~DVtD~~~~~~~i~~~~~   77 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---GAALALALDVTDRAAVEAAIEALPE   77 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---CceEEEeeccCCHHHHHHHHHHHHH
Confidence            7889999999999999999999999999999999999999999999988865   4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +|+++|+||||||.+...+..+.                +.++|++++++|+.|.++.+++++|.|.++.+|+|||+||+
T Consensus        78 ~~g~iDiLvNNAGl~~g~~~~~~----------------~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~Si  141 (246)
T COG4221          78 EFGRIDILVNNAGLALGDPLDEA----------------DLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSI  141 (246)
T ss_pred             hhCcccEEEecCCCCcCChhhhC----------------CHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccc
Confidence            99999999999999876554443                99999999999999999999999999999999999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      +|..++                                           ++...|+++|+++.+|+..|..|+  .+|||
T Consensus       142 AG~~~y-------------------------------------------~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRV  178 (246)
T COG4221         142 AGRYPY-------------------------------------------PGGAVYGATKAAVRAFSLGLRQELAGTGIRV  178 (246)
T ss_pred             cccccC-------------------------------------------CCCccchhhHHHHHHHHHHHHHHhcCCCeeE
Confidence            999987                                           778999999999999999999999  69999


Q ss_pred             EEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCC
Q 039097          239 NCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGG  276 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~  276 (290)
                      ..|.||.+.|..+...                ..++||++|+.++|.+..|...
T Consensus       179 t~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~v  232 (246)
T COG4221         179 TVISPGLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAATQPQHV  232 (246)
T ss_pred             EEecCceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCcc
Confidence            9999999977654443                2679999999999999998854

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.6e-40  Score=286.48  Aligned_cols=215  Identities=27%  Similarity=0.364  Sum_probs=197.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..+++++++|||||+|||+++|++|+++|++|++++|+.+++++..+++....+..+.++++|+++.+++.++.+++.+
T Consensus         1 ~~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~   80 (265)
T COG0300           1 PGPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKE   80 (265)
T ss_pred             CCCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHh
Confidence            56789999999999999999999999999999999999999999999999988877899999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ....||+||||||+....+..+.                +.++.++++++|+.+.+.|+++++|.|.+++.|+||||+|.
T Consensus        81 ~~~~IdvLVNNAG~g~~g~f~~~----------------~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~  144 (265)
T COG0300          81 RGGPIDVLVNNAGFGTFGPFLEL----------------SLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSA  144 (265)
T ss_pred             cCCcccEEEECCCcCCccchhhC----------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEech
Confidence            98899999999999866655444                99999999999999999999999999999999999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC--CeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~i~v  238 (290)
                      +|..+.                                           |....|++||+++.+|+++|..|++  ||+|
T Consensus       145 ag~~p~-------------------------------------------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V  181 (265)
T COG0300         145 AGLIPT-------------------------------------------PYMAVYSATKAFVLSFSEALREELKGTGVKV  181 (265)
T ss_pred             hhcCCC-------------------------------------------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence            998876                                           6679999999999999999999994  7999


Q ss_pred             EEeecceeecCccc-CC----------CCCChhhhccchhhhhhccC
Q 039097          239 NCVCPGYVKTEMTY-NA----------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       239 n~v~PG~v~T~~~~-~~----------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .+|+||+|.|+++. ..          ..++|+++|+..+..+...+
T Consensus       182 ~~v~PG~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         182 TAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             EEEecCccccccccccccccccccchhhccCHHHHHHHHHHHHhcCC
Confidence            99999999999995 21          24699999999888877644

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-40  Score=290.40  Aligned_cols=226  Identities=22%  Similarity=0.233  Sum_probs=196.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++|+++++++++++. ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh
Confidence            37899999999999999999999999999999999998888887777765544568899999999999999999986 58


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.....+..                +.+.++|++++++|+.+++.++++++|+|++++.|+||++||..+
T Consensus        84 g~iD~lv~nag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~  147 (263)
T PRK08339         84 GEPDIFFFSTGGPKPGYFM----------------EMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI  147 (263)
T ss_pred             CCCcEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence            9999999999976443332                338999999999999999999999999999887899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+|+++|+++++.|+  .|||||+
T Consensus       148 ~~~~-------------------------------------------~~~~~y~asKaal~~l~~~la~el~~~gIrVn~  184 (263)
T PRK08339        148 KEPI-------------------------------------------PNIALSNVVRISMAGLVRTLAKELGPKGITVNG  184 (263)
T ss_pred             cCCC-------------------------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            6543                                           456789999999999999999999  4899999


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|++....                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       185 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~~~~itG~~~~vdgG~  258 (263)
T PRK08339        185 IMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDLGSYINGAMIPVDGGR  258 (263)
T ss_pred             EEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcchhcCccCceEEECCCc
Confidence            99999999974210                          1347999999999999988888999999888754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-40  Score=287.56  Aligned_cols=193  Identities=31%  Similarity=0.451  Sum_probs=174.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCc-EEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDN-VIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~-~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |++++||+|+|||||+|||.++|.+|+++|++++++.|+..+++...+++++..... +++++||++|.++++++++++.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            568999999999999999999999999999999999999999999989988876555 9999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      .+||++|+||||||+........                .+.+++.++|++|++|+..++++++|+|++++.|+||++||
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~----------------~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisS  150 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLED----------------TDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISS  150 (282)
T ss_pred             HhcCCCCEEEecCcccccccccc----------------CcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEec
Confidence            99999999999999976322222                28899999999999999999999999999998899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC----C
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP----N  235 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~----~  235 (290)
                      +.|..+.                                           |....|++||+|+.+|+.+|+.|+.    .
T Consensus       151 iaG~~~~-------------------------------------------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~  187 (282)
T KOG1205|consen  151 IAGKMPL-------------------------------------------PFRSIYSASKHALEGFFETLRQELIPLGTI  187 (282)
T ss_pred             cccccCC-------------------------------------------CcccccchHHHHHHHHHHHHHHHhhccCce
Confidence            9999876                                           5556999999999999999999993    2


Q ss_pred             eEEEEeecceeecCcccC
Q 039097          236 FCINCVCPGYVKTEMTYN  253 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~  253 (290)
                      +++ .|+||+|+|++...
T Consensus       188 i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  188 III-LVSPGPIETEFTGK  204 (282)
T ss_pred             EEE-EEecCceeecccch
Confidence            666 89999999997444

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=3.6e-40  Score=265.44  Aligned_cols=224  Identities=24%  Similarity=0.274  Sum_probs=199.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++.|+++||||++|||++++++|+.+|++|++.+++...++++...+...+  ....+.||+++..+++..+++..+.+
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~--~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG--DHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC--ccceeeeccCcHHHHHHHHHHHHHhc
Confidence            3568999999999999999999999999999999999888888887775443  46778999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc--cCCCCeEEEEcCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ--LSDSARIVNVSSS  160 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~--~~~~~~iV~isS~  160 (290)
                      +.+++||||||+.....+...                ..++|++++.+|+.|.|++++++.+.|.  .+.+.+|||+||+
T Consensus        89 g~psvlVncAGItrD~~Llrm----------------kq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSI  152 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDGLLLRM----------------KQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSI  152 (256)
T ss_pred             CCCcEEEEcCccccccceeec----------------cHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhh
Confidence            999999999999866555443                7899999999999999999999999843  3344599999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .|..+.                                           .++.-|+++|+++.+|+|+.|+|+  ++|||
T Consensus       153 VGkiGN-------------------------------------------~GQtnYAAsK~GvIgftktaArEla~knIrv  189 (256)
T KOG1200|consen  153 VGKIGN-------------------------------------------FGQTNYAASKGGVIGFTKTAARELARKNIRV  189 (256)
T ss_pred             hccccc-------------------------------------------ccchhhhhhcCceeeeeHHHHHHHhhcCceE
Confidence            999876                                           567899999999999999999999  69999


Q ss_pred             EEeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|.||++.|||+...|               .-.+||+|..++||+++...+.+|+-+..+|.
T Consensus       190 N~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG~t~evtGG  253 (256)
T KOG1200|consen  190 NVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITGTTLEVTGG  253 (256)
T ss_pred             eEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccceeEEEecc
Confidence            99999999999999875               24899999999999999999999999887764

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-39  Score=281.39  Aligned_cols=225  Identities=18%  Similarity=0.199  Sum_probs=189.0

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+++|+++||||+  +|||+++|++|+++|++|++++|+. +.++..+++.   ..++.+++||++|.++++++++++.+
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV---DEEDLLVECDVASDESIERAFATIKE   79 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc---cCceeEEeCCCCCHHHHHHHHHHHHH
Confidence            4789999999999  8999999999999999999999983 4444444443   23578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|++|||||+..+.+..            ....+.+.++|++.+++|+.+++.+++.++|+|++  +|+||++||.
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~------------~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~  145 (252)
T PRK06079         80 RVGKIDGIVHAIAYAKKEELG------------GNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYF  145 (252)
T ss_pred             HhCCCCEEEEccccccccccc------------CCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEecc
Confidence            999999999999986432110            11223488999999999999999999999999974  4899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++|+++|+.|+  .+|+|
T Consensus       146 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~v  182 (252)
T PRK06079        146 GSERAI-------------------------------------------PNYNVMGIAKAALESSVRYLARDLGKKGIRV  182 (252)
T ss_pred             CccccC-------------------------------------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            876543                                           456889999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+|+|++....                 ...+|||+|+.++++++......+|+.+..++..
T Consensus       183 n~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg~  249 (252)
T PRK06079        183 NAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTGVTGDIIYVDKGV  249 (252)
T ss_pred             EEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccccccEEEeCCce
Confidence            9999999999975321                 2358999999999999988888999999888764

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-39  Score=285.08  Aligned_cols=227  Identities=19%  Similarity=0.248  Sum_probs=186.8

Q ss_pred             CcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      +.|++|++|||||+  +|||+++|++|+++|++|++++|+.. .++..+++....+.. .++++|++|.++++++++++.
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHH
Confidence            35789999999997  89999999999999999999999853 334444443332333 678999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|+||||||+.......            ..+.+.+.++|++++++|+.+++++++.++|+|++  .|+||++||
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~------------~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS  144 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALE------------GSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSY  144 (274)
T ss_pred             HHcCCCCEEEECCccCcccccc------------cccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEec
Confidence            9999999999999975321000            01123488999999999999999999999999975  489999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           +....|++||+|+.+|+++|+.|+  .+|+
T Consensus       145 ~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIr  181 (274)
T PRK08415        145 LGGVKYV-------------------------------------------PHYNVMGVAKAALESSVRYLAVDLGKKGIR  181 (274)
T ss_pred             CCCccCC-------------------------------------------CcchhhhhHHHHHHHHHHHHHHHhhhcCeE
Confidence            8776543                                           456789999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+|+|++....                 ...+|||+|+.++|++++.....+|+.+..++.
T Consensus       182 Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~itG~~i~vdGG  248 (274)
T PRK08415        182 VNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG  248 (274)
T ss_pred             EEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhcccccEEEEcCc
Confidence            99999999999874310                 134799999999999998878899999888775

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.9e-39  Score=276.97  Aligned_cols=211  Identities=26%  Similarity=0.323  Sum_probs=194.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.+|++||||||++|||+++|++|+++|+++++.|.+....++..++++..+  +++.+.||+++.+++.+.++++++++
T Consensus        35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk~e~  112 (300)
T KOG1201|consen   35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVKKEV  112 (300)
T ss_pred             hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            5679999999999999999999999999999999999999999999998764  79999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |.+|+||||||+....+..+.                +.+++++++++|+.|+|++.++++|.|.++..|+||+|+|.+|
T Consensus       113 G~V~ILVNNAGI~~~~~ll~~----------------~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG  176 (300)
T KOG1201|consen  113 GDVDILVNNAGIVTGKKLLDC----------------SDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAG  176 (300)
T ss_pred             CCceEEEeccccccCCCccCC----------------CHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhc
Confidence            999999999999987776655                9999999999999999999999999999999999999999999


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-----CCeE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-----PNFC  237 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-----~~i~  237 (290)
                      ..+.                                           ++...|++||+|+.+|.++|..|+     .+|+
T Consensus       177 ~~g~-------------------------------------------~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~Ik  213 (300)
T KOG1201|consen  177 LFGP-------------------------------------------AGLADYCASKFAAVGFHESLSMELRALGKDGIK  213 (300)
T ss_pred             ccCC-------------------------------------------ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCee
Confidence            9875                                           778999999999999999999997     3799


Q ss_pred             EEEeecceeecCcccC-------CCCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYN-------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~-------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ...|+|+.++|+|...       +|.++|+++|++++.......
T Consensus       214 tTlv~P~~i~Tgmf~~~~~~~~l~P~L~p~~va~~Iv~ai~~n~  257 (300)
T KOG1201|consen  214 TTLVCPYFINTGMFDGATPFPTLAPLLEPEYVAKRIVEAILTNQ  257 (300)
T ss_pred             EEEEeeeeccccccCCCCCCccccCCCCHHHHHHHHHHHHHcCC
Confidence            9999999999999873       367899999999988766444

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-39  Score=279.03  Aligned_cols=225  Identities=22%  Similarity=0.252  Sum_probs=191.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+..  ++..+++... +.++.++.+|++++++++++++++.+
T Consensus         3 ~~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          3 LFDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             CcccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            34788999999999999999999999999999999988642  2333444332 34688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      .++++|++|||||+....+..+                .+.++|++++++|+.+++.++++++|+|++++ +|+||++||
T Consensus        80 ~~g~iD~lv~~ag~~~~~~~~~----------------~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS  143 (251)
T PRK12481         80 VMGHIDILINNAGIIRRQDLLE----------------FGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIAS  143 (251)
T ss_pred             HcCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCC
Confidence            9999999999999865443322                38899999999999999999999999997654 589999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .||+
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gir  180 (251)
T PRK12481        144 MLSFQGG-------------------------------------------IRVPSYTASKSAVMGLTRALATELSQYNIN  180 (251)
T ss_pred             hhhcCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            9876643                                           445789999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||++.|++....                 ...+|||+|+.+.+++++.....+|+.+..++.
T Consensus       181 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~~i~vdgg  247 (251)
T PRK12481        181 VNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAVDGG  247 (251)
T ss_pred             EEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCceEEECCC
Confidence            99999999999985432                 134899999999999998888899999988775

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-39  Score=279.98  Aligned_cols=229  Identities=28%  Similarity=0.354  Sum_probs=198.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++..++..+++... .+.++.++++|+++++++.++++++.
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988888887777653 23468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|++|||||.....+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  145 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFADPL----------------AMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIAS  145 (260)
T ss_pred             HHhCCCcEEEECCCcCCCCChh----------------hCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECC
Confidence            9999999999999976433222                237899999999999999999999999998877789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+||
T Consensus       146 ~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~el~~~gIr  182 (260)
T PRK07063        146 THAFKII-------------------------------------------PGCFPYPVAKHGLLGLTRALGIEYAARNVR  182 (260)
T ss_pred             hhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCeE
Confidence            9776543                                           456789999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+++|++....                     ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       183 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~~~~itG~~i~vdgg~  254 (260)
T PRK07063        183 VNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDEAPFINATCITIDGGR  254 (260)
T ss_pred             EEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccccCCcEEEECCCe
Confidence            99999999999985321                     1248999999999999988888999999888753

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-39  Score=278.95  Aligned_cols=227  Identities=26%  Similarity=0.311  Sum_probs=198.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|+++.++++++++++.+
T Consensus         1 ~~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          1 MMRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG-GEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999888888777776544 4588899999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|++|||||+... .+..                +.+.++|++++++|+.+++.+++.++|.|++++.++||++||
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS  143 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVA----------------EMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTST  143 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            99999999999998643 2222                238899999999999999999999999999888899999999


Q ss_pred             CCCcc-cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          160 SLGKL-MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       160 ~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      ..+.. +.                                           ++...|++||+|++.++++++.|+  .+|
T Consensus       144 ~~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  180 (254)
T PRK07478        144 FVGHTAGF-------------------------------------------PGMAAYAASKAGLIGLTQVLAAEYGAQGI  180 (254)
T ss_pred             hHhhccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCE
Confidence            87652 22                                           456789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+++|++.+..                 ...+|+++|+.++++++......+|+.+..++.
T Consensus       181 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  248 (254)
T PRK07478        181 RVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGTALLVDGG  248 (254)
T ss_pred             EEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCeEEeCCc
Confidence            999999999999975432                 134899999999999988888899999988765

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-38  Score=281.17  Aligned_cols=226  Identities=20%  Similarity=0.247  Sum_probs=186.3

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|++|++|||||++  |||+++|++|+++|++|++.+|+.... +..+++....+. ..++++|++|.++++++++++.+
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~   81 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEK   81 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHH
Confidence            47899999999997  999999999999999999999875432 233444332222 35789999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..            ..+.+.+.++|++++++|+.++++++++++|+|++  +|+||++||.
T Consensus        82 ~~g~iD~lVnnAG~~~~~~~~------------~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~  147 (271)
T PRK06505         82 KWGKLDFVVHAIGFSDKNELK------------GRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYG  147 (271)
T ss_pred             HhCCCCEEEECCccCCCcccc------------CChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCC
Confidence            999999999999975422110            01123488999999999999999999999999973  4899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           +++..|++||+|+.+|+|+|+.|+  .+|||
T Consensus       148 ~~~~~~-------------------------------------------~~~~~Y~asKaAl~~l~r~la~el~~~gIrV  184 (271)
T PRK06505        148 GSTRVM-------------------------------------------PNYNVMGVAKAALEASVRYLAADYGPQGIRV  184 (271)
T ss_pred             CccccC-------------------------------------------CccchhhhhHHHHHHHHHHHHHHHhhcCeEE
Confidence            876543                                           456789999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++....                 ...+|||+|+.++|++++.....+|+.+..++.
T Consensus       185 n~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG  250 (271)
T PRK06505        185 NAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG  250 (271)
T ss_pred             EEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence            9999999999974311                 124899999999999998888899999988775

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-39  Score=280.39  Aligned_cols=237  Identities=18%  Similarity=0.165  Sum_probs=197.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++| +.+.++...++++...+.++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   82 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKID   82 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999998875 45555666666655445578999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|++|||||+.......          ......+.+.+++.+.+++|+.+++.+++.++|.|++.+.++||++||
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~----------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS  152 (260)
T PRK08416         83 EDFDRVDFFISNAIISGRAVVG----------GYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSS  152 (260)
T ss_pred             HhcCCccEEEECcccccccccc----------ccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEec
Confidence            9999999999999975321100          001122347899999999999999999999999999877789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++|+.|+  .+|+
T Consensus       153 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~el~~~gi~  189 (260)
T PRK08416        153 TGNLVYI-------------------------------------------ENYAGHGTSKAAVETMVKYAATELGEKNIR  189 (260)
T ss_pred             cccccCC-------------------------------------------CCcccchhhHHHHHHHHHHHHHHhhhhCeE
Confidence            8776543                                           456789999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccccC
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF  290 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~~  290 (290)
                      ||+|+||+++|++.+..                 ...+|+++++.++++++......+|+.+..++...|
T Consensus       190 v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        190 VNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             EEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhhcccCcEEEEcCCeec
Confidence            99999999999985432                 135899999999999988778899999998886543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.4e-38  Score=278.89  Aligned_cols=230  Identities=23%  Similarity=0.274  Sum_probs=191.2

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      |.++++|+++||||+  +|||+++|++|+++|++|++.+|+.+  +.++..+++.... ..+.++++|++|.++++++++
T Consensus         1 ~~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          1 MLDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL-NPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             CcccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhcc-CcceEeecCcCCHHHHHHHHH
Confidence            678899999999986  89999999999999999999877643  3455566665443 346788999999999999999


Q ss_pred             HHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           77 FIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      ++.++++++|++|||||+......            ...+.+.+.++|++++++|+.++++++++++|+|++  .|+||+
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~------------~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~  145 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEEL------------IGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVT  145 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccc------------cCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEE
Confidence            999999999999999997532100            011223488999999999999999999999999974  489999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++...|++||+|+.+++++|+.|+  .
T Consensus       146 isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~  182 (258)
T PRK07370        146 LTYLGGVRAI-------------------------------------------PNYNVMGVAKAALEASVRYLAAELGPK  182 (258)
T ss_pred             EeccccccCC-------------------------------------------cccchhhHHHHHHHHHHHHHHHHhCcC
Confidence            9998876543                                           456889999999999999999999  4


Q ss_pred             CeEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          235 NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+||+++|++.+..                 ...+|+|+++.++|++++.....+|+.+..++..
T Consensus       183 gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~~tG~~i~vdgg~  253 (258)
T PRK07370        183 NIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASGITGQTIYVDAGY  253 (258)
T ss_pred             CeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhccccCcEEEECCcc
Confidence            89999999999999975321                 1247899999999999988889999998887753

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.6e-38  Score=280.51  Aligned_cols=225  Identities=25%  Similarity=0.335  Sum_probs=195.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+ +++++..+++...+ .++.++.+|+++.+++.++++++.+
T Consensus         1 m~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   78 (272)
T PRK08589          1 MKRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNG-GKAKAYHVDISDEQQVKDFASEIKE   78 (272)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcC-CeEEEEEeecCCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999 77777777775543 4588999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+... .+.                .+.+.+.|++++++|+.+++.+++.++|+|++++ ++||++||
T Consensus        79 ~~g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS  141 (272)
T PRK08589         79 QFGRVDVLFNNAGVDNAAGRI----------------HEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSS  141 (272)
T ss_pred             HcCCcCEEEECCCCCCCCCCc----------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCc
Confidence            99999999999998642 222                1237899999999999999999999999998664 89999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       142 ~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~  178 (272)
T PRK08589        142 FSGQAAD-------------------------------------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIR  178 (272)
T ss_pred             hhhcCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            9876543                                           445789999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+|+|++....                       ...+|+++++.+++++++.....+|+.+..++.
T Consensus       179 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        179 ANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             EEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            99999999999985421                       124799999999999998888899999887765

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=282.52  Aligned_cols=226  Identities=25%  Similarity=0.300  Sum_probs=194.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---------ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE---------KGGLEAVEKLKHSGFDNVIFHQLDVADPAAI   71 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   71 (290)
                      |..+++|++|||||++|||+++|++|+++|++|++++|+.         +.+++..+++...+ .++.++.+|++|++++
T Consensus         1 m~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v   79 (286)
T PRK07791          1 MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG-GEAVANGDDIADWDGA   79 (286)
T ss_pred             CCccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcC-CceEEEeCCCCCHHHH
Confidence            7788999999999999999999999999999999998876         55666666665443 4588899999999999


Q ss_pred             HHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-
Q 039097           72 HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-  150 (290)
Q Consensus        72 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-  150 (290)
                      .++++++.++++++|++|||||+....+..                +.+.++|++++++|+.++++++++++|+|++.. 
T Consensus        80 ~~~~~~~~~~~g~id~lv~nAG~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  143 (286)
T PRK07791         80 ANLVDAAVETFGGLDVLVNNAGILRDRMIA----------------NMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESK  143 (286)
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999986543332                338899999999999999999999999997542 


Q ss_pred             -----CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHH
Q 039097          151 -----SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAY  225 (290)
Q Consensus       151 -----~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~  225 (290)
                           .|+||++||..+..+.                                           ++...|++||+|+++|
T Consensus       144 ~~~~~~g~Iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l  180 (286)
T PRK07791        144 AGRAVDARIINTSSGAGLQGS-------------------------------------------VGQGNYSAAKAGIAAL  180 (286)
T ss_pred             cCCCCCcEEEEeCchhhCcCC-------------------------------------------CCchhhHHHHHHHHHH
Confidence                 3799999999887654                                           5668999999999999


Q ss_pred             HHHHHhhC--CCeEEEEeecceeecCcccCC-------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          226 TRILAKKY--PNFCINCVCPGYVKTEMTYNA-------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       226 ~~~la~e~--~~i~vn~v~PG~v~T~~~~~~-------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++++.|+  .+|+||+|+|| +.|++....             ...+||++|+.++++++......+|+++..++.
T Consensus       181 ~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~~~~~~~~~~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        181 TLVAAAELGRYGVTVNAIAPA-ARTRMTETVFAEMMAKPEEGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             HHHHHHHHHHhCeEEEEECCC-CCCCcchhhHHHHHhcCcccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            99999998  58999999999 788875321             135899999999999998888899999988875

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-38  Score=277.10  Aligned_cols=229  Identities=25%  Similarity=0.284  Sum_probs=196.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++..+.+|++++++++++++++.+
T Consensus         4 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          4 LFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSG-GKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999888888777776544 4688899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      .++++|+||||||.....+..                +.+.++|++++++|+.+++.+++++.|.|+++. +++||++||
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS  146 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPML----------------DMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTAS  146 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECc
Confidence            999999999999986543322                238899999999999999999999999997654 579999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+.....                                         |.+...|++||+|+++++++++.|+  .+|+
T Consensus       147 ~~~~~~~~-----------------------------------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~  185 (253)
T PRK05867        147 MSGHIINV-----------------------------------------PQQVSHYCASKAAVIHLTKAMAVELAPHKIR  185 (253)
T ss_pred             HHhcCCCC-----------------------------------------CCCccchHHHHHHHHHHHHHHHHHHhHhCeE
Confidence            87653210                                         1234689999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+++|++....              ...+|+|+|+.+++++++.....+|+.+..++.
T Consensus       186 vn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgG  249 (253)
T PRK05867        186 VNSVSPGYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGSDIVIDGG  249 (253)
T ss_pred             EEEeecCCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcCCCeEEECCC
Confidence            99999999999986431              135899999999999998888999999998875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.2e-38  Score=277.62  Aligned_cols=229  Identities=16%  Similarity=0.165  Sum_probs=188.1

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |.++++|+++||||+  +|||+++|++|+++|++|++++|+... ++..+++... .+.++.++++|++|++++.+++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            447889999999997  899999999999999999999876422 2223333222 134688899999999999999999


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      +.++++++|++|||||+.......            ....+.+.++|.+.+++|+.+++++++.++|+|++  +|+||++
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~i  146 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLR------------GEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTL  146 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCC------------CccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEE
Confidence            999999999999999976321100            11124488999999999999999999999999974  5899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++...|++||+|+++|+++++.|+  .+
T Consensus       147 sS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~g  183 (257)
T PRK08594        147 TYLGGERVV-------------------------------------------QNYNVMGVAKASLEASVKYLANDLGKDG  183 (257)
T ss_pred             cccCCccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcC
Confidence            999886643                                           456789999999999999999999  48


Q ss_pred             eEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          236 FCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||||+|+||+++|++....                 ...+||++|+.++|++++.....+|+.+..++.
T Consensus       184 Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~~~~tG~~~~~dgg  252 (257)
T PRK08594        184 IRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLSRGVTGENIHVDSG  252 (257)
T ss_pred             CEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcccccccceEEEECCc
Confidence            9999999999999874311                 135899999999999998888899999988775

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-38  Score=278.00  Aligned_cols=230  Identities=19%  Similarity=0.154  Sum_probs=190.6

Q ss_pred             CCcCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |..+++|+++||||  ++|||+++|++|+++|++|++.+|+. +.++..+++....+. ...++||++|.+++.++++++
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~   78 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDS-ELVFRCDVASDDEINQVFADL   78 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCC-ceEEECCCCCHHHHHHHHHHH
Confidence            78899999999997  67999999999999999999988863 344555566444333 457899999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|++|||||+.........           ...+.+.++|++++++|+.+++++++.++|.|+++ .|+||++|
T Consensus        79 ~~~~g~iD~lVnnAG~~~~~~~~~~-----------~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~is  146 (261)
T PRK08690         79 GKHWDGLDGLVHSIGFAPKEALSGD-----------FLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALS  146 (261)
T ss_pred             HHHhCCCcEEEECCccCCccccccc-----------hhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEc
Confidence            9999999999999998643211000           01134788999999999999999999999999755 48999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+.+++++++.|+  .+|
T Consensus       147 s~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI  183 (261)
T PRK08690        147 YLGAVRAI-------------------------------------------PNYNVMGMAKASLEAGIRFTAACLGKEGI  183 (261)
T ss_pred             ccccccCC-------------------------------------------CCcccchhHHHHHHHHHHHHHHHhhhcCe
Confidence            99876543                                           566889999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |||+|+||+++|++....                 ...+|||+|+.++|++++.....+|+.+..++.
T Consensus       184 rVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~~~tG~~i~vdgG  251 (261)
T PRK08690        184 RCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGG  251 (261)
T ss_pred             EEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence            999999999999975321                 134899999999999998888899999998875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-38  Score=277.46  Aligned_cols=226  Identities=18%  Similarity=0.197  Sum_probs=187.3

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+++|+++||||++  |||+++|++|+++|++|++.+|+. +.++..+++....+. ..+++||++|+++++++++++.+
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999997  999999999999999999999873 344555666544322 34678999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+......            .....+.+.++|++++++|+.+++.+++.+.|+|++  +|+||++||.
T Consensus        83 ~~g~iDilVnnag~~~~~~~------------~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~  148 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNEL------------KGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYY  148 (260)
T ss_pred             HcCCccEEEEccccCCcccc------------cCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecC
Confidence            99999999999997532110            011234488999999999999999999999999963  5899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+.+|+++|+.|+  .+|+|
T Consensus       149 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrV  185 (260)
T PRK06603        149 GAEKVI-------------------------------------------PNYNVMGVAKAALEASVKYLANDMGENNIRV  185 (260)
T ss_pred             ccccCC-------------------------------------------CcccchhhHHHHHHHHHHHHHHHhhhcCeEE
Confidence            776543                                           456789999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++....                 ...+|||+|+.++|++++.....+|+.+..++.
T Consensus       186 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  251 (260)
T PRK06603        186 NAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEIHYVDCG  251 (260)
T ss_pred             EEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCcceEEEeCCc
Confidence            9999999999974310                 125899999999999998888899999988775

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-38  Score=277.24  Aligned_cols=226  Identities=26%  Similarity=0.290  Sum_probs=197.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++++++..+++....+ .++.++.+|++|.+++.++++++.+.
T Consensus         5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR   84 (265)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999999888887777766543 36889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||.....+..                +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..
T Consensus        85 ~g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  148 (265)
T PRK07062         85 FGGVDMLVNNAGQGRVSTFA----------------DTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLL  148 (265)
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEecccc
Confidence            99999999999986443332                23789999999999999999999999999988779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|+|+.+++++++.|+  .+|+||
T Consensus       149 ~~~~~-------------------------------------------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~  185 (265)
T PRK07062        149 ALQPE-------------------------------------------PHMVATSAARAGLLNLVKSLATELAPKGVRVN  185 (265)
T ss_pred             ccCCC-------------------------------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            87653                                           456789999999999999999999  489999


Q ss_pred             EeecceeecCcccC------------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN------------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~------------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+++|++...                        .   ...+|+++|+.+++++++.....+|+.+..++.
T Consensus       186 ~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg  260 (265)
T PRK07062        186 SILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLASPLSSYTTGSHIDVSGG  260 (265)
T ss_pred             EEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence            99999999997431                        0   124799999999999987778899999988875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-38  Score=277.67  Aligned_cols=229  Identities=19%  Similarity=0.168  Sum_probs=189.6

Q ss_pred             CCcCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |..+++|++|||||++  |||+++|++|+++|++|++.+|+ .+.++..+++....+ .+.++.||++|+++++++++++
T Consensus         1 ~~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   78 (262)
T PRK07984          1 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLG-SDIVLPCDVAEDASIDAMFAEL   78 (262)
T ss_pred             CcccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccC-CceEeecCCCCHHHHHHHHHHH
Confidence            7789999999999986  99999999999999999999987 345555666654433 3677899999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|++|||||+........           ....+.+.++|++.+++|+.+++.+++.+.|.++  .+|+||++|
T Consensus        79 ~~~~g~iD~linnAg~~~~~~~~~-----------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~is  145 (262)
T PRK07984         79 GKVWPKFDGFVHSIGFAPGDQLDG-----------DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLS  145 (262)
T ss_pred             HhhcCCCCEEEECCccCCccccCC-----------cchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEe
Confidence            999999999999999753221100           0012347899999999999999999999999765  348999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++|+++++.|+  .+|
T Consensus       146 s~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI  182 (262)
T PRK07984        146 YLGAERAI-------------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGV  182 (262)
T ss_pred             cCCCCCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCc
Confidence            98776543                                           456789999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |||+|+||+++|++....                 ...+|||+++.++|++++.....+|+.+..++.
T Consensus       183 rVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG~~i~vdgg  250 (262)
T PRK07984        183 RVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  250 (262)
T ss_pred             EEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            999999999999864311                 234899999999999998888899999988775

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.3e-38  Score=276.58  Aligned_cols=227  Identities=19%  Similarity=0.205  Sum_probs=186.7

Q ss_pred             CcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+... .+..+++....+ ...+++||++|.++++++++++.
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~   83 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIA   83 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHH
Confidence            46789999999998  599999999999999999999998643 223334432222 35678999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|++|||||+....+..            ..+.+.+.++|++++++|+.+++++++.++|+|++  .++||++||
T Consensus        84 ~~~g~ld~lv~nAg~~~~~~~~------------~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss  149 (258)
T PRK07533         84 EEWGRLDFLLHSIAFAPKEDLH------------GRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSY  149 (258)
T ss_pred             HHcCCCCEEEEcCccCCccccc------------CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEec
Confidence            9999999999999975321110            11223488999999999999999999999999963  589999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+.+|+++|+.|+  .+|+
T Consensus       150 ~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~  186 (258)
T PRK07533        150 YGAEKVV-------------------------------------------ENYNLMGPVKAALESSVRYLAAELGPKGIR  186 (258)
T ss_pred             cccccCC-------------------------------------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            8775543                                           456789999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+++|++.+..                 ...+|+++|+.++|++++.....+|+.+..++.
T Consensus       187 Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~itG~~i~vdgg  253 (258)
T PRK07533        187 VHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGG  253 (258)
T ss_pred             EEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhccccCcEEeeCCc
Confidence            99999999999985431                 134789999999999988778899999988875

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=5.4e-38  Score=275.13  Aligned_cols=217  Identities=28%  Similarity=0.339  Sum_probs=189.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+....            .++.+++||++++++++++++++.+
T Consensus         1 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------~~~~~~~~D~~~~~~i~~~~~~~~~   68 (258)
T PRK06398          1 DLGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------NDVDYFKVDVSNKEQVIKGIDYVIS   68 (258)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999986432            1478899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.+++.+++.++|+|+++..++||++||.
T Consensus        69 ~~~~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~  132 (258)
T PRK06398         69 KYGRIDILVNNAGIESYGAIH----------------AVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASV  132 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcc
Confidence            999999999999986443332                2388999999999999999999999999988778999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN  239 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn  239 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+ ++|+||
T Consensus       133 ~~~~~~-------------------------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn  169 (258)
T PRK06398        133 QSFAVT-------------------------------------------RNAAAYVTSKHAVLGLTRSIAVDYAPTIRCV  169 (258)
T ss_pred             hhccCC-------------------------------------------CCCchhhhhHHHHHHHHHHHHHHhCCCCEEE
Confidence            876543                                           456899999999999999999998 469999


Q ss_pred             EeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++....                          ...+|+++|+.++++++......+|+.+..++..
T Consensus       170 ~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~  244 (258)
T PRK06398        170 AVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLASFITGECVTVDGGL  244 (258)
T ss_pred             EEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence            999999999974321                          1238999999999999988788899998887753

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=271.99  Aligned_cols=229  Identities=24%  Similarity=0.273  Sum_probs=195.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.++ .++..+++...+ .++.++.+|+++++++.++++++.
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAG-RRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999998643 455566665443 468889999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|++|||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.++||++||
T Consensus        82 ~~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  145 (254)
T PRK06114         82 AELGALTLAVNAAGIANANPAE----------------EMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIAS  145 (254)
T ss_pred             HHcCCCCEEEECCCCCCCCChH----------------hCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECc
Confidence            9999999999999986543332                238899999999999999999999999998887899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+..                                         ......|+++|+|+++++++++.|+  .+|+
T Consensus       146 ~~~~~~~~-----------------------------------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~  184 (254)
T PRK06114        146 MSGIIVNR-----------------------------------------GLLQAHYNASKAGVIHLSKSLAMEWVGRGIR  184 (254)
T ss_pred             hhhcCCCC-----------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            98765430                                         0124789999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+++|++....                ...+|||+++.++|++++...+.+|+.+..++.
T Consensus       185 v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~tG~~i~~dgg  250 (254)
T PRK06114        185 VNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCTGVDLLVDGG  250 (254)
T ss_pred             EEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEEECcC
Confidence            99999999999986421                134789999999999998888999999888765

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-37  Score=272.40  Aligned_cols=229  Identities=20%  Similarity=0.194  Sum_probs=185.5

Q ss_pred             CCcCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |..+++|++|||||  ++|||+++|++|+++|++|++++|... .++..+++....+. ..++++|++|+++++++++++
T Consensus         1 ~~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~   78 (260)
T PRK06997          1 MGFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASL   78 (260)
T ss_pred             CCccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHH
Confidence            77899999999996  689999999999999999999876522 22333444333222 346899999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|++|||||+.........           ...+.+.++|++.+++|+.++++++++++|+|+  ..|+||++|
T Consensus        79 ~~~~g~iD~lvnnAG~~~~~~~~~~-----------~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~is  145 (260)
T PRK06997         79 GQHWDGLDGLVHSIGFAPREAIAGD-----------FLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLS  145 (260)
T ss_pred             HHHhCCCcEEEEccccCCccccccc-----------cchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEe
Confidence            9999999999999998643211000           011247899999999999999999999999995  348999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+.+++++|+.|+  .+|
T Consensus       146 s~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI  182 (260)
T PRK06997        146 YLGAERVV-------------------------------------------PNYNTMGLAKASLEASVRYLAVSLGPKGI  182 (260)
T ss_pred             ccccccCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCe
Confidence            98876543                                           456789999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |||+|+||+++|++....                 ...+|||+++.+++++++.....+|+.+..++.
T Consensus       183 rVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~itG~~i~vdgg  250 (260)
T PRK06997        183 RANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGEITHVDSG  250 (260)
T ss_pred             EEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCcceeEEEEcCC
Confidence            999999999999874311                 124899999999999998888899999988875

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=272.85  Aligned_cols=225  Identities=21%  Similarity=0.239  Sum_probs=183.6

Q ss_pred             CCcCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCc--ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDE--KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         1 m~~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      |..+++|+++||||  ++|||+++|++|+++|++|++++|+.  +..++..+++    +.++.++++|++|+++++++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL----PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc----CCCCcEEeCCCCCHHHHHHHHH
Confidence            45689999999999  89999999999999999999999864  2223333322    2357789999999999999999


Q ss_pred             HHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           77 FIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      ++.++++++|++|||||+.......            ..+.+.+.++|++++++|+.+++++++.++|+|++  +|+||+
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~  143 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALG------------GNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVG  143 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccC------------CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEE
Confidence            9999999999999999986321110            01123478999999999999999999999999973  489999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +|+.. ..+.                                           +.+..|++||+|+.+|+++|+.|+  .
T Consensus       144 is~~~-~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~  179 (256)
T PRK07889        144 LDFDA-TVAW-------------------------------------------PAYDWMGVAKAALESTNRYLARDLGPR  179 (256)
T ss_pred             Eeecc-cccC-------------------------------------------CccchhHHHHHHHHHHHHHHHHHhhhc
Confidence            98653 2211                                           345779999999999999999999  5


Q ss_pred             CeEEEEeecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          235 NFCINCVCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|+||+++|++.+..                  ...+|+|+|+.+++++++.....+|+++..++.
T Consensus       180 gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        180 GIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             CeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            89999999999999985421                  135899999999999998888899999988775

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-38  Score=280.20  Aligned_cols=233  Identities=20%  Similarity=0.201  Sum_probs=186.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc----------ccHHHHHHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE----------KGGLEAVEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.          +.+++..+++... +.++.+++||++++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA-GGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc-CCceEEEEcCCCCHHH
Confidence            5678999999999999999999999999999999999984          3444555555443 3457889999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEcc-ccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           71 IHSVADFIRSHFGKLDILVNNA-GITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~A-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      ++++++++.+.++++|++|||| |.......            ...+.+.+.++|.+++++|+.++++++++++|+|+++
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~  149 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEW------------GKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR  149 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCccccccccc------------CCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC
Confidence            9999999999999999999999 74211000            0011234789999999999999999999999999877


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                      .+|+||++||..+.....                                       . .++...|++||+|+.+|+++|
T Consensus       150 ~~g~IV~isS~~~~~~~~---------------------------------------~-~~~~~~Y~asKaal~~lt~~L  189 (305)
T PRK08303        150 PGGLVVEITDGTAEYNAT---------------------------------------H-YRLSVFYDLAKTSVNRLAFSL  189 (305)
T ss_pred             CCcEEEEECCccccccCc---------------------------------------C-CCCcchhHHHHHHHHHHHHHH
Confidence            779999999976532110                                       0 023568999999999999999


Q ss_pred             HhhC--CCeEEEEeecceeecCcccC---------------CC----CCChhhhccchhhhhhccC-CCCceeEeecCc
Q 039097          230 AKKY--PNFCINCVCPGYVKTEMTYN---------------AG----RLTVEEGAESPVWLALLHK-GGPSGLFFSRKE  286 (290)
Q Consensus       230 a~e~--~~i~vn~v~PG~v~T~~~~~---------------~~----~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~~  286 (290)
                      +.|+  .+||||+|+||++.|+|...               .+    ..+||++|+.++++++++. ...+|+++..+.
T Consensus       190 a~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peevA~~v~fL~s~~~~~~itG~~l~~~~  268 (305)
T PRK08303        190 AHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYVGRAVAALAADPDVARWNGQSLSSGQ  268 (305)
T ss_pred             HHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHHHHHHHHHHcCcchhhcCCcEEEhHH
Confidence            9999  38999999999999997421               11    1379999999999999875 468999987543

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=274.26  Aligned_cols=225  Identities=18%  Similarity=0.222  Sum_probs=185.2

Q ss_pred             CCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++|++|||||+  +|||+++|++|+++|++|++++|+. ...+..+++.+..+ ....+++|++|+++++++++++.++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHh
Confidence            678999999997  8999999999999999999998863 23344444443322 2557899999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||+....+..            ..+.+.+.++|++++++|+.+++++++.++|+|++  +|+||++||..
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~------------~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~  151 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELT------------GRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYG  151 (272)
T ss_pred             cCCCcEEEECCcccCccccc------------cCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccc
Confidence            99999999999986421100            01123488999999999999999999999999964  48999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+.+|+++|+.|+  .+|+||
T Consensus       152 ~~~~~-------------------------------------------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn  188 (272)
T PRK08159        152 AEKVM-------------------------------------------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVN  188 (272)
T ss_pred             cccCC-------------------------------------------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEE
Confidence            65443                                           556889999999999999999999  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                 ...+|||+|+.++|++++.....+|+.+..++.
T Consensus       189 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        189 AISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             EeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            999999999874211                 124899999999999998888899999988875

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-37  Score=270.51  Aligned_cols=222  Identities=26%  Similarity=0.263  Sum_probs=192.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.+++||+++++++.++++++.+
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~   76 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL----GERARFIATDITDDAAIERAVATVVA   76 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999987666655554    24688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|++|||||.......                 +.+.++|++.+++|+.+++.+++.++|+|+ +..++||++||.
T Consensus        77 ~~g~id~lv~~ag~~~~~~~-----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~  138 (261)
T PRK08265         77 RFGRVDILVNLACTYLDDGL-----------------ASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSI  138 (261)
T ss_pred             HhCCCCEEEECCCCCCCCcC-----------------cCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECch
Confidence            99999999999997643221                 237899999999999999999999999997 556899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.++++++.|+  .+|+|
T Consensus       139 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  175 (261)
T PRK08265        139 SAKFAQ-------------------------------------------TGRWLYPASKAAIRQLTRSMAMDLAPDGIRV  175 (261)
T ss_pred             hhccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCEEE
Confidence            877654                                           456789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++....                   ...+|+|+|+.++++++......+|+.+..++.
T Consensus       176 n~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        176 NSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             EEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence            9999999999974321                   123789999999999988778899999888775

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=2e-37  Score=276.48  Aligned_cols=223  Identities=15%  Similarity=0.191  Sum_probs=184.9

Q ss_pred             cCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc--------C-C---CcEEEEEeeC--C
Q 039097            3 ETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS--------G-F---DNVIFHQLDV--A   66 (290)
Q Consensus         3 ~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~--------~-~---~~~~~~~~Dl--~   66 (290)
                      +++||++|||||  ++|||+++|++|+++|++|++ +|+.+++++..+.+...        . +   .....+.+|+  +
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   84 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFD   84 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecC
Confidence            589999999999  899999999999999999999 88888887777666421        1 1   1246788999  4


Q ss_pred             C------------------HHHHHHHHHHHHhhcCCccEEEEccccCCC--CCCCCcccchhhhcccccccccChHHHHH
Q 039097           67 D------------------PAAIHSVADFIRSHFGKLDILVNNAGITGI--SSDADTLSGFIEEGVARGKMTQTYESAEK  126 (290)
Q Consensus        67 ~------------------~~~v~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (290)
                      +                  +++++++++++.+++|++|+||||||....  .+.                .+.+.++|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~----------------~~~~~e~~~~  148 (303)
T PLN02730         85 TPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPL----------------LETSRKGYLA  148 (303)
T ss_pred             ccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCCh----------------hhCCHHHHHH
Confidence            3                  348999999999999999999999986421  222                2348999999


Q ss_pred             hhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCC
Q 039097          127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETK  206 (290)
Q Consensus       127 ~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (290)
                      ++++|+.+++++++.++|+|+++  |+||++||..+..+.                                        
T Consensus       149 ~~~vN~~~~~~l~~~~~p~m~~~--G~II~isS~a~~~~~----------------------------------------  186 (303)
T PLN02730        149 AISASSYSFVSLLQHFGPIMNPG--GASISLTYIASERII----------------------------------------  186 (303)
T ss_pred             HHHHHhHHHHHHHHHHHHHHhcC--CEEEEEechhhcCCC----------------------------------------
Confidence            99999999999999999999753  899999999876643                                        


Q ss_pred             CCCCCc-hhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccCC-----------------CCCChhhhccc
Q 039097          207 GWPANA-AAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAES  265 (290)
Q Consensus       207 ~~~~~~-~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~  265 (290)
                         ++. ..|++||+|+++|+++|+.|+ +  +||||+|+||+++|+|.+..                 ...+|++++..
T Consensus       187 ---p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~peevA~~  263 (303)
T PLN02730        187 ---PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNA  263 (303)
T ss_pred             ---CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               323 479999999999999999998 3  79999999999999986421                 12489999999


Q ss_pred             hhhhhhccCCCCceeEeecCcc
Q 039097          266 PVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       266 ~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++|++++.....+|+.+..++.
T Consensus       264 ~~fLaS~~a~~itG~~l~vdGG  285 (303)
T PLN02730        264 AAFLASPLASAITGATIYVDNG  285 (303)
T ss_pred             HHHHhCccccCccCCEEEECCC
Confidence            9999998888899998887654

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=7.8e-37  Score=268.29  Aligned_cols=231  Identities=33%  Similarity=0.357  Sum_probs=197.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |..++||++|||||++|||+++|++|++.|++|++++|+.+.+++..+++....  +.++..+.||+++++++++++++.
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999988888876654  347999999999999999999999


Q ss_pred             Hhh-cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccc-hHHHHHHHhchhhccCCCCeEEE
Q 039097           79 RSH-FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYL-GAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        79 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~-~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      .++ +|++|++|||||......               ...+.+.++|++++++|+. +.+.+.+.+.++++++.+++|++
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~---------------~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~  147 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTG---------------SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVN  147 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCC---------------ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEE
Confidence            999 799999999999986543               1124499999999999999 57777788888888878899999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+..                                          +....|+++|+|+++|+|++|.|+  .
T Consensus       148 ~ss~~~~~~~~------------------------------------------~~~~~Y~~sK~al~~ltr~lA~El~~~  185 (270)
T KOG0725|consen  148 ISSVAGVGPGP------------------------------------------GSGVAYGVSKAALLQLTRSLAKELAKH  185 (270)
T ss_pred             EeccccccCCC------------------------------------------CCcccchhHHHHHHHHHHHHHHHHhhc
Confidence            99998876531                                          111789999999999999999999  4


Q ss_pred             CeEEEEeecceeecCcccC------------------C----CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          235 NFCINCVCPGYVKTEMTYN------------------A----GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~------------------~----~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||||+|.||.+.|++...                  .    ....|+|+++.+.+++.+...+.+|+-+..++..
T Consensus       186 gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla~~~asyitG~~i~vdgG~  261 (270)
T KOG0725|consen  186 GIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLASDDASYITGQTIIVDGGF  261 (270)
T ss_pred             CcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence            8999999999999997210                  0    1348999999999999987668999988887754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=267.55  Aligned_cols=227  Identities=23%  Similarity=0.241  Sum_probs=189.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+.+++|++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++.++++|+++.++++++++++.+
T Consensus         1 ~~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (263)
T PRK06200          1 MGWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----GDHVLVVEGDVTSYADNQRAVDQTVD   76 (263)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999987766554443    34578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      .++++|++|||||+... .+..+.            ..+...+.|++++++|+.+++.+++.++|.|++. .++||++||
T Consensus        77 ~~g~id~li~~ag~~~~~~~~~~~------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS  143 (263)
T PRK06200         77 AFGKLDCFVGNAGIWDYNTSLVDI------------PAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLS  143 (263)
T ss_pred             hcCCCCEEEECCCCcccCCCcccC------------ChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECC
Confidence            99999999999998542 221111            0011223499999999999999999999998765 489999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~v  238 (290)
                      ..+..+.                                           ++...|++||+|++.++++++.++ ++|+|
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~el~~~Irv  180 (263)
T PRK06200        144 NSSFYPG-------------------------------------------GGGPLYTASKHAVVGLVRQLAYELAPKIRV  180 (263)
T ss_pred             hhhcCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhcCcEE
Confidence            9876543                                           455789999999999999999999 67999


Q ss_pred             EEeecceeecCcccC------------C--------------CCCChhhhccchhhhhhcc-CCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYN------------A--------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~------------~--------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++...            .              ...+|+|+|+.+++++++. ....+|+.+..++.
T Consensus       181 n~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG  256 (263)
T PRK06200        181 NGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG  256 (263)
T ss_pred             EEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence            999999999997531            0              1248999999999999988 78899999988875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-36  Score=264.92  Aligned_cols=226  Identities=22%  Similarity=0.281  Sum_probs=196.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++.+..+++...+ .++.++.+|+++++++.++++++.+.
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEG-IKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            35679999999999999999999999999999999999888877777776543 35788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.++|++++++|+.+++.+++.+.+.|++++.++||++||..
T Consensus        84 ~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~  147 (254)
T PRK08085         84 IGPIDVLINNAGIQRRHPFT----------------EFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQ  147 (254)
T ss_pred             cCCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccch
Confidence            99999999999986443332                23889999999999999999999999999877779999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.++++++.++  .+|+||
T Consensus       148 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  184 (254)
T PRK08085        148 SELGR-------------------------------------------DTITPYAASKGAVKMLTRGMCVELARHNIQVN  184 (254)
T ss_pred             hccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence            76543                                           455789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                 ...+|||+|+.++++++......+|+.+..++.
T Consensus       185 ~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~~i~~dgg  249 (254)
T PRK08085        185 GIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFVDGG  249 (254)
T ss_pred             EEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            999999999986531                 123799999999999998888999999988875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2e-36  Score=264.89  Aligned_cols=225  Identities=25%  Similarity=0.304  Sum_probs=193.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+ .+.++..+.+...+ .++.++.+|+++.+++.++++++.+.
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG-RKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998 44555555554333 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..
T Consensus        89 ~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (258)
T PRK06935         89 FGKIDILVNNAGTIRRAPLL----------------EYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASML  152 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHH
Confidence            99999999999986543332                23789999999999999999999999999988789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           +....|+++|+|+++++++++.|+  .+|+||
T Consensus       153 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  189 (258)
T PRK06935        153 SFQGG-------------------------------------------KFVPAYTASKHGVAGLTKAFANELAAYNIQVN  189 (258)
T ss_pred             hccCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            76543                                           456789999999999999999999  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++.+..                 ...+|+|+++.++|++++.....+|+.+..++.
T Consensus       190 ~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  254 (258)
T PRK06935        190 AIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHILAVDGG  254 (258)
T ss_pred             EEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            999999999975421                 235789999999999998888899999988875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=2.2e-36  Score=264.06  Aligned_cols=224  Identities=22%  Similarity=0.238  Sum_probs=190.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++.+++..  ++..+++... +.++..+++|++|.++++++++++.+++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999998887642  3444555443 3468889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~  161 (290)
                      +++|++|||||.....+..                +.+.++|++.+++|+.+++.+++++.|.|++++ +|+||++||..
T Consensus        84 ~~~D~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~  147 (253)
T PRK08993         84 GHIDILVNNAGLIRREDAI----------------EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASML  147 (253)
T ss_pred             CCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchh
Confidence            9999999999986443322                238899999999999999999999999997764 58999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           +....|+++|+|+++++++++.++  .+|+||
T Consensus       148 ~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  184 (253)
T PRK08993        148 SFQGG-------------------------------------------IRVPSYTASKSGVMGVTRLMANEWAKHNINVN  184 (253)
T ss_pred             hccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            76543                                           445789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++....                 ....|+|+|+.+++++++.....+|+.+..++..
T Consensus       185 ~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~~~~dgg~  250 (253)
T PRK08993        185 AIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTIAVDGGW  250 (253)
T ss_pred             EEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCCE
Confidence            999999999985431                 1348999999999999988889999999888753

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=263.11  Aligned_cols=227  Identities=23%  Similarity=0.279  Sum_probs=196.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||++|||.+++++|+++|++|++++|+.+++++..+++...+ .++.++++|+++.+++.++++++.+
T Consensus         3 ~~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          3 LFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAG-GKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            347889999999999999999999999999999999999888777777775543 3578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      .++++|++|||||.... .+..                ..+.+++++.+++|+.+++.++++++|+|+++..++||++||
T Consensus        82 ~~~~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  145 (252)
T PRK07035         82 RHGRLDILVNNAAANPYFGHIL----------------DTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS  145 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence            99999999999997532 2211                238899999999999999999999999998877899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+++++++++++.++  .+|+
T Consensus       146 ~~~~~~~-------------------------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~  182 (252)
T PRK07035        146 VNGVSPG-------------------------------------------DFQGIYSITKAAVISMTKAFAKECAPFGIR  182 (252)
T ss_pred             hhhcCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCEE
Confidence            8776543                                           456789999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+++|++....                 ...+|||+|+.++++++......+|+.+..++.
T Consensus       183 v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        183 VNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             EEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            99999999999985431                 245899999999999998888899999988875

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-36  Score=263.71  Aligned_cols=227  Identities=22%  Similarity=0.221  Sum_probs=191.1

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCc-----------ccHHHHHHHHHhcCCCcEEEEEeeCCC
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDE-----------KGGLEAVEKLKHSGFDNVIFHQLDVAD   67 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~Dl~~   67 (290)
                      |..+++|++|||||+  +|||+++|++|+++|++|++++|+.           .+..+..+++.. .+.++.++++|+++
T Consensus         1 ~~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~D~~~   79 (256)
T PRK12859          1 MNQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK-NGVKVSSMELDLTQ   79 (256)
T ss_pred             CCCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHh-cCCeEEEEEcCCCC
Confidence            778999999999999  4999999999999999999986431           112223333433 23468899999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ  147 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~  147 (290)
                      .+++.++++++.+.++++|++|||||.....+..                +.+.++|++++++|+.+++.+.+.++|.|+
T Consensus        80 ~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~  143 (256)
T PRK12859         80 NDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFS----------------NLTAEELDKHYMVNVRATTLLSSQFARGFD  143 (256)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999986443332                338999999999999999999999999998


Q ss_pred             cCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 039097          148 LSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR  227 (290)
Q Consensus       148 ~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~  227 (290)
                      ++..|+||++||..+..+.                                           ++...|+++|+++++|++
T Consensus       144 ~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~  180 (256)
T PRK12859        144 KKSGGRIINMTSGQFQGPM-------------------------------------------VGELAYAATKGAIDALTS  180 (256)
T ss_pred             hcCCeEEEEEcccccCCCC-------------------------------------------CCchHHHHHHHHHHHHHH
Confidence            8778999999999876543                                           456899999999999999


Q ss_pred             HHHhhC--CCeEEEEeecceeecCcccCC------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          228 ILAKKY--PNFCINCVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       228 ~la~e~--~~i~vn~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++.++  .+|+||+|+||+++|++....            ...+|+|+++.++++++......+|+++..++.
T Consensus       181 ~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg  254 (256)
T PRK12859        181 SLAAEVAHLGITVNAINPGPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAARLIKFLASEEAEWITGQIIHSEGG  254 (256)
T ss_pred             HHHHHhhhhCeEEEEEEEccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence            999998  489999999999999863321            135899999999999988888899999998875

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=273.50  Aligned_cols=214  Identities=27%  Similarity=0.342  Sum_probs=188.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++++++..++++..+ .++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG-AEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            557899999999999999999999999999999999999988888888776544 4588899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||+....+..                +.+.+++++++++|+.+++++++.++|+|+++..|+||++||.
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~----------------~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~  144 (330)
T PRK06139         81 FGGRIDVWVNNVGVGAVGRFE----------------ETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISL  144 (330)
T ss_pred             hcCCCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcCh
Confidence            999999999999986544433                2388999999999999999999999999998878999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC---CCeE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PNFC  237 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~---~~i~  237 (290)
                      .+..+.                                           +....|++||+|+.+|+++|+.|+   ++|+
T Consensus       145 ~~~~~~-------------------------------------------p~~~~Y~asKaal~~~~~sL~~El~~~~gI~  181 (330)
T PRK06139        145 GGFAAQ-------------------------------------------PYAAAYSASKFGLRGFSEALRGELADHPDIH  181 (330)
T ss_pred             hhcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence            876653                                           456899999999999999999998   3799


Q ss_pred             EEEeecceeecCcccC------------CCCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYN------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |++|+||+++|++...            .+..+||++|+.+++.+..++
T Consensus       182 V~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        182 VCDVYPAFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             EEEEecCCccCcccccccccccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999998643            124689999999999887655

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=263.30  Aligned_cols=227  Identities=26%  Similarity=0.324  Sum_probs=197.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++...+ .++.++.+|+++.+++.++++++.+.
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~   81 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG-GEALFVACDVTRDAEVKALVEQTIAA   81 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888777777775543 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||........               .+.+.++|++++++|+.+++.++++++|.|.+++.++||++||..
T Consensus        82 ~g~id~li~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~  146 (253)
T PRK06172         82 YGRLDYAFNNAGIEIEQGRL---------------AEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVA  146 (253)
T ss_pred             hCCCCEEEECCCCCCCCCCh---------------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            99999999999986432211               123889999999999999999999999999877778999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|+|+++++++++.++  .+|+||
T Consensus       147 ~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~  183 (253)
T PRK06172        147 GLGAA-------------------------------------------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN  183 (253)
T ss_pred             hccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            77654                                           456889999999999999999999  489999


Q ss_pred             EeecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++.+..                  ...+|+++++.++|+++......+|+++..++.
T Consensus       184 ~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        184 AVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             EEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            999999999986643                  124799999999999998888999999988875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=4e-36  Score=265.77  Aligned_cols=240  Identities=22%  Similarity=0.252  Sum_probs=197.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+..++..+++...+ .++.++++|+++++++.++++++.+.+
T Consensus         7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (278)
T PRK08277          7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAG-GEALAVKADVLDKESLEQARQQILEDF   85 (278)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999887777777775543 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||...+....+..+.. .......+.+.+.++|++.+++|+.+++.+++.++|.|++.+.++||++||..+
T Consensus        86 g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  164 (278)
T PRK08277         86 GPCDILINGAGGNHPKATTDNEFHE-LIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNA  164 (278)
T ss_pred             CCCCEEEECCCCCCccccccccccc-ccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchh
Confidence            9999999999976432210000000 001112334568899999999999999999999999998887899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++++++++.++  .+|+||+
T Consensus       165 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~  201 (278)
T PRK08277        165 FTPL-------------------------------------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNA  201 (278)
T ss_pred             cCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            7653                                           456789999999999999999999  4899999


Q ss_pred             eecceeecCcccCC----------------------CCCChhhhccchhhhhhc-cCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA----------------------GRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~~~~  287 (290)
                      |+||++.|++.+..                      ...+|+|+|+.+++++++ .....+|+.+..++.
T Consensus       202 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG  271 (278)
T PRK08277        202 IAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG  271 (278)
T ss_pred             EEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence            99999999975321                      123799999999999998 677899999888775

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-36  Score=261.22  Aligned_cols=223  Identities=24%  Similarity=0.344  Sum_probs=186.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh-
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH-   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   81 (290)
                      +++|+++||||++|||+++|++|+++|++|++.+ |+.++.++..+++...+ .++..+.+|+++.+++.++++++.+. 
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcC-CceEEEecccCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999999875 55566666666665443 35778899999999999999988763 


Q ss_pred             ---cC--CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           82 ---FG--KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        82 ---~~--~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                         ++  ++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++  .++||+
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~  142 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIE----------------ETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIIN  142 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEE
Confidence               34  899999999975433322                2388999999999999999999999999974  489999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++...|++||+|+++++++++.|+  .
T Consensus       143 isS~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~  179 (252)
T PRK12747        143 ISSAATRISL-------------------------------------------PDFIAYSMTKGAINTMTFTLAKQLGAR  179 (252)
T ss_pred             ECCcccccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhHc
Confidence            9999887643                                           456789999999999999999998  5


Q ss_pred             CeEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          235 NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+||+|.|++....                 ...+|+++|+.++++++......+|+.+..++..
T Consensus       180 girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~vdgg~  250 (252)
T PRK12747        180 GITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGS  250 (252)
T ss_pred             CCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcCCcEEEecCCc
Confidence            89999999999999985421                 1248999999999999877778999999888753

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-36  Score=262.00  Aligned_cols=225  Identities=27%  Similarity=0.256  Sum_probs=192.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|++++.++..+++....+.++.++.+|+++++++++++++    +
T Consensus         4 ~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~   79 (259)
T PRK06125          4 HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A   79 (259)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h
Confidence            578999999999999999999999999999999999988888777777665555788999999999999888865    4


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.....+..                +.+.++|++++++|+.++++++++++|.|+++..++||++||..+
T Consensus        80 g~id~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~  143 (259)
T PRK06125         80 GDIDILVNNAGAIPGGGLD----------------DVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAG  143 (259)
T ss_pred             CCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccc
Confidence            7999999999986433332                338999999999999999999999999999877789999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+|+++++++++.|+  .+|+||+
T Consensus       144 ~~~~-------------------------------------------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~  180 (259)
T PRK06125        144 ENPD-------------------------------------------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVG  180 (259)
T ss_pred             cCCC-------------------------------------------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            6543                                           456789999999999999999998  4899999


Q ss_pred             eecceeecCcccC----------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCccccC
Q 039097          241 VCPGYVKTEMTYN----------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF  290 (290)
Q Consensus       241 v~PG~v~T~~~~~----------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~~  290 (290)
                      |+||+++|++...                      .   ...+|+|+|+.++++++......+|+.+..++...|
T Consensus       181 i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~vdgg~~~  255 (259)
T PRK06125        181 VNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPRSGYTSGTVVTVDGGISA  255 (259)
T ss_pred             EecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCchhccccCceEEecCCeee
Confidence            9999999995321                      0   134799999999999987777899999998886543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=261.77  Aligned_cols=222  Identities=19%  Similarity=0.156  Sum_probs=189.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||++|||+++|++|+++|++|++++|+++++++..+++....  ++.++++|++|.++++++++++.++++++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG--EVYAVKADLSDKDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            79999999999999999999999999999999888888777776433  5788999999999999999999999999999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc-cCCCCeEEEEcCCCCcccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ-LSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~-~~~~~~iV~isS~~g~~~~  166 (290)
                      ||||||.....+.              ...+.+.++|.+.+.+|+.+++.+++.++|.|. ++..|+||++||..+..+.
T Consensus        80 li~naG~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~  145 (259)
T PRK08340         80 LVWNAGNVRCEPC--------------MLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM  145 (259)
T ss_pred             EEECCCCCCCCcc--------------ccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC
Confidence            9999997532110              012337889999999999999999999999886 3456899999999876543


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|+++|+|+.+++|+++.++  .+|+||+|+||
T Consensus       146 -------------------------------------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG  182 (259)
T PRK08340        146 -------------------------------------------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLG  182 (259)
T ss_pred             -------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence                                                       456789999999999999999999  48999999999


Q ss_pred             eeecCcccC---------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          245 YVKTEMTYN---------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       245 ~v~T~~~~~---------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +++|++.+.                           .+..+|||+|+.++|++++...+.+|+.+..++..
T Consensus       183 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~  253 (259)
T PRK08340        183 SFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM  253 (259)
T ss_pred             cccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence            999997531                           01347899999999999988889999999888753

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=6.9e-36  Score=260.08  Aligned_cols=208  Identities=22%  Similarity=0.215  Sum_probs=180.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++++||||++|||+++|++|+ +|++|++++|+.+++++..+++++.+...+.+++||++|.++++++++++.+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 6999999999999898888888766555688899999999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~~~  165 (290)
                      ++|||||.....+..                +.+.+.+.+++++|+.+++.+++.++|.|.++. .|+||++||..+..+
T Consensus        80 ~lv~nag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~  143 (246)
T PRK05599         80 LAVVAFGILGDQERA----------------ETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA  143 (246)
T ss_pred             EEEEecCcCCCchhh----------------hcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC
Confidence            999999986433221                125677889999999999999999999998664 689999999988765


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|++||+|+.+++++++.|+  .+|+||+|+|
T Consensus       144 ~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~P  180 (246)
T PRK05599        144 R-------------------------------------------RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARP  180 (246)
T ss_pred             C-------------------------------------------cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecC
Confidence            3                                           456789999999999999999998  5899999999


Q ss_pred             ceeecCcccCCC----CCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYNAG----RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~~~----~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+++|++.....    ..+||++|+.+++++....
T Consensus       181 G~v~T~~~~~~~~~~~~~~pe~~a~~~~~~~~~~~  215 (246)
T PRK05599        181 GFVIGSMTTGMKPAPMSVYPRDVAAAVVSAITSSK  215 (246)
T ss_pred             CcccchhhcCCCCCCCCCCHHHHHHHHHHHHhcCC
Confidence            999999865532    2589999999999988654

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-36  Score=260.37  Aligned_cols=220  Identities=28%  Similarity=0.318  Sum_probs=189.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.++      .   ..+..+.++++|+++.++++++++++.+
T Consensus         1 ~~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          1 NLDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------T---VDGRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------h---hcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            678999999999999999999999999999999999998654      1   1124588899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS  159 (290)
                      .++++|++|||||.....+..                +.+.++|++++++|+.+++.+++.+.+.|.++ ..++||++||
T Consensus        72 ~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  135 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPYALAA----------------EASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGS  135 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc
Confidence            999999999999976433322                23789999999999999999999999999865 4589999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~v  238 (290)
                      ..+..+.                                           ++...|+++|+++++++++++.|+ +.|+|
T Consensus       136 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v  172 (252)
T PRK07856        136 VSGRRPS-------------------------------------------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRV  172 (252)
T ss_pred             cccCCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCeEE
Confidence            9876643                                           456889999999999999999998 56999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++....                 ...+|+++|+.++++++......+|+.+..++..
T Consensus       173 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdgg~  239 (252)
T PRK07856        173 NAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLEVHGGG  239 (252)
T ss_pred             EEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            9999999999975421                 1357999999999999887788999999988764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=260.34  Aligned_cols=225  Identities=25%  Similarity=0.236  Sum_probs=194.1

Q ss_pred             cCCCcEEEEecCCC-chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANK-GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~-gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+++|+++||||+| |||++++++|+++|++|++++|+.+++++..++++... ..++.++++|+++.++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35689999999985 99999999999999999999999888887777776533 34688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      +++++|++|||||.....+..                +.+.++|++.+++|+.+++.+++.++|+|++.. .++||++||
T Consensus        94 ~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss  157 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVV----------------DMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNAS  157 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence            999999999999975443332                237899999999999999999999999998776 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+++|+|+++++++++.|+  .+|+
T Consensus       158 ~~~~~~~-------------------------------------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~  194 (262)
T PRK07831        158 VLGWRAQ-------------------------------------------HGQAHYAAAKAGVMALTRCSALEAAEYGVR  194 (262)
T ss_pred             hhhcCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhCccCeE
Confidence            8776543                                           456789999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          238 INCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ||+|+||++.|++....                ...+|+++|+.++++++......+|+.+..+.
T Consensus       195 v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~itG~~i~v~~  259 (262)
T PRK07831        195 INAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLTGEVVSVSS  259 (262)
T ss_pred             EEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCceEEeCC
Confidence            99999999999975431                13479999999999999888899999988765

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.2e-35  Score=263.01  Aligned_cols=227  Identities=27%  Similarity=0.308  Sum_probs=191.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++..  ..++.++++|++|.++++++++.+.+.
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG--EPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC--CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            357799999999999999999999999999999999987766666655532  246889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||.......              ...+.+.++|++++++|+.+++++++++.+.|.+...|+||++||..
T Consensus        92 ~g~id~li~~Ag~~~~~~~--------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~  157 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCP--------------DIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVA  157 (280)
T ss_pred             hCCCCEEEECCCcCCCCCC--------------CcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChh
Confidence            9999999999997542110              11234889999999999999999999999999877778999999988


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       158 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  194 (280)
T PLN02253        158 SAIGG-------------------------------------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVN  194 (280)
T ss_pred             hcccC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            76543                                           344689999999999999999998  589999


Q ss_pred             EeecceeecCcccC--------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN--------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~--------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++||++.|++...                          ....+|+|+++.++++++......+|+.+..++.
T Consensus       195 ~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        195 CVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEARYISGLNLMIDGG  268 (280)
T ss_pred             EEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcccccccCcEEEECCc
Confidence            99999999986321                          0125799999999999988778889999888775

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=259.78  Aligned_cols=227  Identities=27%  Similarity=0.326  Sum_probs=196.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||+++||+++|++|+++|++|++++|++++.++..+++...+ .++.++.+|+++.++++++++++.+.
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQG-LSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999888777777775543 45888999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.++|++++++|+.+++++++.+.+.|++++.++||++||..
T Consensus        85 ~~~~d~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~  148 (255)
T PRK07523         85 IGPIDILVNNAGMQFRTPLE----------------DFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQ  148 (255)
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccch
Confidence            99999999999986544332                23889999999999999999999999999887789999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.++++++.++  .+|+||
T Consensus       149 ~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~  185 (255)
T PRK07523        149 SALAR-------------------------------------------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCN  185 (255)
T ss_pred             hccCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEE
Confidence            65543                                           456889999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++.+..                 ....|+|+|+.+++++.......+|+.+..++..
T Consensus       186 ~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  251 (255)
T PRK07523        186 AIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVDGGI  251 (255)
T ss_pred             EEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCCe
Confidence            999999999985421                 1236899999999999877778899988877654

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=260.30  Aligned_cols=226  Identities=23%  Similarity=0.296  Sum_probs=196.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||+++||+++|++|+++|++|++++|+++++++..+.+...+ .++.+++||+++.++++++++++.+.+
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELG-IEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999999999999888877777765443 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||.....+..+                .+.++|++++++|+.+++.+++.++|+|++.+.++||++||..+
T Consensus        86 ~~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  149 (265)
T PRK07097         86 GVIDILVNNAGIIKRIPMLE----------------MSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMS  149 (265)
T ss_pred             CCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccc
Confidence            99999999999875544332                38899999999999999999999999998887899999999887


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.++++++.++  .+|+||+
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~  186 (265)
T PRK07097        150 ELGR-------------------------------------------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNG  186 (265)
T ss_pred             cCCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEE
Confidence            6543                                           456789999999999999999999  4899999


Q ss_pred             eecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++....                       ...+|+++|+.+++++.......+|+.+..++..
T Consensus       187 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~  257 (265)
T PRK07097        187 IGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASNFVNGHILYVDGGI  257 (265)
T ss_pred             EEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence            99999999975321                       1236899999999999988788899998887754

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=2e-35  Score=258.12  Aligned_cols=226  Identities=25%  Similarity=0.345  Sum_probs=194.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|++|||||++|||++++++|+++|++|++++|+.+..++...++...+ .++.++++|++++++++++++++.+.+++
T Consensus         1 ~~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          1 MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDG-GKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            37899999999999999999999999999999999887777777765443 45888999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGK  163 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~  163 (290)
                      +|++|||||+....+..                +.+.++|++++++|+.+++.+++.+++.|++.+ .++||++||..+.
T Consensus        80 id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  143 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIE----------------TITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV  143 (256)
T ss_pred             CCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc
Confidence            99999999986433332                237899999999999999999999999997654 4799999999876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|+++|++++.++++++.++  .||+||+|
T Consensus       144 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i  180 (256)
T PRK08643        144 VGN-------------------------------------------PELAVYSSTKFAVRGLTQTAARDLASEGITVNAY  180 (256)
T ss_pred             cCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            653                                           456789999999999999999998  48999999


Q ss_pred             ecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccccC
Q 039097          242 CPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF  290 (290)
Q Consensus       242 ~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~~  290 (290)
                      +||++.|++....                          ...+||++|+.+.++++......+|+.+..++...|
T Consensus       181 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        181 APGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             eeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEeCCCeec
Confidence            9999999975421                          124789999999999998888899999999887543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-35  Score=259.46  Aligned_cols=221  Identities=25%  Similarity=0.349  Sum_probs=185.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.   .+++...   .+.++.+|++++++++++++++.+.+
T Consensus         4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~   77 (255)
T PRK06463          4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK---GVFTIKCDVGNRDQVKKSKEVVEKEF   77 (255)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC---CCeEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999887765432   2233322   37789999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.+++.+++.++|.|++++.++||++||..+
T Consensus        78 ~~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~  141 (255)
T PRK06463         78 GRVDVLVNNAGIMYLMPFE----------------EFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAG  141 (255)
T ss_pred             CCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHh
Confidence            9999999999986433322                237899999999999999999999999998777899999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ....                                          +++...|++||+|+++++++++.|+  .+|+||+
T Consensus       142 ~~~~------------------------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~  179 (255)
T PRK06463        142 IGTA------------------------------------------AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNA  179 (255)
T ss_pred             CCCC------------------------------------------CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            5321                                          1345789999999999999999998  4899999


Q ss_pred             eecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++....                    ...+|+++|+.++++++......+|+.+..++.
T Consensus       180 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        180 VAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             EeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            99999999985321                    124799999999999988877889999887764

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=261.92  Aligned_cols=213  Identities=25%  Similarity=0.299  Sum_probs=184.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..+++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|.+++.++++++.+
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~   79 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEG-FDVHGVMCDVRHREEVTHLADEAFR   79 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999888887777776443 3588899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      .++++|+||||||+....+..+                .+.++|++++++|+.+++.+++.++|.|.+++ +|+||++||
T Consensus        80 ~~g~id~li~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS  143 (275)
T PRK05876         80 LLGHVDVVFSNAGIVVGGPIVE----------------MTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS  143 (275)
T ss_pred             HcCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            9999999999999865444332                38899999999999999999999999997665 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+++.+++++|+.|+  .+|+
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~  180 (275)
T PRK05876        144 FAGLVPN-------------------------------------------AGLGAYGVAKYGVVGLAETLAREVTADGIG  180 (275)
T ss_pred             hhhccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            9877643                                           456889999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhcc
Q 039097          238 INCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~  273 (290)
                      |++|+||++.|++..+.                        ..++|+++|+.++..+...
T Consensus       181 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~  240 (275)
T PRK05876        181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN  240 (275)
T ss_pred             EEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC
Confidence            99999999999985431                        1368899999888776544

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-35  Score=263.96  Aligned_cols=227  Identities=27%  Similarity=0.270  Sum_probs=189.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |..+++|++|||||++|||+++|++|+++|++|+++.++.+  ..++..+.+... +.++.++.||+++.++++++++++
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~  128 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVALPGDLKDEAFCRQLVERA  128 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc-CCeEEEEecCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999887643  234444455443 346888999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .+.++++|+||||||........               .+.+.++|++++++|+.+++++++.++|+|++  +++||++|
T Consensus       129 ~~~~g~iD~lV~nAg~~~~~~~~---------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~s  191 (300)
T PRK06128        129 VKELGGLDILVNIAGKQTAVKDI---------------ADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTG  191 (300)
T ss_pred             HHHhCCCCEEEECCcccCCCCCh---------------hhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEEC
Confidence            99999999999999975322211               23388999999999999999999999999874  47999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++|+++|+.++  .+|
T Consensus       192 S~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~el~~~gI  228 (300)
T PRK06128        192 SIQSYQPS-------------------------------------------PTLLDYASTKAAIVAFTKALAKQVAEKGI  228 (300)
T ss_pred             CccccCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCc
Confidence            99876543                                           456789999999999999999998  589


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||+++|++....                 ....|+|++..++++++......+|+.+..++..
T Consensus       229 ~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        229 RVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             EEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCcEEeeCCCE
Confidence            999999999999985321                 1247899999999999887778899999888753

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=257.02  Aligned_cols=223  Identities=24%  Similarity=0.293  Sum_probs=188.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||.++|++|+++|++|++++|+..  .+..+.+... +.++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEF   78 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999752  3333444332 2458899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~  161 (290)
                      +++|++|||||.....+..                +.+.++|++++++|+.+++.++++++++|.++. .++||++||..
T Consensus        79 ~~~d~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  142 (248)
T TIGR01832        79 GHIDILVNNAGIIRRADAE----------------EFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASML  142 (248)
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHH
Confidence            9999999999987543332                237899999999999999999999999997665 68999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           +....|+++|+++++++++++.++  .+|+||
T Consensus       143 ~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  179 (248)
T TIGR01832       143 SFQGG-------------------------------------------IRVPSYTASKHGVAGLTKLLANEWAAKGINVN  179 (248)
T ss_pred             hccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEE
Confidence            66543                                           345789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++.+..                 ...+|+++|+.++++++......+|+++..++.
T Consensus       180 ~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~i~~dgg  244 (248)
T TIGR01832       180 AIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLAVDGG  244 (248)
T ss_pred             EEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcEEEeCCC
Confidence            999999999985421                 235799999999999998778889999988875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-35  Score=260.26  Aligned_cols=226  Identities=23%  Similarity=0.271  Sum_probs=190.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-------HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-------GLEAVEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+.+.       +++..+++... +.++.++.+|+++.+++.+
T Consensus         1 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          1 MMSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-GGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-CCceEEEEecCCCHHHHHH
Confidence            778999999999999999999999999999999999998653       33444455443 3468899999999999999


Q ss_pred             HHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCe
Q 039097           74 VADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSAR  153 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~  153 (290)
                      +++++.+.++++|++|||||.....+..                +.+.++|++++++|+.+++.++++++|+|+++++++
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~  143 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTE----------------DTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPH  143 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcc----------------cCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCE
Confidence            9999999999999999999986544333                238899999999999999999999999999887789


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                         +.++...|++||+|++.++++++.|+
T Consensus       144 iv~iss~~~~~~~-----------------------------------------~~~~~~~Y~~sK~a~~~~~~~la~el  182 (273)
T PRK08278        144 ILTLSPPLNLDPK-----------------------------------------WFAPHTAYTMAKYGMSLCTLGLAEEF  182 (273)
T ss_pred             EEEECCchhcccc-----------------------------------------ccCCcchhHHHHHHHHHHHHHHHHHh
Confidence            9999997654321                                         01345789999999999999999999


Q ss_pred             --CCeEEEEeecc-eeecCcccCC--------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          234 --PNFCINCVCPG-YVKTEMTYNA--------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       234 --~~i~vn~v~PG-~v~T~~~~~~--------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                        .+|+||+|+|| ++.|++.+..        ...+|+++|+.+++++.......+|+++.+
T Consensus       183 ~~~~I~v~~i~Pg~~i~t~~~~~~~~~~~~~~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~  244 (273)
T PRK08278        183 RDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTPEIMADAAYEILSRPAREFTGNFLID  244 (273)
T ss_pred             hhcCcEEEEEeCCCccccHHHHhcccccccccccCCHHHHHHHHHHHhcCccccceeEEEec
Confidence              48999999999 6889864432        246999999999999998888899998853

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.7e-35  Score=259.63  Aligned_cols=225  Identities=21%  Similarity=0.224  Sum_probs=183.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.+.+++..    ...+.++.++.+|+++.+++.++++++.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELE----AAHGDAVVGVEGDVRSLDDHKEAVARCVAAF   77 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hhcCCceEEEEeccCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999876554433    2223468889999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+||||||+... .+..+.            ..+...++|++++++|+.+++.++++++|+|++.. ++||+++|..
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~------------~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~  144 (262)
T TIGR03325        78 GKIDCLIPNAGIWDYSTALVDI------------PDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNA  144 (262)
T ss_pred             CCCCEEEECCCCCccCCccccC------------CchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccc
Confidence            999999999997532 111111            00112368999999999999999999999997654 7999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~  240 (290)
                      +..+.                                           ++...|++||+|+++|+++++.++ +.|+||+
T Consensus       145 ~~~~~-------------------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~  181 (262)
T TIGR03325       145 GFYPN-------------------------------------------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNG  181 (262)
T ss_pred             eecCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEE
Confidence            76543                                           345789999999999999999998 5699999


Q ss_pred             eecceeecCcccCC-------------------------CCCChhhhccchhhhhhccC-CCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLALLHK-GGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~~~  287 (290)
                      |+||++.|+|....                         +..+|+|+|+.+++++++.. ...+|+.+..++.
T Consensus       182 i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg  254 (262)
T TIGR03325       182 VAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG  254 (262)
T ss_pred             EecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence            99999999974310                         12478999999999998753 5689999988765

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=2.9e-35  Score=262.69  Aligned_cols=225  Identities=22%  Similarity=0.201  Sum_probs=187.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ..+++|++|||||++|||+++|++|+++|++|++.+|+..  ..++..+.+... +.++.++.+|+++.+++.++++++.
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC-GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc-CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999887532  333443333332 3468889999999999999999999


Q ss_pred             hhcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      +.++++|++|||||.... .+.                .+.+.++|++++++|+.+++.++++++|+|++  .++||++|
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iS  185 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDI----------------ADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTS  185 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCCh----------------hhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEEC
Confidence            999999999999997432 121                23388999999999999999999999999864  48999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|+++|+|+++++++++.|+  .+|
T Consensus       186 S~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~el~~~gI  222 (294)
T PRK07985        186 SIQAYQPS-------------------------------------------PHLLDYAATKAAILNYSRGLAKQVAEKGI  222 (294)
T ss_pred             CchhccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhHhCc
Confidence            99876543                                           456789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||+++|++....                 ...+|||+|+.++++++......+|+.+..++..
T Consensus       223 rvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~i~vdgG~  291 (294)
T PRK07985        223 RVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGE  291 (294)
T ss_pred             EEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccEEeeCCCe
Confidence            999999999999974210                 1358999999999999988888999999888753

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.3e-35  Score=256.98  Aligned_cols=228  Identities=27%  Similarity=0.302  Sum_probs=196.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999888877777776542 3468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|++|||||.....+..                +.+.++|++.+++|+.+++.++++++|+|++++.++||++||
T Consensus        84 ~~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS  147 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRKAAI----------------DYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGS  147 (257)
T ss_pred             HHcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECc
Confidence            9999999999999975433322                238899999999999999999999999998877799999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+++|++++.++++++.++  .+++
T Consensus       148 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~  184 (257)
T PRK09242        148 VSGLTHV-------------------------------------------RSGAPYGMTKAALLQMTRNLAVEWAEDGIR  184 (257)
T ss_pred             cccCCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHhCeE
Confidence            9877654                                           456789999999999999999998  5899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||++.|++....                 ...+||+++..+.++++......+|+.+..++.
T Consensus       185 v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  251 (257)
T PRK09242        185 VNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQCIAVDGG  251 (257)
T ss_pred             EEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            99999999999986532                 123789999999999987666778888877664

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4.8e-35  Score=255.74  Aligned_cols=224  Identities=22%  Similarity=0.307  Sum_probs=193.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...+ .++.++.+|+++.++++++++.+.+.+
T Consensus         8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999999887777777765443 458889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.....+.                 +.+.++|++.+++|+.+++++++++.|+|.+.+.++||++||..+
T Consensus        87 ~~~d~li~~ag~~~~~~~-----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  149 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPF-----------------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA  149 (255)
T ss_pred             CCCCEEEECCCCCCCCCC-----------------CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc
Confidence            999999999998643221                 237899999999999999999999999998777789999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+|+++++++++.++  .+|+||+
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~  186 (255)
T PRK06113        150 ENKN-------------------------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNG  186 (255)
T ss_pred             cCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            6543                                           456789999999999999999998  4899999


Q ss_pred             eecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++....                ...+|+|+++.+++++.......+|+.+..++.
T Consensus       187 v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        187 IAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             EecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            99999999975532                124889999999999987777889999988775

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=264.22  Aligned_cols=217  Identities=27%  Similarity=0.290  Sum_probs=185.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++..  +.++..+.||++|.++++++++++.+
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999998887777766642  23577788999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||+....+..                +.+.++|++++++|+.+++++++.++|+|.+. .|+||++||.
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~----------------~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~  144 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVA----------------QVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSL  144 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCH
Confidence            999999999999986543333                23889999999999999999999999999765 4899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+++++++++++.|+  .+|+|
T Consensus       145 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v  181 (296)
T PRK05872        145 AAFAAA-------------------------------------------PGMAAYCASKAGVEAFANALRLEVAHHGVTV  181 (296)
T ss_pred             hhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEE
Confidence            887654                                           456899999999999999999998  58999


Q ss_pred             EEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCce
Q 039097          239 NCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSG  279 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g  279 (290)
                      |+++||+++|++.+..                   ...+||++++.+++++........+
T Consensus       182 ~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~  241 (296)
T PRK05872        182 GSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYA  241 (296)
T ss_pred             EEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence            9999999999986531                   1358999999999998866644433

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-35  Score=264.73  Aligned_cols=235  Identities=24%  Similarity=0.322  Sum_probs=189.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++.||++|.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999998888888886544 3368899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|+||||||+..... .                +.+.++++.++++|+.+++++++.++|.|++. .++||++||
T Consensus        89 ~~~~~iD~li~nAG~~~~~~-~----------------~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS  150 (313)
T PRK05854         89 AEGRPIHLLINNAGVMTPPE-R----------------QTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSS  150 (313)
T ss_pred             HhCCCccEEEECCccccCCc-c----------------ccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEec
Confidence            99999999999999864311 1                12778999999999999999999999999865 589999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CC
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PN  235 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~  235 (290)
                      ..+..+.....                             +... ... .++...|+.||+|+.++++.|+.++    .+
T Consensus       151 ~~~~~~~~~~~-----------------------------~~~~-~~~-~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~g  199 (313)
T PRK05854        151 IAARRGAINWD-----------------------------DLNW-ERS-YAGMRAYSQSKIAVGLFALELDRRSRAAGWG  199 (313)
T ss_pred             hhhcCCCcCcc-----------------------------cccc-ccc-CcchhhhHHHHHHHHHHHHHHHHHhhcCCCC
Confidence            87755321100                             0000 000 1345789999999999999999864    37


Q ss_pred             eEEEEeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          236 FCINCVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      |+||+++||+|.|++....                       ...++++++...++.+..+.. .+|.||..+
T Consensus       200 I~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ga~~~l~~a~~~~~-~~g~~~~~~  271 (313)
T PRK05854        200 ITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVESAILPALYAATSPDA-EGGAFYGPR  271 (313)
T ss_pred             eEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHHHHHHHhhheeeCCCC-CCCcEECCC
Confidence            9999999999999986321                       023778888888888887764 358888765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-35  Score=255.67  Aligned_cols=224  Identities=22%  Similarity=0.256  Sum_probs=192.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+.+++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++.    .++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          1 MMRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----PAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----CceEEEEccCCCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999877666555442    3588899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      +++++|++|||||.....+..+                .+.++|++++++|+.+++.+++++.+.|.++. +++||++||
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  140 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILD----------------ISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMAS  140 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            9999999999999865444332                37899999999999999999999999987653 479999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||++++.++++++.++  .+|+
T Consensus       141 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~  177 (257)
T PRK07067        141 QAGRRGE-------------------------------------------ALVSHYCATKAAVISYTQSAALALIRHGIN  177 (257)
T ss_pred             HHhCCCC-------------------------------------------CCCchhhhhHHHHHHHHHHHHHHhcccCeE
Confidence            8766543                                           456889999999999999999998  5899


Q ss_pred             EEEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|.||+++|++++..                          ...+|+|+|+.++++++......+|+.+..++.
T Consensus       178 v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        178 VNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             EEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            99999999999974321                          123799999999999998877888998888764

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-35  Score=256.36  Aligned_cols=228  Identities=28%  Similarity=0.362  Sum_probs=191.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||++|||+++|++|+++|++|++++|+.. ..+..+++...+ .++.++.+|+++.++++++++++.+
T Consensus         1 ~~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~   78 (263)
T PRK08226          1 MGKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRG-HRCTAVVADVRDPASVAAAIKRAKE   78 (263)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999864 344444554332 4578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||.....+..                +.+.+++++.+++|+.+++.+++.++|+|++...++||++||.
T Consensus        79 ~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  142 (263)
T PRK08226         79 KEGRIDILVNNAGVCRLGSFL----------------DMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSV  142 (263)
T ss_pred             HcCCCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcH
Confidence            999999999999986543332                2378999999999999999999999999987777899999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+....                                          .++...|+++|+++++++++++.++  .+++|
T Consensus       143 ~~~~~~------------------------------------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v  180 (263)
T PRK08226        143 TGDMVA------------------------------------------DPGETAYALTKAAIVGLTKSLAVEYAQSGIRV  180 (263)
T ss_pred             HhcccC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            663211                                          0345789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++.+..                       ...+|+++|+.++++++......+|+.+..++..
T Consensus       181 ~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~dgg~  253 (263)
T PRK08226        181 NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESSYLTGTQNVIDGGS  253 (263)
T ss_pred             EEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchhcCCcCceEeECCCc
Confidence            9999999999975421                       1248999999999999877778999998888753

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=7.5e-35  Score=251.58  Aligned_cols=217  Identities=19%  Similarity=0.182  Sum_probs=181.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|++|||||++|||+++|++|+++|++|++++|++++..+   .+...   .+.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQA---GAQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHHc---CCEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            36899999999999999999999999999999998765433   33222   2678899999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEEEEcCCCC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNVSSSLG  162 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV~isS~~g  162 (290)
                      +|++|||||........                +.+.++|++++++|+.+++.+++.++|.|++..  .++||++||..+
T Consensus        75 id~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~  138 (236)
T PRK06483         75 LRAIIHNASDWLAEKPG----------------APLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV  138 (236)
T ss_pred             ccEEEECCccccCCCcC----------------ccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh
Confidence            99999999975433222                237899999999999999999999999998765  579999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v  241 (290)
                      ..+.                                           ++...|++||+++++++++++.|+ ++||||+|
T Consensus       139 ~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v  175 (236)
T PRK06483        139 EKGS-------------------------------------------DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSI  175 (236)
T ss_pred             ccCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence            5543                                           456789999999999999999999 67999999


Q ss_pred             ecceeecCcccCC-------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          242 CPGYVKTEMTYNA-------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       242 ~PG~v~T~~~~~~-------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||++.|+.....             ....|||+++.+.++++  ....+|+.+..++..
T Consensus       176 ~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~vdgg~  233 (236)
T PRK06483        176 APALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPVDGGR  233 (236)
T ss_pred             ccCceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEeCccc
Confidence            9999988643210             13489999999999996  457899999888753

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.5e-35  Score=262.59  Aligned_cols=239  Identities=34%  Similarity=0.444  Sum_probs=198.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++.+++++||||++|||+++|+.|+.+|++|++.+|+.++.+++++++... ...++.++++|++|.++|+++++++.+
T Consensus        31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~  110 (314)
T KOG1208|consen   31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKK  110 (314)
T ss_pred             ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            3578999999999999999999999999999999999999999999999873 445789999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||++.+..  .                .+.|+++..|++|++|+|+|++.++|.|+.+..+|||++||.
T Consensus       111 ~~~~ldvLInNAGV~~~~~--~----------------~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~  172 (314)
T KOG1208|consen  111 KEGPLDVLINNAGVMAPPF--S----------------LTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI  172 (314)
T ss_pred             cCCCccEEEeCcccccCCc--c----------------cCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence            9999999999999987554  1                277899999999999999999999999998877999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC-CeEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP-NFCIN  239 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~i~vn  239 (290)
                      .+ .....               ..+++..              .........+|+.||.|+..+++.|+++++ +|.++
T Consensus       173 ~~-~~~~~---------------~~~l~~~--------------~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~  222 (314)
T KOG1208|consen  173 LG-GGKID---------------LKDLSGE--------------KAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTY  222 (314)
T ss_pred             cc-cCccc---------------hhhccch--------------hccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEE
Confidence            87 11000               0000000              000002234799999999999999999995 99999


Q ss_pred             EeecceeecC-cccCCC-------------CCChhhhccchhhhhhccC-CCCceeEeecCccc
Q 039097          240 CVCPGYVKTE-MTYNAG-------------RLTVEEGAESPVWLALLHK-GGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~-~~~~~~-------------~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~~~~  288 (290)
                      +++||.+.|+ +.+...             .-++++.|+..++.+..|+ +..+|.++.++...
T Consensus       223 ~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga~t~~~~a~~p~~~~~sg~y~~d~~~~  286 (314)
T KOG1208|consen  223 SVHPGVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGAATTCYAALSPELEGVSGKYFEDCAIA  286 (314)
T ss_pred             EECCCcccccceecchHHHHHHHHHHHHHhccCHHHHhhheehhccCccccCcccccccccccc
Confidence            9999999999 555111             1278999999999999997 56899998877654

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=254.58  Aligned_cols=225  Identities=23%  Similarity=0.300  Sum_probs=191.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+. +......+++... +.++.++.+|+++.+++.++++++.+.
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA-GGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999988854 3445555566543 346888999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~  160 (290)
                      ++++|++|||||.....+..                +.+.++|++.+++|+.+++.+++.++++|++.. .++||++||.
T Consensus        83 ~g~id~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~  146 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSH----------------EMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSV  146 (261)
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Confidence            99999999999976543332                238899999999999999999999999998764 5899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|+|+.+++++++.++  .+|+|
T Consensus       147 ~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v  183 (261)
T PRK08936        147 HEQIPW-------------------------------------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRV  183 (261)
T ss_pred             cccCCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            766543                                           456789999999999999999998  58999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++....                 ...+|+++++.++++++......+|..+..++.
T Consensus       184 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d~g  249 (261)
T PRK08936        184 NNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_pred             EEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccCcEEEECCC
Confidence            9999999999985421                 124789999999999998888899998877764

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-35  Score=251.23  Aligned_cols=217  Identities=20%  Similarity=0.159  Sum_probs=181.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++||||++|||+++|++|+++|++|++++|+.+++++..++++..+ .++..+.+|+++.++++++++++.++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALT-DNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999998888888776554 35788899999999999999999999


Q ss_pred             cC-CccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEc
Q 039097           82 FG-KLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVS  158 (290)
Q Consensus        82 ~~-~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~is  158 (290)
                      ++ ++|++|||||.... .+.                .+.+.++|.+.+++|+.+++.+++.++|+|++++ +|+||++|
T Consensus        80 ~g~~iD~li~nag~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~is  143 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLF----------------DEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVI  143 (227)
T ss_pred             hCCCCCEEEECCccCCCCCcc----------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEe
Confidence            99 99999999986432 222                2337899999999999999999999999998654 68999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+.                                              ++...|+++|+|+.+|+++|+.|+  .+|
T Consensus       144 S~~~~----------------------------------------------~~~~~Y~asKaal~~~~~~la~el~~~~I  177 (227)
T PRK08862        144 SHDDH----------------------------------------------QDLTGVESSNALVSGFTHSWAKELTPFNI  177 (227)
T ss_pred             cCCCC----------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCc
Confidence            97543                                              234689999999999999999998  489


Q ss_pred             EEEEeecceeecCcccC---CCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          237 CINCVCPGYVKTEMTYN---AGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~---~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      |||+|+||++.|+....   +... .|+++....+++.  ....+|+.+..
T Consensus       178 rvn~v~PG~i~t~~~~~~~~~~~~-~~~~~~~~~~l~~--~~~~tg~~~~~  225 (227)
T PRK08862        178 RVGGVVPSIFSANGELDAVHWAEI-QDELIRNTEYIVA--NEYFSGRVVEA  225 (227)
T ss_pred             EEEEEecCcCcCCCccCHHHHHHH-HHHHHhheeEEEe--cccccceEEee
Confidence            99999999999984221   1111 2788888888886  44688877653

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=250.20  Aligned_cols=224  Identities=26%  Similarity=0.308  Sum_probs=192.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC--HHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD--PAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~   78 (290)
                      |.+|++|+++||||+||||+++++.|+++|++|++++|+++..++..+++.......+.++.+|+++  .+++.++++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            7889999999999999999999999999999999999999888777777765554467788999986  57899999999


Q ss_pred             Hhhc-CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           79 RSHF-GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        79 ~~~~-~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      .+.+ +++|++|||||.... .+.                .+.+.++|.+.+++|+.+++.+++.++|.|.+.+.++||+
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~  144 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPL----------------DFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIF  144 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCc----------------cccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence            9888 789999999997532 222                2338899999999999999999999999998777789999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC---
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---  233 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~---  233 (290)
                      +||..+..+.                                           ++...|++||++++.++++++.|+   
T Consensus       145 ~ss~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~  181 (239)
T PRK08703        145 VGESHGETPK-------------------------------------------AYWGGFGASKAALNYLCKVAADEWERF  181 (239)
T ss_pred             EeccccccCC-------------------------------------------CCccchHHhHHHHHHHHHHHHHHhccC
Confidence            9998776543                                           455789999999999999999998   


Q ss_pred             CCeEEEEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEee
Q 039097          234 PNFCINCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      ++++||.|.||+++|++....       ...++++++..+++++++.....+|+++.
T Consensus       182 ~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  238 (239)
T PRK08703        182 GNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVLPAFVWWASAESKGRSGEIVY  238 (239)
T ss_pred             CCeEEEEEecCcccCccccccCCCCCccccCCHHHHHHHHHHHhCccccCcCCeEee
Confidence            269999999999999985432       13577899999999999888899999875

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=253.46  Aligned_cols=226  Identities=26%  Similarity=0.332  Sum_probs=196.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|+++||||+++||+++|++|+++|++|++++|+++.+++..++++..+ .++.++.||+++++++.++++++...
T Consensus         7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAG-GAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999887777777776543 35889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.++|++.+++|+.+++.+++.+++.|.+.+.++||++||..
T Consensus        86 ~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~  149 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLA----------------ELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA  149 (256)
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeech
Confidence            99999999999976443332                23789999999999999999999999999887789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.+++.++.|+  .+++||
T Consensus       150 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  186 (256)
T PRK06124        150 GQVAR-------------------------------------------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSN  186 (256)
T ss_pred             hccCC-------------------------------------------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence            76653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                 ...+|+++++.+++++.......+|+++..++.
T Consensus       187 ~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~i~~dgg  251 (256)
T PRK06124        187 AIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAASYVNGHVLAVDGG  251 (256)
T ss_pred             EEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCcCCCEEEECCC
Confidence            999999999974432                 135799999999999998888899999988764

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=252.81  Aligned_cols=222  Identities=26%  Similarity=0.299  Sum_probs=185.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|++. ..+..+++...+ .++.++.+|+++.+++.++++++.+.+
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAG-GEALALTADLETYAGAQAAMAAAVEAF   82 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcC-CeEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999853 445555554433 358889999999999999999999999


Q ss_pred             CCccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|++|||||... ..+..                +.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..
T Consensus        83 ~~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~  146 (260)
T PRK12823         83 GRIDVLINNVGGTIWAKPFE----------------EYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIA  146 (260)
T ss_pred             CCCeEEEECCccccCCCChh----------------hCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcc
Confidence            99999999999642 12222                23889999999999999999999999999887778999999986


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..                                             .+...|++||+|++.++++++.++  .+|+||
T Consensus       147 ~~~---------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  181 (260)
T PRK12823        147 TRG---------------------------------------------INRVPYSAAKGGVNALTASLAFEYAEHGIRVN  181 (260)
T ss_pred             ccC---------------------------------------------CCCCccHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            532                                             123579999999999999999998  489999


Q ss_pred             EeecceeecCcccC----------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN----------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~----------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++...                            .....|||+++.++++++......+|+.+..++.
T Consensus       182 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        182 AVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             EEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            99999999985210                            0123789999999999987777789988887664

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=252.27  Aligned_cols=223  Identities=27%  Similarity=0.314  Sum_probs=190.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||+++||+++|++|+++|++|++++|+... .+..+++.   ...+.++.+|+++.+++.++++++.+.
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   86 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL---GGNAKGLVCDVSDSQSVEAAVAAVISA   86 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998653 22233332   235778999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.+++++++++|+.+++++++.+.|.|++++.++||++||..
T Consensus        87 ~~~~d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~  150 (255)
T PRK06841         87 FGRIDILVNSAGVALLAPAE----------------DVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQA  150 (255)
T ss_pred             hCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchh
Confidence            99999999999986433322                23789999999999999999999999999887789999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.++++++.++  .+++||
T Consensus       151 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  187 (255)
T PRK06841        151 GVVAL-------------------------------------------ERHVAYCASKAGVVGMTKVLALEWGPYGITVN  187 (255)
T ss_pred             hccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence            76544                                           456789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                ...+|+++++.+++++.......+|+.+..++.
T Consensus       188 ~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dgg  251 (255)
T PRK06841        188 AISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGENLVIDGG  251 (255)
T ss_pred             EEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            999999999975421                135899999999999998888899999988875

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-35  Score=263.72  Aligned_cols=224  Identities=15%  Similarity=0.176  Sum_probs=172.6

Q ss_pred             CcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH---------hcCCC-----cEEEEEeeC
Q 039097            2 AETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK---------HSGFD-----NVIFHQLDV   65 (290)
Q Consensus         2 ~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~---------~~~~~-----~~~~~~~Dl   65 (290)
                      .+++||++|||||+  +|||+++|++|+++|++|++.++.+ .++...+...         ...+.     ++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            46889999999996  9999999999999999999987642 1111100000         00000     011122333


Q ss_pred             CCH------------------HHHHHHHHHHHhhcCCccEEEEccccCC--CCCCCCcccchhhhcccccccccChHHHH
Q 039097           66 ADP------------------AAIHSVADFIRSHFGKLDILVNNAGITG--ISSDADTLSGFIEEGVARGKMTQTYESAE  125 (290)
Q Consensus        66 ~~~------------------~~v~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (290)
                      ++.                  ++++++++++.+++|++|+||||||...  ..+.                .+.+.++|+
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~----------------~~~~~e~~~  146 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPL----------------LETSRKGYL  146 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCCh----------------hhCCHHHHH
Confidence            332                  4689999999999999999999999643  1222                234899999


Q ss_pred             HhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCC
Q 039097          126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPET  205 (290)
Q Consensus       126 ~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (290)
                      +++++|+.++++++++++|+|++  .|+||++||..+..+.                                       
T Consensus       147 ~~~~vNl~g~~~l~~a~~p~m~~--~G~ii~iss~~~~~~~---------------------------------------  185 (299)
T PRK06300        147 AALSTSSYSFVSLLSHFGPIMNP--GGSTISLTYLASMRAV---------------------------------------  185 (299)
T ss_pred             HHHHHHhHHHHHHHHHHHHHhhc--CCeEEEEeehhhcCcC---------------------------------------
Confidence            99999999999999999999974  4799999998876543                                       


Q ss_pred             CCCCCCc-hhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccCC-----------------CCCChhhhcc
Q 039097          206 KGWPANA-AAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAE  264 (290)
Q Consensus       206 ~~~~~~~-~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~  264 (290)
                          ++. ..|++||+|+++|+++|+.|+ +  |||||+|+||++.|++....                 ...+|+++++
T Consensus       186 ----p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~  261 (299)
T PRK06300        186 ----PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVDYYQDWAPLPEPMEAEQVGA  261 (299)
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHHHHHhcCCCCCCcCHHHHHH
Confidence                333 379999999999999999998 3  89999999999999986421                 1347999999


Q ss_pred             chhhhhhccCCCCceeEeecCcc
Q 039097          265 SPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       265 ~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++|+++......+|+.+..++.
T Consensus       262 ~v~~L~s~~~~~itG~~i~vdGG  284 (299)
T PRK06300        262 AAAFLVSPLASAITGETLYVDHG  284 (299)
T ss_pred             HHHHHhCccccCCCCCEEEECCC
Confidence            99999998888899999888765

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=251.52  Aligned_cols=222  Identities=20%  Similarity=0.232  Sum_probs=187.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|+++||||++|||++++++|+++|++|++++|+..++++..+++.... .++.++++|++++++++++++++.+.++++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFP-GQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            6899999999999999999999999999999999887777666665443 468899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCCCCcc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSSLGKL  164 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~~g~~  164 (290)
                      |++|||||.....+..                +.+.++|++++++|+.+++++++++++.|.+. ..++||++||..+..
T Consensus        80 d~lI~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~  143 (252)
T PRK07677         80 DALINNAAGNFICPAE----------------DLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWD  143 (252)
T ss_pred             cEEEECCCCCCCCCcc----------------cCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhcc
Confidence            9999999965332222                33889999999999999999999999998754 358999999998765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-C--CeEEEEe
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-P--NFCINCV  241 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v  241 (290)
                      +.                                           ++...|++||+|+++++++|+.|+ +  |++||+|
T Consensus       144 ~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v  180 (252)
T PRK07677        144 AG-------------------------------------------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAI  180 (252)
T ss_pred             CC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEE
Confidence            43                                           445789999999999999999997 2  8999999


Q ss_pred             ecceeecCc-ccC-----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEM-TYN-----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~-~~~-----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+++|+. ...                 ....+|+++++.+.++++......+|+.+..++.
T Consensus       181 ~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  244 (252)
T PRK07677        181 APGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCITMDGG  244 (252)
T ss_pred             eecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEEEECCC
Confidence            999999532 111                 0134899999999999887777899999887764

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.5e-35  Score=278.87  Aligned_cols=219  Identities=30%  Similarity=0.389  Sum_probs=189.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ..+|++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++..+.+|++|+++++++++++.++++
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL----GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999987776655544    23577889999999999999999999999


Q ss_pred             CccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           84 KLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        84 ~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      ++|+||||||.... .+.                .+.+.++|++++++|+.+++++++.++|+|+  ..|+||++||..+
T Consensus       343 ~id~li~nAg~~~~~~~~----------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~  404 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPS----------------LEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIAS  404 (520)
T ss_pred             CCCEEEECCCCcCCCCCh----------------hhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhh
Confidence            99999999997632 222                2348899999999999999999999999993  4589999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+++++|+++++.|+  .+|+||+
T Consensus       405 ~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~  441 (520)
T PRK06484        405 LLAL-------------------------------------------PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNT  441 (520)
T ss_pred             cCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            7654                                           566899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+|+|++....                  ...+||++|+.++++++......+|+.+..++.
T Consensus       442 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        442 VAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             EEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            99999999985421                  124899999999999988778899999988764

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=262.53  Aligned_cols=213  Identities=26%  Similarity=0.295  Sum_probs=186.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..+++|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|++|.++++++++++.++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g-~~~~~v~~Dv~d~~~v~~~~~~~~~~   82 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAG-GEALAVVADVADAEAVQAAADRAEEE   82 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888888777776544 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.+++++++++|+.+++++++.++|+|++++.++||++||..
T Consensus        83 ~g~iD~lInnAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~  146 (334)
T PRK07109         83 LGPIDTWVNNAMVTVFGPFE----------------DVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSAL  146 (334)
T ss_pred             CCCCCEEEECCCcCCCCchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChh
Confidence            99999999999976443332                33889999999999999999999999999988789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~  237 (290)
                      +..+.                                           +....|+++|+++++++++++.|+    .+|+
T Consensus       147 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~  183 (334)
T PRK07109        147 AYRSI-------------------------------------------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVS  183 (334)
T ss_pred             hccCC-------------------------------------------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeE
Confidence            87653                                           456789999999999999999997    3699


Q ss_pred             EEEeecceeecCcccCC------------CCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+.|+||+++|++....            +..+||++|+.+++++..+.
T Consensus       184 v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~  232 (334)
T PRK07109        184 VTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHPR  232 (334)
T ss_pred             EEEEeCCCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999975421            23589999999999988764

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.7e-34  Score=251.18  Aligned_cols=223  Identities=24%  Similarity=0.289  Sum_probs=188.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++|++|||||++|||+++|++|+++|++|+++.+ +....++..++++..+ .++.++.+|+++.++++++++++.+.++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDLSDLPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999998865 4455556566665443 4688999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLG  162 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g  162 (290)
                      ++|++|||||.....+..                +.+.++|++++++|+.+++.+++++.++|.+++ .++||++||..+
T Consensus        80 ~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~  143 (256)
T PRK12743         80 RIDVLVNNAGAMTKAPFL----------------DMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE  143 (256)
T ss_pred             CCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc
Confidence            999999999986543222                238899999999999999999999999997553 589999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+++++++++++.++  .+|+||+
T Consensus       144 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~  180 (256)
T PRK12743        144 HTPL-------------------------------------------PGASAYTAAKHALGGLTKAMALELVEHGILVNA  180 (256)
T ss_pred             cCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            6543                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++....               ...+|+++++.+++++.......+|..+..++.
T Consensus       181 v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        181 VAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             EEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            99999999975431               134899999999999987777889999988875

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=3e-34  Score=258.46  Aligned_cols=256  Identities=23%  Similarity=0.266  Sum_probs=189.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++|+++||||++|||+++|++|+++| ++|++++|+.++.++..+++.. .+.++.++.+|+++.++++++++++.+.++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-PKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-CCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999 9999999998887777766642 234678899999999999999999998889


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEEEEcCCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNVSSSL  161 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV~isS~~  161 (290)
                      ++|++|||||+..+....               .+.+.++|++++++|+.+++++++.++|+|++++  .++||++||..
T Consensus        81 ~iD~lI~nAG~~~~~~~~---------------~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~  145 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKE---------------PRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSIT  145 (314)
T ss_pred             CCCEEEECCCccccCccc---------------cccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCc
Confidence            999999999975422111               1237899999999999999999999999998764  47999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC---CCeEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PNFCI  238 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~---~~i~v  238 (290)
                      +.......     ....+.++.  +.......+.+..  .......+ .+...|++||+|+..+++.|+.++   .+|+|
T Consensus       146 ~~~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~-~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v  215 (314)
T TIGR01289       146 GNTNTLAG-----NVPPKANLG--DLSGLAAGFKAPI--AMIDGKEF-KGAKAYKDSKVCNMLTVRELHRRFHDETGITF  215 (314)
T ss_pred             cccccCCC-----cCCCccccc--ccccccccCCCcc--cccCCCCc-chhhhHHHhHHHHHHHHHHHHHHhccCCCeEE
Confidence            75431100     000000000  0000000000000  00000011 245789999999999999999987   37999


Q ss_pred             EEeeccee-ecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          239 NCVCPGYV-KTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       239 n~v~PG~v-~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ++|+||+| .|++.+..                 +..+|++.++.++.++..+....+|.||..++
T Consensus       216 ~~v~PG~v~~T~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       216 ASLYPGCIADTGLFREHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             EEecCCcccCCcccccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            99999999 69986541                 14689999999999888777667899998644

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=2.3e-34  Score=251.41  Aligned_cols=223  Identities=28%  Similarity=0.364  Sum_probs=185.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||+++||||+++||+++|++|+++|++|++++|+..+..+..+++    +.++.++.+|+++.+++.++++++.+++
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL----GENAWFIAMDVADEAQVAAGVAEVLGQF   82 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999876655544333    2458889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.......              ...+.+.++|++++++|+.+++++++++.|+|++. .++||++||..+
T Consensus        83 g~id~li~~ag~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~  147 (255)
T PRK05717         83 GRLDALVCNAAIADPHNT--------------TLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRA  147 (255)
T ss_pred             CCCCEEEECCCcccCCCC--------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhh
Confidence            999999999998643211              01123889999999999999999999999999765 489999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v  241 (290)
                      ..+.                                           +....|+++|+|+++++++++.++ ++++||+|
T Consensus       148 ~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i  184 (255)
T PRK05717        148 RQSE-------------------------------------------PDTEAYAASKGGLLALTHALAISLGPEIRVNAV  184 (255)
T ss_pred             cCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            6643                                           445789999999999999999998 57999999


Q ss_pred             ecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||++.|++....                ...+|+++++.+.+++.......+|+.+..++.
T Consensus       185 ~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  246 (255)
T PRK05717        185 SPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDGG  246 (255)
T ss_pred             ecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            9999999874321                134789999999999877666778888777654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-34  Score=254.37  Aligned_cols=209  Identities=26%  Similarity=0.343  Sum_probs=183.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||+||||+++|++|+++|++|++++|+++++++..+++.     ++.++.||+++.+++.++++++.+.
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-----LVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----cceEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887776655552     4788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||+....+..+                .+.+.+++++++|+.+++.+++.++|.|++++.++||++||..
T Consensus        76 ~~~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  139 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLD----------------EPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLA  139 (273)
T ss_pred             cCCCCEEEECCCcCCCCcccc----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence            999999999999875443332                3789999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++.+++++++.++  .+++|+
T Consensus       140 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~  176 (273)
T PRK07825        140 GKIPV-------------------------------------------PGMATYCASKHAVVGFTDAARLELRGTGVHVS  176 (273)
T ss_pred             ccCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEE
Confidence            87654                                           566889999999999999999998  589999


Q ss_pred             EeecceeecCcccCC------CCCChhhhccchhhhhhccC
Q 039097          240 CVCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .|+||++.|++....      +..+|+++|+.++..+..+.
T Consensus       177 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        177 VVLPSFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             EEeCCcCcchhhcccccccCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999986543      45799999999999887655

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.4e-35  Score=257.23  Aligned_cols=217  Identities=32%  Similarity=0.395  Sum_probs=188.0

Q ss_pred             cCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc-CCccEEE
Q 039097           13 GAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF-GKLDILV   89 (290)
Q Consensus        13 Ggs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~li   89 (290)
                      |++  +|||+++|++|+++|++|++++|+.+++++.++++....+.+  ++++|++++++++++++++.+.+ +++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  999999999999999999999999998888888887766544  59999999999999999999999 9999999


Q ss_pred             EccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccch
Q 039097           90 NNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTH  169 (290)
Q Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~  169 (290)
                      ||+|......            ....+.+.+.++|++.+++|+.+++.+++++.|+|+++  ++||++||..+..+.   
T Consensus        79 ~~a~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~---  141 (241)
T PF13561_consen   79 NNAGISPPSN------------VEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPM---  141 (241)
T ss_dssp             EEEESCTGGG------------TSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBS---
T ss_pred             eccccccccc------------CCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccC---
Confidence            9999865411            11122344889999999999999999999999988754  899999999876654   


Q ss_pred             hhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeeccee
Q 039097          170 EWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYV  246 (290)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v  246 (290)
                                                              ++...|+++|+|+++++|++|.|+ +  |||||+|+||++
T Consensus       142 ----------------------------------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i  181 (241)
T PF13561_consen  142 ----------------------------------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPI  181 (241)
T ss_dssp             ----------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSB
T ss_pred             ----------------------------------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccce
Confidence                                                    566799999999999999999999 5  799999999999


Q ss_pred             ecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          247 KTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       247 ~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      .|++.+..                 +..+|||+|+.++||+++.....+|+.+..|+.-
T Consensus       182 ~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDGG~  240 (241)
T PF13561_consen  182 ETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDGGF  240 (241)
T ss_dssp             SSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEESTTG
T ss_pred             eccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECCCc
Confidence            99985432                 1258999999999999999899999999998863

...

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-34  Score=248.60  Aligned_cols=228  Identities=27%  Similarity=0.318  Sum_probs=197.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..+++|+++||||+|+||+++|++|+++|++|++++|++++.++..++++..+ .++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAG-GRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            556889999999999999999999999999999999999888777777775443 4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||.....+..+                .+.+++++.+++|+.+++.+++.+.+.|.++..+++|++||.
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~  144 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATE----------------LDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASD  144 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECch
Confidence            9999999999999865433322                388999999999999999999999999988778899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           +....|+++|++++.+++.++.++  .+++|
T Consensus       145 ~~~~~~-------------------------------------------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v  181 (250)
T PRK12939        145 TALWGA-------------------------------------------PKLGAYVASKGAVIGMTRSLARELGGRGITV  181 (250)
T ss_pred             hhccCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEE
Confidence            776543                                           345789999999999999999998  58999


Q ss_pred             EEeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +.|+||++.|++.+...                ..+|+|+++.+++++.......+|+++..++..
T Consensus       182 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg~  247 (250)
T PRK12939        182 NAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTGQLLPVNGGF  247 (250)
T ss_pred             EEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence            99999999999865321                258899999999999877778899999988854

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-34  Score=257.43  Aligned_cols=224  Identities=24%  Similarity=0.257  Sum_probs=188.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++|++|||||++|||+++|++|+++|++|++.+++. ...++..+++...+ .++.++.+|+++.+++.++++++.+
T Consensus         8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dv~d~~~~~~~~~~~~~   86 (306)
T PRK07792          8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAG-AKAVAVAGDISQRATADELVATAVG   86 (306)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHHHHHHHH
Confidence            368899999999999999999999999999999998854 45566667775543 4688999999999999999999998


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-------CCCe
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-------DSAR  153 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-------~~~~  153 (290)
                       ++++|+||||||+....+..                +.+.++|++++++|+.+++++++.+.++|+++       ..|+
T Consensus        87 -~g~iD~li~nAG~~~~~~~~----------------~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~  149 (306)
T PRK07792         87 -LGGLDIVVNNAGITRDRMLF----------------NMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGR  149 (306)
T ss_pred             -hCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcE
Confidence             99999999999987543322                23789999999999999999999999998743       1379


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                           ++...|+++|+|+++++++++.|+
T Consensus       150 iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~  186 (306)
T PRK07792        150 IVNTSSEAGLVGP-------------------------------------------VGQANYGAAKAGITALTLSAARAL  186 (306)
T ss_pred             EEEECCcccccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHh
Confidence            9999999876543                                           456789999999999999999998


Q ss_pred             --CCeEEEEeecceeecCcccCC------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 --PNFCINCVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                        .+|+||+|+||. .|+|....            .+++|++++..+.++++......+|+++..++.
T Consensus       187 ~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg  253 (306)
T PRK07792        187 GRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGP  253 (306)
T ss_pred             hhcCeEEEEECCCC-CCchhhhhccccchhhhhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence              489999999994 78775321            245799999999999987777789998887764

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=251.46  Aligned_cols=226  Identities=28%  Similarity=0.339  Sum_probs=193.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.++..+.+...+ .++.++.+|+++++++.++++++.+.+
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAG-RRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999999887777777765433 468889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc-CCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~-~~~~~iV~isS~~  161 (290)
                      +++|+||||||.....+..                +.+.+++++++++|+.+++.+++++.++|.+ ...++||++||..
T Consensus        86 ~~id~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~  149 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLL----------------STSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTM  149 (263)
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccc
Confidence            9999999999975433322                2388999999999999999999999999986 4568999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~  240 (290)
                      +..+.                                           ++...|+++|++++.++++++.++ ++++||+
T Consensus       150 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~  186 (263)
T PRK07814        150 GRLAG-------------------------------------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNA  186 (263)
T ss_pred             ccCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEE
Confidence            87653                                           456789999999999999999998 6899999


Q ss_pred             eecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++....                 ...+|+++|+.+++++.......+|+.+..++..
T Consensus       187 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~~  251 (263)
T PRK07814        187 IAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTLEVDGGL  251 (263)
T ss_pred             EEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCCc
Confidence            99999999875421                 1247899999999999887778899998877653

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=2.2e-34  Score=251.89  Aligned_cols=220  Identities=22%  Similarity=0.224  Sum_probs=183.5

Q ss_pred             EEEEecCCCchhHHHHHHHHH----CCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLAL----NGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~----~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||||++|||+++|++|++    +|++|++++|+.+.+++..+++.... +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    79999999999988888888886532 3468899999999999999999998877


Q ss_pred             CCc----cEEEEccccCCCCCC-CCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEE
Q 039097           83 GKL----DILVNNAGITGISSD-ADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIV  155 (290)
Q Consensus        83 ~~i----d~li~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV  155 (290)
                      +++    |+||||||....... ...              ..+.++|++++++|+.+++.+++.++|.|+++.  .++||
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~--------------~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv  147 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVD--------------LSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVV  147 (256)
T ss_pred             ccCCCceEEEEeCCcccCcccccccc--------------CCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEE
Confidence            653    699999997542211 110              015689999999999999999999999998653  47999


Q ss_pred             EEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--
Q 039097          156 NVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--  233 (290)
Q Consensus       156 ~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--  233 (290)
                      ++||..+..+.                                           ++...|++||+|+++++++|+.|+  
T Consensus       148 ~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~  184 (256)
T TIGR01500       148 NISSLCAIQPF-------------------------------------------KGWALYCAGKAARDMLFQVLALEEKN  184 (256)
T ss_pred             EECCHHhCCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcC
Confidence            99999876554                                           456889999999999999999998  


Q ss_pred             CCeEEEEeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          234 PNFCINCVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+|+||+|+||+++|+|.+..                    +..+|||+|+.+++++.. ....+|++++..
T Consensus       185 ~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~~~-~~~~~G~~~~~~  255 (256)
T TIGR01500       185 PNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLLEK-DKFKSGAHVDYY  255 (256)
T ss_pred             CCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-CCcCCcceeecc
Confidence            589999999999999986421                    246999999999999864 457899988764

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=254.78  Aligned_cols=237  Identities=21%  Similarity=0.206  Sum_probs=180.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|+++|||+ +|||+++|++|+ +|++|++++|+.+++++..++++.. +.++.++++|++|.+++.++++++ +++++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA-GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            4789999998 699999999996 8999999999988777777777543 346888999999999999999998 56899


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||+..                       +.++|++++++|+.+++++++.+.|.|++  .+++|++||..+..
T Consensus        77 id~li~nAG~~~-----------------------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~  131 (275)
T PRK06940         77 VTGLVHTAGVSP-----------------------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHR  131 (275)
T ss_pred             CCEEEECCCcCC-----------------------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEeccccc
Confidence            999999999742                       34678999999999999999999999974  37889999988765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCC----CCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPE----TKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      ........+.               .. ... +..+....    .....++...|++||+|++.++++++.++  .+|||
T Consensus       132 ~~~~~~~~~~---------------~~-~~~-~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrv  194 (275)
T PRK06940        132 LPALTAEQER---------------AL-ATT-PTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARI  194 (275)
T ss_pred             Ccccchhhhc---------------cc-ccc-ccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEE
Confidence            3200000000               00 000 00000000    00000235789999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++....                   ...+|||+|+.++|++++.....+|+.+..++.
T Consensus       195 n~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg  262 (275)
T PRK06940        195 NSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG  262 (275)
T ss_pred             EEeccCcCcCccchhhhcCCchHHHHHHhhhCCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence            9999999999985320                   124899999999999998888899998888765

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-34  Score=248.76  Aligned_cols=225  Identities=23%  Similarity=0.257  Sum_probs=191.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEE-EecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVL-TARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |++|+++||||+||||++++++|+++|++|++ .+|+.++.++..++++..+ .++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG-RKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999876 5788777777777776544 458889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||.....+..+                .+.+.+++.+++|+.+++.+++++.+.|++++.++||++||..+
T Consensus        81 ~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~  144 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAME----------------LEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGS  144 (250)
T ss_pred             CCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh
Confidence            99999999999765444332                37899999999999999999999999998888899999999866


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.++++++.++  .++++|+
T Consensus       145 ~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~  181 (250)
T PRK08063        145 IRYL-------------------------------------------ENYTTVGVSKAALEALTRYLAVELAPKGIAVNA  181 (250)
T ss_pred             ccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEe
Confidence            5432                                           445789999999999999999998  5899999


Q ss_pred             eecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++....                 ...+++++|+.+++++..+....+|+++..++..
T Consensus       182 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  246 (250)
T PRK08063        182 VSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGGR  246 (250)
T ss_pred             EecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCe
Confidence            99999999875421                 2468899999999999877777889998877753

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.9e-34  Score=257.91  Aligned_cols=252  Identities=22%  Similarity=0.236  Sum_probs=186.4

Q ss_pred             EEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097           10 VVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus        10 lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      |||||++|||+++|++|+++| ++|++++|+.++.++..+++... +.++.++.+|+++.++++++++++.+.++++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP-KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC-CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 99999999988777777666432 2468889999999999999999999888999999


Q ss_pred             EEccccCCCC-CCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEEEEcCCCCccc
Q 039097           89 VNNAGITGIS-SDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNVSSSLGKLM  165 (290)
Q Consensus        89 i~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV~isS~~g~~~  165 (290)
                      |||||+.... +..                +.+.++|++++++|+.|++++++.++|.|++++  +|+||++||..+..+
T Consensus        80 InnAG~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~  143 (308)
T PLN00015         80 VCNAAVYLPTAKEP----------------TFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTN  143 (308)
T ss_pred             EECCCcCCCCCCcC----------------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccc
Confidence            9999986432 111                237899999999999999999999999998775  689999999987542


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC---CCeEEEEee
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PNFCINCVC  242 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~---~~i~vn~v~  242 (290)
                      .....       .++......++.....+. +.+...........+..+|++||+|+..+++.++.++   .+|+||+|+
T Consensus       144 ~~~~~-------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~  215 (308)
T PLN00015        144 TLAGN-------VPPKANLGDLRGLAGGLN-GLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLY  215 (308)
T ss_pred             ccccc-------CCCccchhhhhhhhcccC-CccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEec
Confidence            10000       000000000000000000 0000000000001345789999999999999999998   379999999


Q ss_pred             ccee-ecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          243 PGYV-KTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       243 PG~v-~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ||+| .|+|.+..                 +..+||+.|+.+++++.+.....+|+|+..++
T Consensus       216 PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g  277 (308)
T PLN00015        216 PGCIATTGLFREHIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNG  277 (308)
T ss_pred             CCcccCccccccccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCC
Confidence            9999 78886542                 24689999999999999888778999998754

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=250.88  Aligned_cols=225  Identities=26%  Similarity=0.298  Sum_probs=187.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||++++++|+++|++|++.+|+..+...          .++.++++|++++++++++++++.+.+
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH----------ENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc----------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5779999999999999999999999999999999998765321          257889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||........+.       .......+.+.++|++++++|+.+++++++++.++|+++..++||++||..+
T Consensus        76 g~id~li~~Ag~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  148 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDE-------KDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG  148 (266)
T ss_pred             CCCCEEEECCcccCCcccccc-------ccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc
Confidence            999999999998643221110       0011122458899999999999999999999999998877899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+++++++++++.++  .+|+||+
T Consensus       149 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~  185 (266)
T PRK06171        149 LEGS-------------------------------------------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVG  185 (266)
T ss_pred             cCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            6643                                           456889999999999999999998  4899999


Q ss_pred             eecceee-cCccc--------------------------CC---CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVK-TEMTY--------------------------NA---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~-T~~~~--------------------------~~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++ |++..                          ..   ....|||+|+.+.++++......+|+.+..++.
T Consensus       186 v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg  262 (266)
T PRK06171        186 VAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG  262 (266)
T ss_pred             EeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence            9999996 55421                          00   124789999999999998888899999998875

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-34  Score=250.89  Aligned_cols=226  Identities=23%  Similarity=0.285  Sum_probs=190.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|+++||||++|||.+++++|+++|++|++++|+++.+.+..+++...+ .++.++.+|+++++++.++++++.+
T Consensus         4 ~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          4 MFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAG-PEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            667889999999999999999999999999999999999887776666665443 3578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||.....+..                +.+.++|++.+++|+.++++++++++|.|+++ +++||++||.
T Consensus        83 ~~~~iD~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~  145 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPAPAA----------------GMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAP  145 (264)
T ss_pred             HcCCCCEEEECCCCCCCCccc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECCh
Confidence            999999999999865433222                23789999999999999999999999998755 4899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.++++++.++  .+++|
T Consensus       146 ~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v  182 (264)
T PRK07576        146 QAFVPM-------------------------------------------PMQAHVCAAKAGVDMLTRTLALEWGPEGIRV  182 (264)
T ss_pred             hhccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            776543                                           556889999999999999999998  58999


Q ss_pred             EEeecceee-cCcccC-----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVK-TEMTYN-----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~-T~~~~~-----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.|+||++. |+....                 ....+|+++|+.+++++..+....+|..+..++.
T Consensus       183 ~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~~~gg  249 (264)
T PRK07576        183 NSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVLPVDGG  249 (264)
T ss_pred             EEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCccCCEEEECCC
Confidence            999999996 553211                 1134789999999999987777889999888775

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=6.6e-34  Score=234.85  Aligned_cols=226  Identities=30%  Similarity=0.405  Sum_probs=186.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC-CCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh--
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALN-GIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH--   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--   81 (290)
                      -|.++||||++|||..++++|+.. |..+++. .|+++++.+ .-+++.....++++++.|+++.+++.++++++.+-  
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~-~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAAT-ELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhH-HHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            355999999999999999999976 5655544 566776522 11222334568999999999999999999999987  


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC----------
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS----------  151 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~----------  151 (290)
                      ...+|++|+|||+...-...               .+.+.+.|.+.+++|..|++++.|+++|++++...          
T Consensus        82 ~~GlnlLinNaGi~~~y~~~---------------~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~  146 (249)
T KOG1611|consen   82 SDGLNLLINNAGIALSYNTV---------------LKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVS  146 (249)
T ss_pred             cCCceEEEeccceeeecccc---------------cCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccccc
Confidence            45899999999997542222               12278999999999999999999999999987643          


Q ss_pred             -CeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 039097          152 -ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA  230 (290)
Q Consensus       152 -~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la  230 (290)
                       ..|||+||..+..+.                                        ..+.+..+|.+||+|+++++|+++
T Consensus       147 raaIinisS~~~s~~~----------------------------------------~~~~~~~AYrmSKaAlN~f~ksls  186 (249)
T KOG1611|consen  147 RAAIINISSSAGSIGG----------------------------------------FRPGGLSAYRMSKAALNMFAKSLS  186 (249)
T ss_pred             ceeEEEeeccccccCC----------------------------------------CCCcchhhhHhhHHHHHHHHHHhh
Confidence             389999998876432                                        223567999999999999999999


Q ss_pred             hhCC--CeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          231 KKYP--NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       231 ~e~~--~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++.  +|-|.++|||||.|+|......+++|+-+..++..+.......+|.||..++.
T Consensus       187 ~dL~~~~ilv~sihPGwV~TDMgg~~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  187 VDLKDDHILVVSIHPGWVQTDMGGKKAALTVEESTSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             hhhcCCcEEEEEecCCeEEcCCCCCCcccchhhhHHHHHHHHHhcCcccCcceEccCCC
Confidence            9994  67889999999999999999999999999999999988888899999998764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.6e-34  Score=247.65  Aligned_cols=229  Identities=23%  Similarity=0.265  Sum_probs=185.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|++|||||++|||+++|++|+++|++|++..++ ..+.+...+++    +.++.++++|+++.++++++++++.+
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL----GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999987654 33333333322    24688899999999999999999999


Q ss_pred             hcCC-ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGK-LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      .+++ +|++|||||........          ......+.+.++|++.+++|+.+++++++.++|.|.+...++||++||
T Consensus        77 ~~g~~id~li~~ag~~~~~~~~----------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss  146 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFDGD----------ARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGT  146 (253)
T ss_pred             HhCCCCeEEEECCCcccccccc----------CCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence            9887 99999999874311000          001123448899999999999999999999999998777789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           .+...|++||+|+++++++++.++  .+|+
T Consensus       147 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~  183 (253)
T PRK08642        147 NLFQNPV-------------------------------------------VPYHDYTTAKAALLGLTRNLAAELGPYGIT  183 (253)
T ss_pred             ccccCCC-------------------------------------------CCccchHHHHHHHHHHHHHHHHHhCccCeE
Confidence            7654322                                           345689999999999999999998  5899


Q ss_pred             EEEeecceeecCcccC----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYN----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+++|+....                ....+|+++|+.+++++.+.....+|+.+..++.
T Consensus       184 v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~vdgg  249 (253)
T PRK08642        184 VNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQNLVVDGG  249 (253)
T ss_pred             EEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            9999999999985432                1245899999999999998888999999988875

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=3.4e-35  Score=242.48  Aligned_cols=213  Identities=28%  Similarity=0.376  Sum_probs=182.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++||.+++|||.||||++++++|+++|.++.+..-+.+.. ++..+++... ..++.+++||+++..++++.++++.+.
T Consensus         2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999877777666653 4455665554 347999999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEEEc
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVNVS  158 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~is  158 (290)
                      +|.||++||+||+.                        +..+|+.++.+|+.|.++-+...+|+|.++.   +|-|||+|
T Consensus        81 fg~iDIlINgAGi~------------------------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNms  136 (261)
T KOG4169|consen   81 FGTIDILINGAGIL------------------------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMS  136 (261)
T ss_pred             hCceEEEEcccccc------------------------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEec
Confidence            99999999999987                        6788999999999999999999999998764   47899999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----C
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----P  234 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~  234 (290)
                      |..|..+.                                           +..+.|++||+++..|||++|...    .
T Consensus       137 Sv~GL~P~-------------------------------------------p~~pVY~AsKaGVvgFTRSla~~ayy~~s  173 (261)
T KOG4169|consen  137 SVAGLDPM-------------------------------------------PVFPVYAASKAGVVGFTRSLADLAYYQRS  173 (261)
T ss_pred             cccccCcc-------------------------------------------ccchhhhhcccceeeeehhhhhhhhHhhc
Confidence            99998765                                           566899999999999999999775    4


Q ss_pred             CeEEEEeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          235 NFCINCVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ||++|+||||++.|.+..+.                    +..+|+.++..++..+..   ..+|..|..+.
T Consensus       174 GV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~---~~NGaiw~v~~  242 (261)
T KOG4169|consen  174 GVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEY---PKNGAIWKVDS  242 (261)
T ss_pred             CEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhh---ccCCcEEEEec
Confidence            99999999999999987664                    245778888888777664   45666665543

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=256.25  Aligned_cols=237  Identities=28%  Similarity=0.352  Sum_probs=186.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |+++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++.+|++|.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            567889999999999999999999999999999999999888777777775432 3468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|+||||||...+..                  ..+.++++..+++|+.+++.+++.++|.|++.+.++||++||
T Consensus        91 ~~~~~iD~li~nAg~~~~~~------------------~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS  152 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTPK------------------QTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSS  152 (306)
T ss_pred             hhCCCCCEEEECCccccCCC------------------ccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECC
Confidence            99999999999999864321                  126788999999999999999999999999877789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+.......         ..                +...    ... .++...|+.||+|++++++.++.++  .+++
T Consensus       153 ~~~~~~~~~~---------~~----------------~~~~----~~~-~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~  202 (306)
T PRK06197        153 GGHRIRAAIH---------FD----------------DLQW----ERR-YNRVAAYGQSKLANLLFTYELQRRLAAAGAT  202 (306)
T ss_pred             HHHhccCCCC---------cc----------------ccCc----ccC-CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence            8654311000         00                0000    000 1345789999999999999999998  4666


Q ss_pred             EE--EeecceeecCcccCCC--------------CCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          238 IN--CVCPGYVKTEMTYNAG--------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       238 vn--~v~PG~v~T~~~~~~~--------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |+  +++||+|.|++.+..+              ..++++.+...++++..+. ..+|.++..++
T Consensus       203 v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~~~~~~  266 (306)
T PRK06197        203 TIAVAAHPGVSNTELARNLPRALRPVATVLAPLLAQSPEMGALPTLRAATDPA-VRGGQYYGPDG  266 (306)
T ss_pred             eEEEEeCCCcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHHHHHHhcCCC-cCCCeEEccCc
Confidence            65  4579999999977542              2467777877777777554 45789887654

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-34  Score=248.42  Aligned_cols=220  Identities=30%  Similarity=0.361  Sum_probs=185.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||++++++|+++|++|++++|+....          ...++.++++|+++.++++++++++.+.+
T Consensus         6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD----------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh----------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999986431          12357889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.......              ...+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+
T Consensus        76 ~~id~vi~~ag~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~  141 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAG--------------GFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQR  141 (260)
T ss_pred             CCCCEEEECCcccccCCC--------------CcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccc
Confidence            999999999997532110              111237899999999999999999999999999877789999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                          +.+...|+++|++++.++++++.++  .+|+||+
T Consensus       142 ~~~~------------------------------------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~  179 (260)
T PRK06523        142 RLPL------------------------------------------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNT  179 (260)
T ss_pred             cCCC------------------------------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            6542                                          1246789999999999999999998  4899999


Q ss_pred             eecceeecCcccC--------------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYN--------------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~--------------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|++...                          .   ...+|+|+++.++++++......+|+.+..++..
T Consensus       180 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~  256 (260)
T PRK06523        180 VSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGT  256 (260)
T ss_pred             EecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCc
Confidence            9999999997421                          0   1247899999999999887778999998887753

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=6e-34  Score=256.58  Aligned_cols=230  Identities=28%  Similarity=0.324  Sum_probs=184.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+.++.++..+++.     .+.++.+|++|.++++++++++.+.+
T Consensus        23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            4578999999999999999999999999999999999887777666653     37889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....  .                ..+.++|+..+++|+.+++++++.++|.|++.+.++||++||..+
T Consensus        98 ~~iD~li~nAg~~~~~--~----------------~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~  159 (315)
T PRK06196         98 RRIDILINNAGVMACP--E----------------TRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGH  159 (315)
T ss_pred             CCCCEEEECCCCCCCC--C----------------ccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHh
Confidence            9999999999976421  1                126688999999999999999999999998877789999999754


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      .......                             .+... ... .++...|+.||++++.+++.++.++  .+|+||+
T Consensus       160 ~~~~~~~-----------------------------~~~~~-~~~-~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~  208 (315)
T PRK06196        160 RRSPIRW-----------------------------DDPHF-TRG-YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFS  208 (315)
T ss_pred             ccCCCCc-----------------------------cccCc-cCC-CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence            3321100                             00000 000 1345789999999999999999998  4899999


Q ss_pred             eecceeecCcccCCC--------------------CCChhhhccchhhhhhccCC-CCceeEeecCc
Q 039097          241 VCPGYVKTEMTYNAG--------------------RLTVEEGAESPVWLALLHKG-GPSGLFFSRKE  286 (290)
Q Consensus       241 v~PG~v~T~~~~~~~--------------------~~~~e~~a~~~~~l~~~~~~-~~~g~~~~~~~  286 (290)
                      |+||++.|++.+..+                    ..+|+++|..+++++..+.. ..+|.|+..++
T Consensus       209 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~g~~~~~~~  275 (315)
T PRK06196        209 VHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATSPQLAGMGGLYCEDCD  275 (315)
T ss_pred             eeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcCCccCCCCCeEeCCCc
Confidence            999999999854321                    34789999999999987664 35677775543

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.1e-33  Score=245.56  Aligned_cols=224  Identities=27%  Similarity=0.319  Sum_probs=188.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |++|+++||||++|||+++|++|+++|++|++.. |+....++..+++...+ .++..+.+|++|.+++.++++++.+.+
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALG-FDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            5689999999999999999999999999988854 45555555555554433 357888999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||.....+..                +.+.++|++++++|+.+++.+++++++.|++++.++||++||..+
T Consensus        80 ~~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  143 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFR----------------KMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG  143 (246)
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhc
Confidence            9999999999986433222                238899999999999999999999999998877789999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.++++++.++  .++++|+
T Consensus       144 ~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~  180 (246)
T PRK12938        144 QKGQ-------------------------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNT  180 (246)
T ss_pred             cCCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            6543                                           456789999999999999999998  5899999


Q ss_pred             eecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||++.|++....               ...+|+++++.+++++++.....+|+.+..++.
T Consensus       181 i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~~~~~g  242 (246)
T PRK12938        181 VSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG  242 (246)
T ss_pred             EEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEEEECCc
Confidence            99999999985431               135889999999999988878899998887764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-34  Score=248.04  Aligned_cols=222  Identities=27%  Similarity=0.311  Sum_probs=188.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|++|++|||||++|||+++|++|+++|++|++++|++.+. +..+++...+ .++.++.+|+++.++++++++++.+.+
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQ-PRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            68899999999999999999999999999999999998766 5556665443 458899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||........                 .+.++|++.+++|+.+++.+++.+.|.|++. .++||++||..+
T Consensus        82 ~~id~vi~~ag~~~~~~~~-----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~  143 (258)
T PRK08628         82 GRIDGLVNNAGVNDGVGLE-----------------AGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTA  143 (258)
T ss_pred             CCCCEEEECCcccCCCccc-----------------CCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHh
Confidence            9999999999975322211                 1449999999999999999999999998755 489999999887


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       144 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~  180 (258)
T PRK08628        144 LTGQ-------------------------------------------GGTSGYAAAKGAQLALTREWAVALAKDGVRVNA  180 (258)
T ss_pred             ccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            7543                                           456899999999999999999998  5899999


Q ss_pred             eecceeecCcccC----------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYN----------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~----------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++...                      ....+|+++|+.+++++.......+|+.+..++.
T Consensus       181 v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  249 (258)
T PRK08628        181 VIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGG  249 (258)
T ss_pred             EecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhccccCceEEecCC
Confidence            9999999997431                      0235799999999999998877888988877654

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=245.52  Aligned_cols=225  Identities=26%  Similarity=0.340  Sum_probs=193.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||+|+||++++++|+++|++|++++|+.+++++..+++.... .++.++.+|+++.++++++++++.+.+
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEG-GAAHVVSLDVTDYQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999888777766664433 358899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--------CCeE
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--------SARI  154 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--------~~~i  154 (290)
                      +++|++|||||.....+..+                .+.++|+.++++|+.+++.++++++|.|+++.        .++|
T Consensus        85 ~~~d~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i  148 (258)
T PRK06949         85 GTIDILVNNSGVSTTQKLVD----------------VTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRI  148 (258)
T ss_pred             CCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEE
Confidence            99999999999864433322                27889999999999999999999999987553        4799


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+.                                           +....|+++|++++.++++++.++ 
T Consensus       149 v~~sS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~  185 (258)
T PRK06949        149 INIASVAGLRVL-------------------------------------------PQIGLYCMSKAAVVHMTRAMALEWG  185 (258)
T ss_pred             EEECcccccCCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHH
Confidence            999998776543                                           345789999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 -PNFCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                       .+++||+|+||++.|++....                ....|+++++.+.|+++......+|+++..++.
T Consensus       186 ~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i~~dgg  256 (258)
T PRK06949        186 RHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADESQFINGAIISADDG  256 (258)
T ss_pred             hcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence             589999999999999985421                234799999999999998888999999988874

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-33  Score=245.68  Aligned_cols=225  Identities=24%  Similarity=0.245  Sum_probs=187.3

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCc-----------ccHHHHHHHHHhcCCCcEEEEEeeCCCHH
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDE-----------KGGLEAVEKLKHSGFDNVIFHQLDVADPA   69 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   69 (290)
                      ++++|++|||||++  |||.++|++|+++|++|++++|++           .......+++... +.++.++.+|+++.+
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~   80 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY-GVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc-CCeEEEEECCCCCHH
Confidence            57889999999995  999999999999999999999882           2222233333322 346889999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      ++.++++++.++++++|+||||||+....+..                +.+.+++++.+++|+.+++.+++++.+.|.+.
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~  144 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLE----------------ELTAEQLDKHYAVNVRATMLLSSAFAKQYDGK  144 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhc
Confidence            99999999999999999999999986443322                23889999999999999999999999999877


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                      ..++||++||..+..+.                                           ++...|+++|+|++++++++
T Consensus       145 ~~~~iv~~ss~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l  181 (256)
T PRK12748        145 AGGRIINLTSGQSLGPM-------------------------------------------PDELAYAATKGAIEAFTKSL  181 (256)
T ss_pred             CCeEEEEECCccccCCC-------------------------------------------CCchHHHHHHHHHHHHHHHH
Confidence            77899999998765543                                           45678999999999999999


Q ss_pred             HhhC--CCeEEEEeecceeecCcccCC------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          230 AKKY--PNFCINCVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       230 a~e~--~~i~vn~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.++  .+++|++++||++.|++....            ...+|+++|+.+.+++.......+|+++..++.
T Consensus       182 a~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g  253 (256)
T PRK12748        182 APELAEKGITVNAVNPGPTDTGWITEELKHHLVPKFPQGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG  253 (256)
T ss_pred             HHHHHHhCeEEEEEEeCcccCCCCChhHHHhhhccCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence            9998  589999999999999864321            135899999999999988777789999988764

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=245.83  Aligned_cols=222  Identities=27%  Similarity=0.302  Sum_probs=188.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..+++|+++||||+++||++++++|+++|++|++++|+.+..++..+++    +.++.++++|+++.+++.++++.+.+
T Consensus         1 m~~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (249)
T PRK06500          1 MSRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL----GESALVIRADAGDVAAQKALAQALAE   76 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999876655554444    34678899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||.....+..                +.+.++|++++++|+.+++++++++.|+|++  .+++|+++|.
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~  138 (249)
T PRK06500         77 AFGRLDAVFINAGVAKFAPLE----------------DWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSI  138 (249)
T ss_pred             HhCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEech
Confidence            999999999999976543322                2388999999999999999999999999863  4789999988


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|+++++++++++.++  .++++
T Consensus       139 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  175 (249)
T PRK06500        139 NAHIGM-------------------------------------------PNSSVYAASKAALLSLAKTLSGELLPRGIRV  175 (249)
T ss_pred             HhccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            766543                                           456789999999999999999998  58999


Q ss_pred             EEeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.++||++.|++.+..                     ...+|+++++.+++++.......+|..+..++.
T Consensus       176 ~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~gg  245 (249)
T PRK06500        176 NAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGSEIIVDGG  245 (249)
T ss_pred             EEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            9999999999974321                     123789999999999987777888888877764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.9e-33  Score=243.43  Aligned_cols=224  Identities=27%  Similarity=0.326  Sum_probs=190.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||+|+||++++++|+++|+.|++.+|+.+++++..+.+    +.++.++.+|+++.++++++++++.+
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (245)
T PRK12936          1 MFDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL----GERVKIFPANLSDRDEVKALGQKAEA   76 (245)
T ss_pred             CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999877666544433    23578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||.....+...                .+.++|++++++|+.+++++++.+.+.+++++.++||++||.
T Consensus        77 ~~~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  140 (245)
T PRK12936         77 DLEGVDILVNNAGITKDGLFVR----------------MSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV  140 (245)
T ss_pred             HcCCCCEEEECCCCCCCCcccc----------------CCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence            9999999999999865433222                277899999999999999999999998877777899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|+++.++++.++.++  .++++
T Consensus       141 ~~~~~~-------------------------------------------~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v  177 (245)
T PRK12936        141 VGVTGN-------------------------------------------PGQANYCASKAGMIGFSKSLAQEIATRNVTV  177 (245)
T ss_pred             HhCcCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhHhCeEE
Confidence            777653                                           445789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++++||+++|++....               ...+|+++++.+.+++.......+|+.+..++.
T Consensus       178 ~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        178 NCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             EEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence            9999999999875432               124789999999999887766789998887765

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=245.69  Aligned_cols=227  Identities=25%  Similarity=0.362  Sum_probs=193.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||+|+||++++++|+++|++|++++|++++.++..+++...+ .++.++.+|+++.++++++++++.+
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAG-GKAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcC-ceEEEEECCCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999988888777775543 4688899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh-ccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL-QLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l-~~~~~~~iV~isS  159 (290)
                      .++++|+||||||.....+...                .+.++++..+++|+.+++.+++.+++.| ++.+.++||++||
T Consensus        81 ~~~~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss  144 (262)
T PRK13394         81 RFGSVDILVSNAGIQIVNPIEN----------------YSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGS  144 (262)
T ss_pred             HcCCCCEEEECCccCCCCchhh----------------CCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcc
Confidence            9999999999999865433322                2778999999999999999999999999 6666789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+++|+++++++++++.++  .+++
T Consensus       145 ~~~~~~~-------------------------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~  181 (262)
T PRK13394        145 VHSHEAS-------------------------------------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVR  181 (262)
T ss_pred             hhhcCCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            8765432                                           345789999999999999999998  5899


Q ss_pred             EEEeecceeecCcccC---------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYN---------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~---------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+|.||++.|++...                           ....+++|+++.+++++..+....+|++|..++.
T Consensus       182 v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        182 SHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             EEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            9999999999986421                           1135889999999999887766778998888765

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=2e-33  Score=245.20  Aligned_cols=238  Identities=19%  Similarity=0.201  Sum_probs=191.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|+++||||++|||+++|++|+++|++|++++|++++.++..+++.... ...+.++.||++|.+++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999888888877775442 3356778999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.......             ....+.+.+.+++.+++|+.+++.+++.++|+|++++.++||++||..+
T Consensus        82 ~~id~vi~~A~~~~~~~~-------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~  148 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYG-------------KKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYG  148 (256)
T ss_pred             CCccEEEECCcccccccc-------------CccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence            999999999986432110             0112348899999999999999999999999998887789999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      .......                            .   ..  ...+.....|++||+++++++++++.++  .+++||.
T Consensus       149 ~~~~~~~----------------------------~---~~--~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~  195 (256)
T PRK09186        149 VVAPKFE----------------------------I---YE--GTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNC  195 (256)
T ss_pred             hccccch----------------------------h---cc--ccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEE
Confidence            5422000                            0   00  0000122479999999999999999998  5899999


Q ss_pred             eecceeecCcccC-----------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYN-----------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~-----------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++||++.|+....           ....+|+|+|+.+++++.+.....+|+++..++.
T Consensus       196 i~Pg~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  253 (256)
T PRK09186        196 VSPGGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDDG  253 (256)
T ss_pred             EecccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhheeccccccccCceEEecCC
Confidence            9999998764221           2357999999999999988877889999887764

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=7.6e-34  Score=256.29  Aligned_cols=211  Identities=21%  Similarity=0.262  Sum_probs=170.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|++++||||++|||+++|++|+++|++|++++|+++++++..+++....+ .++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            589999999999999999999999999999999999998888888876543 468888999985  23334444444444


Q ss_pred             --CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           84 --KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        84 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .+|++|||||+......              .+.+.+.+++++++++|+.|++.+++.++|.|++++.|+||++||..
T Consensus       130 ~~didilVnnAG~~~~~~~--------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a  195 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYAR--------------FFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGA  195 (320)
T ss_pred             CCCccEEEEecCcCCCCCc--------------ccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechh
Confidence              46699999998643110              01233889999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +.....                                         .+....|++||+|+++++++|+.|+  .||+|+
T Consensus       196 ~~~~~~-----------------------------------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~  234 (320)
T PLN02780        196 AIVIPS-----------------------------------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQ  234 (320)
T ss_pred             hccCCC-----------------------------------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEE
Confidence            753110                                         0456899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC----CCCChhhhccchhhhhhc
Q 039097          240 CVCPGYVKTEMTYNA----GRLTVEEGAESPVWLALL  272 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----~~~~~e~~a~~~~~l~~~  272 (290)
                      +|+||+++|+|....    ...+||++|+.++..+..
T Consensus       235 ~v~PG~v~T~~~~~~~~~~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        235 CQVPLYVATKMASIRRSSFLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             EEeeCceecCcccccCCCCCCCCHHHHHHHHHHHhCC
Confidence            999999999997632    235899999999988753

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=244.31  Aligned_cols=225  Identities=28%  Similarity=0.333  Sum_probs=194.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++||||+|+||+++|++|+++|++|++++|+.+...+..+++.  .+.++.++.+|++|.++++++++++.+.
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--AGGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35889999999999999999999999999999999999877776666665  3346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||........                +.+.+++++++++|+.+++.+++.+++.|++.+.++||++||..
T Consensus        79 ~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~  142 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVV----------------TTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQL  142 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChh
Confidence            99999999999986543322                23889999999999999999999999999988788999999997


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+.+|++++.+++.++.++  .+++|+
T Consensus       143 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~  179 (252)
T PRK06138        143 ALAGG-------------------------------------------RGRAAYVASKGAIASLTRAMALDHATDGIRVN  179 (252)
T ss_pred             hccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEE
Confidence            76543                                           456789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++||++.|++....                     ...+++++++.+++++..+....+|.++..++.
T Consensus       180 ~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  248 (252)
T PRK06138        180 AVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFATGTTLVVDGG  248 (252)
T ss_pred             EEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            999999999975421                     124689999999999988887889998887764

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.1e-33  Score=249.41  Aligned_cols=211  Identities=28%  Similarity=0.321  Sum_probs=180.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||+||||+++|++|+++|++|++++|+.+.+++..+++... +.++.++.+|++|.+++.++++.+.+
T Consensus         1 m~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~   79 (287)
T PRK06194          1 MKDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-GAEVLGVRTDVSDAAQVEALADAALE   79 (287)
T ss_pred             CcCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999988777777776544 34688899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC------CeE
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS------ARI  154 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~------~~i  154 (290)
                      .++++|+||||||.....+..+                .+.++|++++++|+.++++++++++|.|.++..      ++|
T Consensus        80 ~~g~id~vi~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~i  143 (287)
T PRK06194         80 RFGAVHLLFNNAGVGAGGLVWE----------------NSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHI  143 (287)
T ss_pred             HcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEE
Confidence            9999999999999876543332                388999999999999999999999999987654      799


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+.                                           ++...|+++|++++.++++++.++ 
T Consensus       144 v~~sS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~  180 (287)
T PRK06194        144 VNTASMAGLLAP-------------------------------------------PAMGIYNVSKHAVVSLTETLYQDLS  180 (287)
T ss_pred             EEeCChhhccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHh
Confidence            999999887643                                           455789999999999999999987 


Q ss_pred             ---CCeEEEEeecceeecCcccCC------------------------------CCCChhhhccchhhhhh
Q 039097          234 ---PNFCINCVCPGYVKTEMTYNA------------------------------GRLTVEEGAESPVWLAL  271 (290)
Q Consensus       234 ---~~i~vn~v~PG~v~T~~~~~~------------------------------~~~~~e~~a~~~~~l~~  271 (290)
                         .++|++.++||++.|++....                              ...+++++|+.++..+.
T Consensus       181 ~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dva~~i~~~~~  251 (287)
T PRK06194        181 LVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEVAQLVFDAIR  251 (287)
T ss_pred             hcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHHHHHHHHHHH
Confidence               269999999999999985432                              12477888888877654

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-33  Score=248.96  Aligned_cols=225  Identities=26%  Similarity=0.281  Sum_probs=188.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +.+++|++|||||++|||.++|++|+++|++|++++|+... .+...+.+.. .+.++.++.+|+++.+++.++++++.+
T Consensus        42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEK-EGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh-cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            46778999999999999999999999999999999998643 3444444433 234688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||........               .+.+.++|.+++++|+.+++.+++++++.|++  .++||++||.
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~---------------~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~  183 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSL---------------EDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSI  183 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCc---------------ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecc
Confidence            999999999999975432111               12388999999999999999999999999863  4799999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           +....|+++|+|++.++++++.++  .+|+|
T Consensus       184 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv  220 (290)
T PRK06701        184 TGYEGN-------------------------------------------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRV  220 (290)
T ss_pred             cccCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            876643                                           345789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++|+||+++|++....                ...+|+++|+.+++++.......+|..+..++.
T Consensus       221 ~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        221 NAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             EEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            9999999999975421                135789999999999998877889999887764

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.9e-33  Score=242.61  Aligned_cols=216  Identities=25%  Similarity=0.296  Sum_probs=177.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |..+++|++|||||+||||+++|++|+++|++|++++|+ .+..++..+++      .+.++.+|+++.+++.+++++  
T Consensus         1 m~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~------~~~~~~~D~~~~~~~~~~~~~--   72 (237)
T PRK12742          1 MGAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET------GATAVQTDSADRDAVIDVVRK--   72 (237)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh------CCeEEecCCCCHHHHHHHHHH--
Confidence            788999999999999999999999999999999988764 33333332222      256788999999998887754  


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                        ++++|++|||||.....+..                +.+.++|++++++|+.+++.+++.+++.|+  ..++||++||
T Consensus        73 --~~~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS  132 (237)
T PRK12742         73 --SGALDILVVNAGIAVFGDAL----------------ELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGS  132 (237)
T ss_pred             --hCCCcEEEECCCCCCCCCcc----------------cCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEec
Confidence              57899999999986433322                237899999999999999999999999986  3589999999


Q ss_pred             CCCcc-cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          160 SLGKL-MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       160 ~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      ..+.. +.                                           ++...|+++|++++.++++++.++  .+|
T Consensus       133 ~~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~~~~~~gi  169 (237)
T PRK12742        133 VNGDRMPV-------------------------------------------AGMAAYAASKSALQGMARGLARDFGPRGI  169 (237)
T ss_pred             cccccCCC-------------------------------------------CCCcchHHhHHHHHHHHHHHHHHHhhhCe
Confidence            87642 21                                           456789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+++|++....              ...+|+++++.+.++++......+|..+..++.
T Consensus       170 ~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~dgg  234 (237)
T PRK12742        170 TINVVQPGPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGA  234 (237)
T ss_pred             EEEEEecCcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCEEEeCCC
Confidence            999999999999985432              135899999999999998888899999988875

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-33  Score=243.17  Aligned_cols=225  Identities=26%  Similarity=0.287  Sum_probs=193.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+|+||++++++|+++|++|++++|++.+.++..+.+..  +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999998877776666654  3468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||........               .+.+.+++++.+++|+.+++.+++.+++.|+++..++||++||..+
T Consensus        80 ~~~d~vi~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  144 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPL---------------LDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAG  144 (251)
T ss_pred             CCCCEEEECCCCCCCCCCh---------------hhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence            9999999999975432211               1237899999999999999999999999998887899999999887


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+.+|++++.+++.++.++  .+++|++
T Consensus       145 ~~~~-------------------------------------------~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~  181 (251)
T PRK07231        145 LRPR-------------------------------------------PGLGWYNASKGAVITLTKALAAELGPDKIRVNA  181 (251)
T ss_pred             cCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            6543                                           456789999999999999999998  3899999


Q ss_pred             eecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++||++.|++....                   ...+|+++|+.+++++.......+|+++..++.
T Consensus       182 i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg  247 (251)
T PRK07231        182 VAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGVTLVVDGG  247 (251)
T ss_pred             EEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCCeEEECCC
Confidence            99999999975432                   124789999999999987777888999888764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-33  Score=244.40  Aligned_cols=223  Identities=17%  Similarity=0.183  Sum_probs=188.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +|++|||||+++||.++|++|+++|++|++++|+....++..+++....+ .++.++.||+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            78999999999999999999999999999999998877777776655433 46899999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGK  163 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~  163 (290)
                      +|++|||||.....+..                +.+.++|++.+++|+.+++++++++++.|++++ .++||++||..+.
T Consensus        82 id~vv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~  145 (259)
T PRK12384         82 VDLLVYNAGIAKAAFIT----------------DFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK  145 (259)
T ss_pred             CCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc
Confidence            99999999976544333                238899999999999999999999999998765 5899999998766


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           +....|++||+|+++++++++.++  .+|+||+|
T Consensus       146 ~~~-------------------------------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v  182 (259)
T PRK12384        146 VGS-------------------------------------------KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSL  182 (259)
T ss_pred             cCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEE
Confidence            543                                           345789999999999999999997  58999999


Q ss_pred             eccee-ecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYV-KTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v-~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .||++ .|++....                          ....|+|+++.++++++......+|+.+..++.
T Consensus       183 ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        183 MLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             ecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence            99975 66654211                          124789999999999887666788998777664

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3.4e-33  Score=243.44  Aligned_cols=222  Identities=25%  Similarity=0.307  Sum_probs=192.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++||||+|+||.+++++|+++|++|++++|+...+++..+++... +.++.++.+|+++++++.++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA-GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999987777766666543 34688999999999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~~~  165 (290)
                      +||||||.....+..                +.+.++|++++++|+.+++.+++.+++.|++.+ +++||++||..+..+
T Consensus        80 ~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~  143 (254)
T TIGR02415        80 VMVNNAGVAPITPIL----------------EITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEG  143 (254)
T ss_pred             EEEECCCcCCCCCcc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCC
Confidence            999999986443332                238899999999999999999999999998764 479999999887765


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           +....|+++|++++++++.++.++  .+++|++|+|
T Consensus       144 ~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P  180 (254)
T TIGR02415       144 N-------------------------------------------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP  180 (254)
T ss_pred             C-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEec
Confidence            4                                           456889999999999999999998  4899999999


Q ss_pred             ceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          244 GYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       244 G~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+++|++++..                          ...+|+++++.+.+++.......+|.++..++..
T Consensus       181 g~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g~  251 (254)
T TIGR02415       181 GIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDYITGQSILVDGGM  251 (254)
T ss_pred             CcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCCccCcEEEecCCc
Confidence            99999985431                          1458899999999999988888999999988764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-33  Score=249.16  Aligned_cols=215  Identities=24%  Similarity=0.290  Sum_probs=181.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..+++|+++||||+||||+++|++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|.+++.++++++.+.
T Consensus        36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAG-GDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999888877777775543 35788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..+.              ..+.++++..+++|+.+++.++++++|.|++.+.++||++||..
T Consensus       115 ~g~id~li~~AG~~~~~~~~~~--------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  180 (293)
T PRK05866        115 IGGVDILINNAGRSIRRPLAES--------------LDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWG  180 (293)
T ss_pred             cCCCCEEEECCCCCCCcchhhc--------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChh
Confidence            9999999999998654332211              11457889999999999999999999999988889999999975


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +....                                          .++...|++||+|+++++++++.|+  .+|+|+
T Consensus       181 ~~~~~------------------------------------------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~  218 (293)
T PRK05866        181 VLSEA------------------------------------------SPLFSVYNASKAALSAVSRVIETEWGDRGVHST  218 (293)
T ss_pred             hcCCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            43211                                          0345789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC------CCCChhhhccchhhhhhcc
Q 039097          240 CVCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~  273 (290)
                      +|+||+++|++....      +..+||++|+.++..+...
T Consensus       219 ~v~pg~v~T~~~~~~~~~~~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        219 TLYYPLVATPMIAPTKAYDGLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             EEEcCcccCccccccccccCCCCCCHHHHHHHHHHHHhcC
Confidence            999999999997642      3469999999888777643

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=244.43  Aligned_cols=210  Identities=21%  Similarity=0.221  Sum_probs=177.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++|+++||||++|||+++|++|+++| ++|++++|++++ +++..++++..+..+++++++|++|.+++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            47899999999999999999999995 899999999886 77777777765544789999999999999999999886 4


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||+|........                ..+.++..+.+++|+.+++.+++.++|.|++++.++||++||..+
T Consensus        86 g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g  149 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAEEL----------------WQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAG  149 (253)
T ss_pred             CCCCEEEEeeecCCchhhc----------------ccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhh
Confidence            8999999999985332111                014456678899999999999999999999888899999999977


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++.+++++++.|+  .+++|+.
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~  186 (253)
T PRK07904        150 ERVR-------------------------------------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLV  186 (253)
T ss_pred             cCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEE
Confidence            5432                                           345689999999999999999998  4899999


Q ss_pred             eecceeecCcccCCC----CCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYNAG----RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~~~----~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+||++.|++.....    ..+||++|+.++..+...+
T Consensus       187 v~Pg~v~t~~~~~~~~~~~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        187 VRPGQVRTRMSAHAKEAPLTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             EeeCceecchhccCCCCCCCCCHHHHHHHHHHHHHcCC
Confidence            999999999876542    3689999999999887655

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.7e-33  Score=246.48  Aligned_cols=233  Identities=20%  Similarity=0.213  Sum_probs=179.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHH----HHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAI----HSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v----~~~~~~~~~~   81 (290)
                      ++++||||++|||++++++|+++|++|++++|+ ++++++..+++....+.++.++.+|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998754 55666666666544444677899999999866    4556666667


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------CCCeEE
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSARIV  155 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~~~~iV  155 (290)
                      ++++|+||||||...+.+..+...     ...........++|.+++++|+.+++.+++++.|+|++.      ..++||
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  156 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDA-----GEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIV  156 (267)
T ss_pred             cCCceEEEECCccCCCCccccccc-----ccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEE
Confidence            899999999999865443322100     000011111235689999999999999999999998643      246899


Q ss_pred             EEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--
Q 039097          156 NVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--  233 (290)
Q Consensus       156 ~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--  233 (290)
                      +++|..+..+.                                           ++..+|++||+|+++++++|+.|+  
T Consensus       157 ~~~s~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~  193 (267)
T TIGR02685       157 NLCDAMTDQPL-------------------------------------------LGFTMYTMAKHALEGLTRSAALELAP  193 (267)
T ss_pred             EehhhhccCCC-------------------------------------------cccchhHHHHHHHHHHHHHHHHHHhh
Confidence            99998776543                                           456789999999999999999998  


Q ss_pred             CCeEEEEeecceeecCcc--cC--------C----CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 PNFCINCVCPGYVKTEMT--YN--------A----GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~--~~--------~----~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .+|+||+|+||++.|+..  ..        .    ...+|+++++.++++++......+|+++..++.
T Consensus       194 ~gi~v~~v~PG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg  261 (267)
T TIGR02685       194 LQIRVNGVAPGLSLLPDAMPFEVQEDYRRKVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGG  261 (267)
T ss_pred             hCeEEEEEecCCccCccccchhHHHHHHHhCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCc
Confidence            589999999999876522  11        0    235899999999999998888899999988765

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-33  Score=244.36  Aligned_cols=224  Identities=24%  Similarity=0.271  Sum_probs=189.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|+++||||++|||+++|++|+++|++|++++|+++..++..+++...+ .++.++.+|++++++++++++++.+.+
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLG-RRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhC-CceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999887777766665433 458899999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|++|||||.... .+..                +.+.++|++++++|+.+++.+++++.+.|++.. ++||++||..
T Consensus        81 g~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~ii~~sS~~  143 (258)
T PRK07890         81 GRVDALVNNAFRVPSMKPLA----------------DADFAHWRAVIELNVLGTLRLTQAFTPALAESG-GSIVMINSMV  143 (258)
T ss_pred             CCccEEEECCccCCCCCCcc----------------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CEEEEEechh
Confidence            999999999997543 2221                237899999999999999999999999987654 7999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.++++++.++  .+|+||
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~  180 (258)
T PRK07890        144 LRHSQ-------------------------------------------PKYGAYKMAKGALLAASQSLATELGPQGIRVN  180 (258)
T ss_pred             hccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            65543                                           456789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++||++.|++....                          ...+|+|+++.+++++.......+|+.+..++.
T Consensus       181 ~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg  254 (258)
T PRK07890        181 SVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLARAITGQTLDVNCG  254 (258)
T ss_pred             EEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence            999999999864310                          123789999999999887666788988766654

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-33  Score=241.84  Aligned_cols=227  Identities=29%  Similarity=0.334  Sum_probs=190.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||+|+||++++++|+++|++|++++|++...+...+++.... ..+.++.+|+++.++++++++++.+
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADG-GTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999877766666665433 3577899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+.......             ...+.+.+++++.+++|+.+++++++.++|.|.+.+.++||++||.
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~-------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  146 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLD-------------LLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSST  146 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCC-------------ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecc
Confidence            999999999999986421110             1123378999999999999999999999999987777899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+                                              ...|++||++++.++++++.++  .++++
T Consensus       147 ~~~~~----------------------------------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v  180 (250)
T PRK07774        147 AAWLY----------------------------------------------SNFYGLAKVGLNGLTQQLARELGGMNIRV  180 (250)
T ss_pred             cccCC----------------------------------------------ccccHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            76432                                              3679999999999999999998  48999


Q ss_pred             EEeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.++||++.|++.....                ..+|+++++.+++++..+.....|+.|..++.
T Consensus       181 ~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        181 NAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWITGQIFNVDGG  245 (250)
T ss_pred             EEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcCCCEEEECCC
Confidence            99999999999865421                23789999999888876555567888777654

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=4.9e-33  Score=251.34  Aligned_cols=259  Identities=22%  Similarity=0.233  Sum_probs=189.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..+++|+++||||++|||++++++|+++|++|++++|+..+.++..+++... +.++.++.+|+++.++++++++++.+
T Consensus         1 m~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          1 MSQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP-PDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            77889999999999999999999999999999999999988887777776432 34688999999999999999999888


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC--CeEEEEc
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS--ARIVNVS  158 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~--~~iV~is  158 (290)
                      .++++|+||||||+.......               .+.+.++++.++++|+.|++++++.++|.|++...  ++||++|
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~---------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs  144 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKE---------------PLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG  144 (322)
T ss_pred             hCCCccEEEECCcccCCCCCC---------------CCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence            778899999999986432111               12378999999999999999999999999987653  6999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCC-CCCchhhhhhHHHHHHHHHHHHhhC---C
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGW-PANAAAYILSKAAMNAYTRILAKKY---P  234 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sKaa~~~~~~~la~e~---~  234 (290)
                      |..........     ....+......+...    +...+..+....... ..+...|+.||++.+.+++.++.++   .
T Consensus       145 S~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~  215 (322)
T PRK07453        145 TVTANPKELGG-----KIPIPAPADLGDLSG----FEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHEST  215 (322)
T ss_pred             ccccCccccCC-----ccCCCCccchhhhhc----chhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccC
Confidence            98654321000     000000000000000    000000010000000 1235789999999999999999998   3


Q ss_pred             CeEEEEeeccee-ecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeec
Q 039097          235 NFCINCVCPGYV-KTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       235 ~i~vn~v~PG~v-~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      +|+|++++||+| .|++.+..+                 ..++++.++.+++++..+....+|.||.+
T Consensus       216 gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~  283 (322)
T PRK07453        216 GITFSSLYPGCVADTPLFRNTPPLFQKLFPWFQKNITGGYVSQELAGERVAQVVADPEFAQSGVHWSW  283 (322)
T ss_pred             CeEEEEecCCcccCCcccccCCHHHHHHHHHHHHHHhhceecHHHHhhHHHHhhcCcccCCCCceeec
Confidence            799999999999 588865521                 24677888888888887876689999974

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.8e-33  Score=241.16  Aligned_cols=226  Identities=28%  Similarity=0.391  Sum_probs=188.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|+++||||++|||.++|++|+++|++|+++.+ +++..++..+.+...+ .++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   79 (247)
T PRK12935          1 MVQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEG-HDVYAVQADVSKVEDANRLVEEAV   79 (247)
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHH
Confidence            77899999999999999999999999999999987755 4455555555555433 468999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|++|||||........                +.+.+.+++.+++|+.+++.+++.++|.|.+...++||++||
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         80 NHFGKVDILVNNAGITRDRTFK----------------KLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             HHcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence            9999999999999986443222                237899999999999999999999999998777789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+++|+|+++++++++.++  .+++
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~  180 (247)
T PRK12935        144 IIGQAGG-------------------------------------------FGQTNYSAAKAGMLGFTKSLALELAKTNVT  180 (247)
T ss_pred             hhhcCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCcE
Confidence            8876543                                           456789999999999999999998  5899


Q ss_pred             EEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++.++||++.|++....               ....|||+++.+++++... ...+|..+..++.
T Consensus       181 v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~~-~~~~g~~~~i~~g  244 (247)
T PRK12935        181 VNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRDG-AYITGQQLNINGG  244 (247)
T ss_pred             EEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCcc-cCccCCEEEeCCC
Confidence            99999999999875543               1358999999999988643 3567777776654

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-33  Score=239.75  Aligned_cols=224  Identities=30%  Similarity=0.380  Sum_probs=187.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|+++||||++|||+++|++|+++|++|+++.|+.. ...+..+++... +.++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA-GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999988877643 344455555443 34689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|++|||||.....+..                +.+.++|++++++|+.+++.+++.+++.|++  .++||++||.
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~  141 (245)
T PRK12937         80 AFGRIDVLVNNAGVMPLGTIA----------------DFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTS  141 (245)
T ss_pred             HcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeec
Confidence            999999999999986433322                2378999999999999999999999999864  4799999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.++++++.++  .++++
T Consensus       142 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v  178 (245)
T PRK12937        142 VIALPL-------------------------------------------PGYGPYAASKAAVEGLVHVLANELRGRGITV  178 (245)
T ss_pred             cccCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            765543                                           456789999999999999999998  58999


Q ss_pred             EEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.++||++.|++....                ...+|+++++.+++++..+....+|.++..++.
T Consensus       179 ~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  243 (245)
T PRK12937        179 NAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNGG  243 (245)
T ss_pred             EEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEEEeCCC
Confidence            9999999999984321                234889999999999988778889999988764

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-33  Score=244.17  Aligned_cols=209  Identities=23%  Similarity=0.299  Sum_probs=178.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|+++||||++|||++++++|+++|++|++++|+.+++++..+++...+  ++.++.+|+++.+++.++++++.++++++
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA--RVSVYAADVRDADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC--eeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999999999999999877766665554322  68899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |++|||||.........               +.+.+++++++++|+.+++++++.++|.|++++.++||++||..+..+
T Consensus        80 d~lv~~ag~~~~~~~~~---------------~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~  144 (257)
T PRK07024         80 DVVIANAGISVGTLTEE---------------REDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRG  144 (257)
T ss_pred             CEEEECCCcCCCccccc---------------cCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC
Confidence            99999999864322111               137899999999999999999999999998888899999999988765


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           +....|++||++++.++++++.|+  .+++|++|+|
T Consensus       145 ~-------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~P  181 (257)
T PRK07024        145 L-------------------------------------------PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAP  181 (257)
T ss_pred             C-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEec
Confidence            4                                           456789999999999999999998  4899999999


Q ss_pred             ceeecCcccCCC-----CCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYNAG-----RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~~~-----~~~~e~~a~~~~~l~~~~~  274 (290)
                      |++.|++.....     ..+|+++++.++..+....
T Consensus       182 g~v~t~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        182 GYIRTPMTAHNPYPMPFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             CCCcCchhhcCCCCCCCccCHHHHHHHHHHHHhCCC
Confidence            999999865432     2589999999988876544

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.6e-33  Score=241.79  Aligned_cols=217  Identities=25%  Similarity=0.256  Sum_probs=186.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+++||++++++|+++|++|++++|+.         +.. .+.++.++++|+++.+++.++++++.+.+
T Consensus         5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (252)
T PRK08220          5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAET   74 (252)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999986         111 13468889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.....+..+                .+.+++++.+++|+.+++.+++.+.+.|+++..++||++||..+
T Consensus        75 ~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~  138 (252)
T PRK08220         75 GPLDVLVNAAGILRMGATDS----------------LSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA  138 (252)
T ss_pred             CCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh
Confidence            99999999999865443322                37899999999999999999999999998877889999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.++++++.++  .+|+||+
T Consensus       139 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~  175 (252)
T PRK08220        139 HVPR-------------------------------------------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNV  175 (252)
T ss_pred             ccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEE
Confidence            5543                                           345789999999999999999998  5899999


Q ss_pred             eecceeecCcccCC-------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +.||++.|++....                         ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       176 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~  248 (252)
T PRK08220        176 VSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDLASHITLQDIVVDGGA  248 (252)
T ss_pred             EecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence            99999999974321                         2357899999999999988788999988877653

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.2e-33  Score=267.97  Aligned_cols=224  Identities=29%  Similarity=0.357  Sum_probs=189.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ..++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++++|++++++++++++++.+.+
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            467999999999999999999999999999999999987777665554    2357889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC-eEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA-RIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~-~iV~isS~~  161 (290)
                      +++|+||||||+..+...              ...+.+.++|++++++|+.+++.++++++|+|++++.+ +||++||..
T Consensus        78 g~iD~li~nag~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~  143 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMT--------------ATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGA  143 (520)
T ss_pred             CCCCEEEECCCcCCCCCc--------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcc
Confidence            999999999997432100              11234889999999999999999999999999776555 999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|+|+++++++++.|+  .+|+||
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~  180 (520)
T PRK06484        144 GLVAL-------------------------------------------PKRTAYSASKAAVISLTRSLACEWAAKGIRVN  180 (520)
T ss_pred             cCCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            87654                                           456789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+++|++....                  ...+|+++++.+++++.......+|+++..++.
T Consensus       181 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G~~~~~~gg  246 (520)
T PRK06484        181 AVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGSTLVVDGG  246 (520)
T ss_pred             EEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCceEEecCC
Confidence            999999999985421                  124899999999999988777888888776653

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-33  Score=239.25  Aligned_cols=215  Identities=26%  Similarity=0.326  Sum_probs=185.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..-++|+++||||+++||++++++|+++|++|++++|++++.++..++++..+ .++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   79 (241)
T PRK07454          1 MSLNSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTG-VKAAAYSIDLSNPEAIAPGIAELLE   79 (241)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            555677899999999999999999999999999999999887777766665433 4688899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||.....+..                +.+.+++++++++|+.+++++++.+++.|++.+.++||++||.
T Consensus        80 ~~~~id~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~  143 (241)
T PRK07454         80 QFGCPDVLINNAGMAYTGPLL----------------EMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSI  143 (241)
T ss_pred             HcCCCCEEEECCCccCCCchh----------------hCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccH
Confidence            999999999999976433322                2378999999999999999999999999988777999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.++++++.++  .++++
T Consensus       144 ~~~~~~-------------------------------------------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v  180 (241)
T PRK07454        144 AARNAF-------------------------------------------PQWGAYCVSKAALAAFTKCLAEEERSHGIRV  180 (241)
T ss_pred             HhCcCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEE
Confidence            776543                                           456789999999999999999998  48999


Q ss_pred             EEeecceeecCcccC---------CCCCChhhhccchhhhhhccCC
Q 039097          239 NCVCPGYVKTEMTYN---------AGRLTVEEGAESPVWLALLHKG  275 (290)
Q Consensus       239 n~v~PG~v~T~~~~~---------~~~~~~e~~a~~~~~l~~~~~~  275 (290)
                      ++|.||++.|++...         .+..+|+++|+.+++++..+..
T Consensus       181 ~~i~pg~i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        181 CTITLGAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             EEEecCcccCCcccccccccccccccCCCHHHHHHHHHHHHcCCcc
Confidence            999999999998542         1246899999999999987754

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-33  Score=241.78  Aligned_cols=228  Identities=25%  Similarity=0.279  Sum_probs=193.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |..+++|+++||||+++||+.++++|+++|++ |++++|+.++..+..+++... +.++.++.+|+++++++.++++++.
T Consensus         1 ~~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   79 (260)
T PRK06198          1 MGRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL-GAKAVFVQADLSDVEDCRRVVAAAD   79 (260)
T ss_pred             CCCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc-CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            77899999999999999999999999999998 999999987777666666433 3468889999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~is  158 (290)
                      ++++++|++|||||.....+..                +.+.+.|++++++|+.+++.+++.++++|.++. .+++|++|
T Consensus        80 ~~~g~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s  143 (260)
T PRK06198         80 EAFGRLDALVNAAGLTDRGTIL----------------DTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIG  143 (260)
T ss_pred             HHhCCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEEC
Confidence            9999999999999976433222                238899999999999999999999999997653 48999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|+++|+++++++++++.++  .++
T Consensus       144 s~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i  180 (260)
T PRK06198        144 SMSAHGGQ-------------------------------------------PFLAAYCASKGALATLTRNAAYALLRNRI  180 (260)
T ss_pred             CcccccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCe
Confidence            99876543                                           445789999999999999999998  589


Q ss_pred             EEEEeecceeecCcccC----------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYN----------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~----------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|++++||++.|++...                      ....+++++++.+++++.......+|+++..++..
T Consensus       181 ~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        181 RVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             EEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence            99999999999986311                      01248999999999999888778999999887753

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-33  Score=239.14  Aligned_cols=211  Identities=18%  Similarity=0.147  Sum_probs=173.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++||||++|||+++|++|+++|++|++.+|+.+++++..+++      .+.++++|+++.++++++++++.+   ++|+
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~~~---~id~   72 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL------DVDAIVCDNTDPASLEEARGLFPH---HLDT   72 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc------cCcEEecCCCCHHHHHHHHHHHhh---cCcE
Confidence            5899999999999999999999999999999987766655543      256789999999999999887753   6999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      +|||||.........          .....+ +.++|++++++|+.++++++++++|.|++  .|+||++||...     
T Consensus        73 lv~~ag~~~~~~~~~----------~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~-----  134 (223)
T PRK05884         73 IVNVPAPSWDAGDPR----------TYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP-----  134 (223)
T ss_pred             EEECCCccccCCCCc----------ccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC-----
Confidence            999998642111000          000112 56899999999999999999999999974  489999999751     


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecce
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGY  245 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG~  245 (290)
                                                                +....|++||+|+.+|+++++.|+  .+|+||+|+||+
T Consensus       135 ------------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~  172 (223)
T PRK05884        135 ------------------------------------------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGR  172 (223)
T ss_pred             ------------------------------------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCc
Confidence                                                      234789999999999999999998  489999999999


Q ss_pred             eecCcccCC---CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          246 VKTEMTYNA---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       246 v~T~~~~~~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++|++....   +..+|+|+++.+.|+++......+|+.+..++.
T Consensus       173 v~t~~~~~~~~~p~~~~~~ia~~~~~l~s~~~~~v~G~~i~vdgg  217 (223)
T PRK05884        173 SVQPGYDGLSRTPPPVAAEIARLALFLTTPAARHITGQTLHVSHG  217 (223)
T ss_pred             cCchhhhhccCCCCCCHHHHHHHHHHHcCchhhccCCcEEEeCCC
Confidence            999975432   334889999999999998888999999988775

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-32  Score=241.30  Aligned_cols=230  Identities=28%  Similarity=0.346  Sum_probs=191.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+|+||+++|++|+++|++|++++|+.++.+...+++...+ .++.++.||++|.++++++++++.+.+
T Consensus         9 ~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~-~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          9 DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-IDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999877777666665433 457889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchh-hccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL-LQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~-l~~~~~~~iV~isS~~  161 (290)
                      +++|++|||||.....+..+                .+.+.|++++++|+.+++.+++++.++ |.+++.++||++||..
T Consensus        88 ~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~  151 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAED----------------HPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVA  151 (259)
T ss_pred             CCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChh
Confidence            99999999999764433222                378999999999999999999999998 7766678999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+...                                      . ..+...|+++|++++.++++++.++  .++++|
T Consensus       152 ~~~~~~~--------------------------------------~-~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~  192 (259)
T PRK08213        152 GLGGNPP--------------------------------------E-VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVN  192 (259)
T ss_pred             hccCCCc--------------------------------------c-ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEE
Confidence            6553200                                      0 0234789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      .|+||++.|++....               ...+|+++++...+++.......+|+.+..++..
T Consensus       193 ~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~~~  256 (259)
T PRK08213        193 AIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITGQILAVDGGV  256 (259)
T ss_pred             EEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            999999999975432               1236899999999999888888999999887653

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.9e-33  Score=269.22  Aligned_cols=212  Identities=27%  Similarity=0.350  Sum_probs=185.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++++++|||||+||||+++|++|+++|++|++++|+.+++++..++++..+ .++.++.||++|.+++.++++++.+.+
T Consensus       312 ~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG-AVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             cCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4678899999999999999999999999999999999888888777776544 368899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~  161 (290)
                      +++|+||||||+....+..+                .+.+++++++++|+.|++++++.++|.|++++ .|+||++||..
T Consensus       391 g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~  454 (582)
T PRK05855        391 GVPDIVVNNAGIGMAGGFLD----------------TSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAA  454 (582)
T ss_pred             CCCcEEEECCccCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            99999999999875444332                38899999999999999999999999998765 48999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .||+|+
T Consensus       455 ~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~  491 (582)
T PRK05855        455 AYAPS-------------------------------------------RSLPAYATSKAAVLMLSECLRAELAAAGIGVT  491 (582)
T ss_pred             hccCC-------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            87654                                           556899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccC
Q 039097          240 CVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +|+||+|+|+|.+..                       ...+||++|+.+++.+....
T Consensus       492 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        492 AICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             EEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcCC
Confidence            999999999886542                       12489999999999987654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.4e-32  Score=239.06  Aligned_cols=227  Identities=30%  Similarity=0.369  Sum_probs=193.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC--CHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA--DPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~   80 (290)
                      .+++|+++||||+++||.+++++|+++|++|++++|+.++.++..+++......++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999999888777777777665556778888886  78999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||........               .+.+.+.|++.+++|+.+++++++.++++|++++.++||++||.
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~  153 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPM---------------EQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSS  153 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCc---------------ccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccH
Confidence            999999999999986432111               12378999999999999999999999999998888999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||++++.+++.++.++  .++++
T Consensus       154 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~  190 (247)
T PRK08945        154 VGRQGR-------------------------------------------ANWGAYAVSKFATEGMMQVLADEYQGTNLRV  190 (247)
T ss_pred             hhcCCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhcccCEEE
Confidence            776543                                           456789999999999999999988  48999


Q ss_pred             EEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++++||++.|++....       ...+|+++++.++++++......+|+.+....+
T Consensus       191 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~  246 (247)
T PRK08945        191 NCINPGGTRTAMRASAFPGEDPQKLKTPEDIMPLYLYLMGDDSRRKNGQSFDAQPG  246 (247)
T ss_pred             EEEecCCccCcchhhhcCcccccCCCCHHHHHHHHHHHhCccccccCCeEEeCCCC
Confidence            9999999999874321       246889999999999988888899999876543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=9.8e-33  Score=239.88  Aligned_cols=224  Identities=21%  Similarity=0.311  Sum_probs=192.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++|++|||||+|+||++++++|+++|++|++++|+.++.++..+.+.... .++.++.+|+++.++++++++.+.+.++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKG-GNAQAFACDITDRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999877777666665433 4588999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||.....+...                .+.+++++.+++|+.+++++++.+.+.|++.+.++||++||..+.
T Consensus        80 ~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~  143 (250)
T TIGR03206        80 PVDVLVNNAGWDKFGPFTK----------------TEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR  143 (250)
T ss_pred             CCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc
Confidence            9999999999864333322                278899999999999999999999999988877899999998876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|+++|+|++.++++++.++  .+++++.+
T Consensus       144 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v  180 (250)
T TIGR03206       144 VGS-------------------------------------------SGEAVYAACKGGLVAFSKTMAREHARHGITVNVV  180 (250)
T ss_pred             cCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEE
Confidence            543                                           455789999999999999999998  48999999


Q ss_pred             ecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||++.|++....                     ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       181 ~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       181 CPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             ecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence            9999999964321                     124799999999999998888889999888764

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=239.90  Aligned_cols=225  Identities=31%  Similarity=0.437  Sum_probs=194.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+|+||+++|++|+++|++|++++|++++.++..+++...+ .++.++.||+++.+++.++++.+.+.+
T Consensus         1 ~~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          1 MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAG-GKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999999888777777765533 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +.+|++|||||........+                .+.+++++++++|+.+++.+++.+++.|++++.++||++||..+
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~  143 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIED----------------FPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHG  143 (258)
T ss_pred             CCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhh
Confidence            99999999999865443322                37889999999999999999999999999888899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.+++.++.++  .+|+|++
T Consensus       144 ~~~~-------------------------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~  180 (258)
T PRK12429        144 LVGS-------------------------------------------AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNA  180 (258)
T ss_pred             ccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            7654                                           456889999999999999999998  5899999


Q ss_pred             eecceeecCcccC---------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYN---------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~---------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++||++.|++...                           ....+++|+|+.+++++.......+|+.+..++.
T Consensus       181 ~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        181 ICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             EecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            9999999987431                           1245799999999999887766778998887765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=238.16  Aligned_cols=224  Identities=29%  Similarity=0.350  Sum_probs=185.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++|||||++|||.++|+.|+++|++|+++. |+++..++..+++.... .++.+++||+++.++++++++++.+.+++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAG-GRACVVAGDVANEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999998765 56565666666665433 46889999999999999999999998999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEEEcCCC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVNVSSSL  161 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~isS~~  161 (290)
                      +|++|||||........               .+.+.+++++.+++|+.+++.+++.+++.+..+.   .++||++||..
T Consensus        81 id~li~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~  145 (248)
T PRK06947         81 LDALVNNAGIVAPSMPL---------------ADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIA  145 (248)
T ss_pred             CCEEEECCccCCCCCCh---------------hhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence            99999999986432111               1237899999999999999999999999886543   57899999988


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                          +.+...|++||+++++++++++.++  .+++|+
T Consensus       146 ~~~~~------------------------------------------~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~  183 (248)
T PRK06947        146 SRLGS------------------------------------------PNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVN  183 (248)
T ss_pred             hcCCC------------------------------------------CCCCcccHhhHHHHHHHHHHHHHHhhhhCcEEE
Confidence            76543                                          1234679999999999999999998  489999


Q ss_pred             EeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++||+++|++....                ...+||++++.+++++..+....+|+++..++.
T Consensus       184 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        184 AVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGALLDVGGG  247 (248)
T ss_pred             EEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCceEeeCCC
Confidence            999999999985421                135889999999999998888899999988764

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-33  Score=245.67  Aligned_cols=204  Identities=25%  Similarity=0.310  Sum_probs=173.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc-C
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF-G   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   83 (290)
                      ++|+++||||+||||+++|++|+++|++|++++|+++.+++..    ..   .+.++.+|++|.+++.++++++.+.+ +
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~---~~~~~~~Dl~d~~~~~~~~~~~~~~~~g   75 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE---GLEAFQLDYAEPESIAALVAQVLELSGG   75 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC---CceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999976654432    21   37788999999999999999997766 6


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||+....+..+                .+.+++++++++|+.|++.+++.++|.|++++.++||++||..+.
T Consensus        76 ~id~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~  139 (277)
T PRK05993         76 RLDALFNNGAYGQPGAVED----------------LPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGL  139 (277)
T ss_pred             CccEEEECCCcCCCCCccc----------------CCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhc
Confidence            8999999999865544332                388999999999999999999999999998888999999998876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|++||+++++++++|+.|+  .+|+|++|
T Consensus       140 ~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v  176 (277)
T PRK05993        140 VPM-------------------------------------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLI  176 (277)
T ss_pred             CCC-------------------------------------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEE
Confidence            543                                           456789999999999999999998  48999999


Q ss_pred             ecceeecCcccCC----------------------------------CCCChhhhccchhhhhhccC
Q 039097          242 CPGYVKTEMTYNA----------------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       242 ~PG~v~T~~~~~~----------------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +||++.|++....                                  ...+||++++.++..+....
T Consensus       177 ~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~~~~~  243 (277)
T PRK05993        177 EPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHALTAPR  243 (277)
T ss_pred             ecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHcCCC
Confidence            9999999986421                                  12578999998888776543

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-33  Score=241.20  Aligned_cols=224  Identities=25%  Similarity=0.353  Sum_probs=187.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..|++|+++||||+||||.+++++|+++|++|++++|+....++..+++.      ..++++|++++++++++++++.+.
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG------GLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC------CcEEEeeCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998776655544442      257899999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||...+...              ...+.+.+.|++.+++|+.+++++++.++|+|+++..++||++||..
T Consensus        77 ~~~id~vi~~ag~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~  142 (255)
T PRK06057         77 YGSVDIAFNNAGISPPEDD--------------SILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFV  142 (255)
T ss_pred             cCCCCEEEECCCcCCCCCC--------------CcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchh
Confidence            9999999999997642211              01233789999999999999999999999999877778999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                          +++...|+++|++++.+++.++.++  .+++|+
T Consensus       143 ~~~g~------------------------------------------~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~  180 (255)
T PRK06057        143 AVMGS------------------------------------------ATSQISYTASKGGVLAMSRELGVQFARQGIRVN  180 (255)
T ss_pred             hccCC------------------------------------------CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEE
Confidence            65532                                          1245689999999999999999998  489999


Q ss_pred             EeecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                  ...+|+++++.+.+++.+.....+|..+..++.
T Consensus       181 ~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~~g  246 (255)
T PRK06057        181 ALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFITASTFLVDGG  246 (255)
T ss_pred             EEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence            999999999975421                  135789999999999988888888888777664

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=238.30  Aligned_cols=225  Identities=24%  Similarity=0.270  Sum_probs=183.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |++.++|++|||||++|||++++++|+++|++|++++++ .+..+...+++...+ .++.++.+|++|.+++.++++++.
T Consensus         4 ~~~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~~   82 (258)
T PRK09134          4 MSMAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALG-RRAVALQADLADEAEVRALVARAS   82 (258)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHH
Confidence            456779999999999999999999999999999887764 444555555554433 458899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|+||||||.....+..                +.+.++|++++++|+.+++.+++++.+.|++...++||+++|
T Consensus        83 ~~~~~iD~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s  146 (258)
T PRK09134         83 AALGPITLLVNNASLFEYDSAA----------------SFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMID  146 (258)
T ss_pred             HHcCCCCEEEECCcCCCCCccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECc
Confidence            9999999999999986543332                238899999999999999999999999998777789999988


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~v  238 (290)
                      ..+..+.                                           +....|++||+++++++++++.++ ++++|
T Consensus       147 ~~~~~~~-------------------------------------------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v  183 (258)
T PRK09134        147 QRVWNLN-------------------------------------------PDFLSYTLSKAALWTATRTLAQALAPRIRV  183 (258)
T ss_pred             hhhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEE
Confidence            7554322                                           345689999999999999999998 46999


Q ss_pred             EEeecceeecCcccC-------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYN-------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~-------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|+....             ....+++++|+.+++++..+  ..+|+.+..++.
T Consensus       184 ~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~--~~~g~~~~i~gg  243 (258)
T PRK09134        184 NAIGPGPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP--SVTGQMIAVDGG  243 (258)
T ss_pred             EEeecccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC--CcCCCEEEECCC
Confidence            999999998865321             11357899999999998754  478888777664

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=5.8e-33  Score=225.82  Aligned_cols=186  Identities=26%  Similarity=0.383  Sum_probs=166.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++.|.++|||||++|||+++|++|.+.|-.||+++|+...++++.++..     .+....||+.|.++++++++++.++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p-----~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP-----EIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc-----chheeeecccchhhHHHHHHHHHhh
Confidence            46789999999999999999999999999999999999999888887763     4778999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      |+.+++||||||+........              .+.+.++.++.+.+|+.+|..+++.++|++.+++.+.||+|||..
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~--------------~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGL  141 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTG--------------AEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGL  141 (245)
T ss_pred             CCchheeeecccccchhhccC--------------CcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEecccc
Confidence            999999999999985433221              234788899999999999999999999999999989999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC--CeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~i~vn  239 (290)
                      +..+.                                           ...+.||++|+|++.++.+|...++  +|.|-
T Consensus       142 afvPm-------------------------------------------~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVI  178 (245)
T COG3967         142 AFVPM-------------------------------------------ASTPVYCATKAAIHSYTLALREQLKDTSVEVI  178 (245)
T ss_pred             ccCcc-------------------------------------------cccccchhhHHHHHHHHHHHHHHhhhcceEEE
Confidence            88765                                           3468999999999999999999884  79999


Q ss_pred             EeecceeecC
Q 039097          240 CVCPGYVKTE  249 (290)
Q Consensus       240 ~v~PG~v~T~  249 (290)
                      -+.|-.|+|+
T Consensus       179 E~~PP~V~t~  188 (245)
T COG3967         179 ELAPPLVDTT  188 (245)
T ss_pred             EecCCceecC
Confidence            9999999996

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.5e-32  Score=242.46  Aligned_cols=203  Identities=29%  Similarity=0.331  Sum_probs=173.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |++|+++||||+||||+++|++|+++|++|++++|+.+++++..    .   ..+.++.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S---LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h---CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999999976554332    1   2378899999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||+....+..+                .+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus        74 ~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~  137 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIED----------------VPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGK  137 (273)
T ss_pred             CCCEEEECCCcCCCCchhh----------------CCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhc
Confidence            9999999999865444332                388999999999999999999999999998878899999998765


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           +....|+++|+++++++++++.|+  .+|+|++|
T Consensus       138 ~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v  174 (273)
T PRK06182        138 IYT-------------------------------------------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVI  174 (273)
T ss_pred             CCC-------------------------------------------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEE
Confidence            533                                           344679999999999999999998  48999999


Q ss_pred             ecceeecCcccCC-------------------------------CCCChhhhccchhhhhhc
Q 039097          242 CPGYVKTEMTYNA-------------------------------GRLTVEEGAESPVWLALL  272 (290)
Q Consensus       242 ~PG~v~T~~~~~~-------------------------------~~~~~e~~a~~~~~l~~~  272 (290)
                      +||+++|++....                               ...+|+++|+.+++++..
T Consensus       175 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        175 EPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             ecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            9999999974210                               124889999999999874

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-32  Score=242.08  Aligned_cols=218  Identities=28%  Similarity=0.318  Sum_probs=184.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |++|++|||||+|+||++++++|+++|++|++++|+++++++..+.+    +..+.++++|+++.+++.++++++.+.++
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999977665544332    34578889999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||.....+..+                .+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus        77 ~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~  140 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEE----------------VTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGI  140 (275)
T ss_pred             CCCEEEECCCCcccccccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhc
Confidence            9999999999875544333                388999999999999999999999999988877899999998876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|+++|++++++++.++.++  .+++|+.+
T Consensus       141 ~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v  177 (275)
T PRK08263        141 SAF-------------------------------------------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLV  177 (275)
T ss_pred             CCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEE
Confidence            654                                           455789999999999999999997  48999999


Q ss_pred             ecceeecCcccCC------------------------CC-CChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          242 CPGYVKTEMTYNA------------------------GR-LTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       242 ~PG~v~T~~~~~~------------------------~~-~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .||++.|++....                        .. .+|+++++.++.++..+.  ..++++...+
T Consensus       178 ~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~--~~~~~~~~~~  245 (275)
T PRK08263        178 EPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN--PPLRLFLGSG  245 (275)
T ss_pred             ecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--CCeEEEeCch
Confidence            9999999987310                        12 689999999999987654  5666665443

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-32  Score=239.50  Aligned_cols=221  Identities=21%  Similarity=0.236  Sum_probs=176.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc----cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK----GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++++..    ..++..+++... +.++.++++|++++++++++++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA-GAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh-CCcEEEEecCcCCHHHHHHHHHHH
Confidence            467899999999999999999999999999777765432    233344444333 346888999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE-
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV-  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i-  157 (290)
                      .+.++++|++|||||.....+..+                .+.++|++++++|+.+++.+++++.|+|++  .++++++ 
T Consensus        84 ~~~~~~id~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~  145 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKKPIVE----------------ISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLV  145 (257)
T ss_pred             HHhhCCCCEEEECCcccCCCCccc----------------CCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEe
Confidence            999999999999999865433322                378999999999999999999999999874  3677776 


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+.. .                                           +....|++||+|++.++++++.|+  .+
T Consensus       146 ss~~~~~-~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~  181 (257)
T PRK12744        146 TSLLGAF-T-------------------------------------------PFYSAYAGSKAPVEHFTRAASKEFGARG  181 (257)
T ss_pred             cchhccc-C-------------------------------------------CCcccchhhHHHHHHHHHHHHHHhCcCc
Confidence            4543322 1                                           345789999999999999999998  38


Q ss_pred             eEEEEeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          236 FCINCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++||++.|++....                     +...|+|+++.+.+++.. ....+|+.+..++.
T Consensus       182 i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~~~~g~~~~~~gg  253 (257)
T PRK12744        182 ISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GWWITGQTILINGG  253 (257)
T ss_pred             eEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-cceeecceEeecCC
Confidence            9999999999999865320                     234689999999999885 44678888877764

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.8e-32  Score=236.92  Aligned_cols=219  Identities=24%  Similarity=0.287  Sum_probs=185.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++||||++|||.++|++|+++|++|++++|+ .+..++..++++..+ .++.++++|+++.+++.++++++.+.++++|.
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~   79 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQG-GNARLLQFDVADRVACRTLLEADIAEHGAYYG   79 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-CeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999998875 444555566665443 46899999999999999999999999999999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhc-hhhccCCCCeEEEEcCCCCcccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALI-PLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~-~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||||.....+..+                .+.++|+.++++|+.+++++++.++ |.+++...++||++||..+..+.
T Consensus        80 li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~  143 (239)
T TIGR01831        80 VVLNAGITRDAAFPA----------------LSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN  143 (239)
T ss_pred             EEECCCCCCCCchhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC
Confidence            999999865443222                3789999999999999999999875 55555566899999999877654


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|+++|+++++++++++.++  .+|+||+|+||
T Consensus       144 -------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  180 (239)
T TIGR01831       144 -------------------------------------------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPG  180 (239)
T ss_pred             -------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEc
Confidence                                                       456789999999999999999998  58999999999


Q ss_pred             eeecCcccCCC--------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          245 YVKTEMTYNAG--------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v~T~~~~~~~--------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++|++....+              ..+|+++++.++|+++.+....+|..+..++.
T Consensus       181 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~gg  237 (239)
T TIGR01831       181 LIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG  237 (239)
T ss_pred             cCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecCC
Confidence            99999976421              34899999999999998888999999887764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.4e-32  Score=237.58  Aligned_cols=221  Identities=23%  Similarity=0.246  Sum_probs=187.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++||||++|||++++++|+++|++|++++|+ .+.+++..+++..... ..+..+++|+++.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 6656666666654432 2456789999999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ++|||||.....+..                +.+.+++++++++|+.+++.+++.++|.|++.+.++||++||..+..+.
T Consensus        82 ~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~  145 (251)
T PRK07069         82 VLVNNAGVGSFGAIE----------------QIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE  145 (251)
T ss_pred             EEEECCCcCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC
Confidence            999999986543332                2378999999999999999999999999998777899999999887653


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeEEEEee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVC  242 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~vn~v~  242 (290)
                                                                 ++...|+++|++++.++++++.++    .+++|++|+
T Consensus       146 -------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~  182 (251)
T PRK07069        146 -------------------------------------------PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIH  182 (251)
T ss_pred             -------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEe
Confidence                                                       456789999999999999999997    259999999


Q ss_pred             cceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          243 PGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       243 PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||++.|++....                    ...+|+++++.++++...+....+|+.+..++..
T Consensus       183 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~i~~~~g~  248 (251)
T PRK07069        183 PTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGAELVIDGGI  248 (251)
T ss_pred             ecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCe
Confidence            999999986421                    1247999999999998887788899988877653

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-32  Score=240.38  Aligned_cols=209  Identities=27%  Similarity=0.347  Sum_probs=178.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++||||++|||+++|++|+++|++|++++|+.+..++..+++...+...+.++.+|+++.+++.++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999988777777777655444466789999999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCCCCccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~~g~~~  165 (290)
                      ++|||||.....+..                +.+.+++++.+++|+.+++.+++.++|.|.+. ..++||++||..+..+
T Consensus        81 ~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~  144 (272)
T PRK07832         81 VVMNIAGISAWGTVD----------------RLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA  144 (272)
T ss_pred             EEEECCCCCCCCccc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC
Confidence            999999976443332                23889999999999999999999999999764 3589999999877554


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           +....|+++|+++.+++++++.|+  .+|+|+.|+|
T Consensus       145 ~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~P  181 (272)
T PRK07832        145 L-------------------------------------------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVP  181 (272)
T ss_pred             C-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            3                                           456789999999999999999998  5899999999


Q ss_pred             ceeecCcccCC---------------------CCCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+++|++....                     ...+|+++|+.+++++..++
T Consensus       182 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~~~~~~  233 (272)
T PRK07832        182 GAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAGVEKNR  233 (272)
T ss_pred             CcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHhcCC
Confidence            99999975421                     24799999999999986544

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=238.73  Aligned_cols=211  Identities=25%  Similarity=0.326  Sum_probs=180.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||+||||.+++++|+++|++|++++|+.++.++..+++.  .+.++.++.+|++|.+++.++++.+.+ 
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLP--YPGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            35789999999999999999999999999999999999887777766662  234688999999999999999999876 


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||.....+..                +.+.+++++++++|+.+++++++.++|+|.+++.++||++||..
T Consensus        78 ~~~id~lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  141 (263)
T PRK09072         78 MGGINVLINNAGVNHFALLE----------------DQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTF  141 (263)
T ss_pred             cCCCCEEEECCCCCCccccc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChh
Confidence            78999999999986433332                23789999999999999999999999999887778999999988


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|+++.+++++++.++  .+++|+
T Consensus       142 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~  178 (263)
T PRK09072        142 GSIGY-------------------------------------------PGYASYCASKFALRGFSEALRRELADTGVRVL  178 (263)
T ss_pred             hCcCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            76553                                           456789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC----------CCCChhhhccchhhhhhccC
Q 039097          240 CVCPGYVKTEMTYNA----------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .|+||++.|++....          ...+|+++|+.+++++....
T Consensus       179 ~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        179 YLAPRATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             EEecCcccccchhhhcccccccccCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999975431          34689999999999987543

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-32  Score=239.61  Aligned_cols=226  Identities=19%  Similarity=0.204  Sum_probs=191.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +|++|++|||||+|+||++++++|+++|++|++++|++++.++..+++.... ..++.++.+|+++++++.++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999877777666665443 246888999999999999999999999


Q ss_pred             cCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++++|++|||||.... .+..                +.+.+++..++++|+.+++.+++.+++.|.+.+.++||++||.
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~  147 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPIT----------------QIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSI  147 (276)
T ss_pred             cCCCCEEEECCCcccCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEech
Confidence            9999999999997532 1111                2378899999999999999999999999987777899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.++++++.++  .++++
T Consensus       148 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v  184 (276)
T PRK05875        148 AASNTH-------------------------------------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRV  184 (276)
T ss_pred             hhcCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            775432                                           345789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.|.||+++|++....                 ...+++|+++.+++++..+....+|+++..++.
T Consensus       185 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  250 (276)
T PRK05875        185 NSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITGQVINVDGG  250 (276)
T ss_pred             EEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            9999999999976431                 113679999999999988777778888877654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.7e-32  Score=234.37  Aligned_cols=226  Identities=30%  Similarity=0.377  Sum_probs=195.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|++|||||+|+||.+++++|+++|++|+++ +|++++..+..+.+... +.++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-GGDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999 99888777766666543 34688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|++||+||.....+..                +.+.+++++.+++|+.+++.+++.+.+.+.+.+.+++|++||.
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  143 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVT----------------DMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSI  143 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCH
Confidence            999999999999987432222                2388999999999999999999999999988878899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           +....|+.+|++++.++++++.++  .++++
T Consensus       144 ~~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~  180 (247)
T PRK05565        144 WGLIGA-------------------------------------------SCEVLYSASKGAVNAFTKALAKELAPSGIRV  180 (247)
T ss_pred             hhccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence            776543                                           345789999999999999999998  59999


Q ss_pred             EEeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++++||++.|++.+...               ..+++++++.+++++.......+|+++..++.
T Consensus       181 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~~  244 (247)
T PRK05565        181 NAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQIITVDGG  244 (247)
T ss_pred             EEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEecCC
Confidence            99999999998765421               24789999999999998888999999988764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.9e-32  Score=233.72  Aligned_cols=223  Identities=29%  Similarity=0.312  Sum_probs=186.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||||+++||+++|++|+++|++|++++|+... .++....+. ..+.++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYG-FTEDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhh-ccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3689999999999999999999999999999998542 222222221 12346889999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|++|||||.....+..                +.+.++|++++++|+.+++++++.+++.|++.+.++||++||..+..
T Consensus        81 id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~  144 (245)
T PRK12824         81 VDILVNNAGITRDSVFK----------------RMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLK  144 (245)
T ss_pred             CCEEEECCCCCCCCccc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhcc
Confidence            99999999986443322                23889999999999999999999999999887788999999988765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|+++|+|+++++++++.++  .+++++.+.
T Consensus       145 ~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~  181 (245)
T PRK12824        145 GQ-------------------------------------------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIA  181 (245)
T ss_pred             CC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEE
Confidence            43                                           456789999999999999999988  489999999


Q ss_pred             cceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          243 PGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       243 PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||++.|++.+..               ...+++++++.+.+++.......+|+.+..++..
T Consensus       182 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g~  242 (245)
T PRK12824        182 PGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISINGGL  242 (245)
T ss_pred             EcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEECCCe
Confidence            999999986532               1348899999999998777777899998888764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7e-32  Score=233.33  Aligned_cols=214  Identities=28%  Similarity=0.334  Sum_probs=184.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||+++||++++++|+++|++|++++|++.+.++..+++... +.++.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY-GVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999999988777777777543 34688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|||||........                +.+.+++++.+++|+.+++++++.+.+.+.++..+++|++||.
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  144 (239)
T PRK07666         81 ELGSIDILINNAGISKFGKFL----------------ELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST  144 (239)
T ss_pred             HcCCccEEEEcCccccCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence            999999999999986433322                2378999999999999999999999999988878999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+.+|+++..++++++.++  .++++
T Consensus       145 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v  181 (239)
T PRK07666        145 AGQKGA-------------------------------------------AVTSAYSASKFGVLGLTESLMQEVRKHNIRV  181 (239)
T ss_pred             hhccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEE
Confidence            877654                                           445789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC--------CCCChhhhccchhhhhhccC
Q 039097          239 NCVCPGYVKTEMTYNA--------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~--------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.|.||++.|++....        ...+++++++.++.++..+.
T Consensus       182 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~~~~  225 (239)
T PRK07666        182 TALTPSTVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLKLNK  225 (239)
T ss_pred             EEEecCcccCcchhhccccccCCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999999975432        24688999999999887654

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=238.38  Aligned_cols=208  Identities=24%  Similarity=0.399  Sum_probs=181.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++||||+||||++++++|+++|++|++++|+.+++++..+++...+ .++.++.||+++.+++.++++++.+.++++|
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   79 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAG-GDGFYQRCDVRDYSQLTALAQACEEKWGGID   79 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            479999999999999999999999999999999888888777776543 4588899999999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +||||||........                +.+.++|++++++|+.+++.+++.++|.|++.+.++||++||..+..+.
T Consensus        80 ~lI~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~  143 (270)
T PRK05650         80 VIVNNAGVASGGFFE----------------ELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG  143 (270)
T ss_pred             EEEECCCCCCCCCcc----------------cCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC
Confidence            999999987544333                2388999999999999999999999999988777899999999887654


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|+++|+++++++++++.|+  .+++|+.|+||
T Consensus       144 -------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg  180 (270)
T PRK05650        144 -------------------------------------------PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPS  180 (270)
T ss_pred             -------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecC
Confidence                                                       456899999999999999999998  48999999999


Q ss_pred             eeecCcccCC-----------------CCCChhhhccchhhhhhccC
Q 039097          245 YVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       245 ~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +++|++....                 .+.+++++|+.++..+....
T Consensus       181 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~~  227 (270)
T PRK05650        181 FFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKGE  227 (270)
T ss_pred             ccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCC
Confidence            9999986532                 14688999999988877543

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-32  Score=235.80  Aligned_cols=225  Identities=26%  Similarity=0.388  Sum_probs=185.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|+++||||+||||+++|++|+++|+.|++. .|+.++.++..+++... +.++.++.+|++|.+++.++++++.
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~i~~~~~~~~   79 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-GGKAFLIEADLNSIDGVKKLVEQLK   79 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-CCcEEEEEcCcCCHHHHHHHHHHHH
Confidence            788999999999999999999999999999998775 67776666666655432 2458889999999999999999999


Q ss_pred             hhc------CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCe
Q 039097           80 SHF------GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSAR  153 (290)
Q Consensus        80 ~~~------~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~  153 (290)
                      +++      +++|++|||||.....+..                +.+.+.|++++++|+.+++++++.+++.|++  .++
T Consensus        80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~  141 (254)
T PRK12746         80 NELQIRVGTSEIDILVNNAGIGTQGTIE----------------NTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGR  141 (254)
T ss_pred             HHhccccCCCCccEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCE
Confidence            887      4799999999976543322                2388999999999999999999999999864  379


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      +|++||..+..+.                                           ++...|++||+|++.++++++.++
T Consensus       142 ~v~~sS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~  178 (254)
T PRK12746        142 VINISSAEVRLGF-------------------------------------------TGSIAYGLSKGALNTMTLPLAKHL  178 (254)
T ss_pred             EEEECCHHhcCCC-------------------------------------------CCCcchHhhHHHHHHHHHHHHHHH
Confidence            9999998776543                                           456789999999999999999997


Q ss_pred             --CCeEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 --PNFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                        .+++|+.+.||++.|++....                 ...+++++++.+.++...+....+|..+..++.
T Consensus       179 ~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        179 GERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             hhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence              489999999999999985432                 123789999999888876655678888776654

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-32  Score=239.35  Aligned_cols=208  Identities=24%  Similarity=0.278  Sum_probs=175.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +.+|++|||||+||||++++++|+++|++|++++|++++++...+    ..+.++.++.+|++|.+++.++++++.+.++
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   77 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LHPDRALARLLDVTDFDAIDAVVADAEATFG   77 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hcCCCeeEEEccCCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999999766543322    2334688899999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||.....+..+                .+.++|++++++|+.+++++++.++|+|++...++||++||..+.
T Consensus        78 ~~d~vv~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~  141 (277)
T PRK06180         78 PIDVLVNNAGYGHEGAIEE----------------SPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL  141 (277)
T ss_pred             CCCEEEECCCccCCccccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc
Confidence            9999999999865443332                378999999999999999999999999998877899999999887


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|+++|++++.++++++.++  .+++|++|
T Consensus       142 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i  178 (277)
T PRK06180        142 ITM-------------------------------------------PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAV  178 (277)
T ss_pred             CCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEE
Confidence            654                                           456899999999999999999998  48999999


Q ss_pred             ecceeecCcccC----------------------------CCCCChhhhccchhhhhhccC
Q 039097          242 CPGYVKTEMTYN----------------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       242 ~PG~v~T~~~~~----------------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .||++.|++...                            ....+|+++++.+++++..+.
T Consensus       179 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  239 (277)
T PRK06180        179 EPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESDE  239 (277)
T ss_pred             ecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCCC
Confidence            999999986321                            013478899999888876544

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-32  Score=234.22  Aligned_cols=211  Identities=26%  Similarity=0.305  Sum_probs=180.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++|+++||||++|||++++++|+++|++|++++|++++.++..+.+.... +.++.++++|+++.+++.++++++.+.++
T Consensus         1 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          1 TRQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999999999999888777776665543 34689999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||+....+...                .+.+.+++++++|+.+++.+++.++|.|++.+.++||++||..+.
T Consensus        81 ~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~  144 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGT----------------GKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV  144 (248)
T ss_pred             CCCEEEECCCcCCCCCcCc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc
Confidence            9999999999865443322                267889999999999999999999999988778899999998876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                          |.+...|+.||++++.+++.++.++  .+++|++|
T Consensus       145 ~~~------------------------------------------~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v  182 (248)
T PRK08251        145 RGL------------------------------------------PGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTI  182 (248)
T ss_pred             cCC------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            543                                          1235789999999999999999998  48999999


Q ss_pred             ecceeecCcccCCC----CCChhhhccchhhhhhcc
Q 039097          242 CPGYVKTEMTYNAG----RLTVEEGAESPVWLALLH  273 (290)
Q Consensus       242 ~PG~v~T~~~~~~~----~~~~e~~a~~~~~l~~~~  273 (290)
                      +||+++|++.+..+    .++++++++.++..+...
T Consensus       183 ~pg~v~t~~~~~~~~~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        183 EPGYIRSEMNAKAKSTPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             ecCcCcchhhhccccCCccCCHHHHHHHHHHHHhcC
Confidence            99999999876543    368999999988877643

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-31  Score=232.97  Aligned_cols=227  Identities=26%  Similarity=0.309  Sum_probs=188.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc----ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE----KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      |.++++++++||||+|+||+++|++|+++|++|++++|..    +..++..+++... +.++.++.+|+++.++++++++
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~   79 (249)
T PRK12827          1 MASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-GGKALGLAFDVRDFAATRAALD   79 (249)
T ss_pred             CCCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-CCcEEEEEccCCCHHHHHHHHH
Confidence            6778899999999999999999999999999999977643    3333334444333 3468899999999999999999


Q ss_pred             HHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhc-hhhccCCCCeEE
Q 039097           77 FIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALI-PLLQLSDSARIV  155 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~-~~l~~~~~~~iV  155 (290)
                      ++.+.++++|++|||||.....+..+                .+.++|++.+++|+.+++.+++.+. +.+++...++||
T Consensus        80 ~~~~~~~~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv  143 (249)
T PRK12827         80 AGVEEFGRLDILVNNAGIATDAAFAE----------------LSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIV  143 (249)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEE
Confidence            99998899999999999875433322                3789999999999999999999999 666666668999


Q ss_pred             EEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--
Q 039097          156 NVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--  233 (290)
Q Consensus       156 ~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--  233 (290)
                      ++||..+..+.                                           ++...|+++|++++.+++.++.++  
T Consensus       144 ~~sS~~~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~  180 (249)
T PRK12827        144 NIASVAGVRGN-------------------------------------------RGQVNYAASKAGLIGLTKTLANELAP  180 (249)
T ss_pred             EECCchhcCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhh
Confidence            99998877643                                           455789999999999999999998  


Q ss_pred             CCeEEEEeecceeecCcccCC------------C-CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 PNFCINCVCPGYVKTEMTYNA------------G-RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~~------------~-~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++++++++||+++|++....            . ..+++++++.+++++.......+|+++..++.
T Consensus       181 ~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~g  247 (249)
T PRK12827        181 RGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVSDAASYVTGQVIPVDGG  247 (249)
T ss_pred             hCcEEEEEEECCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence            489999999999999985532            1 23899999999999887777889999887764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-32  Score=234.40  Aligned_cols=212  Identities=27%  Similarity=0.286  Sum_probs=176.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++||||++|||++++++|+++|++|++++|+.....          ..++.++.+|++++      ++++.+.
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~~~D~~~~------~~~~~~~   64 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------SGNFHFLQLDLSDD------LEPLFDW   64 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------CCcEEEEECChHHH------HHHHHHh
Confidence            3588999999999999999999999999999999999854311          23588899999987      4444455


Q ss_pred             cCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++++|++|||||.... .+..                +.+.+++++++++|+.++++++++++|.|++++.++||++||.
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  128 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLL----------------DTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSI  128 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCh
Confidence            6899999999997532 2211                2378999999999999999999999999988777999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.++++++.++  .+|+|
T Consensus       129 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v  165 (235)
T PRK06550        129 ASFVAG-------------------------------------------GGGAAYTASKHALAGFTKQLALDYAKDGIQV  165 (235)
T ss_pred             hhccCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            876543                                           456789999999999999999999  48999


Q ss_pred             EEeecceeecCcccC-C----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYN-A----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~-~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+++|++... +                ...+||++|+.+++++++.....+|+++..++..
T Consensus       166 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~~~gg~  232 (235)
T PRK06550        166 FGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIVPIDGGW  232 (235)
T ss_pred             EEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEEEECCce
Confidence            999999999997542 1                1358999999999999887788899999888753

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=232.42  Aligned_cols=224  Identities=26%  Similarity=0.338  Sum_probs=182.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +|++|||||+++||.+++++|+++|++|++..+ +++..++..+.+...+ .++.++.||+++.+++.++++++.+.+++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG-GEALAVAADVADEADVLRLFEAVDRELGR   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC-CcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999988874 4444445555554333 45788999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEEEcCCC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVNVSSSL  161 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~isS~~  161 (290)
                      +|++|||||........               .+.+.++|++++++|+.+++.+++.+++.|+++.   .++||++||..
T Consensus        81 id~li~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~  145 (248)
T PRK06123         81 LDALVNNAGILEAQMRL---------------EQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMA  145 (248)
T ss_pred             CCEEEECCCCCCCCCCh---------------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchh
Confidence            99999999986432111               1237899999999999999999999999987542   47899999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                          +.....|+++|++++++++.++.++  .+|+|+
T Consensus       146 ~~~~~------------------------------------------~~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~  183 (248)
T PRK06123        146 ARLGS------------------------------------------PGEYIDYAASKGAIDTMTIGLAKEVAAEGIRVN  183 (248)
T ss_pred             hcCCC------------------------------------------CCCccchHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            76543                                          1123579999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-------------C---CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-------------G---RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-------------~---~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++||++.|++....             +   ..+|+++++.+++++.......+|..+..++.
T Consensus       184 ~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        184 AVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTFIDVSGG  247 (248)
T ss_pred             EEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEeecCC
Confidence            999999999974321             1   13789999999999887666788998887753

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-31  Score=234.65  Aligned_cols=205  Identities=27%  Similarity=0.271  Sum_probs=176.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh-cCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH-FGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~i   85 (290)
                      |++|||||+||||++++++|+++|++|++++|+.+..++..+.+.   +.++.++++|+++.+++.++++.+.++ ++++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---AGNAWTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999999999877666655543   346899999999999999999998876 7899


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+||||||.........                .+.+++++++++|+.+++.+++.+.++|++.+.++||++||..+..+
T Consensus        79 d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  142 (260)
T PRK08267         79 DVLFNNAGILRGGPFED----------------IPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYG  142 (260)
T ss_pred             CEEEECCCCCCCCcccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcC
Confidence            99999999865433322                37899999999999999999999999999887899999999887765


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|+.||+++++++++++.++  .+|++++|.|
T Consensus       143 ~-------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~p  179 (260)
T PRK08267        143 Q-------------------------------------------PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMP  179 (260)
T ss_pred             C-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence            4                                           456789999999999999999998  4899999999


Q ss_pred             ceeecCcccC-------------CCCCChhhhccchhhhhhcc
Q 039097          244 GYVKTEMTYN-------------AGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       244 G~v~T~~~~~-------------~~~~~~e~~a~~~~~l~~~~  273 (290)
                      |++.|++...             ....+|+++++.++.++...
T Consensus       180 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        180 LFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             CCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHHHhCC
Confidence            9999998663             11368899999999887544

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-32  Score=237.11  Aligned_cols=202  Identities=32%  Similarity=0.403  Sum_probs=173.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|+++||||+||||++++++|+++|++|++++|++++.+.         ...+.++++|++|.++++++++.+.+++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   73 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------IPGVELLELDVTDDASVQAAVDEVIARAGR   73 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------cCCCeeEEeecCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999999998654321         124788999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||+....+..+                .+.+++++++++|+.+++.+++.++|.|++++.++||++||..+..
T Consensus        74 ~d~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  137 (270)
T PRK06179         74 IDVLVNNAGVGLAGAAEE----------------SSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFL  137 (270)
T ss_pred             CCEEEECCCCCCCcCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccC
Confidence            999999999875443332                3889999999999999999999999999988889999999988765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           +....|+++|++++.+++.++.|+  .+++|+.|.
T Consensus       138 ~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~  174 (270)
T PRK06179        138 PA-------------------------------------------PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVE  174 (270)
T ss_pred             CC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEe
Confidence            43                                           456789999999999999999998  599999999


Q ss_pred             cceeecCcccCCC--------------------------CCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYNAG--------------------------RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~~~--------------------------~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||++.|++.....                          ..+|+++|+.++.++..+.
T Consensus       175 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        175 PAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPW  232 (270)
T ss_pred             CCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence            9999999865421                          2467888888888876543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.7e-31  Score=230.78  Aligned_cols=222  Identities=26%  Similarity=0.292  Sum_probs=186.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |++|||||+++||+++|++|+++|++|++++| ++...++..+++... +.++.++.+|+++++++.++++.+.+.++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-GFDFRVVEGDVSSFESCKAAVAKVEAELGPI   79 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999988 544444444444322 2468899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+||||||........                +.+.+++++.+++|+.+++.+++.+++.|++.+.++||++||..+..+
T Consensus        80 d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~  143 (242)
T TIGR01829        80 DVLVNNAGITRDATFK----------------KMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKG  143 (242)
T ss_pred             cEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCC
Confidence            9999999976433222                238899999999999999999999999998887789999999877654


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|+++|++++.++++++.++  .+++++++.|
T Consensus       144 ~-------------------------------------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~p  180 (242)
T TIGR01829       144 Q-------------------------------------------FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISP  180 (242)
T ss_pred             C-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEee
Confidence            3                                           456789999999999999999998  5899999999


Q ss_pred             ceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          244 GYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       244 G~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |++.|++....               ...+|+++++.+.++..++....+|+.+..++..
T Consensus       181 g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~gg~  240 (242)
T TIGR01829       181 GYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSINGGL  240 (242)
T ss_pred             CCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEecCCc
Confidence            99999976542               1357899999999998877777899999888753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-31  Score=232.02  Aligned_cols=222  Identities=27%  Similarity=0.321  Sum_probs=181.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |+++++|++|||||+|+||++++++|+++|++|++..|+ .....+..+.+...+ .++.++.+|+++.+++.++++++.
T Consensus         1 ~~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          1 MYSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENG-GEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcC-CeeEEEEeccCCHHHHHHHHHHHH
Confidence            788899999999999999999999999999999887764 343444444444433 357788999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|++|||||.....+...                .+.+.+++.+++|+.+++.+++++.|.|++  .++||++||
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS  141 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFSPFLN----------------VDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIAS  141 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcc
Confidence            99999999999999865443332                277889999999999999999999999874  479999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~v  238 (290)
                      ..+..+.                                           ++...|+++|+++++++++++.++ +++++
T Consensus       142 ~~~~~~~-------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v  178 (252)
T PRK06077        142 VAGIRPA-------------------------------------------YGLSIYGAMKAAVINLTKYLALELAPKIRV  178 (252)
T ss_pred             hhccCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhcCCEE
Confidence            9876543                                           456899999999999999999998 68999


Q ss_pred             EEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          239 NCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +.+.||+++|++....                   ...+|||+|+.+++++..+.  ..|..+..++
T Consensus       179 ~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~--~~g~~~~i~~  243 (252)
T PRK06077        179 NAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIES--ITGQVFVLDS  243 (252)
T ss_pred             EEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCccc--cCCCeEEecC
Confidence            9999999999975321                   13688999999999886443  4555554443

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.2e-31  Score=231.17  Aligned_cols=227  Identities=30%  Similarity=0.357  Sum_probs=193.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|+++||||+|+||++++++|+++|++|++++|+.++..+..+.+...+ .++.++.+|+++.+++.++++++.+
T Consensus         1 ~~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12826          1 TRDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAG-GKARARQVDVRDRAALKAAVAAGVE   79 (251)
T ss_pred             CCCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHH
Confidence            667889999999999999999999999999999999999887777777765544 3588999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++||+||.....+...                .+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||.
T Consensus        80 ~~~~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~  143 (251)
T PRK12826         80 DFGRLDILVANAGIFPLTPFAE----------------MDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSV  143 (251)
T ss_pred             HhCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence            9999999999999875543322                278999999999999999999999999987777899999998


Q ss_pred             CCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      .+. .+.                                           ++...|+++|++++++++.++.++  .+++
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~  180 (251)
T PRK12826        144 AGPRVGY-------------------------------------------PGLAHYAASKAGLVGFTRALALELAARNIT  180 (251)
T ss_pred             HhhccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeE
Confidence            775 322                                           345789999999999999999987  5899


Q ss_pred             EEEeecceeecCcccCC-------------C---CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-------------G---RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-------------~---~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++.+.||++.|++.+..             +   ..+++|+++.+.+++..+....+|+.+..++.
T Consensus       181 ~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  246 (251)
T PRK12826        181 VNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQTLPVDGG  246 (251)
T ss_pred             EEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            99999999999865432             1   25789999999998876666678888887764

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-31  Score=235.51  Aligned_cols=211  Identities=26%  Similarity=0.358  Sum_probs=180.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |++|++|||||+|+||+++|++|+++|++|++++|+++..++..+++.... ..++.++.+|++|.+++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            468999999999999999999999999999999999887777666655433 3468999999999999999 89998889


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||........+                .+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+
T Consensus        80 ~~id~vv~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~  143 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEE----------------IPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG  143 (280)
T ss_pred             CCeeEEEECCcccccCcccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence            99999999999865443322                37899999999999999999999999998877789999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.++++++.++  .+++|+.
T Consensus       144 ~~~~-------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~  180 (280)
T PRK06914        144 RVGF-------------------------------------------PGLSPYVSSKYALEGFSESLRLELKPFGIDVAL  180 (280)
T ss_pred             cCCC-------------------------------------------CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEE
Confidence            6653                                           456789999999999999999887  4899999


Q ss_pred             eecceeecCcccCC------------------------------CCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYNA------------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~~------------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++||+++|++....                              ...+|+|+|+.+++++..+.
T Consensus       181 v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  244 (280)
T PRK06914        181 IEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEIAESKR  244 (280)
T ss_pred             EecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHcCCC
Confidence            99999999975421                              12589999999999988765

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-31  Score=230.07  Aligned_cols=206  Identities=25%  Similarity=0.260  Sum_probs=177.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++||||++|||.+++++|+++|++|++++|++++.++..+++......++.++++|++++++++++++++..   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999988877777776655555789999999999999999998765   469


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ++|||||.....+..                +.+.+++.+.+++|+.+++++++.+.|.|.+++.++||++||..+..+.
T Consensus        79 ~vv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  142 (243)
T PRK07102         79 IVLIAVGTLGDQAAC----------------EADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR  142 (243)
T ss_pred             EEEECCcCCCCcccc----------------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC
Confidence            999999976543322                2378999999999999999999999999998888999999998776543


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|+++|+++++++++++.++  .+++|++|+||
T Consensus       143 -------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg  179 (243)
T PRK07102        143 -------------------------------------------ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPG  179 (243)
T ss_pred             -------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecC
Confidence                                                       455789999999999999999998  48999999999


Q ss_pred             eeecCcccCCC-----CCChhhhccchhhhhhccC
Q 039097          245 YVKTEMTYNAG-----RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       245 ~v~T~~~~~~~-----~~~~e~~a~~~~~l~~~~~  274 (290)
                      +++|++.....     ..+|+++++.++.....+.
T Consensus       180 ~v~t~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~~  214 (243)
T PRK07102        180 FVRTPMTAGLKLPGPLTAQPEEVAKDIFRAIEKGK  214 (243)
T ss_pred             cccChhhhccCCCccccCCHHHHHHHHHHHHhCCC
Confidence            99999866542     4689999999998887654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=4.6e-31  Score=229.71  Aligned_cols=212  Identities=27%  Similarity=0.339  Sum_probs=176.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++++||||+||||.++|++|+++|++|++++|+++++++..+.+    +.++.++.+|+++.+++.++++++.+.++++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id   76 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNID   76 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----ccceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            37999999999999999999999999999999987665544433    23588899999999999999999999999999


Q ss_pred             EEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           87 ILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      ++|||||.... .+..                +.+.+++++++++|+.+++.+++.++|+|++.+.++||++||..+..+
T Consensus        77 ~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~  140 (248)
T PRK10538         77 VLVNNAGLALGLEPAH----------------KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP  140 (248)
T ss_pred             EEEECCCccCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC
Confidence            99999997532 1211                238899999999999999999999999998877789999999877654


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|+++|++++++++.++.++  .+|+||.|.|
T Consensus       141 ~-------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p  177 (248)
T PRK10538        141 Y-------------------------------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP  177 (248)
T ss_pred             C-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence            3                                           455789999999999999999998  5899999999


Q ss_pred             ceeecCcccC----------------CCCCChhhhccchhhhhhccCCCCceeE
Q 039097          244 GYVKTEMTYN----------------AGRLTVEEGAESPVWLALLHKGGPSGLF  281 (290)
Q Consensus       244 G~v~T~~~~~----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~  281 (290)
                      |++.|++...                ..+.+|+++|+.+++++..++....+.+
T Consensus       178 g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~  231 (248)
T PRK10538        178 GLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVATLPAHVNINTL  231 (248)
T ss_pred             CeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence            9997443211                1246899999999999988876554444

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-31  Score=226.86  Aligned_cols=219  Identities=28%  Similarity=0.362  Sum_probs=185.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+.+++++++||||+|+||++++++|+++|++|++++|++.+..+..+++...  .++.++.+|+++.+++.++++++.+
T Consensus         1 m~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   78 (237)
T PRK07326          1 MMSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--GNVLGLAADVRDEADVQRAVDAIVA   78 (237)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            77788999999999999999999999999999999999988777777766543  4588999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++||+||.....+..                +.+.+++++++++|+.+++.+++++++.|+ ...++||++||.
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~iv~~ss~  141 (237)
T PRK07326         79 AFGGLDVLIANAGVGHFAPVE----------------ELTPEEWRLVIDTNLTGAFYTIKAAVPALK-RGGGYIINISSL  141 (237)
T ss_pred             HcCCCCEEEECCCCCCCCchh----------------hCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HCCeEEEEECCh
Confidence            999999999999976543322                237899999999999999999999999984 445899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           .+...|+++|+++.++++.++.++  .++++
T Consensus       142 ~~~~~~-------------------------------------------~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v  178 (237)
T PRK07326        142 AGTNFF-------------------------------------------AGGAAYNASKFGLVGFSEAAMLDLRQYGIKV  178 (237)
T ss_pred             hhccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            765443                                           345789999999999999999888  58999


Q ss_pred             EEeecceeecCcccCCC------CCChhhhccchhhhhhccCCCCceeE
Q 039097          239 NCVCPGYVKTEMTYNAG------RLTVEEGAESPVWLALLHKGGPSGLF  281 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~------~~~~e~~a~~~~~l~~~~~~~~~g~~  281 (290)
                      ++|.||++.|++....+      ..+++++++.+++++..+.....+.+
T Consensus       179 ~~v~pg~~~t~~~~~~~~~~~~~~~~~~d~a~~~~~~l~~~~~~~~~~~  227 (237)
T PRK07326        179 STIMPGSVATHFNGHTPSEKDAWKIQPEDIAQLVLDLLKMPPRTLPSKI  227 (237)
T ss_pred             EEEeeccccCcccccccchhhhccCCHHHHHHHHHHHHhCCccccccce
Confidence            99999999999765432      26889999999999887765444433

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6e-31  Score=226.70  Aligned_cols=225  Identities=22%  Similarity=0.239  Sum_probs=190.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+.+++|++|||||+|+||++++++|+++|++|++++|++.+..+..+++...   .+.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD---ALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc---CceEEEeecCCHHHHHHHHHHHHH
Confidence            44688999999999999999999999999999999999987766666555432   366788999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++||++|.....+..                ..+.+++++.+++|+.+++.+++.+.+.+++++.++||++||.
T Consensus        79 ~~~~~d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~  142 (239)
T PRK12828         79 QFGRLDALVNIAGAFVWGTIA----------------DGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAG  142 (239)
T ss_pred             HhCCcCEEEECCcccCcCChh----------------hCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECch
Confidence            999999999999976433222                2278999999999999999999999999987778899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|+++|++++.+++.++.++  .++++
T Consensus       143 ~~~~~~-------------------------------------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~  179 (239)
T PRK12828        143 AALKAG-------------------------------------------PGMGAYAAAKAGVARLTEALAAELLDRGITV  179 (239)
T ss_pred             HhccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            776543                                           445789999999999999999987  48999


Q ss_pred             EEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.+.||++.|++....       ...+++++++.+++++.......+|+.+..++.
T Consensus       180 ~~i~pg~v~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~  235 (239)
T PRK12828        180 NAVLPSIIDTPPNRADMPDADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGG  235 (239)
T ss_pred             EEEecCcccCcchhhcCCchhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCC
Confidence            9999999999865432       124689999999999887665678998887765

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.8e-31  Score=230.01  Aligned_cols=219  Identities=26%  Similarity=0.248  Sum_probs=186.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|+++||||+++||++++++|+++|++|++++|++++.++..+.+.   +.++.++.+|+++.+++.++++++.+.++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---DARFVPVACDLTDAASLAAALANAAAERGPV   78 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999999999877766666552   2358899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |++|||||.....+..                +.+.++|.+.+++|+.+++.+++++.+.+++++.++||++||..+...
T Consensus        79 d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~  142 (257)
T PRK07074         79 DVLVANAGAARAASLH----------------DTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA  142 (257)
T ss_pred             CEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC
Confidence            9999999986543332                237899999999999999999999999998777789999999765432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                                                                  .+...|+.+|++++.++++++.++  .+++|+.+.|
T Consensus       143 --------------------------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~p  178 (257)
T PRK07074        143 --------------------------------------------LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAP  178 (257)
T ss_pred             --------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEe
Confidence                                                        234689999999999999999998  4899999999


Q ss_pred             ceeecCcccC------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          244 GYVKTEMTYN------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       244 G~v~T~~~~~------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |++.|++...                  .....++|+++.+++++.......+|+.+..++.
T Consensus       179 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  240 (257)
T PRK07074        179 GTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVDGG  240 (257)
T ss_pred             CcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCC
Confidence            9999997432                  1236899999999999987777788999876654

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=6.7e-31  Score=229.24  Aligned_cols=224  Identities=27%  Similarity=0.318  Sum_probs=183.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||||+|+||.++|++|+++|++|++++|+.. ..++..+.++... .++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG-VEVIFFPADVADLSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            589999999999999999999999999999998753 3344445554332 46889999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC------CCeEEEEc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD------SARIVNVS  158 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~------~~~iV~is  158 (290)
                      +|++|||||.......              ...+.+.+.+++.+++|+.+++++++.+.+.|+++.      .++||++|
T Consensus        81 id~vi~~ag~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~s  146 (256)
T PRK12745         81 IDCLVNNAGVGVKVRG--------------DLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVS  146 (256)
T ss_pred             CCEEEECCccCCCCCC--------------ChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEEC
Confidence            9999999997532210              011337899999999999999999999999998654      35799999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|+.+|++++.++++++.++  .++
T Consensus       147 S~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi  183 (256)
T PRK12745        147 SVNAIMVS-------------------------------------------PNRGEYCISKAGLSMAAQLFAARLAEEGI  183 (256)
T ss_pred             ChhhccCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCC
Confidence            99876654                                           345789999999999999999987  589


Q ss_pred             EEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|++++||++.|++....                ...+|+++++.+.++........+|.++..++.
T Consensus       184 ~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        184 GVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             EEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence            999999999999975431                122689999999988876666778998887764

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.98  E-value=5.1e-31  Score=229.44  Aligned_cols=218  Identities=25%  Similarity=0.291  Sum_probs=176.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc-
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL-   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i-   85 (290)
                      |+++||||+||||+++|++|+++|++|++++|++.+   ..+++....+.++.++.+|+++.++++++++++.+.++.. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK---ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH---HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            689999999999999999999999999999998632   1222332233468889999999999999999998776532 


Q ss_pred             -c--EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCCC
Q 039097           86 -D--ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSSL  161 (290)
Q Consensus        86 -d--~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~~  161 (290)
                       +  ++|+|||...+....               .+.+.++|.+.+++|+.+++.+++.++|+|++. ..++||++||..
T Consensus        79 ~~~~~~v~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~  143 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPI---------------EKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGA  143 (251)
T ss_pred             CCceEEEEcceecccCccc---------------ccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchh
Confidence             2  899999976432211               233889999999999999999999999999875 357999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~  237 (290)
                      +..+.                                           ++...|+++|+|++++++.++.|+    .+++
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~  180 (251)
T PRK06924        144 AKNPY-------------------------------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVK  180 (251)
T ss_pred             hcCCC-------------------------------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeE
Confidence            65543                                           456899999999999999999886    3799


Q ss_pred             EEEeecceeecCcccC---------------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          238 INCVCPGYVKTEMTYN---------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~---------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |++|.||++.|++...                     ....+|+++|+.+++++... ...+|+++..++
T Consensus       181 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        181 IVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-DFPNGEVIDIDE  249 (251)
T ss_pred             EEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-cCCCCCEeehhh
Confidence            9999999999997432                     12468999999999998874 578899887664

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=9.1e-31  Score=227.58  Aligned_cols=231  Identities=23%  Similarity=0.206  Sum_probs=187.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++++++||||++|||+++++.|+++|++|++++|++.+.++..+++...+ .++.++++|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALG-TEVRGYAANVTDEEDVEATFAQIAEDF   80 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5889999999999999999999999999999999999887777777765543 468889999999999999999999888


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccc-cccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGK-MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSS  160 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~  160 (290)
                      +++|++|||||..........        ..... ...+.+.+++++++|+.+++.+++.+.|.|.+. ..++||++||.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~  152 (253)
T PRK08217         81 GQLNGLINNAGILRDGLLVKA--------KDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI  152 (253)
T ss_pred             CCCCEEEECCCccCcCccccc--------ccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence            999999999997543211000        00001 234789999999999999999999999999765 45789999986


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .. .+.                                           ++...|+++|+|+++++++++.++  .++++
T Consensus       153 ~~-~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v  188 (253)
T PRK08217        153 AR-AGN-------------------------------------------MGQTNYSASKAGVAAMTVTWAKELARYGIRV  188 (253)
T ss_pred             cc-cCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence            43 221                                           345789999999999999999998  58999


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ++++||++.|++....               ...+|+++++.+.+++..  ...+|+.+..++..
T Consensus       189 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~g~~~~~~gg~  251 (253)
T PRK08217        189 AAIAPGVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN--DYVTGRVLEIDGGL  251 (253)
T ss_pred             EEEeeCCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC--CCcCCcEEEeCCCc
Confidence            9999999999986542               124889999999999853  45799999888753

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=1.8e-30  Score=224.77  Aligned_cols=228  Identities=28%  Similarity=0.343  Sum_probs=190.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |..++.|++|||||+|+||++++++|+++|++|++..|+..+.. ...+.+... +.++.++.+|+++.+++.++++++.
T Consensus         1 ~~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~   79 (249)
T PRK12825          1 MGSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-GRRAQAVQADVTDKAALEAAVAAAV   79 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCcCCHHHHHHHHHHHH
Confidence            77888899999999999999999999999999888777655433 333333332 3468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++.+|.+||+||.....+..                +.+.+++++.+++|+.+++++++.+.+++++.+.+++|++||
T Consensus        80 ~~~~~id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS  143 (249)
T PRK12825         80 ERFGRIDILVNNAGIFEDKPLA----------------DMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISS  143 (249)
T ss_pred             HHcCCCCEEEECCccCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECc
Confidence            9889999999999976443322                237889999999999999999999999998887889999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+.+|++++++++.++.++  .+++
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~  180 (249)
T PRK12825        144 VAGLPGW-------------------------------------------PGRSNYAAAKAGLVGLTKALARELAEYGIT  180 (249)
T ss_pred             cccCCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            9876543                                           345789999999999999999997  5899


Q ss_pred             EEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ++.++||++.|++....               ...+++++++.+.+++.......+|+++..++..
T Consensus       181 ~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g~  246 (249)
T PRK12825        181 VNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGGV  246 (249)
T ss_pred             EEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCE
Confidence            99999999999985432               1347899999999999877667899999888754

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.9e-31  Score=226.16  Aligned_cols=212  Identities=25%  Similarity=0.251  Sum_probs=179.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |.+|+++||||+++||++++++|+++|++|++++|+..+.      .      ...++.+|+++.++++++++++.+.+ 
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~------~~~~~~~D~~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F------PGELFACDLADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c------CceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            4679999999999999999999999999999999987541      0      12468999999999999999998876 


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||.....+..                +.+.+++++.+++|+.+++.+.+.++|.|++.+.++||++||... 
T Consensus        68 ~~d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-  130 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLG----------------KIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-  130 (234)
T ss_pred             CCcEEEECCCCCCCCChH----------------HCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-
Confidence            699999999986544322                237899999999999999999999999998877789999999853 


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|+++|+++++++++++.++  .+++|++|
T Consensus       131 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i  167 (234)
T PRK07577        131 FGA-------------------------------------------LDRTSYSAAKSALVGCTRTWALELAEYGITVNAV  167 (234)
T ss_pred             cCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEE
Confidence            221                                           345789999999999999999998  48999999


Q ss_pred             ecceeecCcccCCC------------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          242 CPGYVKTEMTYNAG------------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       242 ~PG~v~T~~~~~~~------------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||++.|++.....                  ..+|+++|+.+++++..+....+|.++..++..
T Consensus       168 ~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (234)
T PRK07577        168 APGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGVDGGG  232 (234)
T ss_pred             ecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEEecCCc
Confidence            99999999864321                  137899999999999887778899999887653

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.98  E-value=5e-31  Score=248.61  Aligned_cols=223  Identities=31%  Similarity=0.373  Sum_probs=185.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|....  +..+++....  ...++.+|+++.++++++++.+.+.+
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~  282 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVANRV--GGTALALDITAPDAPARIAEHLAERH  282 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHHHc--CCeEEEEeCCCHHHHHHHHHHHHHhC
Confidence            3578999999999999999999999999999999885321  1122222211  23578999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||+.......                +.+.+.|+.++++|+.+++++.+.+.+.+..+..++||++||..+
T Consensus       283 g~id~vi~~AG~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~  346 (450)
T PRK08261        283 GGLDIVVHNAGITRDKTLA----------------NMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISG  346 (450)
T ss_pred             CCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhh
Confidence            9999999999987543332                238899999999999999999999999665556789999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|+++++++++++.++  .++++|+
T Consensus       347 ~~g~-------------------------------------------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~  383 (450)
T PRK08261        347 IAGN-------------------------------------------RGQTNYAASKAGVIGLVQALAPLLAERGITINA  383 (450)
T ss_pred             cCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEE
Confidence            6653                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|++....+               ...|+|+++.++|+++......+|+.+..++..
T Consensus       384 v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~~  446 (450)
T PRK08261        384 VAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQS  446 (450)
T ss_pred             EEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            999999999865432               137899999999999877788999999988754

>PRK09135 pteridine reductase; Provisional

Probab=99.98  E-value=1.8e-30  Score=225.25  Aligned_cols=226  Identities=23%  Similarity=0.231  Sum_probs=182.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |+.++++++|||||+|+||++++++|+++|++|++++|+.. ..+...+.+....+..+.++.+|+++.+++.++++++.
T Consensus         1 ~~~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   80 (249)
T PRK09135          1 MMTDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACV   80 (249)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            67788999999999999999999999999999999998743 34444444544444468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|++|||||.....+...                .+.+++++++++|+.+++++++++.|++.+. .+++++++|
T Consensus        81 ~~~~~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~  143 (249)
T PRK09135         81 AAFGRLDALVNNASSFYPTPLGS----------------ITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITD  143 (249)
T ss_pred             HHcCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeC
Confidence            99999999999999865433222                2678999999999999999999999998755 478888887


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~v  238 (290)
                      ..+..+.                                           ++...|+.||++++.++++++.++ +++++
T Consensus       144 ~~~~~~~-------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~  180 (249)
T PRK09135        144 IHAERPL-------------------------------------------KGYPVYCAAKAALEMLTRSLALELAPEVRV  180 (249)
T ss_pred             hhhcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHCCCCeE
Confidence            5543322                                           456789999999999999999998 58999


Q ss_pred             EEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++.||++.|++....                ...+++|+++.+++++.. ....+|+.+..++.
T Consensus       181 ~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~i~~g  244 (249)
T PRK09135        181 NAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILAVDGG  244 (249)
T ss_pred             EEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEEECCC
Confidence            9999999999985431                123789999998877764 33467887776654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.7e-31  Score=227.65  Aligned_cols=216  Identities=28%  Similarity=0.293  Sum_probs=180.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||+++||+++++.|+++|++|++++|++++.++..++.      ...++.+|+++.+++.++++.    .
T Consensus         6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~----~   75 (245)
T PRK07060          6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET------GCEPLRLDVGDDAAIRAALAA----A   75 (245)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCeEEEecCCCHHHHHHHHHH----h
Confidence            578999999999999999999999999999999999976655444332      256788999999998888775    4


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~  161 (290)
                      +++|++|||||.....+..+                .+.+++++.+++|+.+++.+++++.+.+++.. .++||++||..
T Consensus        76 ~~~d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~  139 (245)
T PRK07060         76 GAFDGLVNCAGIASLESALD----------------MTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQA  139 (245)
T ss_pred             CCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHH
Confidence            78999999999864433222                37899999999999999999999999987554 47999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.++++++.++  .+++++
T Consensus       140 ~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~  176 (245)
T PRK07060        140 ALVGL-------------------------------------------PDHLAYCASKAALDAITRVLCVELGPHGIRVN  176 (245)
T ss_pred             HcCCC-------------------------------------------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            76543                                           345789999999999999999998  489999


Q ss_pred             EeecceeecCcccC-----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN-----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~-----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++||++.|++...                 ....+++|+++.+++++..+....+|+++..++.
T Consensus       177 ~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        177 SVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             EEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence            99999999997431                 1136899999999999998888889999988775

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.98  E-value=9.2e-31  Score=256.94  Aligned_cols=226  Identities=24%  Similarity=0.243  Sum_probs=190.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+.++...+++.... ...+..+++|+++.+++.++++++.+.
T Consensus       411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~  490 (676)
T TIGR02632       411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA  490 (676)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999887777666665432 335788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~  160 (290)
                      ++++|+||||||.....+..                +.+.++|+..+++|+.+++++++.+++.|+++. +++||++||.
T Consensus       491 ~g~iDilV~nAG~~~~~~~~----------------~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~  554 (676)
T TIGR02632       491 YGGVDIVVNNAGIATSSPFE----------------ETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASK  554 (676)
T ss_pred             cCCCcEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCh
Confidence            99999999999976443332                237899999999999999999999999998764 5799999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+++++++++++.++  .+|+|
T Consensus       555 ~a~~~~-------------------------------------------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrV  591 (676)
T TIGR02632       555 NAVYAG-------------------------------------------KNASAYSAAKAAEAHLARCLAAEGGTYGIRV  591 (676)
T ss_pred             hhcCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            776653                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecC--cccC---------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTE--MTYN---------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~--~~~~---------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+|.|+  ++..                           ....+|+|+|+.+++++.......+|+++..++.
T Consensus       592 n~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG  669 (676)
T TIGR02632       592 NTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGG  669 (676)
T ss_pred             EEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence            99999998642  2110                           0135889999999999887777889999988774

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-30  Score=229.81  Aligned_cols=212  Identities=25%  Similarity=0.328  Sum_probs=178.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.+|+++||||+|+||+++|++|+++|++|++++|+.+...+..+++...+ .++.++.+|+++++++.++++++.+.+
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADG-GEAVAFPLDVTDPDSVKSFVAQAEEAL   85 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            5667899999999999999999999999999999998777666655554433 358889999999999999999999989


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.....+..                +.+.+.+++.+++|+.+++++++.+++.|+++..++||++||..+
T Consensus        86 ~~id~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~  149 (274)
T PRK07775         86 GEIEVLVSGAGDTYFGKLH----------------EISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA  149 (274)
T ss_pred             CCCCEEEECCCcCCCcccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh
Confidence            9999999999976443322                237899999999999999999999999998777789999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|+++|++++.+++.++.++  .++++++
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~  186 (274)
T PRK07775        150 LRQR-------------------------------------------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASI  186 (274)
T ss_pred             cCCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            6543                                           345689999999999999999988  4899999


Q ss_pred             eecceeecCcccC---------------------CCCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYN---------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~---------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++||+++|++...                     .....++|+|+.+++++..+.
T Consensus       187 v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~  241 (274)
T PRK07775        187 VHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR  241 (274)
T ss_pred             EeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC
Confidence            9999999885321                     124589999999999887553

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.9e-30  Score=224.32  Aligned_cols=226  Identities=28%  Similarity=0.368  Sum_probs=192.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|++|++|||||+|+||.+++++|+++|++|++++|++.+.+...+++...+ .++.++.+|+++.+++.++++++...+
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG-GEARVLVFDVSDEAAVRALIEAAVEAF   80 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            7888999999999999999999999999999999999887776666665433 458889999999999999999999888


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++||+||.....+..+                .+.+++++.+++|+.+++++++.+.++|.+.+.++||++||..+
T Consensus        81 ~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~  144 (246)
T PRK05653         81 GALDILVNNAGITRDALLPR----------------MSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG  144 (246)
T ss_pred             CCCCEEEECCCcCCCCChhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh
Confidence            99999999999865433322                37899999999999999999999999998777789999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           .+...|+.+|++++.++++++.++  .+++++.
T Consensus       145 ~~~~-------------------------------------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~  181 (246)
T PRK05653        145 VTGN-------------------------------------------PGQTNYSAAKAGVIGFTKALALELASRGITVNA  181 (246)
T ss_pred             ccCC-------------------------------------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            5433                                           345789999999999999999987  4899999


Q ss_pred             eecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +.||.+.+++....               ...+++++++.+.+++.......+|.++..++..
T Consensus       182 i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg~  244 (246)
T PRK05653        182 VAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVIPVNGGM  244 (246)
T ss_pred             EEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCCe
Confidence            99999999987531               2357799999999998776667899999888754

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=2.9e-30  Score=223.41  Aligned_cols=225  Identities=28%  Similarity=0.352  Sum_probs=188.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||+|+||++++++|+++|++|+++.|+..+ .+...+++... +.++.++.+|+++.+++.++++++.+.
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-GGKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5678999999999999999999999999999888887653 44444444433 346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++||+||.....+...                .+.+.+++.+++|+.+++.+.+.+.+.+.+.+.+++|++||..
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~  144 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMR----------------MKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVV  144 (248)
T ss_pred             cCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccc
Confidence            999999999999865433222                3789999999999999999999999999877778999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++.+++.++.++  .+++++
T Consensus       145 ~~~~~-------------------------------------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~  181 (248)
T PRK05557        145 GLMGN-------------------------------------------PGQANYAASKAGVIGFTKSLARELASRGITVN  181 (248)
T ss_pred             cCcCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            66543                                           345789999999999999999987  589999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++||++.|++.+..               ...+++++++.+.++........+|+.+..++.
T Consensus       182 ~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        182 AVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGG  244 (248)
T ss_pred             EEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence            999999999876542               125789999999998877666789999888765

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=230.47  Aligned_cols=200  Identities=28%  Similarity=0.319  Sum_probs=168.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||+||||++++++|+++|++|++++|+.++.++..    ..   .+.++.+|+++.++++++++.+.+.++++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~---~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   74 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA---GFTAVQLDVNDGAALARLAEELEAEHGGLD   74 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC---CCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            68999999999999999999999999999999876544322    21   367889999999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ++|||||.....+..                +.+.+++++.+++|+.+++.+++.++|.|++. .++||++||..+..+.
T Consensus        75 ~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~  137 (274)
T PRK05693         75 VLINNAGYGAMGPLL----------------DGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT  137 (274)
T ss_pred             EEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC
Confidence            999999986443332                23889999999999999999999999999754 4899999998876543


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 +....|+++|++++.++++++.|+  .+|+|++|+||
T Consensus       138 -------------------------------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg  174 (274)
T PRK05693        138 -------------------------------------------PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG  174 (274)
T ss_pred             -------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecC
Confidence                                                       445789999999999999999998  48999999999


Q ss_pred             eeecCcccCCC------------------------------CCChhhhccchhhhhhcc
Q 039097          245 YVKTEMTYNAG------------------------------RLTVEEGAESPVWLALLH  273 (290)
Q Consensus       245 ~v~T~~~~~~~------------------------------~~~~e~~a~~~~~l~~~~  273 (290)
                      +|.|++.+...                              +.+|+++|+.++..+..+
T Consensus       175 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~~  233 (274)
T PRK05693        175 AIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQS  233 (274)
T ss_pred             ccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            99999865421                              246888888888776543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.97  E-value=1.2e-30  Score=225.01  Aligned_cols=218  Identities=24%  Similarity=0.289  Sum_probs=172.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++++||||++|||+++|++|+++|  +.|++..|+....         ....++.+++||+++.++++++.+    .+++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------~~~~~~~~~~~Dls~~~~~~~~~~----~~~~   67 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------FQHDNVQWHALDVTDEAEIKQLSE----QFTQ   67 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------cccCceEEEEecCCCHHHHHHHHH----hcCC
Confidence            479999999999999999999985  5666666754321         112368889999999999888554    4589


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|++|||||........          ....+.+.+.+.|.+.+++|+.+++.+++.++|.|+++..++|+++||..+..
T Consensus        68 id~li~~aG~~~~~~~~----------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~  137 (235)
T PRK09009         68 LDWLINCVGMLHTQDKG----------PEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSI  137 (235)
T ss_pred             CCEEEECCccccccccC----------cccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccc
Confidence            99999999987532110          01122344788999999999999999999999999877778999999876543


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeEEEE
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINC  240 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~vn~  240 (290)
                      ...                                       . .++...|+++|+++++|+++|+.|+    ++++||+
T Consensus       138 ~~~---------------------------------------~-~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~  177 (235)
T PRK09009        138 SDN---------------------------------------R-LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLA  177 (235)
T ss_pred             ccC---------------------------------------C-CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEE
Confidence            210                                       0 1345789999999999999999987    3899999


Q ss_pred             eecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++....       ...+||++|+.+++++.......+|.++..++.
T Consensus       178 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~  231 (235)
T PRK09009        178 LHPGTTDTALSKPFQQNVPKGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGE  231 (235)
T ss_pred             EcccceecCCCcchhhccccCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCc
Confidence            99999999996653       246899999999999998877889999987765

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-30  Score=227.59  Aligned_cols=229  Identities=28%  Similarity=0.329  Sum_probs=187.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||+|+||++++++|+++|++|++++|+++..++..+....   .++.++.+|+++++++.++++++.+
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG---AKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CceEEEEccCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999987766555444422   1578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC-CeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~-~~iV~isS  159 (290)
                      .++++|+|||+||........               ...+.+++.+++++|+.+++.+++.+.+.+.+... ++|+++||
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss  147 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGI---------------DEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSS  147 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCc---------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence            999999999999986332111               12278899999999999999999999998877665 78999998


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+.+|++++.+++.++.++  .+++
T Consensus       148 ~~~~~~~-------------------------------------------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~  184 (264)
T PRK12829        148 VAGRLGY-------------------------------------------PGRTPYAASKWAVVGLVKSLAIELGPLGIR  184 (264)
T ss_pred             cccccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            8765543                                           445689999999999999999988  5899


Q ss_pred             EEEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccccC
Q 039097          238 INCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF  290 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~~  290 (290)
                      ++++.||++.|++....                          ...+++++++.+++++.......+|+.+..++...|
T Consensus       185 ~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~~~  263 (264)
T PRK12829        185 VNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPAARYITGQAISVDGNVEY  263 (264)
T ss_pred             EEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCCccc
Confidence            99999999999875321                          246789999998888765545668888888776543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=5.1e-32  Score=214.80  Aligned_cols=218  Identities=26%  Similarity=0.225  Sum_probs=184.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+++++||+.-|||+++++.|++.|+.|+.++|++..+....++.    +.-+..++.|+++++.+.+.+-.    .
T Consensus         4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----p~~I~Pi~~Dls~wea~~~~l~~----v   75 (245)
T KOG1207|consen    4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----PSLIIPIVGDLSAWEALFKLLVP----V   75 (245)
T ss_pred             cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----CcceeeeEecccHHHHHHHhhcc----c
Confidence            578999999999999999999999999999999999998877766554    23478899999998877666554    4


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc-cCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ-LSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~-~~~~~~iV~isS~~  161 (290)
                      +.+|.++||||+.-..+..                +.+.+.++..|++|+.+++++.+...+-+. +...|.|||+||..
T Consensus        76 ~pidgLVNNAgvA~~~pf~----------------eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqa  139 (245)
T KOG1207|consen   76 FPIDGLVNNAGVATNHPFG----------------EITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQA  139 (245)
T ss_pred             CchhhhhccchhhhcchHH----------------HHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchh
Confidence            7899999999997655544                349999999999999999999999666544 33457899999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +.++.                                           .++..|+++|+|+.+++|.||.|+  .+||||
T Consensus       140 s~R~~-------------------------------------------~nHtvYcatKaALDmlTk~lAlELGp~kIRVN  176 (245)
T KOG1207|consen  140 SIRPL-------------------------------------------DNHTVYCATKAALDMLTKCLALELGPQKIRVN  176 (245)
T ss_pred             ccccc-------------------------------------------CCceEEeecHHHHHHHHHHHHHhhCcceeEee
Confidence            98876                                           567999999999999999999999  489999


Q ss_pred             EeecceeecCcccCC-C----------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-G----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|.|-.+.|.|.++. .                -...|++...+++++++...-.+|..+...|.
T Consensus       177 sVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmttGstlpveGG  241 (245)
T KOG1207|consen  177 SVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTTGSTLPVEGG  241 (245)
T ss_pred             ccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCcccCceeeecCC
Confidence            999999999997663 1                12668889999999998888888888776654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=256.73  Aligned_cols=212  Identities=27%  Similarity=0.345  Sum_probs=182.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+++.+++..+++...+ .++.++.+|++|.+++.++++++.+.+
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG-GTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            5779999999999999999999999999999999999988888777775543 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||..........              ..+.+++++++++|+.+++.+++.++|.|++++.++||++||..+
T Consensus       447 g~id~li~~Ag~~~~~~~~~~--------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  512 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENS--------------TDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGV  512 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhc--------------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhh
Confidence            999999999997543222111              013578999999999999999999999999888899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       513 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~  549 (657)
T PRK07201        513 QTNA-------------------------------------------PRFSAYVASKAALDAFSDVAASETLSDGITFTT  549 (657)
T ss_pred             cCCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEE
Confidence            6543                                           456789999999999999999998  5899999


Q ss_pred             eecceeecCcccCC------CCCChhhhccchhhhhhc
Q 039097          241 VCPGYVKTEMTYNA------GRLTVEEGAESPVWLALL  272 (290)
Q Consensus       241 v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~  272 (290)
                      |+||+++|+|....      +..+||++|+.++..+..
T Consensus       550 v~pg~v~T~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        550 IHMPLVRTPMIAPTKRYNNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             EECCcCcccccCccccccCCCCCCHHHHHHHHHHHHHh
Confidence            99999999987642      346899999999887653

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=3.4e-30  Score=224.40  Aligned_cols=225  Identities=28%  Similarity=0.396  Sum_probs=189.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+...+++.... .++.++.+|+++.+++.++++++.+.++++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAG-GSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999999999877766666654433 468899999999999999999999988999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |++|||||.....+...                .+.+++++++++|+.+++.+++.+++.|++.+.+++|++||..+..+
T Consensus        80 d~vi~~a~~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~  143 (255)
T TIGR01963        80 DILVNNAGIQHVAPIEE----------------FPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVA  143 (255)
T ss_pred             CEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCC
Confidence            99999999865433222                27889999999999999999999999998877789999999876654


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           +....|+++|++++.++++++.++  .+++|+.++|
T Consensus       144 ~-------------------------------------------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~p  180 (255)
T TIGR01963       144 S-------------------------------------------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICP  180 (255)
T ss_pred             C-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            3                                           445789999999999999999887  4899999999


Q ss_pred             ceeecCcccC---------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccccC
Q 039097          244 GYVKTEMTYN---------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF  290 (290)
Q Consensus       244 G~v~T~~~~~---------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~~  290 (290)
                      |++.|++...                           ....+++|+++.+++++..+....+|+++..++...|
T Consensus       181 g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       181 GYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             CccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCcccc
Confidence            9999886321                           1246899999999999887666678898888776543

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=3.9e-30  Score=222.99  Aligned_cols=223  Identities=29%  Similarity=0.369  Sum_probs=183.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |++|||||+|+||++++++|+++|++|++. .|++++..+...++...+ .++.++++|++|.++++++++++.+.++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i   80 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAG-GKAFVLQADISDENQVVAMFTAIDQHDEPL   80 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCC-CeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999874 677766666666665433 458889999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEEEcCCCC
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVNVSSSLG  162 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~isS~~g  162 (290)
                      |++|||||........               .+.+.++|+..+++|+.+++.+++.+++.|.+..   .++||++||..+
T Consensus        81 d~vi~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~  145 (247)
T PRK09730         81 AALVNNAGILFTQCTV---------------ENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAAS  145 (247)
T ss_pred             CEEEECCCCCCCCCcc---------------ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhh
Confidence            9999999975332111               1237889999999999999999999999987652   478999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                          |.....|+++|++++.++++++.++  .++++++
T Consensus       146 ~~~~------------------------------------------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~  183 (247)
T PRK09730        146 RLGA------------------------------------------PGEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNC  183 (247)
T ss_pred             ccCC------------------------------------------CCcccchHhHHHHHHHHHHHHHHHHHHhCeEEEE
Confidence            6543                                          1223579999999999999999988  5899999


Q ss_pred             eecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++||++.|++....                ...+|+++++.+++++.......+|.++..++.
T Consensus       184 i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        184 VRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSFIDLAGG  246 (247)
T ss_pred             EEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcEEecCCC
Confidence            99999999975421                123889999999999987777789999888764

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.9e-30  Score=219.19  Aligned_cols=217  Identities=25%  Similarity=0.363  Sum_probs=175.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++||||++|||++++++|+++|++|++++|++.+.++. +++     ..+.+..+|++|.++++++++++..  +++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~--~~id   73 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QAL-----PGVHIEKLDMNDPASLDQLLQRLQG--QRFD   73 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-Hhc-----cccceEEcCCCCHHHHHHHHHHhhc--CCCC
Confidence            6899999999999999999999999999999998765432 222     2467788999999999999998854  4799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ++|||||........              ..+.+.+++++.+++|+.+++.+++.++|.+++. .++|+++||..+..+.
T Consensus        74 ~vi~~ag~~~~~~~~--------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~  138 (225)
T PRK08177         74 LLFVNAGISGPAHQS--------------AADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVEL  138 (225)
T ss_pred             EEEEcCcccCCCCCC--------------cccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCcccccc
Confidence            999999986432110              1233789999999999999999999999998754 4799999998765432


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                      .                                        ...+...|+++|++++.++++++.++  ++|+||+|+||
T Consensus       139 ~----------------------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG  178 (225)
T PRK08177        139 P----------------------------------------DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPG  178 (225)
T ss_pred             C----------------------------------------CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCC
Confidence            0                                        01245689999999999999999998  48999999999


Q ss_pred             eeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          245 YVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       245 ~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +++|++.....+.++++.++.++..+........+.++++.+
T Consensus       179 ~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (225)
T PRK08177        179 WVKTDMGGDNAPLDVETSVKGLVEQIEAASGKGGHRFIDYQG  220 (225)
T ss_pred             ceecCCCCCCCCCCHHHHHHHHHHHHHhCCccCCCceeCcCC
Confidence            999999877777889998888888877666556666665544

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.6e-30  Score=225.38  Aligned_cols=184  Identities=25%  Similarity=0.349  Sum_probs=158.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .|++|||||+|+||++++++|+++|++|++++|+++..++..+.    .+.++.++.+|++|.+++.++++++.+.++++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKAR----YGDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----ccCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999997655443332    23468899999999999999999999988999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+||||||.....+..+                .+.+++++.+++|+.+++++++.++|+|++++.++||++||..+..+
T Consensus        78 d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~  141 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEE----------------LSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA  141 (276)
T ss_pred             CEEEECCCCCCCccccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC
Confidence            99999999875444332                27789999999999999999999999998887889999999876543


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|++||++++.++++++.++  .+++++.+.|
T Consensus       142 ~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~p  178 (276)
T PRK06482        142 Y-------------------------------------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEP  178 (276)
T ss_pred             C-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeC
Confidence            3                                           456789999999999999999997  4899999999


Q ss_pred             ceeecCccc
Q 039097          244 GYVKTEMTY  252 (290)
Q Consensus       244 G~v~T~~~~  252 (290)
                      |.+.|++..
T Consensus       179 g~~~t~~~~  187 (276)
T PRK06482        179 GPARTNFGA  187 (276)
T ss_pred             CccccCCcc
Confidence            999988754

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-30  Score=223.68  Aligned_cols=222  Identities=22%  Similarity=0.220  Sum_probs=176.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|+++||||+||||++++++|+++|++|++++|+.. ..+...++++.. +.++.++++|+++.+++.++++++.
T Consensus         1 ~~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   79 (248)
T PRK07806          1 MGDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA-GGRASAVGADLTDEESVAALMDTAR   79 (248)
T ss_pred             CCCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999754 344445555443 3458889999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|++|||||....                      ...++...+++|+.+++++++.+.|+|.+  .++||++||
T Consensus        80 ~~~~~~d~vi~~ag~~~~----------------------~~~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS  135 (248)
T PRK07806         80 EEFGGLDALVLNASGGME----------------------SGMDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTS  135 (248)
T ss_pred             HhCCCCcEEEECCCCCCC----------------------CCCCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeC
Confidence            999999999999986421                      11124568999999999999999999863  479999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+.....                                     .... +....|+.||++++.++++++.++  .+|+
T Consensus       136 ~~~~~~~~-------------------------------------~~~~-~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~  177 (248)
T PRK07806        136 HQAHFIPT-------------------------------------VKTM-PEYEPVARSKRAGEDALRALRPELAEKGIG  177 (248)
T ss_pred             chhhcCcc-------------------------------------ccCC-ccccHHHHHHHHHHHHHHHHHHHhhccCeE
Confidence            65431100                                     0000 235689999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|.||++.|++....                 ...+|+|+++.+++++...  ..+|+.+..++.
T Consensus       178 v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~--~~~g~~~~i~~~  242 (248)
T PRK07806        178 FVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTAP--VPSGHIEYVGGA  242 (248)
T ss_pred             EEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcc--ccCccEEEecCc
Confidence            99999999998764321                 2458999999999998843  478888776654

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.7e-30  Score=216.80  Aligned_cols=189  Identities=21%  Similarity=0.211  Sum_probs=159.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++||||++|||+++|++|+++ ++|++.+|+..                  .++||+++.+++++++++    ++++|+
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------~~~~D~~~~~~~~~~~~~----~~~id~   58 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------DVQVDITDPASIRALFEK----VGKVDA   58 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------ceEecCCChHHHHHHHHh----cCCCCE
Confidence            6999999999999999999999 99999999853                  268999999999998875    478999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      +|||||.....+..                +.+.++|++.+++|+.+++++++.+.|+|++  .++|+++||..+..+. 
T Consensus        59 lv~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~-  119 (199)
T PRK07578         59 VVSAAGKVHFAPLA----------------EMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPI-  119 (199)
T ss_pred             EEECCCCCCCCchh----------------hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCC-
Confidence            99999975433322                2388999999999999999999999999974  4799999998876543 


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEeeccee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYV  246 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v~PG~v  246 (290)
                                                                ++...|+++|+++++++++++.|+ .+++||+|+||++
T Consensus       120 ------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v  157 (199)
T PRK07578        120 ------------------------------------------PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVL  157 (199)
T ss_pred             ------------------------------------------CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcc
Confidence                                                      566899999999999999999998 5899999999999


Q ss_pred             ecCcccC------CCCCChhhhccchhhhhhccCCCCceeEee
Q 039097          247 KTEMTYN------AGRLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       247 ~T~~~~~------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      .|++...      ....+||++|+.++.++..   ..+|+.|.
T Consensus       158 ~t~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~  197 (199)
T PRK07578        158 TESLEKYGPFFPGFEPVPAARVALAYVRSVEG---AQTGEVYK  197 (199)
T ss_pred             cCchhhhhhcCCCCCCCCHHHHHHHHHHHhcc---ceeeEEec
Confidence            9997432      2357899999988877653   46777665

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.4e-30  Score=212.82  Aligned_cols=183  Identities=32%  Similarity=0.466  Sum_probs=161.3

Q ss_pred             CCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh-hc
Q 039097            5 AKRYAVVTGAN-KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS-HF   82 (290)
Q Consensus         5 ~~k~~lITGgs-~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~   82 (290)
                      +-|++||||++ ||||.++|+.|+++|+.|+.++|+.+...+...+.      .+.....|+++++++.++..++++ .+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~------gl~~~kLDV~~~~~V~~v~~evr~~~~   79 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF------GLKPYKLDVSKPEEVVTVSGEVRANPD   79 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh------CCeeEEeccCChHHHHHHHHHHhhCCC
Confidence            35788999887 79999999999999999999999977654433222      388899999999999999999999 78


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |++|+|+||||.....|..+.                +.++++++|++|++|.+++++++..++.+. .|.|||+.|..+
T Consensus        80 Gkld~L~NNAG~~C~~Pa~d~----------------~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~  142 (289)
T KOG1209|consen   80 GKLDLLYNNAGQSCTFPALDA----------------TIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAG  142 (289)
T ss_pred             CceEEEEcCCCCCcccccccC----------------CHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeE
Confidence            999999999999877776655                899999999999999999999999666554 599999999999


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-C-CeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-P-NFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~-~i~vn~  240 (290)
                      ..++                                           |-...|++||+|+.+++++|..|+ | |++|..
T Consensus       143 ~vpf-------------------------------------------pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin  179 (289)
T KOG1209|consen  143 VVPF-------------------------------------------PFGSIYSASKAAIHAYARTLRLELKPFGVRVIN  179 (289)
T ss_pred             Eecc-------------------------------------------chhhhhhHHHHHHHHhhhhcEEeeeccccEEEE
Confidence            9887                                           567899999999999999999999 3 999999


Q ss_pred             eecceeecCcccC
Q 039097          241 VCPGYVKTEMTYN  253 (290)
Q Consensus       241 v~PG~v~T~~~~~  253 (290)
                      +.||.|.|++...
T Consensus       180 ~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  180 AITGGVATDIADK  192 (289)
T ss_pred             ecccceecccccC
Confidence            9999999998666

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.97  E-value=8.6e-30  Score=221.71  Aligned_cols=187  Identities=35%  Similarity=0.474  Sum_probs=159.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc--HHHHHHHHHhcCC-CcEEEEEeeCCC-HHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG--GLEAVEKLKHSGF-DNVIFHQLDVAD-PAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~--~~~~~~~l~~~~~-~~~~~~~~Dl~~-~~~v~~~~~~~   78 (290)
                      ++++|+++||||++|||+++|++|+++|++|+++.|+...  .+...+... ... ..+.+..+|+++ .++++.+++++
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dvs~~~~~v~~~~~~~   80 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-EAGGGRAAAVAADVSDDEESVEALVAAA   80 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-hcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999999988888664  333333333 222 357888999998 99999999999


Q ss_pred             HhhcCCccEEEEccccCCCC-CCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           79 RSHFGKLDILVNNAGITGIS-SDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      .+.+|++|++|||||+.... +..                +.+.++|++++++|+.+++.+++.+.|.++++   +||++
T Consensus        81 ~~~~g~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~i  141 (251)
T COG1028          81 EEEFGRIDILVNNAGIAGPDAPLE----------------ELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNI  141 (251)
T ss_pred             HHHcCCCCEEEECCCCCCCCCChh----------------hCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEE
Confidence            99999999999999987642 333                23789999999999999999999888888833   99999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCC-chhhhhhHHHHHHHHHHHHhhC--C
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPAN-AAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      ||..+. ..                                           ++ ..+|++||+|+.+|++.++.|+  .
T Consensus       142 sS~~~~-~~-------------------------------------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~  177 (251)
T COG1028         142 SSVAGL-GG-------------------------------------------PPGQAAYAASKAALIGLTKALALELAPR  177 (251)
T ss_pred             CCchhc-CC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence            999887 53                                           33 3899999999999999999887  4


Q ss_pred             CeEEEEeecceeecCcccC
Q 039097          235 NFCINCVCPGYVKTEMTYN  253 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~  253 (290)
                      ||+||+|+||++.|++.+.
T Consensus       178 gi~v~~v~PG~~~t~~~~~  196 (251)
T COG1028         178 GIRVNAVAPGYIDTPMTAA  196 (251)
T ss_pred             CcEEEEEEeccCCCcchhh
Confidence            8999999999999999775

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.8e-30  Score=221.39  Aligned_cols=198  Identities=24%  Similarity=0.268  Sum_probs=163.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++++||||+||||++++++|+++|++|++++|+++.+++..++    . .++.+++||+++.++++++++++..   .+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~~---~~d   73 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----S-ANIFTLAFDVTDHPGTKAALSQLPF---IPE   73 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----c-CCCeEEEeeCCCHHHHHHHHHhccc---CCC
Confidence            7899999999999999999999999999999997655443332    2 3578899999999999999987642   479


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      .+|+|||.....+..                +.+.++|++++++|+.+++++++.+.|+|++  +++||++||..+..+.
T Consensus        74 ~~i~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~  135 (240)
T PRK06101         74 LWIFNAGDCEYMDDG----------------KVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELAL  135 (240)
T ss_pred             EEEEcCcccccCCCC----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCC
Confidence            999999964322111                2378999999999999999999999999863  4789999998876543


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|+++|+++++++++++.|+  .+++++++.||
T Consensus       136 -------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg  172 (240)
T PRK06101        136 -------------------------------------------PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPG  172 (240)
T ss_pred             -------------------------------------------CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCC
Confidence                                                       456789999999999999999988  58999999999


Q ss_pred             eeecCcccCC----C-CCChhhhccchhhhhhcc
Q 039097          245 YVKTEMTYNA----G-RLTVEEGAESPVWLALLH  273 (290)
Q Consensus       245 ~v~T~~~~~~----~-~~~~e~~a~~~~~l~~~~  273 (290)
                      ++.|++....    + ..+|+++++.++..+...
T Consensus       173 ~i~t~~~~~~~~~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        173 FVATPLTDKNTFAMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             cCCCCCcCCCCCCCCcccCHHHHHHHHHHHHhcC
Confidence            9999986643    2 358999999988776654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.7e-29  Score=221.39  Aligned_cols=207  Identities=31%  Similarity=0.419  Sum_probs=176.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++++|||||+|+||+++++.|+++|++|++++|++.+.++..+++...+ .++.++.+|+++.+++.++++++.++++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   79 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-GEALVVPTDVSDAEACERLIEAAVARFGGI   79 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999887777766665543 468889999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhccccccccc-ChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQ-TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      |++|||||........                +. +.+.+.+.+++|+.+++.+++.+.++|.+. .++||++||..+..
T Consensus        80 d~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~  142 (263)
T PRK06181         80 DILVNNAGITMWSRFD----------------ELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLT  142 (263)
T ss_pred             CEEEECCCcccccchh----------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccC
Confidence            9999999976433221                22 678899999999999999999999998755 48999999988765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|+++|+++++++++++.++  .+++++++.
T Consensus       143 ~~-------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~  179 (263)
T PRK06181        143 GV-------------------------------------------PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVC  179 (263)
T ss_pred             CC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEe
Confidence            43                                           456789999999999999999988  489999999


Q ss_pred             cceeecCcccCC----------------CCCChhhhccchhhhhhcc
Q 039097          243 PGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       243 PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~  273 (290)
                      ||++.|++.+..                ...+|+++++.+++++...
T Consensus       180 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        180 PGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             cCccccCcchhhccccccccccccccccCCCCHHHHHHHHHHHhhCC
Confidence            999999975421                2468999999999988753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.6e-30  Score=219.23  Aligned_cols=207  Identities=23%  Similarity=0.210  Sum_probs=170.1

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEEE
Q 039097           10 VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILV   89 (290)
Q Consensus        10 lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~li   89 (290)
                      |||||++|||++++++|+++|++|++++|++++.++..++++.  +.++.++.+|+++.+++.+++++    ++++|++|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li   74 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--GAPVRTAALDITDEAAVDAFFAE----AGPFDHVV   74 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHh----cCCCCEEE
Confidence            6999999999999999999999999999998776666655542  34588899999999999998876    47899999


Q ss_pred             EccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccch
Q 039097           90 NNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTH  169 (290)
Q Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~  169 (290)
                      ||||.....+..                +.+.+++++++++|+.+++++++  .+.+.  +.++||++||..+..+.   
T Consensus        75 ~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~---  131 (230)
T PRK07041         75 ITAADTPGGPVR----------------ALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPS---  131 (230)
T ss_pred             ECCCCCCCCChh----------------hCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCC---
Confidence            999986543322                23789999999999999999999  34443  46899999999876543   


Q ss_pred             hhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeecC
Q 039097          170 EWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTE  249 (290)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  249 (290)
                                                              ++...|+++|+++++++++++.|+.++|||+++||++.|+
T Consensus       132 ----------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~  171 (230)
T PRK07041        132 ----------------------------------------ASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTP  171 (230)
T ss_pred             ----------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccH
Confidence                                                    4567899999999999999999997799999999999998


Q ss_pred             cccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          250 MTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       250 ~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +....                   ...+|+|+|+.+++++..  ...+|+.+..++.
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg  226 (230)
T PRK07041        172 LWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGG  226 (230)
T ss_pred             HHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCC
Confidence            75431                   113689999999999874  3477888777664

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.7e-29  Score=215.03  Aligned_cols=217  Identities=26%  Similarity=0.323  Sum_probs=176.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++||||+++||++++++|+++|++|++++|++++.++.    ...   .+.++.+|+++.++++++++++..  +++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~---~~~~~~~D~~~~~~v~~~~~~~~~--~~~d   72 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL---GAEALALDVADPASVAGLAWKLDG--EALD   72 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc---cceEEEecCCCHHHHHHHHHHhcC--CCCC
Confidence            6899999999999999999999999999999997655432    221   256789999999999998887643  4799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ++|||+|........              ..+.+.++|++.+++|+.+++.+++.+.|.|.+. .+++|++||..+..+.
T Consensus        73 ~vi~~ag~~~~~~~~--------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~  137 (222)
T PRK06953         73 AAVYVAGVYGPRTEG--------------VEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGD  137 (222)
T ss_pred             EEEECCCcccCCCCC--------------cccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCccccccc
Confidence            999999986322110              1123889999999999999999999999988654 5899999998776542


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..                                        ......|+++|++++++++.++.++++++||+|+||++
T Consensus       138 ~~----------------------------------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i  177 (222)
T PRK06953        138 AT----------------------------------------GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWV  177 (222)
T ss_pred             cc----------------------------------------CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCee
Confidence            00                                        01123699999999999999999999999999999999


Q ss_pred             ecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          247 KTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       247 ~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|++.+..+++++++.++.++..+........|.|++.++.
T Consensus       178 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        178 RTDMGGAQAALDPAQSVAGMRRVIAQATRRDNGRFFQYDGV  218 (222)
T ss_pred             ecCCCCCCCCCCHHHHHHHHHHHHHhcCcccCceEEeeCCc
Confidence            99998887788999999998887666666789999976543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.3e-29  Score=247.94  Aligned_cols=224  Identities=27%  Similarity=0.273  Sum_probs=191.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+.||++|||||+||||+++|++|+++|++|++++|+.+..+...+++...  ..+.++.+|+++.+++.++++++.+.+
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999999999988777766666443  368899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC-CeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~-~~iV~isS~~  161 (290)
                      +++|++|||||.....+..+                .+.++|++.+++|+.+++.+++.+.+.|++++. ++||++||..
T Consensus       497 g~iDvvI~~AG~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~  560 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEE----------------TSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN  560 (681)
T ss_pred             CCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence            99999999999875544333                389999999999999999999999999987664 8999999988


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|++++++++.++.++  .+|+||
T Consensus       561 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn  597 (681)
T PRK08324        561 AVNPG-------------------------------------------PNFGAYGAAKAAELHLVRQLALELGPDGIRVN  597 (681)
T ss_pred             ccCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            76543                                           456899999999999999999998  479999


Q ss_pred             Eeeccee--ecCcccCC---------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYV--KTEMTYNA---------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v--~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .|.||++  .|+++...                           ...+++|+++.+++++.......+|+.+..++.
T Consensus       598 ~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        598 GVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG  674 (681)
T ss_pred             EEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            9999999  77754320                           135889999999999875556788998887764

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=4.3e-29  Score=215.53  Aligned_cols=221  Identities=18%  Similarity=0.215  Sum_probs=184.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||+|+||.++++.|+++|++|++++|++++.+...+++...  .++.++++|+++.+++.++++++...+
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY--GNIHYVVGDVSSTESARNVIEKAAKVL   79 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            688999999999999999999999999999999999987766655555432  258889999999999999999998888


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|.+|+++|.....+.                  .+.+++++.+++|+.+++.+++.++|.+++  ++++|++||..+
T Consensus        80 ~~id~ii~~ag~~~~~~~------------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~  139 (238)
T PRK05786         80 NAIDGLVVTVGGYVEDTV------------------EEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSG  139 (238)
T ss_pred             CCCCEEEEcCCCcCCCch------------------HHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchh
Confidence            999999999997532211                  134889999999999999999999999864  489999999866


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ....                                          .+....|+.+|++++.++++++.++  ++++++.
T Consensus       140 ~~~~------------------------------------------~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~  177 (238)
T PRK05786        140 IYKA------------------------------------------SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNG  177 (238)
T ss_pred             cccC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            4311                                          0345789999999999999999998  5899999


Q ss_pred             eecceeecCcccC----------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYN----------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~----------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |.||++.|++...          ....+++++++.+++++..+....+|.++..++.
T Consensus       178 i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~~~~~  234 (238)
T PRK05786        178 IAPTTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIPVDGG  234 (238)
T ss_pred             EecCccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHHhcccccCccCCEEEECCc
Confidence            9999999986422          1246899999999999988777788988887764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=8.6e-30  Score=208.19  Aligned_cols=163  Identities=36%  Similarity=0.555  Sum_probs=145.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC--cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD--EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |++|||||++|||+++|++|+++|. .|++++|+  .+..++..++++..+ .++.++++|+++.++++++++++.+.++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG-AKITFIECDLSDPESIRALIEEVIKRFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT-SEEEEEESETTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc-cccccccccccccccccccccccccccc
Confidence            7999999999999999999999965 78888998  666777777777555 6799999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||.....+..+                .+.++|++++++|+.+++.+.+.++|    ++.++||++||..+.
T Consensus        80 ~ld~li~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~  139 (167)
T PF00106_consen   80 PLDILINNAGIFSDGSLDD----------------LSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGV  139 (167)
T ss_dssp             SESEEEEECSCTTSBSGGG----------------SHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGT
T ss_pred             ccccccccccccccccccc----------------ccchhhhhccccccceeeeeeehhee----ccccceEEecchhhc
Confidence            9999999999986444333                38899999999999999999999999    357999999999998


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      .+.                                           ++...|+++|+|+.+|+++++.|+
T Consensus       140 ~~~-------------------------------------------~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  140 RGS-------------------------------------------PGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             SSS-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHhc
Confidence            865                                           678999999999999999999985

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=4.4e-29  Score=215.61  Aligned_cols=203  Identities=31%  Similarity=0.339  Sum_probs=171.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |+++++|+++||||+|+||+++|++|+++|+ +|++++|+.++.++        .+.++.++.+|+++.+++.++++.  
T Consensus         1 ~~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          1 MMDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------LGPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------cCCceEEEEecCCCHHHHHHHHHh--
Confidence            7888999999999999999999999999999 99999999765443        234688999999999999888775  


Q ss_pred             hhcCCccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                        ++++|++||+||... ..+..                +.+.+++.+.+++|+.+++.+++++.|.+++.+.+++|++|
T Consensus        71 --~~~id~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~s  132 (238)
T PRK08264         71 --ASDVTILVNNAGIFRTGSLLL----------------EGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVL  132 (238)
T ss_pred             --cCCCCEEEECCCcCCCCCccc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEc
Confidence              468999999999832 22222                23889999999999999999999999999887789999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|+.+|++++++++.++.++  .++
T Consensus       133 S~~~~~~~-------------------------------------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i  169 (238)
T PRK08264        133 SVLSWVNF-------------------------------------------PNLGTYSASKAAAWSLTQALRAELAPQGT  169 (238)
T ss_pred             ChhhccCC-------------------------------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCe
Confidence            98776543                                           456789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC--CCCChhhhccchhhhhhccC
Q 039097          237 CINCVCPGYVKTEMTYNA--GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~--~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +++.+.||.++|++....  ...+++++++.++..+....
T Consensus       170 ~~~~v~pg~v~t~~~~~~~~~~~~~~~~a~~~~~~~~~~~  209 (238)
T PRK08264        170 RVLGVHPGPIDTDMAAGLDAPKASPADVARQILDALEAGD  209 (238)
T ss_pred             EEEEEeCCcccccccccCCcCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999986543  35788999999888776544

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.8e-29  Score=216.81  Aligned_cols=203  Identities=24%  Similarity=0.264  Sum_probs=163.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH-HHhhc---C
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF-IRSHF---G   83 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~~---~   83 (290)
                      ++|||||+||||+++|++|+++|++|++++|+..+.  .    ....+.++.++++|+++.+++++++++ +.+.+   +
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~   76 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA   76 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence            799999999999999999999999999999986531  1    112234688999999999999998877 55544   3


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|++|||||........               .+.+.+++++.+++|+.+++.+++.+.+.|.++..++||++||..+.
T Consensus        77 ~~~~~v~~ag~~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~  141 (243)
T PRK07023         77 SRVLLINNAGTVEPIGPL---------------ATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAAR  141 (243)
T ss_pred             CceEEEEcCcccCCCCcc---------------ccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhc
Confidence            799999999986432111               12378999999999999999999999999988777899999998776


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEee
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVC  242 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v~  242 (290)
                      .+.                                           ++...|+++|++++++++.++.+. .+++++.|+
T Consensus       142 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~  178 (243)
T PRK07023        142 NAY-------------------------------------------AGWSVYCATKAALDHHARAVALDANRALRIVSLA  178 (243)
T ss_pred             CCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEec
Confidence            543                                           456899999999999999999885 489999999


Q ss_pred             cceeecCcccC---------------------CCCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYN---------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~---------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||+++|++...                     ....+|+++|+.++..+..+.
T Consensus       179 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        179 PGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             CCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccc
Confidence            99999987321                     124578999986655554443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=9.9e-29  Score=213.00  Aligned_cols=219  Identities=33%  Similarity=0.429  Sum_probs=182.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +||||++++||.+++++|+++|++|++++|+. +......+.+...+ .++.++.+|+++.++++++++++.+.++++|+
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG-VKALGVVCDVSDREDVKAVVEEIEEELGPIDI   79 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            58999999999999999999999999999875 34444445554433 45889999999999999999999999999999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      +||+||........                +.+.+++++.+++|+.+++.+++.+.+.+.+...+++|++||..+..+. 
T Consensus        80 vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~-  142 (239)
T TIGR01830        80 LVNNAGITRDNLLM----------------RMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN-  142 (239)
T ss_pred             EEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC-
Confidence            99999986433222                2277899999999999999999999999877677899999998877653 


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecce
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGY  245 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG~  245 (290)
                                                                ++...|+++|++++.+++.++.++  ++++++.++||+
T Consensus       143 ------------------------------------------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~  180 (239)
T TIGR01830       143 ------------------------------------------AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGF  180 (239)
T ss_pred             ------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECC
Confidence                                                      455789999999999999999987  699999999999


Q ss_pred             eecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          246 VKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       246 v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +.|++....               ...+++++++.+++++.......+|+++..++.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       181 IDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             CCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999875432               134789999999988876666688998887653

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=6.6e-29  Score=215.14  Aligned_cols=187  Identities=30%  Similarity=0.481  Sum_probs=164.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +..+|.|+|||..+|+|+.+|++|.++|+.|++.+.+++..++...+..   ..+...++.|++++++++++.+.+.+..
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~---s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK---SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc---CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            5678999999999999999999999999999999987776666555543   4578888999999999999999999865


Q ss_pred             C--CccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           83 G--KLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        83 ~--~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +  ++-.||||||+... .+....                +.+++++++++|++|++.+++.++|++++. .|||||+||
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl----------------~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS  165 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWL----------------TVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSS  165 (322)
T ss_pred             ccccceeEEeccccccccCccccc----------------cHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecc
Confidence            4  59999999997654 443333                899999999999999999999999999876 499999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..|-.+.                                           |...+|++||+|++.++-+|..|+  -||.
T Consensus       166 ~~GR~~~-------------------------------------------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~  202 (322)
T KOG1610|consen  166 VLGRVAL-------------------------------------------PALGPYCVSKFAVEAFSDSLRRELRPFGVK  202 (322)
T ss_pred             cccCccC-------------------------------------------cccccchhhHHHHHHHHHHHHHHHHhcCcE
Confidence            9996654                                           567899999999999999999999  3999


Q ss_pred             EEEeecceeecCccc
Q 039097          238 INCVCPGYVKTEMTY  252 (290)
Q Consensus       238 vn~v~PG~v~T~~~~  252 (290)
                      |..|.||...|++..
T Consensus       203 VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  203 VSIIEPGFFKTNLAN  217 (322)
T ss_pred             EEEeccCccccccCC
Confidence            999999999999865

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.96  E-value=7.6e-29  Score=214.65  Aligned_cols=208  Identities=23%  Similarity=0.233  Sum_probs=178.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |+|++||||+.|||++.|++|+++|++|++.+|+.++++...++|.+..+-.+.++.+|+++.+.+-+-+.+..+. ..|
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cce
Confidence            5899999999999999999999999999999999999999999999888778999999999887733333332222 267


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      -+||||+|.....|.              .+.+.+.+.+++++.+|+++.+.+++.++|.|.+++.|-|||+||.+|..+
T Consensus       128 gILVNNvG~~~~~P~--------------~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p  193 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPE--------------SFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP  193 (312)
T ss_pred             EEEEecccccCCCcH--------------HHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc
Confidence            899999999764322              223346668999999999999999999999999999999999999999987


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           |....|+++|+.+..++++|..|+  .+|.|-++.|
T Consensus       194 ~-------------------------------------------p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p  230 (312)
T KOG1014|consen  194 T-------------------------------------------PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIP  230 (312)
T ss_pred             C-------------------------------------------hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeh
Confidence            6                                           678999999999999999999999  4999999999


Q ss_pred             ceeecCcccCCC----CCChhhhccchhhhhh
Q 039097          244 GYVKTEMTYNAG----RLTVEEGAESPVWLAL  271 (290)
Q Consensus       244 G~v~T~~~~~~~----~~~~e~~a~~~~~l~~  271 (290)
                      +.|.|+|.....    ..+||..++..+.-..
T Consensus       231 ~~VaTkm~~~~~~sl~~ps~~tfaksal~tiG  262 (312)
T KOG1014|consen  231 YLVATKMAKYRKPSLFVPSPETFAKSALNTIG  262 (312)
T ss_pred             hheeccccccCCCCCcCcCHHHHHHHHHhhcC
Confidence            999999977653    3478888888776655

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.9e-29  Score=199.99  Aligned_cols=226  Identities=23%  Similarity=0.228  Sum_probs=185.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.+|-+++||||.+|+|++.|++|+.+|+.|++++--..+..+..+++    ++++.+.++|++++++++.++.+.+.+|
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel----g~~~vf~padvtsekdv~aala~ak~kf   81 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL----GGKVVFTPADVTSEKDVRAALAKAKAKF   81 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh----CCceEEeccccCcHHHHHHHHHHHHhhc
Confidence            457889999999999999999999999999999998888888877777    3579999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC------CCeEEE
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD------SARIVN  156 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~------~~~iV~  156 (290)
                      |++|.+|||||+......          ...++....+.|+++.++++|++|+|++.++....|-+++      .|.|||
T Consensus        82 grld~~vncagia~a~kt----------yn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviin  151 (260)
T KOG1199|consen   82 GRLDALVNCAGIAYAFKT----------YNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIIN  151 (260)
T ss_pred             cceeeeeeccceeeeeee----------eeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEe
Confidence            999999999998642211          1233444558999999999999999999999999886543      378999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      ..|.++.-+-                                           -+..+|++||.++.+|+--+++++  .
T Consensus       152 tasvaafdgq-------------------------------------------~gqaaysaskgaivgmtlpiardla~~  188 (260)
T KOG1199|consen  152 TASVAAFDGQ-------------------------------------------TGQAAYSASKGAIVGMTLPIARDLAGD  188 (260)
T ss_pred             eceeeeecCc-------------------------------------------cchhhhhcccCceEeeechhhhhcccC
Confidence            9998765432                                           467899999999999999999999  4


Q ss_pred             CeEEEEeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          235 NFCINCVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||++.|.||.++||+....+                .-.|.|.+..+-..+.+|-  .+|..+.-++.
T Consensus       189 gir~~tiapglf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlvqaiienp~--lngevir~dga  255 (260)
T KOG1199|consen  189 GIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAIIENPY--LNGEVIRFDGA  255 (260)
T ss_pred             ceEEEeecccccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHHHHHHhCcc--cCCeEEEecce
Confidence            899999999999999988753                2256665555544444443  77877776664

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.5e-28  Score=210.48  Aligned_cols=181  Identities=23%  Similarity=0.274  Sum_probs=153.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|++|||||+||||++++++|+++|++|++++|++.+.++..+.....+ ..+.++.+|+++.+++.++++      +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRG-LALRVEKLDLTDAIDRAQAAE------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcceEEEeeCCCHHHHHHHhc------CCC
Confidence            6799999999999999999999999999999999876666555544433 358889999999999887654      389


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+||||||.....+..+                .+.+++++.+++|+.+++.+++.+++.+++.+.++||++||..+..+
T Consensus        75 d~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~  138 (257)
T PRK09291         75 DVLLNNAGIGEAGAVVD----------------IPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLIT  138 (257)
T ss_pred             CEEEECCCcCCCcCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccC
Confidence            99999999865443332                38899999999999999999999999998877789999999877654


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|++||++++.+++.++.++  .++++++|+|
T Consensus       139 ~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~p  175 (257)
T PRK09291        139 G-------------------------------------------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNP  175 (257)
T ss_pred             C-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEec
Confidence            3                                           455789999999999999999987  5899999999


Q ss_pred             ceeecCccc
Q 039097          244 GYVKTEMTY  252 (290)
Q Consensus       244 G~v~T~~~~  252 (290)
                      |++.|++..
T Consensus       176 g~~~t~~~~  184 (257)
T PRK09291        176 GPYLTGFND  184 (257)
T ss_pred             Ccccccchh
Confidence            999998743

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.7e-28  Score=209.35  Aligned_cols=196  Identities=18%  Similarity=0.158  Sum_probs=147.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||++|||+++|++|+++|++|++++|+..+..+   ... ..  ....+.+|+++.+++.+       .+
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~~-~~--~~~~~~~D~~~~~~~~~-------~~   77 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SND-ES--PNEWIKWECGKEESLDK-------QL   77 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hhc-cC--CCeEEEeeCCCHHHHHH-------hc
Confidence            4778999999999999999999999999999999998632111   111 11  12568899999988764       34


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC---CCCeEEEEcC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS---DSARIVNVSS  159 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~---~~~~iV~isS  159 (290)
                      +++|++|||||.....                   +.+.++|++++++|+.+++++++.++|.|+++   .++.++..||
T Consensus        78 ~~iDilVnnAG~~~~~-------------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss  138 (245)
T PRK12367         78 ASLDVLILNHGINPGG-------------------RQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTS  138 (245)
T ss_pred             CCCCEEEECCccCCcC-------------------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEec
Confidence            6899999999974221                   12789999999999999999999999999763   2233444455


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHH---HHHHhhC--C
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYT---RILAKKY--P  234 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~---~~la~e~--~  234 (290)
                      ..+..+                                            +....|++||+|+..+.   +.++.|+  .
T Consensus       139 ~a~~~~--------------------------------------------~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~  174 (245)
T PRK12367        139 EAEIQP--------------------------------------------ALSPSYEISKRLIGQLVSLKKNLLDKNERK  174 (245)
T ss_pred             ccccCC--------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhhccc
Confidence            444321                                            23467999999986544   4444454  5


Q ss_pred             CeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCC
Q 039097          235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG  275 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~  275 (290)
                      +++|+.+.||+++|++... ..++||++|+.+++.+...+.
T Consensus       175 ~i~v~~~~pg~~~t~~~~~-~~~~~~~vA~~i~~~~~~~~~  214 (245)
T PRK12367        175 KLIIRKLILGPFRSELNPI-GIMSADFVAKQILDQANLGLY  214 (245)
T ss_pred             ccEEEEecCCCcccccCcc-CCCCHHHHHHHHHHHHhcCCc
Confidence            8999999999999998543 357999999999998876553

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=6.1e-29  Score=205.46  Aligned_cols=228  Identities=25%  Similarity=0.229  Sum_probs=184.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.-.++|++||||+|+|||..++..+.+++-......++....+  .+.++-..++.......|++...-+.++.+..++
T Consensus         1 m~~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~   78 (253)
T KOG1204|consen    1 MDLNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRK   78 (253)
T ss_pred             CCcccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEecCCcceechHHHHHHHHHHHHhhhhh
Confidence            56677899999999999999999999988765444444433322  3333333334556667888888889999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      +.++.|++|||||...+......             .+.+.++|++.++.|+++++.+...++|.+++.+ .+.+||+||
T Consensus        79 k~gkr~iiI~NAG~lgdvsk~~~-------------~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS  145 (253)
T KOG1204|consen   79 KGGKRDIIIHNAGSLGDVSKGAV-------------DLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSS  145 (253)
T ss_pred             cCCceeEEEecCCCccchhhccC-------------CcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecc
Confidence            99999999999999876544331             1338899999999999999999999999999885 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC-CeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP-NFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-~i~v  238 (290)
                      .++..++                                           .++.+||++|+|.+++.+.||.|-| +++|
T Consensus       146 ~aav~p~-------------------------------------------~~wa~yc~~KaAr~m~f~~lA~EEp~~v~v  182 (253)
T KOG1204|consen  146 LAAVRPF-------------------------------------------SSWAAYCSSKAARNMYFMVLASEEPFDVRV  182 (253)
T ss_pred             hhhhccc-------------------------------------------cHHHHhhhhHHHHHHHHHHHhhcCccceeE
Confidence            9999887                                           5789999999999999999999997 9999


Q ss_pred             EEeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .+++||.++|+|....                     ..++|+.-|+.+..++.... ..+|++++..++
T Consensus       183 l~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~sG~~vdy~D~  251 (253)
T KOG1204|consen  183 LNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FVSGQHVDYYDE  251 (253)
T ss_pred             EEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-cccccccccccc
Confidence            9999999999996552                     14577888888888876554 688988877654

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=3.7e-27  Score=205.61  Aligned_cols=203  Identities=24%  Similarity=0.290  Sum_probs=169.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc-CC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF-GK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~   84 (290)
                      .|+++||||+|+||.++++.|+++|++|++++|+.++.+...    ..   .+..+.||+++.+++.++++++.... ++
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~---~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL---GFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC---CCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            378999999999999999999999999999999976654432    11   36788999999999999999887743 68


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|.+|||||.....+..                +.+.+++++.+++|+.|++++++.+++.|++.+.++||++||..+..
T Consensus        75 ~~~ii~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~  138 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLS----------------TISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLI  138 (256)
T ss_pred             CeEEEECCCCCCccchh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccccc
Confidence            99999999975433322                23789999999999999999999999999888788999999987765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|+++|++++.++++++.++  .+++++.+.
T Consensus       139 ~~-------------------------------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~  175 (256)
T PRK08017        139 ST-------------------------------------------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIE  175 (256)
T ss_pred             CC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEe
Confidence            43                                           456789999999999999999887  589999999


Q ss_pred             cceeecCcccCC-----------------CCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||++.|++....                 ...+|+++++.+...+..+.
T Consensus       176 pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        176 PGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             CCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            999999875431                 12689999999988887665

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.95  E-value=8.7e-27  Score=192.95  Aligned_cols=228  Identities=19%  Similarity=0.224  Sum_probs=194.8

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |..|+||++||+|-.  +.|+..||+.|.++|+.+..+..++ ++++..+++.+..+. ..+++||+++.++++++++++
T Consensus         1 ~g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           1 MGLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGS-DLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CCccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHHH
Confidence            678999999999987  6999999999999999999999886 666666666555433 577899999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .+++|++|+|||+.|+.......            ..+.+.+.|+|...+++..++..-+.+++.|.|.  ++|+||.++
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~------------G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLt  144 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELK------------GDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLT  144 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhC------------CcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEE
Confidence            99999999999999987533222            2233458999999999999999999999999998  578999998


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      =..+.+..                                           |++-..+.+|+++++-+|.||.++  .||
T Consensus       145 Ylgs~r~v-------------------------------------------PnYNvMGvAKAaLEasvRyLA~dlG~~gI  181 (259)
T COG0623         145 YLGSERVV-------------------------------------------PNYNVMGVAKAALEASVRYLAADLGKEGI  181 (259)
T ss_pred             eccceeec-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhCccCe
Confidence            77766543                                           555688999999999999999999  499


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |||+|+-||+.|--.+..                 ..+++|+++...++|+++-....+|.++.+|..
T Consensus       182 RVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiTGei~yVD~G  249 (259)
T COG0623         182 RVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGITGEIIYVDSG  249 (259)
T ss_pred             EEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcccccceEEEcCC
Confidence            999999999999654442                 246899999999999999999999999888754

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=5.4e-27  Score=202.85  Aligned_cols=207  Identities=26%  Similarity=0.250  Sum_probs=183.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCC-cEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++++|||||+|||.++|.++..+|++|.++.|+..+++++.+++...... .+.+..+|++|.+++...++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999998765532 37899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCcc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGKL  164 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~~  164 (290)
                      |.+|+|||...++-..+                .++++++..+++|+.++++++++.++.|++.. .|+|+.+||..+..
T Consensus       114 d~l~~cAG~~v~g~f~~----------------~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~  177 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFED----------------LSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAML  177 (331)
T ss_pred             ceEEEecCccccccccc----------------CCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhc
Confidence            99999999986655443                49999999999999999999999999999876 57999999999988


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC--CeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~i~vn~v~  242 (290)
                      +.                                           .++++|+++|+|+.+|..++.+|..  +|+|..+.
T Consensus       178 ~i-------------------------------------------~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~  214 (331)
T KOG1210|consen  178 GI-------------------------------------------YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYY  214 (331)
T ss_pred             Cc-------------------------------------------ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEc
Confidence            76                                           6789999999999999999999993  99999999


Q ss_pred             cceeecCcccCC---------------CCCChhhhccchhhhhhc
Q 039097          243 PGYVKTEMTYNA---------------GRLTVEEGAESPVWLALL  272 (290)
Q Consensus       243 PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~  272 (290)
                      |+.+.||.+..-               +..++|++|..++.-+..
T Consensus       215 P~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  215 PPDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             CCCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHhh
Confidence            999999986653               235777777776655443

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3.8e-26  Score=195.48  Aligned_cols=200  Identities=26%  Similarity=0.364  Sum_probs=164.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.|++|||||+|+||++++++|+++ ++|++++|+..+.++..+..     ..+.++.+|+++.+++.++++++    ++
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            3579999999999999999999999 99999999976554433322     24788999999999998888753    57


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|++||++|.....+..                ..+.++|.+++++|+.+++.+.+.+++.+++. .+++|++||..+..
T Consensus        72 id~vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~  134 (227)
T PRK08219         72 LDVLVHNAGVADLGPVA----------------ESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLR  134 (227)
T ss_pred             CCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcC
Confidence            99999999986443322                23789999999999999999999999988866 47999999987754


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCC-eEEEEeec
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN-FCINCVCP  243 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~-i~vn~v~P  243 (290)
                      +.                                           ++...|+.+|++++.+++.++.++.+ ++++++.|
T Consensus       135 ~~-------------------------------------------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~p  171 (227)
T PRK08219        135 AN-------------------------------------------PGWGSYAASKFALRALADALREEEPGNVRVTSVHP  171 (227)
T ss_pred             cC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            33                                           44578999999999999999998866 99999999


Q ss_pred             ceeecCcccC--------C---CCCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYN--------A---GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~--------~---~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |++.|++...        .   ...+++|+++.+++++..++
T Consensus       172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~~  213 (227)
T PRK08219        172 GRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFAVDAPP  213 (227)
T ss_pred             CCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence            9999886432        1   23689999999999987654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.94  E-value=1.5e-26  Score=200.70  Aligned_cols=209  Identities=30%  Similarity=0.348  Sum_probs=153.3

Q ss_pred             HHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCC
Q 039097           22 VVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDA  101 (290)
Q Consensus        22 ia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~  101 (290)
                      +|++|+++|++|++++|+.++.+     +       ..++++|+++.++++++++++.   +++|+||||||...     
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~-------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~-----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L-------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG-----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h-------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC-----
Confidence            47899999999999999876532     1       2457899999999999999874   68999999999751     


Q ss_pred             CcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccC
Q 039097          102 DTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN  181 (290)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~  181 (290)
                                         .+.+++++++|+.+++.+++.++|+|++  .|+||++||..+............+.. .  
T Consensus        61 -------------------~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~-~--  116 (241)
T PRK12428         61 -------------------TAPVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAA-T--  116 (241)
T ss_pred             -------------------CCCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhc-c--
Confidence                               2347899999999999999999999874  489999999987642100000000000 0  


Q ss_pred             cCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH-hhC--CCeEEEEeecceeecCcccCC----
Q 039097          182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA-KKY--PNFCINCVCPGYVKTEMTYNA----  254 (290)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la-~e~--~~i~vn~v~PG~v~T~~~~~~----  254 (290)
                         ..... ...+..  ..+       .++...|++||+|++++++.++ .++  .+|+||+|+||++.|+|....    
T Consensus       117 ---~~~~~-~~~~~~--~~~-------~~~~~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~  183 (241)
T PRK12428        117 ---ASFDE-GAAWLA--AHP-------VALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSML  183 (241)
T ss_pred             ---chHHH-HHHhhh--ccC-------CCcccHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhh
Confidence               00000 000000  000       1356789999999999999999 888  489999999999999986421    


Q ss_pred             -------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          255 -------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       255 -------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                                   ...+||++|+.+++++++.....+|+.+..++.
T Consensus       184 ~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~~~G~~i~vdgg  229 (241)
T PRK12428        184 GQERVDSDAKRMGRPATADEQAAVLVFLCSDAARWINGVNLPVDGG  229 (241)
T ss_pred             hhHhhhhcccccCCCCCHHHHHHHHHHHcChhhcCccCcEEEecCc
Confidence                         124799999999999987777889998888765

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=9.7e-26  Score=207.92  Aligned_cols=196  Identities=22%  Similarity=0.208  Sum_probs=152.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||+||||++++++|+++|++|++++|+.++.++..+   .. ...+..+.+|++|.+++.+.+       
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~---~~-~~~v~~v~~Dvsd~~~v~~~l-------  243 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEIN---GE-DLPVKTLHWQVGQEAALAELL-------  243 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---hc-CCCeEEEEeeCCCHHHHHHHh-------
Confidence            4678999999999999999999999999999999998765443221   11 124678899999998876543       


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC----CeEEEEc
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS----ARIVNVS  158 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~----~~iV~is  158 (290)
                      +++|++|||||.....                   +.+.+++++++++|+.|++.+++.++|.|++++.    +.+|++|
T Consensus       244 ~~IDiLInnAGi~~~~-------------------~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~S  304 (406)
T PRK07424        244 EKVDILIINHGINVHG-------------------ERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTS  304 (406)
T ss_pred             CCCCEEEECCCcCCCC-------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEc
Confidence            5799999999975321                   1278999999999999999999999999986642    3466665


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEE
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI  238 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~v  238 (290)
                      + ++. .                                           |+....|++||+|+..++. +..+..++.|
T Consensus       305 s-a~~-~-------------------------------------------~~~~~~Y~ASKaAl~~l~~-l~~~~~~~~I  338 (406)
T PRK07424        305 E-AEV-N-------------------------------------------PAFSPLYELSKRALGDLVT-LRRLDAPCVV  338 (406)
T ss_pred             c-ccc-c-------------------------------------------CCCchHHHHHHHHHHHHHH-HHHhCCCCce
Confidence            4 221 1                                           1334689999999999985 4444457888


Q ss_pred             EEeecceeecCcccCCCCCChhhhccchhhhhhccCC
Q 039097          239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG  275 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~  275 (290)
                      ..+.||++.|++.. ...++||++|+.+++.+...+.
T Consensus       339 ~~i~~gp~~t~~~~-~~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        339 RKLILGPFKSNLNP-IGVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             EEEEeCCCcCCCCc-CCCCCHHHHHHHHHHHHHCCCC
Confidence            89999999999854 3457999999999999876653

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.93  E-value=7.6e-25  Score=183.53  Aligned_cols=234  Identities=21%  Similarity=0.268  Sum_probs=184.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-----CeEEEEecCcccHHHHHHHHHhcCCC---cEEEEEeeCCCHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG-----IITVLTARDEKGGLEAVEKLKHSGFD---NVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g-----~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~v~~~~   75 (290)
                      |..|++||||+++|||.++|+||++..     .++++++|+-+++++++..++...++   ++.++.+|+++..++.++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence            357999999999999999999999875     36889999999999999999887653   6889999999999999999


Q ss_pred             HHHHhhcCCccEEEEccccCCCCCCCCccc-----------chhhhcccccccccChHHHHHhhhcccchHHHHHHHhch
Q 039097           76 DFIRSHFGKLDILVNNAGITGISSDADTLS-----------GFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~  144 (290)
                      +++.++|.++|.+..|||++....+....-           .++.-.......-.+.|++..+|++||+|+|.+.+.+.|
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            999999999999999999986444332100           000001111222458899999999999999999999999


Q ss_pred             hhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHH
Q 039097          145 LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNA  224 (290)
Q Consensus       145 ~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~  224 (290)
                      ++..+..+.+|++||..+.....               +.+++--.                   .+..+|..||.++.-
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~l---------------sleD~q~~-------------------kg~~pY~sSKrl~Dl  206 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNL---------------SLEDFQHS-------------------KGKEPYSSSKRLTDL  206 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccC---------------CHHHHhhh-------------------cCCCCcchhHHHHHH
Confidence            99888778999999998765443               33333221                   456789999999999


Q ss_pred             HHHHHHhhCC--CeEEEEeecceeecCcccCCC-----------------------CCChhhhccchhhhhh
Q 039097          225 YTRILAKKYP--NFCINCVCPGYVKTEMTYNAG-----------------------RLTVEEGAESPVWLAL  271 (290)
Q Consensus       225 ~~~~la~e~~--~i~vn~v~PG~v~T~~~~~~~-----------------------~~~~e~~a~~~~~l~~  271 (290)
                      +.-.+-+.+.  |+.-++++||...|.+...+.                       ..+|=.+|..++|...
T Consensus       207 Lh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~~~~~~~~~~~fyl~rllgspwh~id~y~aa~A~vw~~l  278 (341)
T KOG1478|consen  207 LHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLNPFTYFGMLCGFYLARLLGSPWHNIDPYKAANAPVWVTL  278 (341)
T ss_pred             HHHHHhccccccchhhhcccCceeecchhhhhhhhHHHHHHHHHHHHHHHhcCcccccCccccccchhhhhh
Confidence            9887777774  677789999999999877641                       2467777888888754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=6.7e-24  Score=228.44  Aligned_cols=183  Identities=18%  Similarity=0.159  Sum_probs=153.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcc------------------------------------------
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEK------------------------------------------   41 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~------------------------------------------   41 (290)
                      +++++|||||++|||+++|++|+++ |++|++++|++.                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5789999999999999999999998 699999999821                                          


Q ss_pred             -----cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccc
Q 039097           42 -----GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK  116 (290)
Q Consensus        42 -----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~  116 (290)
                           ...+.++.+.. .+.++.++.||++|.++++++++++.+. ++||+||||||+.......+              
T Consensus      2076 ~~~~~ei~~~la~l~~-~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~-------------- 2139 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKA-AGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQD-------------- 2139 (2582)
T ss_pred             cchhHHHHHHHHHHHh-cCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCccc--------------
Confidence                 00111222222 2356889999999999999999999887 68999999999875444332              


Q ss_pred             cccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHh
Q 039097          117 MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLN  196 (290)
Q Consensus       117 ~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (290)
                        .+.++|+++|++|+.|.+++++.+.+.+    .++||++||..|..+.                              
T Consensus      2140 --~t~e~f~~v~~~nv~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~------------------------------ 2183 (2582)
T TIGR02813      2140 --KTLEEFNAVYGTKVDGLLSLLAALNAEN----IKLLALFSSAAGFYGN------------------------------ 2183 (2582)
T ss_pred             --CCHHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEEechhhcCCC------------------------------
Confidence              3899999999999999999999986643    3579999999988765                              


Q ss_pred             hhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeecCccc
Q 039097          197 DYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTY  252 (290)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~  252 (290)
                                   ++...|+++|++++.+++.++.++++++|++|+||+++|+|..
T Consensus      2184 -------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2184 -------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             -------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCCccc
Confidence                         5678999999999999999999999999999999999999853

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=1.3e-22  Score=165.92  Aligned_cols=175  Identities=25%  Similarity=0.181  Sum_probs=141.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHH---HHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEA---VEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |+++||||+++||.+++++|+++|+ .|++++|+....+..   .++++.. +.++.++.+|++++++++++++++...+
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL-GAEVTVVACDVADRAALAAALAAIPARL   79 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            6799999999999999999999997 688888876554332   2344333 3468889999999999999999999989


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++||+||.....+..                ..+.+++++.+++|+.+++.+.+.+.    +...++||++||..+
T Consensus        80 ~~id~li~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~~  139 (180)
T smart00822       80 GPLRGVIHAAGVLDDGLLA----------------NLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVAG  139 (180)
T ss_pred             CCeeEEEEccccCCccccc----------------cCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHHH
Confidence            9999999999976433322                23789999999999999999999984    335589999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ..+.                                           ++...|+++|+++..+++.++.  .++++..+.
T Consensus       140 ~~~~-------------------------------------------~~~~~y~~sk~~~~~~~~~~~~--~~~~~~~~~  174 (180)
T smart00822      140 VLGN-------------------------------------------PGQANYAAANAFLDALAAHRRA--RGLPATSIN  174 (180)
T ss_pred             hcCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHh--cCCceEEEe
Confidence            6543                                           4567899999999999987764  467799999


Q ss_pred             cceee
Q 039097          243 PGYVK  247 (290)
Q Consensus       243 PG~v~  247 (290)
                      ||++.
T Consensus       175 ~g~~~  179 (180)
T smart00822      175 WGAWA  179 (180)
T ss_pred             ecccc
Confidence            99875

It uses NADPH to reduce the keto group to a hydroxy group.

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.89  E-value=1.3e-21  Score=172.61  Aligned_cols=231  Identities=19%  Similarity=0.177  Sum_probs=182.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH--HHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA--VEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |....+++|+||||+|.||++++++|+++||.|..+.|++++.+..  +.+++.. +.++..+..|++++++++++++  
T Consensus         1 m~~~~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a-~~~l~l~~aDL~d~~sf~~ai~--   77 (327)
T KOG1502|consen    1 MDQDEGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA-KERLKLFKADLLDEGSFDKAID--   77 (327)
T ss_pred             CCCCCCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC-cccceEEeccccccchHHHHHh--
Confidence            6666889999999999999999999999999999999999884432  3333322 3469999999999999999998  


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEE
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~i  157 (290)
                           ++|+|+|.|........                     +.-.+.++..+.|+.++++++.    +.. -.|||++
T Consensus        78 -----gcdgVfH~Asp~~~~~~---------------------~~e~~li~pav~Gt~nVL~ac~----~~~sVkrvV~T  127 (327)
T KOG1502|consen   78 -----GCDGVFHTASPVDFDLE---------------------DPEKELIDPAVKGTKNVLEACK----KTKSVKRVVYT  127 (327)
T ss_pred             -----CCCEEEEeCccCCCCCC---------------------CcHHhhhhHHHHHHHHHHHHHh----ccCCcceEEEe
Confidence                 69999999998743221                     1123789999999999999994    333 5899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                      ||.++..... ..+......+...|++.+++.-..                    ..|+.||...+..++.++.|. ++.
T Consensus       128 SS~aAv~~~~-~~~~~~~vvdE~~wsd~~~~~~~~--------------------~~Y~~sK~lAEkaAw~fa~e~-~~~  185 (327)
T KOG1502|consen  128 SSTAAVRYNG-PNIGENSVVDEESWSDLDFCRCKK--------------------LWYALSKTLAEKAAWEFAKEN-GLD  185 (327)
T ss_pred             ccHHHhccCC-cCCCCCcccccccCCcHHHHHhhH--------------------HHHHHHHHHHHHHHHHHHHhC-Ccc
Confidence            9999876541 122333444556677777765322                    469999999999999999998 899


Q ss_pred             EEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +.+|.||.|..|....-                        ..++..|+|...+..+-.+.  ..|+|+......
T Consensus       186 lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a~E~~~--a~GRyic~~~~~  258 (327)
T KOG1502|consen  186 LVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLALEKPS--AKGRYICVGEVV  258 (327)
T ss_pred             EEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHHHcCcc--cCceEEEecCcc
Confidence            99999999999976651                        13588999999999988888  779999876643

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=1.5e-21  Score=176.71  Aligned_cols=189  Identities=19%  Similarity=0.172  Sum_probs=142.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++|++|||||+|+||++++++|+++|  ++|++++|+..+.....+.+.   ..++.++.+|++|.+++.++++     
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~~~~~~v~~Dl~d~~~l~~~~~-----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP---APCLRFFIGDVRDKERLTRALR-----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC---CCcEEEEEccCCCHHHHHHHHh-----
Confidence            568999999999999999999999986  789999988654433322221   2358899999999999888775     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+||.... +.                   ...+..+++++|+.+++++++++.+    .+.++||++||..
T Consensus        74 --~iD~Vih~Ag~~~~-~~-------------------~~~~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~  127 (324)
T TIGR03589        74 --GVDYVVHAAALKQV-PA-------------------AEYNPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDK  127 (324)
T ss_pred             --cCCEEEECcccCCC-ch-------------------hhcCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCC
Confidence              58999999997532 11                   1122346899999999999999964    3457999999964


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      ...                                              +...|++||++.+.+++.++.+.  .+++++
T Consensus       128 ~~~----------------------------------------------p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~  161 (324)
T TIGR03589       128 AAN----------------------------------------------PINLYGATKLASDKLFVAANNISGSKGTRFS  161 (324)
T ss_pred             CCC----------------------------------------------CCCHHHHHHHHHHHHHHHHHhhccccCcEEE
Confidence            322                                              23579999999999999987665  589999


Q ss_pred             EeecceeecCccc-----------C---C---------CCCChhhhccchhhhhhc
Q 039097          240 CVCPGYVKTEMTY-----------N---A---------GRLTVEEGAESPVWLALL  272 (290)
Q Consensus       240 ~v~PG~v~T~~~~-----------~---~---------~~~~~e~~a~~~~~l~~~  272 (290)
                      ++.||.+.++-..           .   .         ..+.++|+++.++..+..
T Consensus       162 ~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~  217 (324)
T TIGR03589       162 VVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLER  217 (324)
T ss_pred             EEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhh
Confidence            9999999875210           0   0         024678888887776653

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.87  E-value=7.3e-21  Score=180.03  Aligned_cols=194  Identities=18%  Similarity=0.199  Sum_probs=145.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-----C---CCcEEEEEeeCCCHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-----G---FDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-----~---~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      ..+||++|||||+|+||++++++|+++|++|++++|+.++++...+++...     +   ..++.++.+|+++.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            357899999999999999999999999999999999988877666555321     1   13588999999999887654


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      +       +++|+||||+|....                      ...++...+++|+.+..++++++.+    .+.++|
T Consensus       157 L-------ggiDiVVn~AG~~~~----------------------~v~d~~~~~~VN~~Gt~nLl~Aa~~----agVgRI  203 (576)
T PLN03209        157 L-------GNASVVICCIGASEK----------------------EVFDVTGPYRIDYLATKNLVDAATV----AKVNHF  203 (576)
T ss_pred             h-------cCCCEEEEccccccc----------------------cccchhhHHHHHHHHHHHHHHHHHH----hCCCEE
Confidence            3       579999999996421                      1124667889999999999999843    356899


Q ss_pred             EEEcCCCCcc-cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          155 VNVSSSLGKL-MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       155 V~isS~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      |++||..+.. +.                                           + ...|. +|.++..+.+.+..++
T Consensus       204 V~VSSiga~~~g~-------------------------------------------p-~~~~~-sk~~~~~~KraaE~~L  238 (576)
T PLN03209        204 ILVTSLGTNKVGF-------------------------------------------P-AAILN-LFWGVLCWKRKAEEAL  238 (576)
T ss_pred             EEEccchhcccCc-------------------------------------------c-ccchh-hHHHHHHHHHHHHHHH
Confidence            9999986531 11                                           0 01233 5666666666666555


Q ss_pred             --CCeEEEEeecceeecCcccC---------------CCCCChhhhccchhhhhhccC
Q 039097          234 --PNFCINCVCPGYVKTEMTYN---------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~---------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                        .+++++.|.||++.|++...               .+..+++++|+.+++++.+++
T Consensus       239 ~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~  296 (576)
T PLN03209        239 IASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR  296 (576)
T ss_pred             HHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCch
Confidence              58999999999998876431               123588999999999988665

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.86  E-value=1.1e-20  Score=172.66  Aligned_cols=186  Identities=19%  Similarity=0.106  Sum_probs=138.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++|++|||||+|+||++++++|+++|++|++++|+........+.+..  ..++.++.+|+++.+++.+++++.     
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--AKKIEDHFGDIRDAAKLRKAIAEF-----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--cCCceEEEccCCCHHHHHHHHhhc-----
Confidence            4689999999999999999999999999999999987654433333321  235778899999999999988864     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||+||.....                    .+.+++...+++|+.+++++++++.+.   ...+++|++||...+
T Consensus        75 ~~d~vih~A~~~~~~--------------------~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vy  131 (349)
T TIGR02622        75 KPEIVFHLAAQPLVR--------------------KSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCY  131 (349)
T ss_pred             CCCEEEECCcccccc--------------------cchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhh
Confidence            689999999954211                    145667789999999999999998431   124699999997543


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC------CCeE
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY------PNFC  237 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~------~~i~  237 (290)
                      .....                              ..+..+... ..+...|+.||.+.+.+++.++.++      ++++
T Consensus       132 g~~~~------------------------------~~~~~e~~~-~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~  180 (349)
T TIGR02622       132 RNDEW------------------------------VWGYRETDP-LGGHDPYSSSKACAELVIASYRSSFFGVANFHGIK  180 (349)
T ss_pred             CCCCC------------------------------CCCCccCCC-CCCCCcchhHHHHHHHHHHHHHHHhhcccccCCCc
Confidence            21100                              000000000 1235689999999999999998876      3899


Q ss_pred             EEEeecceeecCc
Q 039097          238 INCVCPGYVKTEM  250 (290)
Q Consensus       238 vn~v~PG~v~T~~  250 (290)
                      ++.+.||.+.+|.
T Consensus       181 ~~~lR~~~vyGp~  193 (349)
T TIGR02622       181 IASARAGNVIGGG  193 (349)
T ss_pred             EEEEccCcccCCC
Confidence            9999999998874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=6.2e-20  Score=165.84  Aligned_cols=198  Identities=19%  Similarity=0.175  Sum_probs=138.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.+. +|++|||||+|+||++++++|+++|++|++++|+............... ..++.++.+|+++.+++.++++   
T Consensus         1 ~~~~-~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   76 (325)
T PLN02989          1 MADG-GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID---   76 (325)
T ss_pred             CCCC-CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc---
Confidence            4444 8999999999999999999999999999999998766544322221111 2368889999999999888776   


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                          ++|+|||+||.....                    .+.+.+.+.+++|+.+++++++++.+.+   ..++||++||
T Consensus        77 ----~~d~vih~A~~~~~~--------------------~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS  129 (325)
T PLN02989         77 ----GCETVFHTASPVAIT--------------------VKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSS  129 (325)
T ss_pred             ----CCCEEEEeCCCCCCC--------------------CCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecc
Confidence                589999999964211                    1345678899999999999999997653   2479999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ..++.+...... .....+...+..+.                    ........|+.||.+.+.+++.++.++ ++.+.
T Consensus       130 ~~~~~~~~~~~~-~~~~~~E~~~~~p~--------------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~  187 (325)
T PLN02989        130 MAAVLAPETKLG-PNDVVDETFFTNPS--------------------FAEERKQWYVLSKTLAEDAAWRFAKDN-EIDLI  187 (325)
T ss_pred             hhheecCCccCC-CCCccCcCCCCchh--------------------HhcccccchHHHHHHHHHHHHHHHHHc-CCeEE
Confidence            876543210000 00000000000000                    000112569999999999999888766 78888


Q ss_pred             EeecceeecCcc
Q 039097          240 CVCPGYVKTEMT  251 (290)
Q Consensus       240 ~v~PG~v~T~~~  251 (290)
                      .+.|+.+.+|..
T Consensus       188 ilR~~~vyGp~~  199 (325)
T PLN02989        188 VLNPGLVTGPIL  199 (325)
T ss_pred             EEcCCceeCCCC
Confidence            999999988764

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.84  E-value=1.7e-19  Score=162.83  Aligned_cols=225  Identities=15%  Similarity=0.140  Sum_probs=151.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ..||++|||||+|+||++++++|+++|++|+++.|+..+.+...+..... ...++.++.+|+++.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            56899999999999999999999999999999999876544332222211 12368889999999998888876      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       .+|+|||+|+.....                     ..+...+.+++|+.++.++++++...   ...++||++||..+
T Consensus        77 -~~d~vih~A~~~~~~---------------------~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~  131 (322)
T PLN02986         77 -GCDAVFHTASPVFFT---------------------VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAA  131 (322)
T ss_pred             -CCCEEEEeCCCcCCC---------------------CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhh
Confidence             589999999974211                     11223567899999999999988432   23469999999875


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ........ ......+...+..+...                    ......|+.||.+.+.+++.+..++ ++.+..+.
T Consensus       132 ~~~~~~~~-~~~~~~~E~~~~~p~~~--------------------~~~~~~Y~~sK~~aE~~~~~~~~~~-~~~~~~lr  189 (322)
T PLN02986        132 VLFRQPPI-EANDVVDETFFSDPSLC--------------------RETKNWYPLSKILAENAAWEFAKDN-GIDMVVLN  189 (322)
T ss_pred             eecCCccC-CCCCCcCcccCCChHHh--------------------hccccchHHHHHHHHHHHHHHHHHh-CCeEEEEc
Confidence            42110000 00000000000000000                    0123579999999999999988776 89999999


Q ss_pred             cceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEee
Q 039097          243 PGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       243 PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      |+.+.+|.....                       ..+.++|+|+.++..+..+.  ..|.|..
T Consensus       190 p~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dva~a~~~al~~~~--~~~~yni  251 (322)
T PLN02986        190 PGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAHIKALETPS--ANGRYII  251 (322)
T ss_pred             ccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHHHHHHHHHhcCcc--cCCcEEE
Confidence            999998853210                       12356888888877776553  3455543

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.84  E-value=1.8e-19  Score=162.76  Aligned_cols=202  Identities=14%  Similarity=0.061  Sum_probs=138.9

Q ss_pred             CCcEEEEecCCCchhHH--HHHHHHHCCCeEEEEecCcccHH------------HHHHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            5 AKRYAVVTGANKGIGYE--VVRQLALNGIITVLTARDEKGGL------------EAVEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~a--ia~~L~~~g~~Vi~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      .+|++||||+++|||.+  +|++| ++|++|+++++..+..+            ...+.++. .+..+..+.||+++.++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~-~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKA-AGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHh-cCCceEEEEcCCCCHHH
Confidence            36899999999999999  89999 99999988886432211            12223332 23457788999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCC-------------CCcccchhhh-----cccccccccChHHHHHhhhccc
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGISSD-------------ADTLSGFIEE-----GVARGKMTQTYESAEKCLQTNY  132 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~-------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~vNv  132 (290)
                      +.++++++.+.+|+||+||||+|.......             -+.+.+....     -...+....+.++++.++  ++
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KV  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hh
Confidence            999999999999999999999998643220             0111000000     000011123444554443  44


Q ss_pred             chH---HHHH--HHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCC
Q 039097          133 LGA---KRMC--EALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKG  207 (290)
Q Consensus       133 ~~~---~~l~--~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  207 (290)
                      +|.   ...+  +...+.|.  +++++|-.|........                                         
T Consensus       196 Mggedw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~-----------------------------------------  232 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLA--EGAKTVAYSYIGPELTH-----------------------------------------  232 (398)
T ss_pred             hccchHHHHHHHHHhccccc--CCcEEEEEecCCcceee-----------------------------------------
Confidence            555   2222  33334443  56899999998776543                                         


Q ss_pred             CCCCc--hhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecceeecCcccCCC
Q 039097          208 WPANA--AAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYNAG  255 (290)
Q Consensus       208 ~~~~~--~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG~v~T~~~~~~~  255 (290)
                        |.+  ..-+.+|++|+..+|.|+.++  .++|+|++.+|++.|.-.+..|
T Consensus       233 --p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        233 --PIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAIP  282 (398)
T ss_pred             --cccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcCC
Confidence              222  356899999999999999999  4899999999999999877765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.84  E-value=1.5e-19  Score=150.20  Aligned_cols=173  Identities=25%  Similarity=0.282  Sum_probs=134.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE---KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++|||||.||||..+++.|++++. +|++++|+.   ....+.+++++..+ .++.+++||++|++++.++++++.++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g-~~v~~~~~Dv~d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAG-ARVEYVQCDVTDPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT--EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCC-CceeeeccCccCHHHHHHHHHHHHhccC
Confidence            789999999999999999999986 899999993   23445677777654 5799999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      +|+.|||.||.....+...                .+.+++.+++...+.+..++.+.+.+    .+...+|..||.++.
T Consensus        81 ~i~gVih~ag~~~~~~~~~----------------~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~  140 (181)
T PF08659_consen   81 PIDGVIHAAGVLADAPIQD----------------QTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSL  140 (181)
T ss_dssp             -EEEEEE-------B-GCC------------------HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHH
T ss_pred             Ccceeeeeeeeeccccccc----------------CCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHh
Confidence            9999999999875444333                38999999999999999999999854    456799999999988


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .+.                                           ++...|+++.+.++.+++....  .+..+.+|..
T Consensus       141 ~G~-------------------------------------------~gq~~YaaAN~~lda~a~~~~~--~g~~~~sI~w  175 (181)
T PF08659_consen  141 LGG-------------------------------------------PGQSAYAAANAFLDALARQRRS--RGLPAVSINW  175 (181)
T ss_dssp             TT--------------------------------------------TTBHHHHHHHHHHHHHHHHHHH--TTSEEEEEEE
T ss_pred             ccC-------------------------------------------cchHhHHHHHHHHHHHHHHHHh--CCCCEEEEEc
Confidence            765                                           6789999999999999987655  3566778877


Q ss_pred             cee
Q 039097          244 GYV  246 (290)
Q Consensus       244 G~v  246 (290)
                      |+.
T Consensus       176 g~W  178 (181)
T PF08659_consen  176 GAW  178 (181)
T ss_dssp             -EB
T ss_pred             ccc
Confidence            754

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02583 cinnamoyl-CoA reductase

Probab=99.84  E-value=2.8e-19  Score=159.92  Aligned_cols=225  Identities=12%  Similarity=0.017  Sum_probs=152.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc--HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG--GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+|++|||||+|+||++++++|+++|++|++++|+..+  ..+....+... +.++.++.+|++|.+++.+++.      
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE-EERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC-CCceEEEEecCCCHHHHHHHHc------
Confidence            57899999999999999999999999999999996432  22222332211 2358889999999998876654      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       .+|.++|.++....                      ....+++++++|+.+++++++++.+.+   ..++||++||..+
T Consensus        78 -~~d~v~~~~~~~~~----------------------~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a  131 (297)
T PLN02583         78 -GCSGLFCCFDPPSD----------------------YPSYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTA  131 (297)
T ss_pred             -CCCEEEEeCccCCc----------------------ccccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHh
Confidence             58999987653210                      112467899999999999999997653   2479999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ......... .....+...++......                    .....|+.||...+.+++.++.+. ++.++.+.
T Consensus       132 ~~~~~~~~~-~~~~~~E~~~~~~~~~~--------------------~~~~~Y~~sK~~aE~~~~~~~~~~-gi~~v~lr  189 (297)
T PLN02583        132 VIWRDDNIS-TQKDVDERSWSDQNFCR--------------------KFKLWHALAKTLSEKTAWALAMDR-GVNMVSIN  189 (297)
T ss_pred             eecccccCC-CCCCCCcccCCCHHHHh--------------------hcccHHHHHHHHHHHHHHHHHHHh-CCcEEEEc
Confidence            532100000 00000100000000000                    011369999999999999887665 89999999


Q ss_pred             cceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          243 PGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       243 PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |+.|.+|.....                ..+..+|+|+..+..+..+.  ..|+|+...+
T Consensus       190 p~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~~~--~~~r~~~~~~  247 (297)
T PLN02583        190 AGLLMGPSLTQHNPYLKGAAQMYENGVLVTVDVNFLVDAHIRAFEDVS--SYGRYLCFNH  247 (297)
T ss_pred             CCcccCCCCCCchhhhcCCcccCcccCcceEEHHHHHHHHHHHhcCcc--cCCcEEEecC
Confidence            999988864321                13466899999888876554  5667766654

>PLN02650 dihydroflavonol-4-reductase

Probab=99.83  E-value=5.5e-19  Score=161.50  Aligned_cols=223  Identities=16%  Similarity=0.128  Sum_probs=149.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++|++|||||+|+||++++++|+++|++|++++|+............... ..++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            57899999999999999999999999999999998765544322221111 1258889999999998887776       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      .+|+|||+|+.....                     ..+.+.+.+++|+.+++++++++.+..   ..++||++||....
T Consensus        77 ~~d~ViH~A~~~~~~---------------------~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~  132 (351)
T PLN02650         77 GCTGVFHVATPMDFE---------------------SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTV  132 (351)
T ss_pred             CCCEEEEeCCCCCCC---------------------CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhc
Confidence            589999999864211                     112235778999999999999996532   14689999998544


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ......   .+.+ +...+...+...                 ..+.+...|+.||.+.+.+++.++.++ +++++.+.|
T Consensus       133 ~~~~~~---~~~~-~E~~~~~~~~~~-----------------~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilRp  190 (351)
T PLN02650        133 NVEEHQ---KPVY-DEDCWSDLDFCR-----------------RKKMTGWMYFVSKTLAEKAAWKYAAEN-GLDFISIIP  190 (351)
T ss_pred             ccCCCC---CCcc-CcccCCchhhhh-----------------ccccccchHHHHHHHHHHHHHHHHHHc-CCeEEEECC
Confidence            321000   0000 000000000000                 000123579999999999999998776 899999999


Q ss_pred             ceeecCcccC-------------------------CCCCChhhhccchhhhhhccCCCCceeEe
Q 039097          244 GYVKTEMTYN-------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFF  282 (290)
Q Consensus       244 G~v~T~~~~~-------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~  282 (290)
                      +.+.+|....                         ......+|+++.++.++..+.  ..|.|+
T Consensus       191 ~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~~~~l~~~~--~~~~~i  252 (351)
T PLN02650        191 TLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAHIFLFEHPA--AEGRYI  252 (351)
T ss_pred             CceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHHHHHhcCcC--cCceEE
Confidence            9998885321                         012467888888777765433  334553

>PLN02214 cinnamoyl-CoA reductase

Probab=99.83  E-value=5e-19  Score=161.33  Aligned_cols=220  Identities=19%  Similarity=0.142  Sum_probs=150.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH-HHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++|++|||||+|+||++++++|+++|++|++++|+.+..... ...+.. ...++.++.+|+++.+++.++++     
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEG-GKERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhC-CCCcEEEEecCcCChHHHHHHHh-----
Confidence            46788999999999999999999999999999999986543321 222321 12358889999999999888776     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+|+...                         +++.+.+++|+.++.++++++..    .+.++||++||..
T Consensus        81 --~~d~Vih~A~~~~-------------------------~~~~~~~~~nv~gt~~ll~aa~~----~~v~r~V~~SS~~  129 (342)
T PLN02214         81 --GCDGVFHTASPVT-------------------------DDPEQMVEPAVNGAKFVINAAAE----AKVKRVVITSSIG  129 (342)
T ss_pred             --cCCEEEEecCCCC-------------------------CCHHHHHHHHHHHHHHHHHHHHh----cCCCEEEEeccce
Confidence              5899999999631                         23567899999999999999853    3456999999976


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +..+......  ....+...++...                    ........|+.||.+.+.+++.++.++ ++.+..+
T Consensus       130 avyg~~~~~~--~~~~~E~~~~~~~--------------------~~~~p~~~Y~~sK~~aE~~~~~~~~~~-g~~~v~l  186 (342)
T PLN02214        130 AVYMDPNRDP--EAVVDESCWSDLD--------------------FCKNTKNWYCYGKMVAEQAAWETAKEK-GVDLVVL  186 (342)
T ss_pred             eeeccCCCCC--CcccCcccCCChh--------------------hccccccHHHHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            5543210000  0000000000000                    000123579999999999999988776 7888889


Q ss_pred             ecceeecCcccCC------------------------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          242 CPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       242 ~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      .|+.+..|.....                        ..+..+|+|+.++..+..+.  ..|.|+..
T Consensus       187 Rp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~al~~~~--~~g~yn~~  251 (342)
T PLN02214        187 NPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYEAPS--ASGRYLLA  251 (342)
T ss_pred             eCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHHHhCcc--cCCcEEEe
Confidence            9988887743210                        12357888887777665432  34565543

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=4.8e-19  Score=145.28  Aligned_cols=144  Identities=22%  Similarity=0.265  Sum_probs=116.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|+++||||++|||+++|+.|+++|++|++++|+.+..++..+++...+ .+..++.+|+++.++++++++++.+++
T Consensus        13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLG-GEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999999877777667776433 357788999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-------CCCeEE
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-------DSARIV  155 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-------~~~~iV  155 (290)
                      +++|++|||||.....+...               +.+.++ ++  .+|+.+.+..++.+.++|+++       +.|++.
T Consensus        92 G~iDilVnnAG~~~~~~~~~---------------~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (169)
T PRK06720         92 SRIDMLFQNAGLYKIDSIFS---------------RQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFG  153 (169)
T ss_pred             CCCCEEEECCCcCCCCCccc---------------ccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceee
Confidence            99999999999865433221               113333 33  778888888999888887654       358999


Q ss_pred             EEcCCCCccc
Q 039097          156 NVSSSLGKLM  165 (290)
Q Consensus       156 ~isS~~g~~~  165 (290)
                      .|||....+.
T Consensus       154 ~~~~~~~~~~  163 (169)
T PRK06720        154 IIGTKGQSFH  163 (169)
T ss_pred             Eeccccccce
Confidence            9999876654

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.81  E-value=1.5e-18  Score=157.72  Aligned_cols=195  Identities=15%  Similarity=0.173  Sum_probs=131.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHH--HHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV--EKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~--~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++++|||||+|+||++++++|+++|++|++++|+........  ..+..  ..++.++.+|++|.+++.++++    
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE--LGDLKIFGADLTDEESFEAPIA----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC--CCceEEEEcCCCChHHHHHHHh----
Confidence            466899999999999999999999999999998888865433221  11211  1258889999999998887765    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                         ++|+|||+|+.....                     ..+.+...+++|+.++.++++++.+.   .+.++||++||.
T Consensus        80 ---~~d~vih~A~~~~~~---------------------~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~  132 (338)
T PLN00198         80 ---GCDLVFHVATPVNFA---------------------SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSA  132 (338)
T ss_pred             ---cCCEEEEeCCCCccC---------------------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecc
Confidence               589999999953110                     11234567899999999999998542   134799999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+......  ......+...++.....                 ...+++...|+.||.+.+.+++.++.++ ++.+..
T Consensus       133 ~~~g~~~~~--~~~~~~~E~~~~~~~~~-----------------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~  192 (338)
T PLN00198        133 AAVSINKLS--GTGLVMNEKNWTDVEFL-----------------TSEKPPTWGYPASKTLAEKAAWKFAEEN-NIDLIT  192 (338)
T ss_pred             eeeeccCCC--CCCceeccccCCchhhh-----------------hhcCCccchhHHHHHHHHHHHHHHHHhc-CceEEE
Confidence            655321000  00000000000000000                 0001234679999999999999988776 788888


Q ss_pred             eecceeecCc
Q 039097          241 VCPGYVKTEM  250 (290)
Q Consensus       241 v~PG~v~T~~  250 (290)
                      +.|+.+.+|-
T Consensus       193 ~R~~~vyGp~  202 (338)
T PLN00198        193 VIPTLMAGPS  202 (338)
T ss_pred             EeCCceECCC
Confidence            8888887774

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.80  E-value=1.6e-18  Score=157.78  Aligned_cols=212  Identities=17%  Similarity=0.094  Sum_probs=144.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHh---cCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKH---SGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +.++|++|||||+|+||++++++|+++|++|++++|++.... ...+.+..   ..+..+.++.+|++|.+++.++++.+
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            678899999999999999999999999999999998754321 11222211   11235889999999999999988864


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEE
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~i  157 (290)
                           ++|+|||+|+......                    ..+.....+++|+.++.++++++.+...+.. ..++|++
T Consensus        83 -----~~d~Vih~A~~~~~~~--------------------~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~  137 (340)
T PLN02653         83 -----KPDEVYNLAAQSHVAV--------------------SFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQA  137 (340)
T ss_pred             -----CCCEEEECCcccchhh--------------------hhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEe
Confidence                 5999999999753211                    2344567789999999999999988765331 1378899


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC---
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP---  234 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~---  234 (290)
                      ||...+... .                               .+..+.. ...+...|+.||.+.+.+++.++.++.   
T Consensus       138 Ss~~vyg~~-~-------------------------------~~~~E~~-~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~  184 (340)
T PLN02653        138 GSSEMYGST-P-------------------------------PPQSETT-PFHPRSPYAVAKVAAHWYTVNYREAYGLFA  184 (340)
T ss_pred             ccHHHhCCC-C-------------------------------CCCCCCC-CCCCCChhHHHHHHHHHHHHHHHHHcCCeE
Confidence            886432211 0                               0000000 012356899999999999999988762   


Q ss_pred             --CeEEEEeecceeecCcc-----------cC-------------CCCCChhhhccchhhhhhc
Q 039097          235 --NFCINCVCPGYVKTEMT-----------YN-------------AGRLTVEEGAESPVWLALL  272 (290)
Q Consensus       235 --~i~vn~v~PG~v~T~~~-----------~~-------------~~~~~~e~~a~~~~~l~~~  272 (290)
                        .+.+|.+.||...+.+.           ..             ......+|+++.++.++..
T Consensus       185 ~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~  248 (340)
T PLN02653        185 CNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQ  248 (340)
T ss_pred             EEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhc
Confidence              34446667754322110           00             0124778888888877654

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.80  E-value=2.4e-18  Score=155.11  Aligned_cols=222  Identities=16%  Similarity=0.128  Sum_probs=146.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-C-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-G-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++|++|||||+|+||++++++|+++|++|++++|+....... ..+... . ..++.++.+|+++.+++.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKT-EHLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhH-HHHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            578999999999999999999999999999999986553322 222211 1 2368899999999988877776      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+|||+|+.....                     ..+...+.+++|+.++.++++++....   +.++||++||..+
T Consensus        76 -~~d~Vih~A~~~~~~---------------------~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~  130 (322)
T PLN02662         76 -GCEGVFHTASPFYHD---------------------VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAA  130 (322)
T ss_pred             -CCCEEEEeCCcccCC---------------------CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHH
Confidence             589999999965211                     111124788999999999999985321   3469999999764


Q ss_pred             c-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          163 K-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       163 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      . .+...        ..+...-.++ .+.         .+.    ........|+.+|.+.+.+++.+..+. ++++..+
T Consensus       131 ~~y~~~~--------~~~~~~~~E~-~~~---------~p~----~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~l  187 (322)
T PLN02662        131 VAYNGKP--------LTPDVVVDET-WFS---------DPA----FCEESKLWYVLSKTLAEEAAWKFAKEN-GIDMVTI  187 (322)
T ss_pred             hcCCCcC--------CCCCCcCCcc-cCC---------Chh----HhhcccchHHHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            2 11100        0000000000 000         000    000112479999999999998887665 8999999


Q ss_pred             ecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEee
Q 039097          242 CPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       242 ~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      .|+.+.+|.....                       ..+.++|+++.++..+..+.  ..|.|..
T Consensus       188 Rp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~  250 (322)
T PLN02662        188 NPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVANAHIQAFEIPS--ASGRYCL  250 (322)
T ss_pred             eCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHHHHHHHHhcCcC--cCCcEEE
Confidence            9999988753210                       12466888888877766543  2355543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.80  E-value=2.5e-18  Score=161.64  Aligned_cols=201  Identities=14%  Similarity=0.097  Sum_probs=132.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc---cH-------------HHHHHHHHhcCCCcEEEEEeeCC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK---GG-------------LEAVEKLKHSGFDNVIFHQLDVA   66 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~---~~-------------~~~~~~l~~~~~~~~~~~~~Dl~   66 (290)
                      .+++|++|||||+|+||++++++|+++|++|++++|...   +.             .+..+.+......++.++.+|++
T Consensus        44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~  123 (442)
T PLN02572         44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC  123 (442)
T ss_pred             cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence            467899999999999999999999999999999875321   10             11111221112235889999999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh
Q 039097           67 DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL  146 (290)
Q Consensus        67 ~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l  146 (290)
                      |.+++.+++++.     ++|+|||+|+...... .                ..++++++..+++|+.+++++++++..  
T Consensus       124 d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~-~----------------~~~~~~~~~~~~~Nv~gt~nlleaa~~--  179 (442)
T PLN02572        124 DFEFLSEAFKSF-----EPDAVVHFGEQRSAPY-S----------------MIDRSRAVFTQHNNVIGTLNVLFAIKE--  179 (442)
T ss_pred             CHHHHHHHHHhC-----CCCEEEECCCcccChh-h----------------hcChhhHHHHHHHHHHHHHHHHHHHHH--
Confidence            999999988863     6999999997643111 0                114566778899999999999999844  


Q ss_pred             ccCCC-CeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCC-CCCCCCchhhhhhHHHHHH
Q 039097          147 QLSDS-ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPET-KGWPANAAAYILSKAAMNA  224 (290)
Q Consensus       147 ~~~~~-~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~sKaa~~~  224 (290)
                        .+. .++|++||...+.....     +.  +      +.       +.+......+.. .....+...|+.||.+.+.
T Consensus       180 --~gv~~~~V~~SS~~vYG~~~~-----~~--~------E~-------~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~  237 (442)
T PLN02572        180 --FAPDCHLVKLGTMGEYGTPNI-----DI--E------EG-------YITITHNGRTDTLPYPKQASSFYHLSKVHDSH  237 (442)
T ss_pred             --hCCCccEEEEecceecCCCCC-----CC--c------cc-------ccccccccccccccCCCCCCCcchhHHHHHHH
Confidence              233 48999999864321100     00  0      00       000000000000 0001234579999999999


Q ss_pred             HHHHHHhhCCCeEEEEeecceeecCc
Q 039097          225 YTRILAKKYPNFCINCVCPGYVKTEM  250 (290)
Q Consensus       225 ~~~~la~e~~~i~vn~v~PG~v~T~~  250 (290)
                      +++.++..+ ++.+..+.|+.+..|.
T Consensus       238 l~~~~~~~~-gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        238 NIAFTCKAW-GIRATDLNQGVVYGVR  262 (442)
T ss_pred             HHHHHHHhc-CCCEEEEecccccCCC
Confidence            999887765 7888888887777664

>PLN02240 UDP-glucose 4-epimerase

Probab=99.80  E-value=5e-18  Score=154.95  Aligned_cols=180  Identities=21%  Similarity=0.239  Sum_probs=126.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHh---cCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH---SGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++|++|+++||||+|+||++++++|+++|++|++++|.........+.+..   ....++.++.+|+++.+++.+++++.
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~   80 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST   80 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence            357789999999999999999999999999999998765433332222222   11235788999999999998887752


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                           ++|+|||+|+......                    +.+.+.+.+++|+.+++++++++    ++.+.+++|++|
T Consensus        81 -----~~d~vih~a~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~S  131 (352)
T PLN02240         81 -----RFDAVIHFAGLKAVGE--------------------SVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSS  131 (352)
T ss_pred             -----CCCEEEEccccCCccc--------------------cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEc
Confidence                 7999999999753211                    33556789999999999999877    444457999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEE
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI  238 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~v  238 (290)
                      |...+ +....   ..+                           .+... ..+...|+.+|.+.+.+++.++.+..++.+
T Consensus       132 s~~vy-g~~~~---~~~---------------------------~E~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~  179 (352)
T PLN02240        132 SATVY-GQPEE---VPC---------------------------TEEFP-LSATNPYGRTKLFIEEICRDIHASDPEWKI  179 (352)
T ss_pred             cHHHh-CCCCC---CCC---------------------------CCCCC-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence            96432 21000   000                           00000 023468999999999999998866445555


Q ss_pred             EEee
Q 039097          239 NCVC  242 (290)
Q Consensus       239 n~v~  242 (290)
                      ..+.
T Consensus       180 ~~~R  183 (352)
T PLN02240        180 ILLR  183 (352)
T ss_pred             EEEe
Confidence            4444

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.79  E-value=7.7e-18  Score=154.07  Aligned_cols=202  Identities=19%  Similarity=0.145  Sum_probs=134.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.+++++|||||+|+||++++++|+++|++|++++|+..+.......+..  ..++.++.+|+++.+++.++++      
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~------   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE--GDRLRLFRADLQEEGSFDEAVK------   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc--CCeEEEEECCCCCHHHHHHHHc------
Confidence            35678999999999999999999999999999999987655544443322  2468899999999998877765      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHH--HHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA--EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                       ++|+|||+|+.........               ..+++.+  ..++++|+.++.++++++.+..   ..++||++||.
T Consensus        79 -~~d~Vih~A~~~~~~~~~~---------------~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~  139 (353)
T PLN02896         79 -GCDGVFHVAASMEFDVSSD---------------HNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSI  139 (353)
T ss_pred             -CCCEEEECCccccCCcccc---------------ccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEech
Confidence             5899999999764321000               0022332  4567788899999999985431   24699999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+.........    ..+  .++....+.     ....       ..+++...|+.||.+.+.+++.++.++ ++.+..
T Consensus       140 ~vyg~~~~~~~~----~~~--~~E~~~~p~-----~~~~-------~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~  200 (353)
T PLN02896        140 STLTAKDSNGRW----RAV--VDETCQTPI-----DHVW-------NTKASGWVYVLSKLLTEEAAFKYAKEN-GIDLVS  200 (353)
T ss_pred             hhccccccCCCC----CCc--cCcccCCcH-----HHhh-------ccCCCCccHHHHHHHHHHHHHHHHHHc-CCeEEE
Confidence            655321000000    000  000000000     0000       000223579999999999999988776 788888


Q ss_pred             eecceeecCc
Q 039097          241 VCPGYVKTEM  250 (290)
Q Consensus       241 v~PG~v~T~~  250 (290)
                      +.|+.+..|.
T Consensus       201 lR~~~vyGp~  210 (353)
T PLN02896        201 VITTTVAGPF  210 (353)
T ss_pred             EcCCcccCCC
Confidence            8887777764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.78  E-value=6.9e-18  Score=154.32  Aligned_cols=208  Identities=18%  Similarity=0.144  Sum_probs=136.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEE-EEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITV-LTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi-~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      |++|||||+|+||++++++|+++|+.|+ +.+|.... .. ...+... ...++.++.+|++|.+++++++++     .+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLAPVAQSERFAFEKVDICDRAELARVFTE-----HQ   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhhhcccCCceEEEECCCcChHHHHHHHhh-----cC
Confidence            5799999999999999999999998755 44554321 11 1111111 123577889999999999888875     26


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc---c--CCCCeEEEEcC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ---L--SDSARIVNVSS  159 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~---~--~~~~~iV~isS  159 (290)
                      +|+|||+||.....                    .+.+.+.+.+++|+.+++++++++.+.+.   +  ....++|++||
T Consensus        75 ~D~Vih~A~~~~~~--------------------~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS  134 (355)
T PRK10217         75 PDCVMHLAAESHVD--------------------RSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHIST  134 (355)
T ss_pred             CCEEEECCcccCcc--------------------hhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecc
Confidence            99999999975321                    14466789999999999999999976532   1  12358999998


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ...+.....                             ...+..+... ..+...|+.||.+.+.+++.++.++ ++++.
T Consensus       135 ~~vyg~~~~-----------------------------~~~~~~E~~~-~~p~s~Y~~sK~~~e~~~~~~~~~~-~~~~~  183 (355)
T PRK10217        135 DEVYGDLHS-----------------------------TDDFFTETTP-YAPSSPYSASKASSDHLVRAWLRTY-GLPTL  183 (355)
T ss_pred             hhhcCCCCC-----------------------------CCCCcCCCCC-CCCCChhHHHHHHHHHHHHHHHHHh-CCCeE
Confidence            753321000                             0000000001 1235789999999999999998776 45555


Q ss_pred             EeecceeecCcccC--------------------------CCCCChhhhccchhhhhhc
Q 039097          240 CVCPGYVKTEMTYN--------------------------AGRLTVEEGAESPVWLALL  272 (290)
Q Consensus       240 ~v~PG~v~T~~~~~--------------------------~~~~~~e~~a~~~~~l~~~  272 (290)
                      .+.|+.+..|....                          ...+..+|+++.++.++..
T Consensus       184 i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~  242 (355)
T PRK10217        184 ITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATT  242 (355)
T ss_pred             EEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhc
Confidence            55555444433210                          1135778888887766653

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.78  E-value=1e-17  Score=152.63  Aligned_cols=180  Identities=19%  Similarity=0.129  Sum_probs=122.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH-HHHHHHHHh----cCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-LEAVEKLKH----SGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~-~~~~~~l~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++|||||+|+||++++++|+++|++|++++|+.... .+....+..    .....+.++.+|++|.+++.++++.+   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999986431 111222211    11235889999999999999988864   


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+|+......                    ..+.....+++|+.++.++++++.+.-.+ ...++|++||..
T Consensus        78 --~~d~ViH~Aa~~~~~~--------------------~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~  134 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVKV--------------------SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSE  134 (343)
T ss_pred             --CCCEEEECCcccccch--------------------hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHH
Confidence              5899999999754211                    22233567789999999999999653111 124899999975


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC-----Ce
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP-----NF  236 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-----~i  236 (290)
                      .+.....                               .+..+. ....+...|+.||.+.+.+++.++.++.     .+
T Consensus       135 vyg~~~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~  182 (343)
T TIGR01472       135 LYGKVQE-------------------------------IPQNET-TPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGI  182 (343)
T ss_pred             hhCCCCC-------------------------------CCCCCC-CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEe
Confidence            4321100                               000000 0012356899999999999999987752     22


Q ss_pred             EEEEeecc
Q 039097          237 CINCVCPG  244 (290)
Q Consensus       237 ~vn~v~PG  244 (290)
                      .+|.+.|+
T Consensus       183 ~~~~~gp~  190 (343)
T TIGR01472       183 LFNHESPR  190 (343)
T ss_pred             ecccCCCC
Confidence            33556665

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.77  E-value=7.3e-18  Score=145.68  Aligned_cols=165  Identities=24%  Similarity=0.221  Sum_probs=129.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +++|||||.|.||++++.+|++.|+.|++.|.......+.+..++      ..+++.|+.|.+.+++++++     .+||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~------~~f~~gDi~D~~~L~~vf~~-----~~id   69 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ------FKFYEGDLLDRALLTAVFEE-----NKID   69 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc------CceEEeccccHHHHHHHHHh-----cCCC
Confidence            479999999999999999999999999999998777666665432      68899999999999999987     3899


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      .|||.||.....                    .|.+...++++.|+.|++.|++++    ++.+-.+|||.||.+.+.. 
T Consensus        70 aViHFAa~~~Vg--------------------ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSStAavYG~-  124 (329)
T COG1087          70 AVVHFAASISVG--------------------ESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSSTAAVYGE-  124 (329)
T ss_pred             EEEECccccccc--------------------hhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecchhhcCC-
Confidence            999999976432                    277888999999999999999998    5556678999888754332 


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC-CCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP-ANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                                  |...+..                    +..| .+..+|+.||.+.|.+.+.++...+ .++..
T Consensus       125 ------------p~~~PI~--------------------E~~~~~p~NPYG~sKlm~E~iL~d~~~a~~-~~~v~  166 (329)
T COG1087         125 ------------PTTSPIS--------------------ETSPLAPINPYGRSKLMSEEILRDAAKANP-FKVVI  166 (329)
T ss_pred             ------------CCCcccC--------------------CCCCCCCCCcchhHHHHHHHHHHHHHHhCC-CcEEE
Confidence                        2111111                    1111 2456899999999999999998874 55433

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.77  E-value=2.3e-17  Score=150.68  Aligned_cols=183  Identities=14%  Similarity=0.116  Sum_probs=130.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHh----cCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH----SGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      +++|++|||||+|.||++++++|+++|++|++++|..............    ....++.++.+|+++.+++.++++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            5678999999999999999999999999999999875443332222211    111357889999999888777765   


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                          .+|+|||.|+......                    +.++....+++|+.++.++++.+    ++.+..++|++||
T Consensus        90 ----~~d~ViHlAa~~~~~~--------------------~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS  141 (348)
T PRK15181         90 ----NVDYVLHQAALGSVPR--------------------SLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAAS  141 (348)
T ss_pred             ----CCCEEEECccccCchh--------------------hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeec
Confidence                5899999999753211                    22344567999999999999998    4445579999998


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ...+.....      ..                        ..+  +....+...|+.+|.+.+.+++.++.++ ++++.
T Consensus       142 ~~vyg~~~~------~~------------------------~~e--~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~  188 (348)
T PRK15181        142 SSTYGDHPD------LP------------------------KIE--ERIGRPLSPYAVTKYVNELYADVFARSY-EFNAI  188 (348)
T ss_pred             hHhhCCCCC------CC------------------------CCC--CCCCCCCChhhHHHHHHHHHHHHHHHHh-CCCEE
Confidence            754321100      00                        000  0011234579999999999998887665 78888


Q ss_pred             EeecceeecCc
Q 039097          240 CVCPGYVKTEM  250 (290)
Q Consensus       240 ~v~PG~v~T~~  250 (290)
                      .+.|+.+..|.
T Consensus       189 ~lR~~~vyGp~  199 (348)
T PRK15181        189 GLRYFNVFGRR  199 (348)
T ss_pred             EEEecceeCcC
Confidence            88888777764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.77  E-value=3.1e-17  Score=148.93  Aligned_cols=177  Identities=18%  Similarity=0.153  Sum_probs=123.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+++|++|++++|...........+....+.++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            6999999999999999999999999999887644333333333332334577889999999998888764     37999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+||......                    ..+...+.+++|+.++.++++++    ++.+.+++|++||...+... 
T Consensus        77 vvh~a~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~-  131 (338)
T PRK10675         77 VIHFAGLKAVGE--------------------SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQ-  131 (338)
T ss_pred             EEECCccccccc--------------------hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCC-
Confidence            999999753211                    22334568899999999999877    44455799999997533211 


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      ..     .                         +..+......+...|+.+|.+.+.+++.++.+..++++..+.++
T Consensus       132 ~~-----~-------------------------~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~  178 (338)
T PRK10675        132 PK-----I-------------------------PYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYF  178 (338)
T ss_pred             CC-----C-------------------------ccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence            00     0                         00000000012468999999999999999877666666555543

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.76  E-value=3.4e-17  Score=152.38  Aligned_cols=172  Identities=20%  Similarity=0.144  Sum_probs=144.2

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ..++||++|||||+|.||+++++++++.+. ++++.+|++.+.-....++....+ .++.++-+|++|.+.+.++++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            357899999999999999999999999987 688999999998888888877644 47899999999999999999963 


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                          ++|+|+|.|+.-+. |.                   -.....+.+.+|++|+.++++++    .+.+-.++|.+|+
T Consensus       325 ----kvd~VfHAAA~KHV-Pl-------------------~E~nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iST  376 (588)
T COG1086         325 ----KVDIVFHAAALKHV-PL-------------------VEYNPEEAIKTNVLGTENVAEAA----IKNGVKKFVLIST  376 (588)
T ss_pred             ----CCceEEEhhhhccC-cc-------------------hhcCHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEec
Confidence                79999999997542 32                   34567889999999999999999    5556789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC--CeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--~i~  237 (290)
                      --+..|.                                              ..||++|...+.++.+++.+..  +-+
T Consensus       377 DKAV~Pt----------------------------------------------NvmGaTKr~aE~~~~a~~~~~~~~~T~  410 (588)
T COG1086         377 DKAVNPT----------------------------------------------NVMGATKRLAEKLFQAANRNVSGTGTR  410 (588)
T ss_pred             CcccCCc----------------------------------------------hHhhHHHHHHHHHHHHHhhccCCCCcE
Confidence            8776544                                              6899999999999999988764  466


Q ss_pred             EEEeecceeec
Q 039097          238 INCVCPGYVKT  248 (290)
Q Consensus       238 vn~v~PG~v~T  248 (290)
                      +.+|.=|.|..
T Consensus       411 f~~VRFGNVlG  421 (588)
T COG1086         411 FCVVRFGNVLG  421 (588)
T ss_pred             EEEEEecceec
Confidence            66666665544

>PLN02686 cinnamoyl-CoA reductase

Probab=99.75  E-value=4.1e-17  Score=150.08  Aligned_cols=216  Identities=16%  Similarity=0.156  Sum_probs=142.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-----CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-----FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      ++++|++|||||+|+||++++++|+++|++|+++.|+....+.. +++...+     ...+.++.+|++|.+++.++++ 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            57789999999999999999999999999999988886554432 2332111     1247889999999999988887 


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                            .+|.+||.|+........                    .......++|+.+..++++++...   .+..++|++
T Consensus       128 ------~~d~V~hlA~~~~~~~~~--------------------~~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~  178 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAGLS--------------------GYTKSMAELEAKASENVIEACVRT---ESVRKCVFT  178 (367)
T ss_pred             ------hccEEEecCeeecccccc--------------------cccchhhhhhHHHHHHHHHHHHhc---CCccEEEEe
Confidence                  469999999876322110                    011245678999999999998421   135699999


Q ss_pred             cCCCCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCe
Q 039097          158 SSSLGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF  236 (290)
Q Consensus       158 sS~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i  236 (290)
                      ||..+. .+....... +...+...+..+.                    ..+.+...|+.||.+.+.+++.++.+. ++
T Consensus       179 SS~~~~vyg~~~~~~~-~~~i~E~~~~~~~--------------------~~~~p~~~Y~~sK~~~E~~~~~~~~~~-gl  236 (367)
T PLN02686        179 SSLLACVWRQNYPHDL-PPVIDEESWSDES--------------------FCRDNKLWYALGKLKAEKAAWRAARGK-GL  236 (367)
T ss_pred             ccHHHhcccccCCCCC-CcccCCCCCCChh--------------------hcccccchHHHHHHHHHHHHHHHHHhc-Cc
Confidence            997421 111000000 0000000000000                    001233579999999999999888775 89


Q ss_pred             EEEEeecceeecCcccCC---------------------CCCChhhhccchhhhhh
Q 039097          237 CINCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLAL  271 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~  271 (290)
                      +++.+.|+.+.+|.....                     .....+|+++.++..+.
T Consensus       237 ~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        237 KLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             eEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            999999999999853210                     12466777877776665

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.75  E-value=5.6e-17  Score=143.68  Aligned_cols=215  Identities=19%  Similarity=0.124  Sum_probs=147.0

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097           10 VVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus        10 lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      |||||+|.||++++++|+++|  +.|.++++.+.....  ..+...  ....++.+|++|.+++.++++       .+|+
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~--~~~~~~~~Di~d~~~l~~a~~-------g~d~   69 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS--GVKEYIQGDITDPESLEEALE-------GVDV   69 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc--cceeEEEeccccHHHHHHHhc-------CCce
Confidence            699999999999999999999  789999987654321  111111  123489999999999999988       6899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||.|+.....                     .....++++++|+.|+-++++++.    +.+-.++|++||........
T Consensus        70 V~H~Aa~~~~~---------------------~~~~~~~~~~vNV~GT~nvl~aa~----~~~VkrlVytSS~~vv~~~~  124 (280)
T PF01073_consen   70 VFHTAAPVPPW---------------------GDYPPEEYYKVNVDGTRNVLEAAR----KAGVKRLVYTSSISVVFDNY  124 (280)
T ss_pred             EEEeCcccccc---------------------CcccHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEcCcceeEecc
Confidence            99999986432                     124467899999999999999994    45678999999998765411


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHh---hC-CCeEEEEeec
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KY-PNFCINCVCP  243 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~---e~-~~i~vn~v~P  243 (290)
                      ..   ..                       ..+..+...-.+.....|+.||+..|.++.....   +. +.++..+|.|
T Consensus       125 ~~---~~-----------------------~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP  178 (280)
T PF01073_consen  125 KG---DP-----------------------IINGDEDTPYPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRP  178 (280)
T ss_pred             CC---CC-----------------------cccCCcCCcccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEec
Confidence            00   00                       0000000000011346899999999999987665   11 3578889999


Q ss_pred             ceeecCcccCC------------------------CCCChhhhccchhhhhh---cc--CCCCceeEeecCc
Q 039097          244 GYVKTEMTYNA------------------------GRLTVEEGAESPVWLAL---LH--KGGPSGLFFSRKE  286 (290)
Q Consensus       244 G~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~---~~--~~~~~g~~~~~~~  286 (290)
                      ..|..|.....                        .....+++|+..+....   .+  .....|+.|-.++
T Consensus       179 ~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd  250 (280)
T PF01073_consen  179 AGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGKPERVAGQAYFITD  250 (280)
T ss_pred             cEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccccccCCCcEEEEEC
Confidence            99999864332                        12357888887665433   22  2345666654443

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.74  E-value=1.4e-16  Score=143.27  Aligned_cols=179  Identities=21%  Similarity=0.164  Sum_probs=125.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+++|++|++.+|......+....+...  ..+.++.+|+++.+++.++++.     +++|+
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   73 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERI--TRVTFVEGDLRDRELLDRLFEE-----HKIDA   73 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccc--cceEEEECCCCCHHHHHHHHHh-----CCCcE
Confidence            4799999999999999999999999998876543322222222211  1477889999999999988874     47999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      +||+||......                    +.+...+.+.+|+.++..+++++.    +.+.+++|++||........
T Consensus        74 vv~~ag~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~ss~~~~g~~~  129 (328)
T TIGR01179        74 VIHFAGLIAVGE--------------------SVQDPLKYYRNNVVNTLNLLEAMQ----QTGVKKFIFSSSAAVYGEPS  129 (328)
T ss_pred             EEECccccCcch--------------------hhcCchhhhhhhHHHHHHHHHHHH----hcCCCEEEEecchhhcCCCC
Confidence            999999753211                    233455778999999999999873    33457999999864322110


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+..+. ....+...|+.+|++.+.+++.++.+..++++..+.|+.+.
T Consensus       130 ~-------------------------------~~~~e~-~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~  177 (328)
T TIGR01179       130 S-------------------------------IPISED-SPLGPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVA  177 (328)
T ss_pred             C-------------------------------CCcccc-CCCCCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCccc
Confidence            0                               000000 00123468999999999999999877568888888886665


Q ss_pred             cC
Q 039097          248 TE  249 (290)
Q Consensus       248 T~  249 (290)
                      .+
T Consensus       178 g~  179 (328)
T TIGR01179       178 GA  179 (328)
T ss_pred             CC
Confidence            54

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.73  E-value=2e-16  Score=137.93  Aligned_cols=193  Identities=19%  Similarity=0.209  Sum_probs=127.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~   81 (290)
                      +.++++++||||+|+||++++++|+++|++|+++.|+.++.....   . . ...+.++.+|+++. +++.+.+.     
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~-~-~~~~~~~~~Dl~d~~~~l~~~~~-----   83 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSL---P-Q-DPSLQIVRADVTEGSDKLVEAIG-----   83 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhc---c-c-CCceEEEEeeCCCCHHHHHHHhh-----
Confidence            456789999999999999999999999999999999976543221   1 1 23588899999984 33322221     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       .++|+||+++|......                    .    ...+++|+.++.++++++    ++.+.++||++||..
T Consensus        84 -~~~d~vi~~~g~~~~~~--------------------~----~~~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~  134 (251)
T PLN00141         84 -DDSDAVICATGFRRSFD--------------------P----FAPWKVDNFGTVNLVEAC----RKAGVTRFILVSSIL  134 (251)
T ss_pred             -cCCCEEEECCCCCcCCC--------------------C----CCceeeehHHHHHHHHHH----HHcCCCEEEEEcccc
Confidence             26999999998642110                    0    123578889999999987    444568999999986


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHH-HHHHHhhC---CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAY-TRILAKKY---PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~-~~~la~e~---~~i~  237 (290)
                      ......                                       +. +....|...|.+...+ .+..+.++   .+++
T Consensus       135 v~g~~~---------------------------------------~~-~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~  174 (251)
T PLN00141        135 VNGAAM---------------------------------------GQ-ILNPAYIFLNLFGLTLVAKLQAEKYIRKSGIN  174 (251)
T ss_pred             ccCCCc---------------------------------------cc-ccCcchhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence            432110                                       00 0112344444332222 22222211   4899


Q ss_pred             EEEeecceeecCcccC-----------CCCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYN-----------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~-----------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++.|.||++.++....           .+..+++++|+.++.++..+.
T Consensus       175 ~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~  222 (251)
T PLN00141        175 YTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEALLCPE  222 (251)
T ss_pred             EEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHhcChh
Confidence            9999999998765321           134799999999999987666

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.72  E-value=3.6e-16  Score=140.04  Aligned_cols=181  Identities=18%  Similarity=0.143  Sum_probs=126.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +++||||+|+||.+++++|+++|  ++|++.+|.... ..+..+.+..  ..++.++.+|+++.+++.++++..     +
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~-----~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED--NPRYRFVKGDIGDRELVSRLFTEH-----Q   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc--CCCcEEEEcCCcCHHHHHHHHhhc-----C
Confidence            48999999999999999999987  689888774321 1122222221  135788899999999999888753     6


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+|+......                    +.+.+++.+++|+.++.++++.+...+.   ..++|++||.....
T Consensus        74 ~d~vi~~a~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g  130 (317)
T TIGR01181        74 PDAVVHFAAESHVDR--------------------SISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYG  130 (317)
T ss_pred             CCEEEEcccccCchh--------------------hhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeC
Confidence            999999999753211                    3456678899999999999998865432   24899999965332


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      .....                              .+..+... ..+...|+.+|.+.+.+++.++.+. ++++..+.|+
T Consensus       131 ~~~~~------------------------------~~~~e~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~R~~  178 (317)
T TIGR01181       131 DLEKG------------------------------DAFTETTP-LAPSSPYSASKAASDHLVRAYHRTY-GLPALITRCS  178 (317)
T ss_pred             CCCCC------------------------------CCcCCCCC-CCCCCchHHHHHHHHHHHHHHHHHh-CCCeEEEEec
Confidence            21000                              00000001 1234689999999999999988776 7777888888


Q ss_pred             eeecCc
Q 039097          245 YVKTEM  250 (290)
Q Consensus       245 ~v~T~~  250 (290)
                      .+..+.
T Consensus       179 ~i~G~~  184 (317)
T TIGR01181       179 NNYGPY  184 (317)
T ss_pred             cccCCC
Confidence            776653

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.71  E-value=4.2e-16  Score=142.40  Aligned_cols=191  Identities=19%  Similarity=0.175  Sum_probs=120.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGII-TVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++|||||+|+||++++++|+++|++ |+..++... ...+....+.  ...++.++.+|++|.+++.+++++     .++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVS--DSERYVFEHADICDRAELDRIFAQ-----HQP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcc--cCCceEEEEecCCCHHHHHHHHHh-----cCC
Confidence            6999999999999999999999986 554555321 1111111221  123578899999999999998875     279


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-----CCCeEEEEcCC
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-----DSARIVNVSSS  160 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-----~~~~iV~isS~  160 (290)
                      |+|||+||......                    +.+..++.+++|+.+++++++.+.+.|+..     ...++|++||.
T Consensus        75 d~vih~A~~~~~~~--------------------~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~  134 (352)
T PRK10084         75 DAVMHLAAESHVDR--------------------SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTD  134 (352)
T ss_pred             CEEEECCcccCCcc--------------------hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecch
Confidence            99999999753211                    223346789999999999999998765421     23589999987


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+... ... .+ ..       .+           ....+..+... ..+...|+.||.+.+.+++.++.++ ++.+..
T Consensus       135 ~vyg~~-~~~-~~-~~-------~~-----------~~~~~~~E~~~-~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~vi  191 (352)
T PRK10084        135 EVYGDL-PHP-DE-VE-------NS-----------EELPLFTETTA-YAPSSPYSASKASSDHLVRAWLRTY-GLPTIV  191 (352)
T ss_pred             hhcCCC-Ccc-cc-cc-------cc-----------ccCCCccccCC-CCCCChhHHHHHHHHHHHHHHHHHh-CCCEEE
Confidence            543211 000 00 00       00           00000000001 1234689999999999999998776 344433


Q ss_pred             eecceeec
Q 039097          241 VCPGYVKT  248 (290)
Q Consensus       241 v~PG~v~T  248 (290)
                      +.|+.+..
T Consensus       192 lr~~~v~G  199 (352)
T PRK10084        192 TNCSNNYG  199 (352)
T ss_pred             EeccceeC
Confidence            44444433

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.71  E-value=1.9e-16  Score=138.25  Aligned_cols=169  Identities=20%  Similarity=0.238  Sum_probs=129.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++||||||+|.||.+++.+|+++|+.|+++|.-.....+..+.+++...  +.+.++.+|++|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            68999999999999999999999999999998765555555555544433  67999999999999999999975     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|.|+|-|+......                    +.+...+.+..|+.|++++++.+    ++.+...+||.||...+
T Consensus        77 ~fd~V~Hfa~~~~vge--------------------S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvY  132 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVGE--------------------SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVY  132 (343)
T ss_pred             CCceEEeehhhhccch--------------------hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeee
Confidence            7999999999864332                    55666889999999999999998    54557899999987644


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP  234 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~  234 (290)
                      ...             +.++              +.+..+. +   .+...|+.+|-+++..++.+...++
T Consensus       133 G~p-------------~~ip--------------~te~~~t-~---~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  133 GLP-------------TKVP--------------ITEEDPT-D---QPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             cCc-------------ceee--------------ccCcCCC-C---CCCCcchhhhHHHHHHHHhhhcccc
Confidence            321             1100              0000100 0   1357899999999999999988875

>PLN02427 UDP-apiose/xylose synthase

Probab=99.69  E-value=7.7e-16  Score=142.56  Aligned_cols=203  Identities=12%  Similarity=0.053  Sum_probs=123.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.++||||||+|.||+.++++|+++ |++|++++|+..+..............++.++.+|++|.+.+.++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            34458999999999999999999998 58999999876543322111000111358899999999998887776      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       .+|+|||+|+...+..                    ..++-.+.+..|+.+..++++++.    +.. .++|++||...
T Consensus        86 -~~d~ViHlAa~~~~~~--------------------~~~~~~~~~~~n~~gt~~ll~aa~----~~~-~r~v~~SS~~v  139 (386)
T PLN02427         86 -MADLTINLAAICTPAD--------------------YNTRPLDTIYSNFIDALPVVKYCS----ENN-KRLIHFSTCEV  139 (386)
T ss_pred             -cCCEEEEcccccChhh--------------------hhhChHHHHHHHHHHHHHHHHHHH----hcC-CEEEEEeeeee
Confidence             4799999999753211                    011223456689999999998883    333 68999999754


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCC-CCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGW-PANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +..... .   ....+.+-.+.       ..+.....+-.+...+. ..+...|+.+|.+.+.+++.++... ++.+..+
T Consensus       140 Yg~~~~-~---~~~e~~p~~~~-------~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-g~~~~il  207 (386)
T PLN02427        140 YGKTIG-S---FLPKDHPLRQD-------PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN-GLEFTIV  207 (386)
T ss_pred             eCCCcC-C---CCCcccccccc-------cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc-CCceEEe
Confidence            321100 0   00000000000       00000000000000000 0123579999999999998876554 7888888


Q ss_pred             ecceeecCc
Q 039097          242 CPGYVKTEM  250 (290)
Q Consensus       242 ~PG~v~T~~  250 (290)
                      .|+.+..|.
T Consensus       208 R~~~vyGp~  216 (386)
T PLN02427        208 RPFNWIGPR  216 (386)
T ss_pred             cccceeCCC
Confidence            888777663

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.69  E-value=9e-17  Score=140.76  Aligned_cols=164  Identities=24%  Similarity=0.223  Sum_probs=119.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCC-CcE----EEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            9 AVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGF-DNV----IFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~----~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ||||||+|.||++++++|++.+. ++++++|++.++-+...++....+ .++    ..+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999985 799999999999998888864432 233    34578999999999998864    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+|+|.|+.-+...                    -.+...+.+++|+.|+.++++++.    +.+..++|+||+--+
T Consensus        77 -~pdiVfHaAA~KhVpl--------------------~E~~p~eav~tNv~GT~nv~~aa~----~~~v~~~v~ISTDKA  131 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVPL--------------------MEDNPFEAVKTNVLGTQNVAEAAI----EHGVERFVFISTDKA  131 (293)
T ss_dssp             -T-SEEEE------HHH--------------------HCCCHHHHHHHHCHHHHHHHHHHH----HTT-SEEEEEEECGC
T ss_pred             -CCCEEEEChhcCCCCh--------------------HHhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEcccccc
Confidence             8999999999864221                    234567889999999999999995    445679999998766


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+                                              ...||+||...+.++.+.+...  .+.++.+
T Consensus       132 v~P----------------------------------------------tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~  165 (293)
T PF02719_consen  132 VNP----------------------------------------------TNVMGATKRLAEKLVQAANQYSGNSDTKFSS  165 (293)
T ss_dssp             SS------------------------------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEE
T ss_pred             CCC----------------------------------------------CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEE
Confidence            543                                              3789999999999999999877  4555555


Q ss_pred             eecceee
Q 039097          241 VCPGYVK  247 (290)
Q Consensus       241 v~PG~v~  247 (290)
                      |.=|.|.
T Consensus       166 VRFGNVl  172 (293)
T PF02719_consen  166 VRFGNVL  172 (293)
T ss_dssp             EEE-EET
T ss_pred             EEeccee
Confidence            5555443

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.69  E-value=2.6e-15  Score=137.03  Aligned_cols=216  Identities=16%  Similarity=0.135  Sum_probs=139.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHH---HHHHHHHhcC------C-CcEEEEEeeCCCHH------
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGL---EAVEKLKHSG------F-DNVIFHQLDVADPA------   69 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~---~~~~~l~~~~------~-~~~~~~~~Dl~~~~------   69 (290)
                      +++||||+|+||++++++|+++|  ++|+++.|+.....   ...+.+....      . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  67999999865321   1112222111      1 36899999998652      


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      ...++.       ..+|++||||+....                       ...++..+++|+.++..+++.+..    .
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~-----------------------~~~~~~~~~~nv~g~~~ll~~a~~----~  126 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNW-----------------------VYPYSELRAANVLGTREVLRLAAS----G  126 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEecc-----------------------CCcHHHHhhhhhHHHHHHHHHHhh----C
Confidence            333222       369999999997531                       122456778999999999998843    3


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                      ...++|++||..........         +..                  ...+.....+.....|+.+|.+.+.+++.+
T Consensus       127 ~~~~~v~iSS~~v~~~~~~~---------~~~------------------~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  179 (367)
T TIGR01746       127 RAKPLHYVSTISVLAAIDLS---------TVT------------------EDDAIVTPPPGLAGGYAQSKWVAELLVREA  179 (367)
T ss_pred             CCceEEEEccccccCCcCCC---------Ccc------------------ccccccccccccCCChHHHHHHHHHHHHHH
Confidence            44579999998765432000         000                  000000000112357999999999999876


Q ss_pred             HhhCCCeEEEEeecceeecCcccC----------------------------CCCCChhhhccchhhhhhccCCCCceeE
Q 039097          230 AKKYPNFCINCVCPGYVKTEMTYN----------------------------AGRLTVEEGAESPVWLALLHKGGPSGLF  281 (290)
Q Consensus       230 a~e~~~i~vn~v~PG~v~T~~~~~----------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~  281 (290)
                      +..  +++++.+.||.+.++....                            ......+++++.++.++..+.....|..
T Consensus       180 ~~~--g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~  257 (367)
T TIGR01746       180 SDR--GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPV  257 (367)
T ss_pred             Hhc--CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCce
Confidence            553  8999999999998751110                            1134567888888877665542223555


Q ss_pred             eecCc
Q 039097          282 FSRKE  286 (290)
Q Consensus       282 ~~~~~  286 (290)
                      |...+
T Consensus       258 ~~v~~  262 (367)
T TIGR01746       258 FHVVN  262 (367)
T ss_pred             EEecC
Confidence            55443

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.68  E-value=6.5e-16  Score=139.23  Aligned_cols=205  Identities=19%  Similarity=0.092  Sum_probs=141.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++++||||+|+||+.++++|+++|++|++++|+++....    +.   ...+.++.+|+++.+++.++++       .+|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~---~~~~~~~~~D~~~~~~l~~~~~-------~~d   66 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE---GLDVEIVEGDLRDPASLRKAVA-------GCR   66 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc---cCCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            379999999999999999999999999999998765321    11   1247889999999998888776       589


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ++||+|+....                      ..+.+++.+++|+.++.++++++.    +...+++|++||...+...
T Consensus        67 ~vi~~a~~~~~----------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~  120 (328)
T TIGR03466        67 ALFHVAADYRL----------------------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVR  120 (328)
T ss_pred             EEEEeceeccc----------------------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcC
Confidence            99999985421                      123456789999999999999884    3445799999998654321


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCC--CchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPA--NAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      ...                              .+..+.....+  ....|+.+|.+.+.+++.++.+. ++.+..+.|+
T Consensus       121 ~~~------------------------------~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~  169 (328)
T TIGR03466       121 GDG------------------------------TPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK-GLPVVIVNPS  169 (328)
T ss_pred             CCC------------------------------CCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc-CCCEEEEeCC
Confidence            000                              00000000001  13579999999999999887765 7788888887


Q ss_pred             eeecCcccC-----------------------CCCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          245 YVKTEMTYN-----------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       245 ~v~T~~~~~-----------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+..+....                       ......+|+++.++..+..+   ..|..+..+
T Consensus       170 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~---~~~~~~~~~  230 (328)
T TIGR03466       170 TPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG---RIGERYILG  230 (328)
T ss_pred             ccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC---CCCceEEec
Confidence            776543211                       01235788888776665432   234444443

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.68  E-value=2e-15  Score=129.69  Aligned_cols=198  Identities=24%  Similarity=0.232  Sum_probs=147.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      ||||||+|.||.+++++|+++|+.|+.+.|+.........+.      ++.++.+|+.+.+.++++++..     .+|.+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~dl~~~~~~~~~~~~~-----~~d~v   69 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL------NVEFVIGDLTDKEQLEKLLEKA-----NIDVV   69 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT------TEEEEESETTSHHHHHHHHHHH-----TESEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc------eEEEEEeecccccccccccccc-----CceEE
Confidence            799999999999999999999999998888876654433332      5899999999999999999986     79999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT  168 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~  168 (290)
                      ||.|+.....                    .+.+.....++.|+.++.++++++.    +.+..++|++||....... .
T Consensus        70 i~~a~~~~~~--------------------~~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~i~~sS~~~y~~~-~  124 (236)
T PF01370_consen   70 IHLAAFSSNP--------------------ESFEDPEEIIEANVQGTRNLLEAAR----EAGVKRFIFLSSASVYGDP-D  124 (236)
T ss_dssp             EEEBSSSSHH--------------------HHHHSHHHHHHHHHHHHHHHHHHHH----HHTTSEEEEEEEGGGGTSS-S
T ss_pred             EEeecccccc--------------------ccccccccccccccccccccccccc----ccccccccccccccccccc-c
Confidence            9999975210                    0335677888999999999999994    4455799999995332211 0


Q ss_pred             hhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeec
Q 039097          169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKT  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T  248 (290)
                      .                              .+-.+... ..+...|+.+|...+.+.+.+..+. ++++..+.|+.+..
T Consensus       125 ~------------------------------~~~~e~~~-~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~~R~~~vyG  172 (236)
T PF01370_consen  125 G------------------------------EPIDEDSP-INPLSPYGASKRAAEELLRDYAKKY-GLRVTILRPPNVYG  172 (236)
T ss_dssp             S------------------------------SSBETTSG-CCHSSHHHHHHHHHHHHHHHHHHHH-TSEEEEEEESEEES
T ss_pred             c------------------------------cccccccc-ccccccccccccccccccccccccc-cccccccccccccc
Confidence            0                              00000000 0234569999999999999998877 89999999999988


Q ss_pred             Cc---ccCC--------------------------CCCChhhhccchhhhhhccC
Q 039097          249 EM---TYNA--------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       249 ~~---~~~~--------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.   ....                          .....+|+++.+++++..+.
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~  227 (236)
T PF01370_consen  173 PGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPK  227 (236)
T ss_dssp             TTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred             ccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCC
Confidence            87   1110                          12366888888888877666

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.66  E-value=3.3e-15  Score=136.35  Aligned_cols=215  Identities=12%  Similarity=0.073  Sum_probs=135.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC-CHHHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA-DPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~~   84 (290)
                      +++|||||+|.||++++++|+++ |++|+.++|+.....    .+..  ...+.++.+|++ +.+.+.++++       +
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~   68 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLVN--HPRMHFFEGDITINKEWIEYHVK-------K   68 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhcc--CCCeEEEeCCCCCCHHHHHHHHc-------C
Confidence            36999999999999999999986 699999998754322    1211  124888999998 6666555544       5


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+|+...+..                    ..++.+..+++|+.++.++++++.    +.+ .++|++||...+.
T Consensus        69 ~d~ViH~aa~~~~~~--------------------~~~~p~~~~~~n~~~~~~ll~aa~----~~~-~~~v~~SS~~vyg  123 (347)
T PRK11908         69 CDVILPLVAIATPAT--------------------YVKQPLRVFELDFEANLPIVRSAV----KYG-KHLVFPSTSEVYG  123 (347)
T ss_pred             CCEEEECcccCChHH--------------------hhcCcHHHHHHHHHHHHHHHHHHH----hcC-CeEEEEecceeec
Confidence            899999999753211                    123345678999999999999884    333 6999999985432


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      .. ...        +  ..++. .+.           ...+..  .+...|+.+|.+.+.+++.++.+. ++.+..+.|+
T Consensus       124 ~~-~~~--------~--~~ee~-~~~-----------~~~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilR~~  177 (347)
T PRK11908        124 MC-PDE--------E--FDPEA-SPL-----------VYGPIN--KPRWIYACSKQLMDRVIWAYGMEE-GLNFTLFRPF  177 (347)
T ss_pred             cC-CCc--------C--cCccc-ccc-----------ccCcCC--CccchHHHHHHHHHHHHHHHHHHc-CCCeEEEeee
Confidence            11 000        0  00000 000           000000  123579999999999999887665 5555556665


Q ss_pred             eeecCccc----------------------C------------CCCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          245 YVKTEMTY----------------------N------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       245 ~v~T~~~~----------------------~------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+..|...                      .            ...+..+|+++.++.++..+.....|..|...
T Consensus       178 ~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~  252 (347)
T PRK11908        178 NWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIG  252 (347)
T ss_pred             eeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeC
Confidence            55444210                      0            01357788888888877654322345555443

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.65  E-value=3.6e-15  Score=138.25  Aligned_cols=199  Identities=17%  Similarity=0.082  Sum_probs=136.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH--HHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE--AVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++++||||+|+||++++++|+++|++|++++|+..+...  ..+++.... ..+.++.+|++|.+++.++++.+.  
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~v~~v~~Dl~d~~~l~~~~~~~~--  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKEL-PGAEVVFGDVTDADSLRKVLFSEG--  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhc-CCceEEEeeCCCHHHHHHHHHHhC--
Confidence            457899999999999999999999999999999998754321  111111111 258899999999999999887531  


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       +++|+||||+|.....                         ..+.+++|+.++.++++++    ++.+.+++|++||..
T Consensus       135 -~~~D~Vi~~aa~~~~~-------------------------~~~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~  184 (390)
T PLN02657        135 -DPVDVVVSCLASRTGG-------------------------VKDSWKIDYQATKNSLDAG----REVGAKHFVLLSAIC  184 (390)
T ss_pred             -CCCcEEEECCccCCCC-------------------------CccchhhHHHHHHHHHHHH----HHcCCCEEEEEeecc
Confidence             1699999999843110                         1134567888888888887    445567999999985


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      ...+                                              ...|..+|...+...+.   +..++....+
T Consensus       185 v~~p----------------------------------------------~~~~~~sK~~~E~~l~~---~~~gl~~tIl  215 (390)
T PLN02657        185 VQKP----------------------------------------------LLEFQRAKLKFEAELQA---LDSDFTYSIV  215 (390)
T ss_pred             ccCc----------------------------------------------chHHHHHHHHHHHHHHh---ccCCCCEEEE
Confidence            4321                                              24577889888887654   2247777778


Q ss_pred             ecceeecCccc---------------C-----CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          242 CPGYVKTEMTY---------------N-----AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       242 ~PG~v~T~~~~---------------~-----~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .|+.+..++..               +     ..+.+.+|+|+.++..+..+.  ..|+.|...+
T Consensus       216 Rp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~--~~~~~~~Igg  278 (390)
T PLN02657        216 RPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES--KINKVLPIGG  278 (390)
T ss_pred             ccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc--ccCCEEEcCC
Confidence            87655432210               0     013566788888877775443  3456666543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.63  E-value=1.8e-14  Score=124.40  Aligned_cols=174  Identities=20%  Similarity=0.187  Sum_probs=123.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccH-HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGG-LEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++|||||+|+||+++++.++.+..  +|+.++.-.-.. .+.+..+.+  ..++.++++|++|.+.+.+++++.     
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~--~~~~~fv~~DI~D~~~v~~~~~~~-----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED--SPRYRFVQGDICDRELVDRLFKEY-----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc--CCCceEEeccccCHHHHHHHHHhc-----
Confidence            4789999999999999999999854  578877643221 122233322  237999999999999999988863     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+++|-|+..+.                    +.+.++....+++|+.|++.|++++..+..   .-++++||.-..+
T Consensus        74 ~~D~VvhfAAESHV--------------------DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~---~frf~HISTDEVY  130 (340)
T COG1088          74 QPDAVVHFAAESHV--------------------DRSIDGPAPFIQTNVVGTYTLLEAARKYWG---KFRFHHISTDEVY  130 (340)
T ss_pred             CCCeEEEechhccc--------------------cccccChhhhhhcchHHHHHHHHHHHHhcc---cceEEEecccccc
Confidence            79999999998752                    236677788999999999999999955443   1489999975433


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      .....         +.                +.+.+.+    . -.+.++|++|||+..+++|++...+ |+.+...
T Consensus       131 G~l~~---------~~----------------~~FtE~t----p-~~PsSPYSASKAasD~lVray~~TY-glp~~It  177 (340)
T COG1088         131 GDLGL---------DD----------------DAFTETT----P-YNPSSPYSASKAASDLLVRAYVRTY-GLPATIT  177 (340)
T ss_pred             ccccC---------CC----------------CCcccCC----C-CCCCCCcchhhhhHHHHHHHHHHHc-CCceEEe
Confidence            21100         00                0000111    0 1356889999999999999999998 5544333

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.62  E-value=6.8e-15  Score=135.53  Aligned_cols=180  Identities=18%  Similarity=0.140  Sum_probs=121.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +++++|||||+|.||++++++|.++|++|++++|.......   .    ......++.+|+++.+.+.++++       +
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~---~----~~~~~~~~~~Dl~d~~~~~~~~~-------~   85 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS---E----DMFCHEFHLVDLRVMENCLKVTK-------G   85 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc---c----ccccceEEECCCCCHHHHHHHHh-------C
Confidence            46899999999999999999999999999999986432111   0    00124678899999888776664       5


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||.|+.......                   ........+..|+.++.++++++    ++.+.+++|++||...+.
T Consensus        86 ~D~Vih~Aa~~~~~~~-------------------~~~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg  142 (370)
T PLN02695         86 VDHVFNLAADMGGMGF-------------------IQSNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYP  142 (370)
T ss_pred             CCEEEEcccccCCccc-------------------cccCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcC
Confidence            8999999996532111                   01122345678999999999988    444557999999975432


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC-CCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP-ANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .... .        ++                  ..+..+.+..| .+...|+.+|.+.+.+++.++..+ ++.+..+.|
T Consensus       143 ~~~~-~--------~~------------------~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~-g~~~~ilR~  194 (370)
T PLN02695        143 EFKQ-L--------ET------------------NVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF-GIECRIGRF  194 (370)
T ss_pred             Cccc-c--------Cc------------------CCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEE
Confidence            1100 0        00                  00000000001 234689999999999999887665 777777777


Q ss_pred             ceeecC
Q 039097          244 GYVKTE  249 (290)
Q Consensus       244 G~v~T~  249 (290)
                      +.+..|
T Consensus       195 ~~vyGp  200 (370)
T PLN02695        195 HNIYGP  200 (370)
T ss_pred             CCccCC
Confidence            777665

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.62  E-value=1.1e-14  Score=143.61  Aligned_cols=180  Identities=14%  Similarity=0.075  Sum_probs=122.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHH-HHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA-IHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~   82 (290)
                      ++++||||||+|.||++++++|+++ |++|+.++|.......    ...  ...+.++.+|+++..+ ++++++      
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~--~~~~~~~~gDl~d~~~~l~~~l~------  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLG--HPRFHFVEGDISIHSEWIEYHIK------  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcC--CCceEEEeccccCcHHHHHHHhc------
Confidence            4678999999999999999999986 7999999997643221    111  1358889999998655 344443      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+|||.|+...+..                    ..+..++.+++|+.++.++++++.    +.. .++|++||...
T Consensus       382 -~~D~ViHlAa~~~~~~--------------------~~~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~v  435 (660)
T PRK08125        382 -KCDVVLPLVAIATPIE--------------------YTRNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEV  435 (660)
T ss_pred             -CCCEEEECccccCchh--------------------hccCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhh
Confidence             6899999999764321                    122345678999999999999985    333 68999999754


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC--CCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      +... ..     ...+                     +..+.....|  .+...|+.||.+.+.+++.++.++ ++++..
T Consensus       436 yg~~-~~-----~~~~---------------------E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~-g~~~~i  487 (660)
T PRK08125        436 YGMC-TD-----KYFD---------------------EDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE-GLRFTL  487 (660)
T ss_pred             cCCC-CC-----CCcC---------------------ccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc-CCceEE
Confidence            3211 00     0000                     0000000001  123579999999999999988776 677777


Q ss_pred             eecceeecCc
Q 039097          241 VCPGYVKTEM  250 (290)
Q Consensus       241 v~PG~v~T~~  250 (290)
                      +.|+.+..|.
T Consensus       488 lR~~~vyGp~  497 (660)
T PRK08125        488 FRPFNWMGPR  497 (660)
T ss_pred             EEEceeeCCC
Confidence            8887777653

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.61  E-value=3.1e-14  Score=140.75  Aligned_cols=188  Identities=17%  Similarity=0.153  Sum_probs=125.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHh-cCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKH-SGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ...+.|+||||||+|.||++++++|+++  +++|+.++|.... .. ...+.. .....+.++.+|++|.+.+.+++.. 
T Consensus         2 ~~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~-~~-~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-   78 (668)
T PLN02260          2 ATYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC-SN-LKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-   78 (668)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc-ch-hhhhhhcccCCCeEEEECCCCChHHHHHHHhh-
Confidence            3456889999999999999999999998  6789988875311 11 111111 1123588999999999887766542 


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEE
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~i  157 (290)
                          .++|+|||+|+......                    +.++..+.+++|+.++.++++++.    +.+ .+++|++
T Consensus        79 ----~~~D~ViHlAa~~~~~~--------------------~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~vkr~I~~  130 (668)
T PLN02260         79 ----EGIDTIMHFAAQTHVDN--------------------SFGNSFEFTKNNIYGTHVLLEACK----VTGQIRRFIHV  130 (668)
T ss_pred             ----cCCCEEEECCCccCchh--------------------hhhCHHHHHHHHHHHHHHHHHHHH----hcCCCcEEEEE
Confidence                37999999999763211                    223345678999999999999884    333 4799999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                      ||...+......         +                   ..+..+... ..+...|+.+|.+.+.+++.++.++ ++.
T Consensus       131 SS~~vyg~~~~~---------~-------------------~~~~~E~~~-~~p~~~Y~~sK~~aE~~v~~~~~~~-~l~  180 (668)
T PLN02260        131 STDEVYGETDED---------A-------------------DVGNHEASQ-LLPTNPYSATKAGAEMLVMAYGRSY-GLP  180 (668)
T ss_pred             cchHHhCCCccc---------c-------------------ccCccccCC-CCCCCCcHHHHHHHHHHHHHHHHHc-CCC
Confidence            997543211000         0                   000000000 0124579999999999999887765 667


Q ss_pred             EEEeecceeecCc
Q 039097          238 INCVCPGYVKTEM  250 (290)
Q Consensus       238 vn~v~PG~v~T~~  250 (290)
                      +..+.|+.+..+-
T Consensus       181 ~vilR~~~VyGp~  193 (668)
T PLN02260        181 VITTRGNNVYGPN  193 (668)
T ss_pred             EEEECcccccCcC
Confidence            7777777666553

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.60  E-value=1.6e-14  Score=129.56  Aligned_cols=170  Identities=19%  Similarity=0.180  Sum_probs=111.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh--hcCCcc
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS--HFGKLD   86 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~id   86 (290)
                      +|||||+|.||++++++|+++|++++++.|+...... ..          .+..+|++|..+...+++++..  .++++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d   70 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV----------NLVDLDIADYMDKEDFLAQIMAGDDFGDIE   70 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-HH----------hhhhhhhhhhhhHHHHHHHHhcccccCCcc
Confidence            7999999999999999999999977766655433211 10          1234677776666666665542  345799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||......                      .+-...+++|+.++.++++++.    +.. .++|++||...+...
T Consensus        71 ~Vih~A~~~~~~~----------------------~~~~~~~~~n~~~t~~ll~~~~----~~~-~~~i~~SS~~vyg~~  123 (308)
T PRK11150         71 AIFHEGACSSTTE----------------------WDGKYMMDNNYQYSKELLHYCL----ERE-IPFLYASSAATYGGR  123 (308)
T ss_pred             EEEECceecCCcC----------------------CChHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEcchHHhCcC
Confidence            9999999643210                      0113468999999999999984    333 379999998543211


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..                               .+..+... ..+...|+.+|.+.+.+++.++.+. ++.+..+.|+.+
T Consensus       124 ~~-------------------------------~~~~E~~~-~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~v  170 (308)
T PRK11150        124 TD-------------------------------DFIEEREY-EKPLNVYGYSKFLFDEYVRQILPEA-NSQICGFRYFNV  170 (308)
T ss_pred             CC-------------------------------CCCccCCC-CCCCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeeeee
Confidence            00                               00000000 1234679999999999998887654 666666666665


Q ss_pred             ecC
Q 039097          247 KTE  249 (290)
Q Consensus       247 ~T~  249 (290)
                      ..+
T Consensus       171 yG~  173 (308)
T PRK11150        171 YGP  173 (308)
T ss_pred             cCC
Confidence            554

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.59  E-value=3.6e-14  Score=127.03  Aligned_cols=176  Identities=22%  Similarity=0.140  Sum_probs=125.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      +|||||+|.||++++++|+++|+.|+.++|...+.....        ..+.++.+|+++.+.+.+.++..     . |.+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~v   68 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--------SGVEFVVLDLTDRDLVDELAKGV-----P-DAV   68 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--------cccceeeecccchHHHHHHHhcC-----C-CEE
Confidence            999999999999999999999999999999876644322        24788999999996666655531     1 999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT  168 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~  168 (290)
                      ||+|+........                  .. .....+.+|+.++.++++++.    +....++|+.||....... .
T Consensus        69 ih~aa~~~~~~~~------------------~~-~~~~~~~~nv~gt~~ll~aa~----~~~~~~~v~~ss~~~~~~~-~  124 (314)
T COG0451          69 IHLAAQSSVPDSN------------------AS-DPAEFLDVNVDGTLNLLEAAR----AAGVKRFVFASSVSVVYGD-P  124 (314)
T ss_pred             EEccccCchhhhh------------------hh-CHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCCCceECCC-C
Confidence            9999987532210                  11 355789999999999999994    4566899996665544422 0


Q ss_pred             hhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeec
Q 039097          169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKT  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T  248 (290)
                      +.                             .+..+....+.+...|+.+|.+.+.+++.++. ..++.+..+.|+.+..
T Consensus       125 ~~-----------------------------~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~-~~~~~~~ilR~~~vyG  174 (314)
T COG0451         125 PP-----------------------------LPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR-LYGLPVVILRPFNVYG  174 (314)
T ss_pred             CC-----------------------------CCcccccCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCeEEEeeeeeeC
Confidence            00                             00000000001122799999999999999988 5578888888887776


Q ss_pred             Cccc
Q 039097          249 EMTY  252 (290)
Q Consensus       249 ~~~~  252 (290)
                      |...
T Consensus       175 p~~~  178 (314)
T COG0451         175 PGDK  178 (314)
T ss_pred             CCCC
Confidence            6533

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.58  E-value=4.9e-14  Score=127.13  Aligned_cols=111  Identities=17%  Similarity=0.142  Sum_probs=86.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++||||+|.||++++++|+++|++|++++|+..+...    +..   ..+.++.+|++|.+++.++++       .+|+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~---~~v~~v~~Dl~d~~~l~~al~-------g~d~   67 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKE---WGAELVYGDLSLPETLPPSFK-------GVTA   67 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhh---cCCEEEECCCCCHHHHHHHHC-------CCCE
Confidence            69999999999999999999999999999998654321    111   247889999999998887776       5899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      |||+++...                         .+.....++|+.++.++++++    ++.+..++|++||..
T Consensus        68 Vi~~~~~~~-------------------------~~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~  112 (317)
T CHL00194         68 IIDASTSRP-------------------------SDLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILN  112 (317)
T ss_pred             EEECCCCCC-------------------------CCccchhhhhHHHHHHHHHHH----HHcCCCEEEEecccc
Confidence            999876421                         112345678999999999888    445567999999864

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.57  E-value=5.3e-14  Score=125.93  Aligned_cols=144  Identities=19%  Similarity=0.110  Sum_probs=103.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|.||++++++|+++| +|+.++|...                  .+..|++|.+.+.+++++.     ++|+
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------~~~~Dl~d~~~~~~~~~~~-----~~D~   57 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------DYCGDFSNPEGVAETVRKI-----RPDV   57 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------cccCCCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999999 7888887631                  2457999999998888752     6899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+|+......                    ..++.+..+.+|+.++.++++++..    .+ .++|++||...+....
T Consensus        58 Vih~Aa~~~~~~--------------------~~~~~~~~~~~N~~~~~~l~~aa~~----~g-~~~v~~Ss~~Vy~~~~  112 (299)
T PRK09987         58 IVNAAAHTAVDK--------------------AESEPEFAQLLNATSVEAIAKAANE----VG-AWVVHYSTDYVFPGTG  112 (299)
T ss_pred             EEECCccCCcch--------------------hhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEccceEECCCC
Confidence            999999764211                    2233456778999999999999843    33 4899999865432110


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK  232 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e  232 (290)
                      .                               .+..+.+ .+.+...|+.+|.+.+.+++.+..+
T Consensus       113 ~-------------------------------~p~~E~~-~~~P~~~Yg~sK~~~E~~~~~~~~~  145 (299)
T PRK09987        113 D-------------------------------IPWQETD-ATAPLNVYGETKLAGEKALQEHCAK  145 (299)
T ss_pred             C-------------------------------CCcCCCC-CCCCCCHHHHHHHHHHHHHHHhCCC
Confidence            0                               0000000 1123467999999999999876543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.57  E-value=6.6e-14  Score=125.56  Aligned_cols=171  Identities=18%  Similarity=0.131  Sum_probs=112.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +|||||+|.||.+++++|+++|+ .|++++|.....  ...++.      ...+..|+.+.+.++.+.+.   .+.++|+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~~------~~~~~~d~~~~~~~~~~~~~---~~~~~D~   69 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNLA------DLVIADYIDKEDFLDRLEKG---AFGKIEA   69 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhhh------heeeeccCcchhHHHHHHhh---ccCCCCE
Confidence            68999999999999999999998 688887754321  111111      13456788887776665553   3458999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+|+....                      +.++.+..+++|+.++.++++.+..    .+ .++|++||...+... 
T Consensus        70 vvh~A~~~~~----------------------~~~~~~~~~~~n~~~~~~ll~~~~~----~~-~~~v~~SS~~vy~~~-  121 (314)
T TIGR02197        70 IFHQGACSDT----------------------TETDGEYMMENNYQYSKRLLDWCAE----KG-IPFIYASSAATYGDG-  121 (314)
T ss_pred             EEECccccCc----------------------cccchHHHHHHHHHHHHHHHHHHHH----hC-CcEEEEccHHhcCCC-
Confidence            9999996421                      2234567889999999999999843    33 479999996533211 


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHh-hCCCeEEEEeeccee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK-KYPNFCINCVCPGYV  246 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~-e~~~i~vn~v~PG~v  246 (290)
                      ..                               +..+.+....+...|+.+|.+.+.+++.... +..++.+..+.|+.+
T Consensus       122 ~~-------------------------------~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~v  170 (314)
T TIGR02197       122 EA-------------------------------GFREGRELERPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNV  170 (314)
T ss_pred             CC-------------------------------CcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeec
Confidence            00                               0000000001346799999999999987543 334556666666555


Q ss_pred             ecC
Q 039097          247 KTE  249 (290)
Q Consensus       247 ~T~  249 (290)
                      ..+
T Consensus       171 yG~  173 (314)
T TIGR02197       171 YGP  173 (314)
T ss_pred             cCC
Confidence            444

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.55  E-value=9.1e-14  Score=130.67  Aligned_cols=179  Identities=17%  Similarity=0.021  Sum_probs=115.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++++||||||+|.||++++++|+++|++|++++|......+.....  ....++.++..|+.+..     +       .
T Consensus       117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~--~~~~~~~~i~~D~~~~~-----l-------~  182 (442)
T PLN02206        117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHH--FSNPNFELIRHDVVEPI-----L-------L  182 (442)
T ss_pred             cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhh--ccCCceEEEECCccChh-----h-------c
Confidence            45789999999999999999999999999999987643222211111  11235778888987652     1       2


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||.|+...+..                    ..++..+.+++|+.++.++++++.    +.+ .++|++||...+
T Consensus       183 ~~D~ViHlAa~~~~~~--------------------~~~~p~~~~~~Nv~gt~nLleaa~----~~g-~r~V~~SS~~VY  237 (442)
T PLN02206        183 EVDQIYHLACPASPVH--------------------YKFNPVKTIKTNVVGTLNMLGLAK----RVG-ARFLLTSTSEVY  237 (442)
T ss_pred             CCCEEEEeeeecchhh--------------------hhcCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECChHHh
Confidence            5899999999753211                    112346789999999999999984    333 489999997544


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ......      ..+.     ..+.           .     .........|+.+|.+.+.+++.+...+ ++.+..+.|
T Consensus       238 g~~~~~------p~~E-----~~~~-----------~-----~~P~~~~s~Y~~SK~~aE~~~~~y~~~~-g~~~~ilR~  289 (442)
T PLN02206        238 GDPLQH------PQVE-----TYWG-----------N-----VNPIGVRSCYDEGKRTAETLTMDYHRGA-NVEVRIARI  289 (442)
T ss_pred             CCCCCC------CCCc-----cccc-----------c-----CCCCCccchHHHHHHHHHHHHHHHHHHh-CCCeEEEEe
Confidence            221000      0000     0000           0     0000124679999999999998876654 566655555


Q ss_pred             ceeecC
Q 039097          244 GYVKTE  249 (290)
Q Consensus       244 G~v~T~  249 (290)
                      +.+..|
T Consensus       290 ~~vyGp  295 (442)
T PLN02206        290 FNTYGP  295 (442)
T ss_pred             ccccCC
Confidence            544443

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.55  E-value=5.7e-14  Score=125.50  Aligned_cols=164  Identities=14%  Similarity=0.125  Sum_probs=112.5

Q ss_pred             EEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEEE
Q 039097           10 VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILV   89 (290)
Q Consensus        10 lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~li   89 (290)
                      |||||+|.||+.+++.|+++|++|++..+.                     ..+|+++.+++.++++..     ++|+||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~---------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vi   54 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH---------------------KELDLTRQADVEAFFAKE-----KPTYVI   54 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc---------------------ccCCCCCHHHHHHHHhcc-----CCCEEE
Confidence            699999999999999999999988766432                     148999999988887762     689999


Q ss_pred             EccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccch
Q 039097           90 NNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTH  169 (290)
Q Consensus        90 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~  169 (290)
                      |+|+.......                   ..+...+.+++|+.++.++++.+.    +.+.+++|++||...+....  
T Consensus        55 h~A~~~~~~~~-------------------~~~~~~~~~~~n~~~~~~ll~~~~----~~~~~~~i~~SS~~vyg~~~--  109 (306)
T PLN02725         55 LAAAKVGGIHA-------------------NMTYPADFIRENLQIQTNVIDAAY----RHGVKKLLFLGSSCIYPKFA--  109 (306)
T ss_pred             Eeeeeecccch-------------------hhhCcHHHHHHHhHHHHHHHHHHH----HcCCCeEEEeCceeecCCCC--
Confidence            99997532110                   112334678899999999999994    34457999999975322110  


Q ss_pred             hhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeecC
Q 039097          170 EWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTE  249 (290)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  249 (290)
                             ..+  .++..+           .+ .    ...+....|+.+|.+.+.+.+.+..+. ++++..+.|+.+..+
T Consensus       110 -------~~~--~~E~~~-----------~~-~----~~~p~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~R~~~vyG~  163 (306)
T PLN02725        110 -------PQP--IPETAL-----------LT-G----PPEPTNEWYAIAKIAGIKMCQAYRIQY-GWDAISGMPTNLYGP  163 (306)
T ss_pred             -------CCC--CCHHHh-----------cc-C----CCCCCcchHHHHHHHHHHHHHHHHHHh-CCCEEEEEecceeCC
Confidence                   000  000000           00 0    000222459999999999998887665 677888888777666


Q ss_pred             c
Q 039097          250 M  250 (290)
Q Consensus       250 ~  250 (290)
                      .
T Consensus       164 ~  164 (306)
T PLN02725        164 H  164 (306)
T ss_pred             C
Confidence            3

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.55  E-value=1.3e-13  Score=122.32  Aligned_cols=177  Identities=24%  Similarity=0.194  Sum_probs=123.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|.||.+++++|+++|++|++++|+                      .+|+.+.+++.++++..     ++|+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------~~d~~~~~~~~~~~~~~-----~~d~   53 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------QLDLTDPEALERLLRAI-----RPDA   53 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------ccCCCCHHHHHHHHHhC-----CCCE
Confidence            47999999999999999999999999999885                      47999999998888753     6899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      +||+||......                    ........+++|+.++.++++++.    +.+ .++|++||...+....
T Consensus        54 vi~~a~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~Ss~~vy~~~~  108 (287)
T TIGR01214        54 VVNTAAYTDVDG--------------------AESDPEKAFAVNALAPQNLARAAA----RHG-ARLVHISTDYVFDGEG  108 (287)
T ss_pred             EEECCccccccc--------------------cccCHHHHHHHHHHHHHHHHHHHH----HcC-CeEEEEeeeeeecCCC
Confidence            999999753211                    122345678999999999999984    333 4899999964332100


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+..+.+ .+.+...|+.+|.+.+.+++.+     +..+..+.|+.+.
T Consensus       109 ~-------------------------------~~~~E~~-~~~~~~~Y~~~K~~~E~~~~~~-----~~~~~ilR~~~v~  151 (287)
T TIGR01214       109 K-------------------------------RPYREDD-ATNPLNVYGQSKLAGEQAIRAA-----GPNALIVRTSWLY  151 (287)
T ss_pred             C-------------------------------CCCCCCC-CCCCcchhhHHHHHHHHHHHHh-----CCCeEEEEeeecc
Confidence            0                               0000000 0123467999999999998765     3456777777776


Q ss_pred             cCccc-C----------------------CCCCChhhhccchhhhhhcc
Q 039097          248 TEMTY-N----------------------AGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       248 T~~~~-~----------------------~~~~~~e~~a~~~~~l~~~~  273 (290)
                      .+... .                      ......+|+++.++.++..+
T Consensus       152 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  200 (287)
T TIGR01214       152 GGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRL  200 (287)
T ss_pred             cCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhc
Confidence            55321 1                      01234678888888877543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.51  E-value=2.3e-13  Score=118.69  Aligned_cols=180  Identities=16%  Similarity=0.170  Sum_probs=102.3

Q ss_pred             EecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHH----Hhc---------CCCcEEEEEeeCCCHH------
Q 039097           11 VTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKL----KHS---------GFDNVIFHQLDVADPA------   69 (290)
Q Consensus        11 ITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l----~~~---------~~~~~~~~~~Dl~~~~------   69 (290)
                      ||||+|.||..+..+|++++.  +|+.+.|..+. ....+.+    .+.         ..++++++.+|++++.      
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~-~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~   79 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSS-QSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE   79 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSH-HHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCccc-ccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence            799999999999999999986  89999997643 2222222    211         1468999999999853      


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      +..++.+       .+|+|||+|+......                       ...+..++|+.|+.++++.+.    ..
T Consensus        80 ~~~~L~~-------~v~~IiH~Aa~v~~~~-----------------------~~~~~~~~NV~gt~~ll~la~----~~  125 (249)
T PF07993_consen   80 DYQELAE-------EVDVIIHCAASVNFNA-----------------------PYSELRAVNVDGTRNLLRLAA----QG  125 (249)
T ss_dssp             HHHHHHH-------H--EEEE--SS-SBS------------------------S--EEHHHHHHHHHHHHHHHT----SS
T ss_pred             Hhhcccc-------ccceeeecchhhhhcc-----------------------cchhhhhhHHHHHHHHHHHHH----hc
Confidence            3333433       5899999999875332                       344578999999999999995    33


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                      ...+++++|| +...+......       .+.....        ......       ..+.....|..||...|.+++..
T Consensus       126 ~~~~~~~iST-a~v~~~~~~~~-------~~~~~~~--------~~~~~~-------~~~~~~~gY~~SK~~aE~~l~~a  182 (249)
T PF07993_consen  126 KRKRFHYIST-AYVAGSRPGTI-------EEKVYPE--------EEDDLD-------PPQGFPNGYEQSKWVAERLLREA  182 (249)
T ss_dssp             S---EEEEEE-GGGTTS-TTT---------SSS-HH--------H--EEE---------TTSEE-HHHHHHHHHHHHHHH
T ss_pred             cCcceEEecc-ccccCCCCCcc-------ccccccc--------ccccch-------hhccCCccHHHHHHHHHHHHHHH
Confidence            3449999999 32222110000       0000000        000000       00123458999999999999988


Q ss_pred             HhhCCCeEEEEeecceeecC
Q 039097          230 AKKYPNFCINCVCPGYVKTE  249 (290)
Q Consensus       230 a~e~~~i~vn~v~PG~v~T~  249 (290)
                      +.+. ++.+..+.||.|...
T Consensus       183 ~~~~-g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  183 AQRH-GLPVTIYRPGIIVGD  201 (249)
T ss_dssp             HHHH----EEEEEE-EEE-S
T ss_pred             HhcC-CceEEEEecCccccc
Confidence            7763 788999999999884

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.50  E-value=3.7e-13  Score=126.38  Aligned_cols=178  Identities=17%  Similarity=0.048  Sum_probs=114.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.++||||||+|.||++++++|+++|++|++++|......+....+.  ....+.++..|+.+..     +       .+
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~--~~~~~~~~~~Di~~~~-----~-------~~  184 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLF--GNPRFELIRHDVVEPI-----L-------LE  184 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhc--cCCceEEEECcccccc-----c-------cC
Confidence            34689999999999999999999999999999986433222222221  1225778888887642     1       25


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+|+...+..                    ...+..+.+++|+.++.++++++..    .+ .++|++||...+.
T Consensus       185 ~D~ViHlAa~~~~~~--------------------~~~~p~~~~~~Nv~gT~nLleaa~~----~g-~r~V~~SS~~VYg  239 (436)
T PLN02166        185 VDQIYHLACPASPVH--------------------YKYNPVKTIKTNVMGTLNMLGLAKR----VG-ARFLLTSTSEVYG  239 (436)
T ss_pred             CCEEEECceeccchh--------------------hccCHHHHHHHHHHHHHHHHHHHHH----hC-CEEEEECcHHHhC
Confidence            899999999753211                    1123467899999999999999843    33 4899999875332


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      .....         +  ..+..+.                ......+...|+.+|.+.+.+++.+.... ++.+..+.|+
T Consensus       240 ~~~~~---------p--~~E~~~~----------------~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~-~l~~~ilR~~  291 (436)
T PLN02166        240 DPLEH---------P--QKETYWG----------------NVNPIGERSCYDEGKRTAETLAMDYHRGA-GVEVRIARIF  291 (436)
T ss_pred             CCCCC---------C--CCccccc----------------cCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCCeEEEEEc
Confidence            11000         0  0000000                00000234679999999999999887654 5666555555


Q ss_pred             eeecC
Q 039097          245 YVKTE  249 (290)
Q Consensus       245 ~v~T~  249 (290)
                      .+..+
T Consensus       292 ~vYGp  296 (436)
T PLN02166        292 NTYGP  296 (436)
T ss_pred             cccCC
Confidence            55444

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.47  E-value=6.6e-12  Score=99.37  Aligned_cols=210  Identities=15%  Similarity=0.055  Sum_probs=143.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |+.++|+|-||-|.+|.+.++.|-.++|-|.-++-.+++..           +.-.++..|-+=.++-+.+.+++-+.++
T Consensus         1 msagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------d~sI~V~~~~swtEQe~~v~~~vg~sL~   69 (236)
T KOG4022|consen    1 MSAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------DSSILVDGNKSWTEQEQSVLEQVGSSLQ   69 (236)
T ss_pred             CCCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------cceEEecCCcchhHHHHHHHHHHHHhhc
Confidence            35678999999999999999999999999988887654321           1234445555444666666666666544


Q ss_pred             --CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           84 --KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        84 --~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|.+++.||-.........           .    -..+.+-++.-.+.....-.+..-.+++  ++|-+-....-.
T Consensus        70 gekvDav~CVAGGWAGGnAksK-----------d----l~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GGLL~LtGAka  132 (236)
T KOG4022|consen   70 GEKVDAVFCVAGGWAGGNAKSK-----------D----LVKNADLMWKQSVWTSAISAKLATTHLK--PGGLLQLTGAKA  132 (236)
T ss_pred             ccccceEEEeeccccCCCcchh-----------h----hhhchhhHHHHHHHHHHHHHHHHHhccC--CCceeeeccccc
Confidence              79999999987643322210           0    1122233344444444444444445555  445555555544


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~  237 (290)
                      +..+.                                           |+...|+++|+|+.+++++|+.+-    ++-.
T Consensus       133 Al~gT-------------------------------------------PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsa  169 (236)
T KOG4022|consen  133 ALGGT-------------------------------------------PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSA  169 (236)
T ss_pred             ccCCC-------------------------------------------CcccchhHHHHHHHHHHHHhcccccCCCCCce
Confidence            44433                                           778999999999999999999886    3677


Q ss_pred             EEEeecceeecCcccCCCC-------CChhhhccchhhhhhccCCCCceeEeec
Q 039097          238 INCVCPGYVKTEMTYNAGR-------LTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~~~-------~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      +.+|.|-..+|||.+.+-+       ...+.+++..+.+........+|.+++.
T Consensus       170 a~~ilPVTLDTPMNRKwMP~ADfssWTPL~fi~e~flkWtt~~~RPssGsLlqi  223 (236)
T KOG4022|consen  170 ALTILPVTLDTPMNRKWMPNADFSSWTPLSFISEHFLKWTTETSRPSSGSLLQI  223 (236)
T ss_pred             eEEEeeeeccCccccccCCCCcccCcccHHHHHHHHHHHhccCCCCCCCceEEE
Confidence            8899999999999998742       2347778888888777777777877654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.47  E-value=3.4e-12  Score=105.69  Aligned_cols=170  Identities=18%  Similarity=0.129  Sum_probs=120.8

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      |+|+||+|.+|+.++++|+++|++|+++.|++++.++         ...++++.+|+.|.+++.+.++       +.|.+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------~~~~~~~~~d~~d~~~~~~al~-------~~d~v   64 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------SPGVEIIQGDLFDPDSVKAALK-------GADAV   64 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------CTTEEEEESCTTCHHHHHHHHT-------TSSEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------ccccccceeeehhhhhhhhhhh-------hcchh
Confidence            6999999999999999999999999999999887665         2469999999999988888777       68999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT  168 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~  168 (290)
                      |+++|...                         .+            ...++.++..+++.+.+++|++||.........
T Consensus        65 i~~~~~~~-------------------------~~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~  107 (183)
T PF13460_consen   65 IHAAGPPP-------------------------KD------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPG  107 (183)
T ss_dssp             EECCHSTT-------------------------TH------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTS
T ss_pred             hhhhhhhc-------------------------cc------------ccccccccccccccccccceeeeccccCCCCCc
Confidence            99998531                         11            344555555557677789999998875442210


Q ss_pred             hhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeec
Q 039097          169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKT  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T  248 (290)
                      ..                                  ....++....|...|...+.+.+    + .+++...+.||++..
T Consensus       108 ~~----------------------------------~~~~~~~~~~~~~~~~~~e~~~~----~-~~~~~~ivrp~~~~~  148 (183)
T PF13460_consen  108 LF----------------------------------SDEDKPIFPEYARDKREAEEALR----E-SGLNWTIVRPGWIYG  148 (183)
T ss_dssp             EE----------------------------------EGGTCGGGHHHHHHHHHHHHHHH----H-STSEEEEEEESEEEB
T ss_pred             cc----------------------------------ccccccchhhhHHHHHHHHHHHH----h-cCCCEEEEECcEeEe
Confidence            00                                  00001222466777776665552    2 388999999999988


Q ss_pred             CcccCC-----------CCCChhhhccchhhhh
Q 039097          249 EMTYNA-----------GRLTVEEGAESPVWLA  270 (290)
Q Consensus       249 ~~~~~~-----------~~~~~e~~a~~~~~l~  270 (290)
                      +.....           ...+.+|+|+.++..+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  149 NPSRSYRLIKEGGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             TTSSSEEEESSTSTTSHCEEEHHHHHHHHHHHH
T ss_pred             CCCcceeEEeccCCCCcCcCCHHHHHHHHHHHh
Confidence            763321           2346677777666654

...

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.46  E-value=1.8e-12  Score=127.95  Aligned_cols=175  Identities=21%  Similarity=0.185  Sum_probs=115.7

Q ss_pred             EEEEecCCCchhHHHHHHHH--HCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHH--HHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAA--IHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~--~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~--v~~~~~~~~~~~   82 (290)
                      ++|||||+|.||++++++|+  .+|++|++++|+...  ...+.+... ...++.++.+|+++.+.  ..+.++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL--SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH--HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  579999999996532  222222221 22468899999998531  01112222    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      .++|+|||+||.....                       ....+..++|+.++.++++.+    ++.+.+++|++||...
T Consensus        76 ~~~D~Vih~Aa~~~~~-----------------------~~~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v  128 (657)
T PRK07201         76 GDIDHVVHLAAIYDLT-----------------------ADEEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAV  128 (657)
T ss_pred             cCCCEEEECceeecCC-----------------------CCHHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEecccc
Confidence            3799999999975321                       123456789999999999888    4445679999999765


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ......          +  ..+..+.               ..   ......|+.+|.+.+.+.+.    ..++.+..+.
T Consensus       129 ~g~~~~----------~--~~e~~~~---------------~~---~~~~~~Y~~sK~~~E~~~~~----~~g~~~~ilR  174 (657)
T PRK07201        129 AGDYEG----------V--FREDDFD---------------EG---QGLPTPYHRTKFEAEKLVRE----ECGLPWRVYR  174 (657)
T ss_pred             ccCccC----------c--cccccch---------------hh---cCCCCchHHHHHHHHHHHHH----cCCCcEEEEc
Confidence            422100          0  0000000               00   01235699999999998863    3478888899


Q ss_pred             cceeecC
Q 039097          243 PGYVKTE  249 (290)
Q Consensus       243 PG~v~T~  249 (290)
                      |+.+..+
T Consensus       175 p~~v~G~  181 (657)
T PRK07201        175 PAVVVGD  181 (657)
T ss_pred             CCeeeec
Confidence            9888664

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.44  E-value=5.4e-12  Score=110.19  Aligned_cols=176  Identities=26%  Similarity=0.243  Sum_probs=126.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      +||||++|-+|.+++++|. .++.|+.++|..                      +|++|.+.+.+++++.     ++|+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------~Ditd~~~v~~~i~~~-----~PDvV   54 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------LDITDPDAVLEVIRET-----RPDVV   54 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------ccccChHHHHHHHHhh-----CCCEE
Confidence            9999999999999999999 778999988874                      8999999999999986     89999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT  168 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~  168 (290)
                      ||+|++.....                    -..+-+..+.+|..++.++.+++    ++- +..+|++|+-...-+.. 
T Consensus        55 In~AAyt~vD~--------------------aE~~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~-  108 (281)
T COG1091          55 INAAAYTAVDK--------------------AESEPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEK-  108 (281)
T ss_pred             EECcccccccc--------------------ccCCHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCC-
Confidence            99999874322                    34456889999999999999999    322 46999999854322210 


Q ss_pred             hhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeec
Q 039097          169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKT  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T  248 (290)
                                                    ..+..+. -.|.+...||.||.+.|..++.....+     ..+...|+..
T Consensus       109 ------------------------------~~~Y~E~-D~~~P~nvYG~sKl~GE~~v~~~~~~~-----~I~Rtswv~g  152 (281)
T COG1091         109 ------------------------------GGPYKET-DTPNPLNVYGRSKLAGEEAVRAAGPRH-----LILRTSWVYG  152 (281)
T ss_pred             ------------------------------CCCCCCC-CCCCChhhhhHHHHHHHHHHHHhCCCE-----EEEEeeeeec
Confidence                                          0011111 123456799999999999998765332     2222333333


Q ss_pred             CcccCC----------------------CCCChhhhccchhhhhhccC
Q 039097          249 EMTYNA----------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       249 ~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ....++                      .|...+++|+.+..++....
T Consensus       153 ~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~  200 (281)
T COG1091         153 EYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK  200 (281)
T ss_pred             CCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc
Confidence            322221                      35677899999888766443

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.43  E-value=1.1e-12  Score=116.68  Aligned_cols=178  Identities=21%  Similarity=0.193  Sum_probs=117.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|.||.++++.|.++|+.|+.++|.                      .+|++|.+++.+++++.     ++|+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~----------------------~~dl~d~~~~~~~~~~~-----~pd~   54 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS----------------------DLDLTDPEAVAKLLEAF-----KPDV   54 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT----------------------CS-TTSHHHHHHHHHHH-------SE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch----------------------hcCCCCHHHHHHHHHHh-----CCCe
Confidence            79999999999999999999999999998777                      58999999999999876     7999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+||+..+.                    ...++-+..+.+|+.++..+.+.+..    . +.++|++||....-+..
T Consensus        55 Vin~aa~~~~~--------------------~ce~~p~~a~~iN~~~~~~la~~~~~----~-~~~li~~STd~VFdG~~  109 (286)
T PF04321_consen   55 VINCAAYTNVD--------------------ACEKNPEEAYAINVDATKNLAEACKE----R-GARLIHISTDYVFDGDK  109 (286)
T ss_dssp             EEE------HH--------------------HHHHSHHHHHHHHTHHHHHHHHHHHH----C-T-EEEEEEEGGGS-SST
T ss_pred             EeccceeecHH--------------------hhhhChhhhHHHhhHHHHHHHHHHHH----c-CCcEEEeeccEEEcCCc
Confidence            99999986211                    13345677899999999999999943    2 46999999974332210


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+. ..+..+.+...||.+|...|..++..   .+  +...+.++++.
T Consensus       110 ~-------------------------------~~y-~E~d~~~P~~~YG~~K~~~E~~v~~~---~~--~~~IlR~~~~~  152 (286)
T PF04321_consen  110 G-------------------------------GPY-TEDDPPNPLNVYGRSKLEGEQAVRAA---CP--NALILRTSWVY  152 (286)
T ss_dssp             S-------------------------------SSB--TTS----SSHHHHHHHHHHHHHHHH----S--SEEEEEE-SEE
T ss_pred             c-------------------------------ccc-ccCCCCCCCCHHHHHHHHHHHHHHHh---cC--CEEEEecceec
Confidence            0                               000 00111234689999999999998762   33  44456666666


Q ss_pred             cCcccCC----------------------CCCChhhhccchhhhhhccC
Q 039097          248 TEMTYNA----------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       248 T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .+-..++                      .+...+++|+.++.++....
T Consensus       153 g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~  201 (286)
T PF04321_consen  153 GPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNL  201 (286)
T ss_dssp             SSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHH
T ss_pred             ccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcc
Confidence            6522221                      24567888888888876554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.42  E-value=7.6e-12  Score=112.03  Aligned_cols=186  Identities=19%  Similarity=0.200  Sum_probs=126.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCccc--HHHHHHHH-------HhcCCCcEEEEEeeCC------CHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKG--GLEAVEKL-------KHSGFDNVIFHQLDVA------DPAA   70 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~--~~~~~~~l-------~~~~~~~~~~~~~Dl~------~~~~   70 (290)
                      +++++|||+|.+|+.+..+|+.+- .+|+.+.|-.+.  +.+.+++.       .+...++++++..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999875 599999886542  12222221       1234568999999998      3344


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD  150 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~  150 (290)
                      ..++++       .+|.+||||+..+..                       ....+....|+.|+..+++.+    ...+
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v-----------------------~pYs~L~~~NVlGT~evlrLa----~~gk  126 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV-----------------------FPYSELRGANVLGTAEVLRLA----ATGK  126 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc-----------------------CcHHHhcCcchHhHHHHHHHH----hcCC
Confidence            444444       589999999987532                       224567889999999999998    3344


Q ss_pred             CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 039097          151 SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA  230 (290)
Q Consensus       151 ~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la  230 (290)
                      .+.+.+|||++.......+....                       +...-++.....-....+|+.||.+.|.+++.-.
T Consensus       127 ~Kp~~yVSsisv~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~  183 (382)
T COG3320         127 PKPLHYVSSISVGETEYYSNFTV-----------------------DFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAG  183 (382)
T ss_pred             CceeEEEeeeeeccccccCCCcc-----------------------ccccccccccccCccCCCcchhHHHHHHHHHHHh
Confidence            56799999987654332111000                       0000000000111345789999999999998655


Q ss_pred             hhCCCeEEEEeecceeecCcc
Q 039097          231 KKYPNFCINCVCPGYVKTEMT  251 (290)
Q Consensus       231 ~e~~~i~vn~v~PG~v~T~~~  251 (290)
                      ..  |.++..+.||+|..+-.
T Consensus       184 ~r--GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         184 DR--GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             hc--CCCeEEEecCeeeccCc
Confidence            54  99999999999977654

>PLN02996 fatty acyl-CoA reductase

Probab=99.42  E-value=9.8e-12  Score=118.47  Aligned_cols=127  Identities=18%  Similarity=0.120  Sum_probs=89.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCccc--HHHHH-HHHH---------hcC--------CCcEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDEKG--GLEAV-EKLK---------HSG--------FDNVIF   60 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~~~--~~~~~-~~l~---------~~~--------~~~~~~   60 (290)
                      ++||+++||||+|.||..+++.|++.+.   +|+++.|....  ..+.. .++.         +..        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            5799999999999999999999998643   67888886532  22111 1211         111        146899


Q ss_pred             EEeeCCC-------HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccc
Q 039097           61 HQLDVAD-------PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYL  133 (290)
Q Consensus        61 ~~~Dl~~-------~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~  133 (290)
                      +.+|+++       .+.++++++       ++|+|||+|+....                       .+..+..+++|+.
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----------------------~~~~~~~~~~Nv~  138 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----------------------DERYDVALGINTL  138 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----------------------cCCHHHHHHHHHH
Confidence            9999984       333444444       58999999997631                       1235678999999


Q ss_pred             hHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097          134 GAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus       134 ~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      |+.++++.+...   ....++|++||....
T Consensus       139 gt~~ll~~a~~~---~~~k~~V~vST~~vy  165 (491)
T PLN02996        139 GALNVLNFAKKC---VKVKMLLHVSTAYVC  165 (491)
T ss_pred             HHHHHHHHHHhc---CCCCeEEEEeeeEEe
Confidence            999999988432   134589999987654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.37  E-value=1.4e-11  Score=111.28  Aligned_cols=186  Identities=16%  Similarity=0.081  Sum_probs=130.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++.+++||||+|.+|++++++|.+.+  ..|.++|..+....-..++. ......+.++.+|+.+..++.+.++     
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~-~~~~~~v~~~~~D~~~~~~i~~a~~-----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT-GFRSGRVTVILGDLLDANSISNAFQ-----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh-cccCCceeEEecchhhhhhhhhhcc-----
Confidence            467899999999999999999999998  68999998875322111111 1123579999999999999988888     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .. .+||+|+...+.-                    -..+.+.++++|+.|+.++.+.+    ++.+..++|++||..
T Consensus        76 --~~-~Vvh~aa~~~~~~--------------------~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~  128 (361)
T KOG1430|consen   76 --GA-VVVHCAASPVPDF--------------------VENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAY  128 (361)
T ss_pred             --Cc-eEEEeccccCccc--------------------cccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCce
Confidence              45 6777776542211                    12246778999999999999999    666778999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC-CCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP-ANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..++...                             ..+. .+...-| ...-.|+.||+-.|.+++..+. -....-.+
T Consensus       129 Vvf~g~~-----------------------------~~n~-~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~-~~~l~T~a  177 (361)
T KOG1430|consen  129 VVFGGEP-----------------------------IING-DESLPYPLKHIDPYGESKALAEKLVLEANG-SDDLYTCA  177 (361)
T ss_pred             EEeCCee-----------------------------cccC-CCCCCCccccccccchHHHHHHHHHHHhcC-CCCeeEEE
Confidence            7765421                             0000 0000111 1124899999999999987664 22466677


Q ss_pred             eecceeecCcccC
Q 039097          241 VCPGYVKTEMTYN  253 (290)
Q Consensus       241 v~PG~v~T~~~~~  253 (290)
                      +.|-.|..|....
T Consensus       178 LR~~~IYGpgd~~  190 (361)
T KOG1430|consen  178 LRPPGIYGPGDKR  190 (361)
T ss_pred             EccccccCCCCcc
Confidence            7787777776554

>PLN02778 3,5-epimerase/4-reductase

Probab=99.34  E-value=2.8e-11  Score=108.35  Aligned_cols=104  Identities=16%  Similarity=0.124  Sum_probs=72.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ..+++|||||+|.||++++++|+++|++|+...                         .|+.+.+.+...++.     .+
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------~~~~~~~~v~~~l~~-----~~   57 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------GRLENRASLEADIDA-----VK   57 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------CccCCHHHHHHHHHh-----cC
Confidence            357899999999999999999999999987532                         234444555444443     26


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +|+|||+||........                 ...+...+.+++|+.++.++++++..    .+. +.+++||.
T Consensus        58 ~D~ViH~Aa~~~~~~~~-----------------~~~~~p~~~~~~Nv~gt~~ll~aa~~----~gv-~~v~~sS~  111 (298)
T PLN02778         58 PTHVFNAAGVTGRPNVD-----------------WCESHKVETIRANVVGTLTLADVCRE----RGL-VLTNYATG  111 (298)
T ss_pred             CCEEEECCcccCCCCch-----------------hhhhCHHHHHHHHHHHHHHHHHHHHH----hCC-CEEEEecc
Confidence            89999999986432100                 02244567899999999999999943    333 34555543

>PRK05865 hypothetical protein; Provisional

Probab=99.32  E-value=2.8e-11  Score=120.66  Aligned_cols=103  Identities=25%  Similarity=0.264  Sum_probs=84.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++||||+|+||++++++|+++|++|++++|+....      .    ...+.++.+|+++.+++.++++       ++|+
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~----~~~v~~v~gDL~D~~~l~~al~-------~vD~   64 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W----PSSADFIAADIRDATAVESAMT-------GADV   64 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c----ccCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            699999999999999999999999999999975321      1    1247889999999999888776       5899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      |||+|+...                       .      .+++|+.++.++++++    ++.+.++||++||.
T Consensus        65 VVHlAa~~~-----------------------~------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~  104 (854)
T PRK05865         65 VAHCAWVRG-----------------------R------NDHINIDGTANVLKAM----AETGTGRIVFTSSG  104 (854)
T ss_pred             EEECCCccc-----------------------c------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCc
Confidence            999998531                       1      4678999999888877    44556799999985

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=2e-11  Score=104.98  Aligned_cols=186  Identities=19%  Similarity=0.129  Sum_probs=132.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH---hcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK---HSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++|++||||-+|--|.-+|+.|+++||.|..+.|+........-.+.   .....+++++.+|++|...+.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            47999999999999999999999999999999887544332210222   222335899999999999999999987   


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|-+.|.|+..+..                    +|.+..+.+.+++.+|++++++++--+-  ....++...||..
T Consensus        78 --~PdEIYNLaAQS~V~--------------------vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE  133 (345)
T COG1089          78 --QPDEIYNLAAQSHVG--------------------VSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSE  133 (345)
T ss_pred             --Cchhheecccccccc--------------------ccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHH
Confidence              899999999976532                    2556677889999999999999883221  1235666666643


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-----CCe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-----PNF  236 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-----~~i  236 (290)
                      -.. ...                              ..|..++..+ .+.++|+++|....-++..+...+     .||
T Consensus       134 ~fG-~v~------------------------------~~pq~E~TPF-yPrSPYAvAKlYa~W~tvNYResYgl~AcnGI  181 (345)
T COG1089         134 LYG-LVQ------------------------------EIPQKETTPF-YPRSPYAVAKLYAYWITVNYRESYGLFACNGI  181 (345)
T ss_pred             hhc-Ccc------------------------------cCccccCCCC-CCCCHHHHHHHHHHheeeehHhhcCceeecce
Confidence            211 100                              0111111122 256899999999999998888887     378


Q ss_pred             EEEEeecceeecC
Q 039097          237 CINCVCPGYVKTE  249 (290)
Q Consensus       237 ~vn~v~PG~v~T~  249 (290)
                      -+|.=+|.-=.|=
T Consensus       182 LFNHESP~Rge~F  194 (345)
T COG1089         182 LFNHESPLRGETF  194 (345)
T ss_pred             eecCCCCCCccce
Confidence            8887777543333

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.26  E-value=2e-10  Score=101.75  Aligned_cols=98  Identities=18%  Similarity=0.145  Sum_probs=68.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      +|||||+|.||.++++.|+++|++|++++|++.......         ...  ..|+.. ..+       ...+.++|+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~--~~~~~~-~~~-------~~~~~~~D~V   61 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK---------WEG--YKPWAP-LAE-------SEALEGADAV   61 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc---------cee--eecccc-cch-------hhhcCCCCEE
Confidence            689999999999999999999999999999876543211         001  112221 111       1233579999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALI  143 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~  143 (290)
                      ||+||.......                  .+.+.....+++|+.++.++++++.
T Consensus        62 vh~a~~~~~~~~------------------~~~~~~~~~~~~n~~~~~~l~~a~~   98 (292)
T TIGR01777        62 INLAGEPIADKR------------------WTEERKQEIRDSRIDTTRALVEAIA   98 (292)
T ss_pred             EECCCCCccccc------------------CCHHHHHHHHhcccHHHHHHHHHHH
Confidence            999996432110                  1345566788999999999999984

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.24  E-value=5.6e-10  Score=108.03  Aligned_cols=127  Identities=13%  Similarity=0.176  Sum_probs=90.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCccc--HHHHH-HHH---------HhcC--------CCcEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDEKG--GLEAV-EKL---------KHSG--------FDNVIF   60 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~~~--~~~~~-~~l---------~~~~--------~~~~~~   60 (290)
                      +++|+++||||+|.||..+++.|++.+.   +|+++.|....  ..+.. +++         ++..        ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5689999999999999999999998754   67888886432  22222 122         1111        246899


Q ss_pred             EEeeCCCH------HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccch
Q 039097           61 HQLDVADP------AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLG  134 (290)
Q Consensus        61 ~~~Dl~~~------~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~  134 (290)
                      +..|+++.      +..+.+.+       .+|+|||+|+....                       .+..+..+++|+.+
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----------------------~~~~~~a~~vNV~G  246 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----------------------DERYDVAIDINTRG  246 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----------------------ccCHHHHHHHHHHH
Confidence            99999987      23333333       58999999997631                       13467789999999


Q ss_pred             HHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097          135 AKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus       135 ~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      +.++++.+...   ....++|++||....
T Consensus       247 T~nLLelA~~~---~~lk~fV~vSTayVy  272 (605)
T PLN02503        247 PCHLMSFAKKC---KKLKLFLQVSTAYVN  272 (605)
T ss_pred             HHHHHHHHHHc---CCCCeEEEccCceee
Confidence            99999988432   123579999986543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.24  E-value=4.7e-10  Score=119.46  Aligned_cols=219  Identities=16%  Similarity=0.098  Sum_probs=131.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC----CeEEEEecCcccHHHHHHHHHh----c------CCCcEEEEEeeCCCHHH-
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNG----IITVLTARDEKGGLEAVEKLKH----S------GFDNVIFHQLDVADPAA-   70 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g----~~Vi~~~r~~~~~~~~~~~l~~----~------~~~~~~~~~~Dl~~~~~-   70 (290)
                      .++++||||+|.||..++++|++++    ++|+.+.|+...... .+.+..    .      ...++.++.+|+++..- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~-~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAG-LERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHH-HHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            5789999999999999999999987    788888887544222 222211    1      11368899999975410 


Q ss_pred             -HHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           71 -IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        71 -v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                       -.+.++++.   ..+|++||+|+.....                       ..+......|+.|+.++++.+.    +.
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~~-----------------------~~~~~~~~~nv~gt~~ll~~a~----~~ 1099 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHWV-----------------------YPYSKLRDANVIGTINVLNLCA----EG 1099 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecCc-----------------------cCHHHHHHhHHHHHHHHHHHHH----hC
Confidence             011122222   3689999999976311                       1133345679999999999884    33


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccC-CccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFS-DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                      +..+++++||.............+.... ........                .............|+.||.+.+.+++.
T Consensus      1100 ~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~----------------~~~~~~~~~~~~~Y~~sK~~aE~l~~~ 1163 (1389)
T TIGR03443      1100 KAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPES----------------DDLMGSSKGLGTGYGQSKWVAEYIIRE 1163 (1389)
T ss_pred             CCceEEEEeCeeecCcccccchhhhhhhccCCCCCcc----------------cccccccccCCCChHHHHHHHHHHHHH
Confidence            4568999999865432100000000000 00000000                000000011235699999999999987


Q ss_pred             HHhhCCCeEEEEeecceeecCcccCC---------------------------CCCChhhhccchhhhhhcc
Q 039097          229 LAKKYPNFCINCVCPGYVKTEMTYNA---------------------------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       229 la~e~~~i~vn~v~PG~v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~  273 (290)
                      .+.  .++.+..+.||.|..+-....                           .....+++++.++.++..+
T Consensus      1164 ~~~--~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~ 1233 (1389)
T TIGR03443      1164 AGK--RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNP 1233 (1389)
T ss_pred             HHh--CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCC
Confidence            554  389999999998876532210                           1235678888887776544

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.18  E-value=6.8e-10  Score=109.98  Aligned_cols=160  Identities=14%  Similarity=0.091  Sum_probs=101.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ..+++|||||+|.||++++++|.++|++|..                         ...|++|.+.+.+.+++.     +
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------~~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------GKGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------eccccccHHHHHHHHHhh-----C
Confidence            3457999999999999999999999988731                         124577888877776653     7


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+|+........                 ...++..+.+++|+.++.++++++.    +.+ .++|++||.... 
T Consensus       429 pd~Vih~Aa~~~~~~~~-----------------~~~~~~~~~~~~N~~gt~~l~~a~~----~~g-~~~v~~Ss~~v~-  485 (668)
T PLN02260        429 PTHVFNAAGVTGRPNVD-----------------WCESHKVETIRANVVGTLTLADVCR----ENG-LLMMNFATGCIF-  485 (668)
T ss_pred             CCEEEECCcccCCCCCC-----------------hHHhCHHHHHHHHhHHHHHHHHHHH----HcC-CeEEEEccccee-
Confidence            99999999986421110                 0234567889999999999999994    333 356666664322 


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      .+....        +.                ....+..+.+...+....|+.||.+.+.+++.++ +.-.+|+..+.
T Consensus       486 ~~~~~~--------~~----------------~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~-~~~~~r~~~~~  538 (668)
T PLN02260        486 EYDAKH--------PE----------------GSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYD-NVCTLRVRMPI  538 (668)
T ss_pred             cCCccc--------cc----------------ccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhh-hheEEEEEEec
Confidence            110000        00                0000000111111223689999999999998774 33356665544

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.18  E-value=2.7e-10  Score=101.00  Aligned_cols=76  Identities=12%  Similarity=0.067  Sum_probs=61.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC-cc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK-LD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-id   86 (290)
                      +++||||+|.||++++++|+++|++|.+++|++++...          ..+..+.+|+.|.+++.++++.. +.+.. +|
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d   69 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEIS   69 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------CCCccccccCCCHHHHHHHHhcc-cCcCCcee
Confidence            48999999999999999999999999999999875321          13566789999999999988653 22335 89


Q ss_pred             EEEEcccc
Q 039097           87 ILVNNAGI   94 (290)
Q Consensus        87 ~li~~Ag~   94 (290)
                      .++++++.
T Consensus        70 ~v~~~~~~   77 (285)
T TIGR03649        70 AVYLVAPP   77 (285)
T ss_pred             EEEEeCCC
Confidence            99998874

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.17  E-value=1.4e-10  Score=99.69  Aligned_cols=108  Identities=11%  Similarity=0.107  Sum_probs=78.2

Q ss_pred             EEEEecC-CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGA-NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGg-s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +=.||.. +||||+++|++|+++|++|+++++...        +..     .....+|+++.+++.++++.+.+.++++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~-----~~~~~~Dv~d~~s~~~l~~~v~~~~g~iD   82 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP-----EPHPNLSIREIETTKDLLITLKELVQEHD   82 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc-----ccCCcceeecHHHHHHHHHHHHHHcCCCC
Confidence            3345544 679999999999999999999876311        110     01245899999999999999999999999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ  147 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~  147 (290)
                      ++|||||+....+...                .+.++|+++   +..+.|++.+..-..++
T Consensus        83 iLVnnAgv~d~~~~~~----------------~s~e~~~~~---~~~~~~~~~~~~~~Ki~  124 (227)
T TIGR02114        83 ILIHSMAVSDYTPVYM----------------TDLEQVQAS---DNLNEFLSKQNHEAKIS  124 (227)
T ss_pred             EEEECCEeccccchhh----------------CCHHHHhhh---cchhhhhccccccCCcc
Confidence            9999999865444332                377888877   44566666664444333

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.17  E-value=1.4e-09  Score=96.02  Aligned_cols=182  Identities=17%  Similarity=0.192  Sum_probs=135.7

Q ss_pred             CcEEEEecC-CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGA-NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGg-s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ..+|+|.|. +.-|++.+|.-|-++|+-|+++..+.++.+..    ++.....+.....|..+..++...++++.+.+..
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~v----e~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~   78 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYV----ESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSR   78 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHH----HhccCCCCCCcccCCCCCcchHHHHHHHHHHhcC
Confidence            568999995 78999999999999999999999997654432    2222335778888888888877777777765442


Q ss_pred             --------------ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-
Q 039097           85 --------------LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-  149 (290)
Q Consensus        85 --------------id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-  149 (290)
                                    +..||.......+....               ...+.+.|.+.++.|++.++.+++.++|+++.+ 
T Consensus        79 p~~p~~~~~~h~l~L~svi~~Psl~yp~gPi---------------e~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~  143 (299)
T PF08643_consen   79 PHVPFPGAPPHHLQLKSVIFIPSLSYPTGPI---------------ETISPSSWADELNTRLLTPILTIQGLLPLLRSRS  143 (299)
T ss_pred             CCCCCCCCCCceeEEEEEEEecCCCCCCCCc---------------cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence                          33444444433322222               234889999999999999999999999999972 


Q ss_pred             -CCCeEEEEc-CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 039097          150 -DSARIVNVS-SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR  227 (290)
Q Consensus       150 -~~~~iV~is-S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~  227 (290)
                       ...+||.++ |.......                                           |.++.-.+...++.++++
T Consensus       144 ~~~~~iil~~Psi~ssl~~-------------------------------------------PfhspE~~~~~al~~~~~  180 (299)
T PF08643_consen  144 NQKSKIILFNPSISSSLNP-------------------------------------------PFHSPESIVSSALSSFFT  180 (299)
T ss_pred             CCCceEEEEeCchhhccCC-------------------------------------------CccCHHHHHHHHHHHHHH
Confidence             235555554 44333322                                           566788899999999999


Q ss_pred             HHHhhCC--CeEEEEeecceeecC
Q 039097          228 ILAKKYP--NFCINCVCPGYVKTE  249 (290)
Q Consensus       228 ~la~e~~--~i~vn~v~PG~v~T~  249 (290)
                      +|.+|+.  +|.|..+..|.++-.
T Consensus       181 ~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  181 SLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             HHHHHhhhcCCceEEEEeeeeccc
Confidence            9999994  899999999988766

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.12  E-value=3.8e-10  Score=97.09  Aligned_cols=168  Identities=17%  Similarity=0.128  Sum_probs=112.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++.+++||||+|.||+++|.+|..+|+.||++|.--...+.....+..  ...+..+.-|+...     ++.       
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~--~~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG--HPNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc--CcceeEEEeechhH-----HHH-------
Confidence            4578999999999999999999999999999999766555544443321  12455566665544     444       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      .+|.++|.|+...+..-.                    ..--+++.+|++++.+++..+.+     -++|++..|++..+
T Consensus        91 evD~IyhLAapasp~~y~--------------------~npvktIktN~igtln~lglakr-----v~aR~l~aSTseVY  145 (350)
T KOG1429|consen   91 EVDQIYHLAAPASPPHYK--------------------YNPVKTIKTNVIGTLNMLGLAKR-----VGARFLLASTSEVY  145 (350)
T ss_pred             HhhhhhhhccCCCCcccc--------------------cCccceeeecchhhHHHHHHHHH-----hCceEEEeeccccc
Confidence            479999999987653321                    12246789999999999988843     23788888887543


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEE
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI  238 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~v  238 (290)
                      .-...+             +..+..     |  .+.++.       .....|...|.+.+.|+..+.++. ||.|
T Consensus       146 gdp~~h-------------pq~e~y-----w--g~vnpi-------gpr~cydegKr~aE~L~~~y~k~~-giE~  192 (350)
T KOG1429|consen  146 GDPLVH-------------PQVETY-----W--GNVNPI-------GPRSCYDEGKRVAETLCYAYHKQE-GIEV  192 (350)
T ss_pred             CCcccC-------------CCcccc-----c--cccCcC-------CchhhhhHHHHHHHHHHHHhhccc-CcEE
Confidence            321111             110000     0  001111       245789999999999999888887 4433

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.11  E-value=6.7e-10  Score=95.58  Aligned_cols=186  Identities=18%  Similarity=0.164  Sum_probs=122.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |+...-|.++||||+|.||...+..++..  .++.+..+.-.- .....++++.  ...+..++..|+.+...+.-++..
T Consensus         1 ~~~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~--n~p~ykfv~~di~~~~~~~~~~~~   78 (331)
T KOG0747|consen    1 MATYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR--NSPNYKFVEGDIADADLVLYLFET   78 (331)
T ss_pred             CCCCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc--cCCCceEeeccccchHHHHhhhcc
Confidence            34445589999999999999999999987  456555543210 0022222222  223689999999999988887774


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                           .++|.|||.|+.....-                    +.-+--+..+.|++++..|++.+.-..   .-.++|++
T Consensus        79 -----~~id~vihfaa~t~vd~--------------------s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhv  130 (331)
T KOG0747|consen   79 -----EEIDTVIHFAAQTHVDR--------------------SFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHV  130 (331)
T ss_pred             -----CchhhhhhhHhhhhhhh--------------------hcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEe
Confidence                 48999999999874211                    222334567899999999999984322   34689999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                      |+-..+.....                               +-.......+-+...|+++|+|.+++.+++...+ ++.
T Consensus       131 STdeVYGds~~-------------------------------~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy-~lp  178 (331)
T KOG0747|consen  131 STDEVYGDSDE-------------------------------DAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY-GLP  178 (331)
T ss_pred             cccceecCccc-------------------------------cccccccccCCCCCchHHHHHHHHHHHHHHhhcc-CCc
Confidence            98765432210                               0000011112345789999999999999999999 444


Q ss_pred             EEEeecceeec
Q 039097          238 INCVCPGYVKT  248 (290)
Q Consensus       238 vn~v~PG~v~T  248 (290)
                      +..+.-+-|..
T Consensus       179 vv~~R~nnVYG  189 (331)
T KOG0747|consen  179 VVTTRMNNVYG  189 (331)
T ss_pred             EEEEeccCccC
Confidence            43333333333

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.10  E-value=9e-10  Score=90.95  Aligned_cols=85  Identities=20%  Similarity=0.134  Sum_probs=71.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++||||+ |+|.+++++|+++|++|++.+|++++.+.....+..  ..++.++.+|++|.+++.++++.+.++++++|.
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~   78 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT--PESITPLPLDYHDDDALKLAIKSTIEKNGPFDL   78 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeE
Confidence            68999998 677789999999999999999987766555444432  346888999999999999999999999999999


Q ss_pred             EEEccccC
Q 039097           88 LVNNAGIT   95 (290)
Q Consensus        88 li~~Ag~~   95 (290)
                      +|+.+-..
T Consensus        79 lv~~vh~~   86 (177)
T PRK08309         79 AVAWIHSS   86 (177)
T ss_pred             EEEecccc
Confidence            99887753

>PLN00016 RNA-binding protein; Provisional

Probab=99.08  E-value=4.9e-09  Score=96.94  Aligned_cols=78  Identities=22%  Similarity=0.292  Sum_probs=56.8

Q ss_pred             CCcEEEEe----cCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH-------HHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            5 AKRYAVVT----GANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-------VEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         5 ~~k~~lIT----Ggs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      +.++||||    ||+|.||+.++++|+++|++|++++|+.......       ..++..   ..+.++.+|+.|   +.+
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~---~~v~~v~~D~~d---~~~  124 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS---AGVKTVWGDPAD---VKS  124 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh---cCceEEEecHHH---HHh
Confidence            45789999    9999999999999999999999999987543211       112211   237888899876   333


Q ss_pred             HHHHHHhhcCCccEEEEccc
Q 039097           74 VADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag   93 (290)
                      ++.     ..++|+|||+++
T Consensus       125 ~~~-----~~~~d~Vi~~~~  139 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNG  139 (378)
T ss_pred             hhc-----cCCccEEEeCCC
Confidence            332     136999999876

>PRK12320 hypothetical protein; Provisional

Probab=98.96  E-value=4.4e-09  Score=103.08  Aligned_cols=104  Identities=22%  Similarity=0.252  Sum_probs=78.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|.||++++++|+++|++|++++|++...          ....+.++.+|+++.. +.+++       .++|+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~----------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~   63 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA----------LDPRVDYVCASLRNPV-LQELA-------GEADA   63 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc----------ccCCceEEEccCCCHH-HHHHh-------cCCCE
Confidence            699999999999999999999999999999874321          0124788999999873 43333       26899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |||+|+...                       + +    ...+|+.++.++++++    ++.+ .+||++||..|
T Consensus        64 VIHLAa~~~-----------------------~-~----~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G  105 (699)
T PRK12320         64 VIHLAPVDT-----------------------S-A----PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAG  105 (699)
T ss_pred             EEEcCccCc-----------------------c-c----hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCC
Confidence            999998631                       0 0    1247999999999988    3333 48999998754

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.93  E-value=2e-08  Score=86.48  Aligned_cols=185  Identities=17%  Similarity=0.159  Sum_probs=117.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      |+|+||+|.+|+.+++.|++.+++|.++.|+..+  +..++++..+   ++++.+|+.|.+++.++++       .+|.|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g---~~vv~~d~~~~~~l~~al~-------g~d~v   68 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALG---AEVVEADYDDPESLVAALK-------GVDAV   68 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTT---TEEEES-TT-HHHHHHHHT-------TCSEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhccc---ceEeecccCCHHHHHHHHc-------CCceE
Confidence            6899999999999999999999999999999833  3344444433   5678999999999988888       79999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT  168 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~  168 (290)
                      |++.+...                                ..-......+++++    ++.+-.++|. ||........ 
T Consensus        69 ~~~~~~~~--------------------------------~~~~~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~-  110 (233)
T PF05368_consen   69 FSVTPPSH--------------------------------PSELEQQKNLIDAA----KAAGVKHFVP-SSFGADYDES-  110 (233)
T ss_dssp             EEESSCSC--------------------------------CCHHHHHHHHHHHH----HHHT-SEEEE-SEESSGTTTT-
T ss_pred             EeecCcch--------------------------------hhhhhhhhhHHHhh----hccccceEEE-EEeccccccc-
Confidence            99988642                                01112233455555    4345678885 4443322100 


Q ss_pred             hhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeec
Q 039097          169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKT  248 (290)
Q Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T  248 (290)
                                                            ..+.+....-..|+.++...+..     ++....+.||+...
T Consensus       111 --------------------------------------~~~~p~~~~~~~k~~ie~~l~~~-----~i~~t~i~~g~f~e  147 (233)
T PF05368_consen  111 --------------------------------------SGSEPEIPHFDQKAEIEEYLRES-----GIPYTIIRPGFFME  147 (233)
T ss_dssp             --------------------------------------TTSTTHHHHHHHHHHHHHHHHHC-----TSEBEEEEE-EEHH
T ss_pred             --------------------------------------ccccccchhhhhhhhhhhhhhhc-----cccceeccccchhh
Confidence                                                  00011122334677777766544     66666666665433


Q ss_pred             CcccC-----------------------CCCC-ChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          249 EMTYN-----------------------AGRL-TVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       249 ~~~~~-----------------------~~~~-~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .....                       .... +.+|+++.++..+..|.....|+.+...+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~  209 (233)
T PF05368_consen  148 NLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG  209 (233)
T ss_dssp             HHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG
T ss_pred             hhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC
Confidence            32111                       0123 77999999999999988665677766654

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.90  E-value=1.7e-08  Score=95.39  Aligned_cols=152  Identities=13%  Similarity=0.030  Sum_probs=105.4

Q ss_pred             EecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEEEE
Q 039097           11 VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVN   90 (290)
Q Consensus        11 ITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~li~   90 (290)
                      |+||++|+|.++++.|...|+.|+.+.+.+.+...                                  ....+++.+++
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~----------------------------------~~~~~~~~~~~   88 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA----------------------------------GWGDRFGALVF   88 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccccc----------------------------------CcCCcccEEEE
Confidence            88889999999999999999999987665431100                                  00013443333


Q ss_pred             ccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchh
Q 039097           91 NAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHE  170 (290)
Q Consensus        91 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~  170 (290)
                      -+-..                       .+.+++        .+.+.+++..++.|.  .+|+||+++|..+...     
T Consensus        89 d~~~~-----------------------~~~~~l--------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~~-----  130 (450)
T PRK08261         89 DATGI-----------------------TDPADL--------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAAA-----  130 (450)
T ss_pred             ECCCC-----------------------CCHHHH--------HHHHHHHHHHHHhcc--CCCEEEEEccccccCC-----
Confidence            22111                       022222        233456777777775  4589999998765421     


Q ss_pred             hhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEeecceeecC
Q 039097          171 WAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYVKTE  249 (290)
Q Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v~PG~v~T~  249 (290)
                                                               ...|+++|+++.+++|+++.|+ .++++|.|.|++    
T Consensus       131 -----------------------------------------~~~~~~akaal~gl~rsla~E~~~gi~v~~i~~~~----  165 (450)
T PRK08261        131 -----------------------------------------DPAAAAAQRALEGFTRSLGKELRRGATAQLVYVAP----  165 (450)
T ss_pred             -----------------------------------------chHHHHHHHHHHHHHHHHHHHhhcCCEEEEEecCC----
Confidence                                                     2569999999999999999999 479999999986    


Q ss_pred             cccCCCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          250 MTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       250 ~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                             ..++++++.+.++.+......+|+.+...+
T Consensus       166 -------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~  195 (450)
T PRK08261        166 -------GAEAGLESTLRFFLSPRSAYVSGQVVRVGA  195 (450)
T ss_pred             -------CCHHHHHHHHHHhcCCccCCccCcEEEecC
Confidence                   356777878888877666667777766544

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.88  E-value=1.2e-08  Score=87.98  Aligned_cols=185  Identities=14%  Similarity=0.134  Sum_probs=106.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      ++||||+|-||++++.+|.+.|+.|++++|++.+.......           .   +...+.+.+..+.      .+|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----------~---v~~~~~~~~~~~~------~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----------N---VTLWEGLADALTL------GIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----------c---ccccchhhhcccC------CCCEE
Confidence            58999999999999999999999999999998775542210           0   1111222222221      69999


Q ss_pred             EEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC-CeEEEEcCCCCccccc
Q 039097           89 VNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSLGKLMYV  167 (290)
Q Consensus        89 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~-~~iV~isS~~g~~~~~  167 (290)
                      ||.||.......+                  +.+.=+..++.-+..+-.+.+.+    .+... +++..-+|..|+++..
T Consensus        61 INLAG~~I~~rrW------------------t~~~K~~i~~SRi~~T~~L~e~I----~~~~~~P~~~isaSAvGyYG~~  118 (297)
T COG1090          61 INLAGEPIAERRW------------------TEKQKEEIRQSRINTTEKLVELI----AASETKPKVLISASAVGYYGHS  118 (297)
T ss_pred             EECCCCccccccC------------------CHHHHHHHHHHHhHHHHHHHHHH----HhccCCCcEEEecceEEEecCC
Confidence            9999975433222                  33444444544444444444444    53332 3333334444665542


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh-----CCCeEEEEee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK-----YPNFCINCVC  242 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e-----~~~i~vn~v~  242 (290)
                      .+..                          +.+.+      |++.       -.+..+++.+-.+     ..++||..+.
T Consensus       119 ~~~~--------------------------~tE~~------~~g~-------~Fla~lc~~WE~~a~~a~~~gtRvvllR  159 (297)
T COG1090         119 GDRV--------------------------VTEES------PPGD-------DFLAQLCQDWEEEALQAQQLGTRVVLLR  159 (297)
T ss_pred             Ccee--------------------------eecCC------CCCC-------ChHHHHHHHHHHHHhhhhhcCceEEEEE
Confidence            1100                          00001      1111       1334444444333     2589999888


Q ss_pred             cceeecCcccCC----------------------CCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYNA----------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      -|.|..+-....                      +....||..+.+.|++.+..
T Consensus       160 tGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~  213 (297)
T COG1090         160 TGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ  213 (297)
T ss_pred             EEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence            888877532221                      23588999999999988755

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.85  E-value=4.2e-08  Score=84.72  Aligned_cols=123  Identities=23%  Similarity=0.266  Sum_probs=96.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +.+|-++-|.||+|.+|+-++.+|++.|..||+-.|-.+....   +++..+ -.++.+...|+.|+++++++++     
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r---~lkvmGdLGQvl~~~fd~~DedSIr~vvk-----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPR---HLKVMGDLGQVLFMKFDLRDEDSIRAVVK-----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchh---heeecccccceeeeccCCCCHHHHHHHHH-----
Confidence            5678899999999999999999999999999999986544222   232222 1379999999999999999998     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .-++|||..|.-.....                        -+..++|+.++-.+.+.+    ++.+--++|.+|+..
T Consensus       130 --~sNVVINLIGrd~eTkn------------------------f~f~Dvn~~~aerlAric----ke~GVerfIhvS~Lg  179 (391)
T KOG2865|consen  130 --HSNVVINLIGRDYETKN------------------------FSFEDVNVHIAERLARIC----KEAGVERFIHVSCLG  179 (391)
T ss_pred             --hCcEEEEeeccccccCC------------------------cccccccchHHHHHHHHH----HhhChhheeehhhcc
Confidence              46999999996432221                        124678999999999888    555556999999887


Q ss_pred             Cc
Q 039097          162 GK  163 (290)
Q Consensus       162 g~  163 (290)
                      +.
T Consensus       180 an  181 (391)
T KOG2865|consen  180 AN  181 (391)
T ss_pred             cc
Confidence            54

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.82  E-value=1.3e-08  Score=94.24  Aligned_cols=82  Identities=16%  Similarity=0.209  Sum_probs=64.0

Q ss_pred             cCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC
Q 039097            3 ETAKRYAVVTGA----------------NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA   66 (290)
Q Consensus         3 ~~~~k~~lITGg----------------s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~   66 (290)
                      +++||++|||||                +|++|+++|++|+++|++|++++++.. .+     .    .  ..+..+|++
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~----~--~~~~~~dv~  252 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----T----P--AGVKRIDVE  252 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----C----C--CCcEEEccC
Confidence            478999999999                555999999999999999999998752 11     0    0  123568999


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCC
Q 039097           67 DPAAIHSVADFIRSHFGKLDILVNNAGITGISS   99 (290)
Q Consensus        67 ~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~   99 (290)
                      +.+++.+.++   +.++++|++|||||+....+
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEccccccccc
Confidence            9888777665   45789999999999865443

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.77  E-value=7.8e-08  Score=89.50  Aligned_cols=187  Identities=23%  Similarity=0.330  Sum_probs=117.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--C-eEEEEecCcc--cHHHHH---------HHHHhcCC---CcEEEEEeeCC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG--I-ITVLTARDEK--GGLEAV---------EKLKHSGF---DNVIFHQLDVA   66 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g--~-~Vi~~~r~~~--~~~~~~---------~~l~~~~~---~~~~~~~~Dl~   66 (290)
                      +++|+++||||+|++|.-+++.|++.-  . ++.++-|...  +..+.+         +.+++..+   +++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            579999999999999999999999874  2 5666665432  122222         22233322   47888889987


Q ss_pred             CHH------HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHH
Q 039097           67 DPA------AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCE  140 (290)
Q Consensus        67 ~~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~  140 (290)
                      +++      +.+.+++       .+|++||+|+...                       -.|-.+-.+.+|..|+.++++
T Consensus        90 ~~~LGis~~D~~~l~~-------eV~ivih~AAtvr-----------------------Fde~l~~al~iNt~Gt~~~l~  139 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD-------EVNIVIHSAATVR-----------------------FDEPLDVALGINTRGTRNVLQ  139 (467)
T ss_pred             CcccCCChHHHHHHHh-------cCCEEEEeeeeec-----------------------cchhhhhhhhhhhHhHHHHHH
Confidence            653      3332222       7999999999763                       235566789999999999999


Q ss_pred             HhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHH--------HHHHHHHHHHhhhcCCCCCCCCCCCCc
Q 039097          141 ALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE--------RVDEVLSQYLNDYKEGSPETKGWPANA  212 (290)
Q Consensus       141 ~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (290)
                      .+.....   -...|++|+..+.. .... ..-..|..+...+..        -.+....+..+....      ++|   
T Consensus       140 lak~~~~---l~~~vhVSTAy~n~-~~~~-i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~------~~P---  205 (467)
T KOG1221|consen  140 LAKEMVK---LKALVHVSTAYSNC-NVGH-IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLG------GWP---  205 (467)
T ss_pred             HHHHhhh---hheEEEeehhheec-cccc-ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcC------CCC---
Confidence            9966543   35799999876652 1111 111122222222222        222233333333322      222   


Q ss_pred             hhhhhhHHHHHHHHHHHHhhCC
Q 039097          213 AAYILSKAAMNAYTRILAKKYP  234 (290)
Q Consensus       213 ~~Y~~sKaa~~~~~~~la~e~~  234 (290)
                      -.|.-+|+-.+++...-+..+|
T Consensus       206 NTYtfTKal~E~~i~~~~~~lP  227 (467)
T KOG1221|consen  206 NTYTFTKALAEMVIQKEAENLP  227 (467)
T ss_pred             CceeehHhhHHHHHHhhccCCC
Confidence            4699999999999987777663

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.74  E-value=5.5e-08  Score=86.64  Aligned_cols=85  Identities=22%  Similarity=0.274  Sum_probs=65.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCc---ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDE---KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      .++++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.++..+++..... .+.+..+|+.+.+++.+.++ 
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~-  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVP-ECIVNVYDLNDTEKLKAEIA-  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCC-CceeEEechhhhhHHHhhhc-
Confidence            3567899999999 69999999999999996 99999997   566666666644332 35566789888777665544 


Q ss_pred             HHhhcCCccEEEEccccC
Q 039097           78 IRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~   95 (290)
                            ..|+||||..+.
T Consensus       199 ------~~DilINaTp~G  210 (289)
T PRK12548        199 ------SSDILVNATLVG  210 (289)
T ss_pred             ------cCCEEEEeCCCC
Confidence                  469999988653

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.70  E-value=6.3e-07  Score=84.69  Aligned_cols=208  Identities=18%  Similarity=0.108  Sum_probs=132.9

Q ss_pred             CCCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGAN-KGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         4 ~~~k~~lITGgs-~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ..++++|||||+ +.||.+++.+|+..|++||++..+ ..+..+..+.|-..   ++..++++.++..+..+++.+++.+
T Consensus       394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewI  473 (866)
T COG4982         394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWI  473 (866)
T ss_pred             cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHh
Confidence            568999999999 689999999999999999998654 44455666666433   3457899999999999999999999


Q ss_pred             HhhcC--------------CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhch
Q 039097           79 RSHFG--------------KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        79 ~~~~~--------------~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~  144 (290)
                      -++..              .++++|-.|++-........              ....|.-.+++-.|+.-.+-.++.+. 
T Consensus       474 g~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~a--------------gsraE~~~rilLw~V~Rliggl~~~~-  538 (866)
T COG4982         474 GDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADA--------------GSRAEFAMRILLWNVLRLIGGLKKQG-  538 (866)
T ss_pred             ccccccccCCcceecccccCcceeeecccCCccCccccC--------------CchHHHHHHHHHHHHHHHHHHhhhhc-
Confidence            87533              36788888876543322211              00122233344444443333333321 


Q ss_pred             hhccCC---CCeEEEEcCCC-CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHH
Q 039097          145 LLQLSD---SARIVNVSSSL-GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKA  220 (290)
Q Consensus       145 ~l~~~~---~~~iV~isS~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKa  220 (290)
                        ..++   .-++|.-.|.. |.+                                             .+-.+|+-+|+
T Consensus       539 --s~r~v~~R~hVVLPgSPNrG~F---------------------------------------------GgDGaYgEsK~  571 (866)
T COG4982         539 --SSRGVDTRLHVVLPGSPNRGMF---------------------------------------------GGDGAYGESKL  571 (866)
T ss_pred             --cccCcccceEEEecCCCCCCcc---------------------------------------------CCCcchhhHHH
Confidence              1111   13455544432 222                                             45689999999


Q ss_pred             HHHHHHHHHHhhC--C-CeEEEEeecceee-cCcccCCC------------CCChhhhccchhhhhhcc
Q 039097          221 AMNAYTRILAKKY--P-NFCINCVCPGYVK-TEMTYNAG------------RLTVEEGAESPVWLALLH  273 (290)
Q Consensus       221 a~~~~~~~la~e~--~-~i~vn~v~PG~v~-T~~~~~~~------------~~~~e~~a~~~~~l~~~~  273 (290)
                      +++.+..-+-.|-  + -+.+..-.-||+. |.++..+.            ..++++.|..++.+++..
T Consensus       572 aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~GV~tyS~~EmA~~LLgL~sae  640 (866)
T COG4982         572 ALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKAGVRTYSTDEMAFNLLGLASAE  640 (866)
T ss_pred             HHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHhCceecCHHHHHHHHHhhccHH
Confidence            9999887666554  2 3444445567774 44444432            347888888888776643

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.69  E-value=2.9e-07  Score=80.60  Aligned_cols=177  Identities=21%  Similarity=0.141  Sum_probs=121.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +.+|||||+|.+|.+++++|+++|+.|.+..|++++.....        ..+.+...|+.+..++...++       .+|
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            36899999999999999999999999999999988766544        358899999999999998888       689


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      .+++..+... ...                         ........+.....+...     ....+++.+|+..+..  
T Consensus        66 ~~~~i~~~~~-~~~-------------------------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--  112 (275)
T COG0702          66 GVLLISGLLD-GSD-------------------------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--  112 (275)
T ss_pred             EEEEEecccc-ccc-------------------------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--
Confidence            9998888653 211                         123344455555555552     2345788888776543  


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce-
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY-  245 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~-  245 (290)
                                                                 .....|..+|...+...++....+..++=+.+..|+ 
T Consensus       113 -------------------------------------------~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~  149 (275)
T COG0702         113 -------------------------------------------ASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAG  149 (275)
T ss_pred             -------------------------------------------CCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccc
Confidence                                                       123689999999999998777766333322222211 


Q ss_pred             ---e---------ecCccc-CCCCCChhhhccchhhhhhccC
Q 039097          246 ---V---------KTEMTY-NAGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       246 ---v---------~T~~~~-~~~~~~~e~~a~~~~~l~~~~~  274 (290)
                         +         ..+... ...+...++++......+..+.
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~  191 (275)
T COG0702         150 AAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA  191 (275)
T ss_pred             hhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc
Confidence               1         111111 1235567777777777766554

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.64  E-value=2.5e-07  Score=77.58  Aligned_cols=83  Identities=22%  Similarity=0.217  Sum_probs=67.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++++++|+||+|++|+++++.|+++|++|++++|+.+++++..+.+....+  .....+|+.+.+++.+.++      
T Consensus        25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFG--EGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcC--CcEEEeeCCCHHHHHHHHh------
Confidence            57889999999999999999999999999999999998887777776653332  3455678889888877775      


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                       +.|++|++...
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             57988887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.55  E-value=4.3e-07  Score=78.13  Aligned_cols=99  Identities=9%  Similarity=0.122  Sum_probs=63.1

Q ss_pred             EEEEecCCC-chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANK-GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~-gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +-.||..|+ +||+++|++|+++|++|++++|+....        ......+.++.++     +..++.+.+.+.++.+|
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~D   83 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PEPHPNLSIIEIE-----NVDDLLETLEPLVKDHD   83 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CCCCCCeEEEEEe-----cHHHHHHHHHHHhcCCC
Confidence            445665565 599999999999999999998764210        0011235555532     23333344444456799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchH
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGA  135 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~  135 (290)
                      ++|||||+....+..                ..+.+++.+++++|.+..
T Consensus        84 ivIh~AAvsd~~~~~----------------~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         84 VLIHSMAVSDYTPVY----------------MTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEEeCCccCCceehh----------------hhhhhhhhhhhhhhhhhc
Confidence            999999986433322                226788888888765544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.51  E-value=3.1e-07  Score=84.82  Aligned_cols=113  Identities=11%  Similarity=0.132  Sum_probs=77.3

Q ss_pred             cCCCcEEEEecC---------------CCc-hhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC
Q 039097            3 ETAKRYAVVTGA---------------NKG-IGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA   66 (290)
Q Consensus         3 ~~~~k~~lITGg---------------s~g-IG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~   66 (290)
                      +++||++|||||               |+| +|.++|++|..+|++|+++.+.....          .+.  ....+|++
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~~~--~~~~~~v~  249 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------TPP--GVKSIKVS  249 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------CCC--CcEEEEec
Confidence            478999999999               566 99999999999999999988765321          011  22568999


Q ss_pred             CHHHH-HHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhch
Q 039097           67 DPAAI-HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        67 ~~~~v-~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~  144 (290)
                      +.+++ +++++++   ++++|++|+|||+....+....      ...+      +.  ..+.+..|+.-.--+++.+..
T Consensus       250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~------~~Ki------~~--~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       250 TAEEMLEAALNEL---AKDFDIFISAAAVADFKPKTVF------EGKI------KK--QGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             cHHHHHHHHHHhh---cccCCEEEEccccccccccccc------cccc------cc--cCCceeEEEEeCcHHHHHHHh
Confidence            99888 5555443   4689999999999754432211      0000      00  113456777777777777753

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.39  E-value=2.7e-06  Score=80.44  Aligned_cols=77  Identities=22%  Similarity=0.288  Sum_probs=59.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++.+++. +..++..+++...   .+.++..|..+.            .
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~------------~   65 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL---GIELVLGEYPEE------------F   65 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCEEEeCCcchh------------H
Confidence            78899999999888 99999999999999999999975 3344444555332   256777787761            1


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      .+++|+||+++|+.
T Consensus        66 ~~~~d~vv~~~g~~   79 (450)
T PRK14106         66 LEGVDLVVVSPGVP   79 (450)
T ss_pred             hhcCCEEEECCCCC
Confidence            24799999999975

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.27  E-value=2.4e-06  Score=72.62  Aligned_cols=115  Identities=17%  Similarity=0.185  Sum_probs=88.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH-HHHHHHhc----CCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE-AVEKLKHS----GFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~-~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|++||||-+|-=|+-+|+.|+.+|++|..+-|+...... .++.+-..    .+.....+..|++|...+.+++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            4699999999999999999999999999988877665443 34444221    2346788999999999999999987  


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchh
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL  145 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~  145 (290)
                         +++-+.|.|+..+..-                    +-+-.+-+-++...|+++++.++...
T Consensus       106 ---kPtEiYnLaAQSHVkv--------------------SFdlpeYTAeVdavGtLRlLdAi~~c  147 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSHVKV--------------------SFDLPEYTAEVDAVGTLRLLDAIRAC  147 (376)
T ss_pred             ---CchhhhhhhhhcceEE--------------------EeecccceeeccchhhhhHHHHHHhc
Confidence               7888888888764321                    33334556778899999999988543

>PRK09620 hypothetical protein; Provisional

Probab=98.22  E-value=2.1e-06  Score=73.81  Aligned_cols=85  Identities=12%  Similarity=0.063  Sum_probs=52.8

Q ss_pred             CCCcEEEEecCC----------------CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC
Q 039097            4 TAKRYAVVTGAN----------------KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD   67 (290)
Q Consensus         4 ~~~k~~lITGgs----------------~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~   67 (290)
                      |+||+||||+|.                |.+|+++|++|+++|+.|+++++........   +.  ....+..+..    
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~---~~--~~~~~~~V~s----   71 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPND---IN--NQLELHPFEG----   71 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcc---cC--CceeEEEEec----
Confidence            579999999886                9999999999999999999887642211110   00  0011222333    


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCC
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAGITGIS   98 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~   98 (290)
                      ..++.+.++++..+ .++|++||.|++....
T Consensus        72 ~~d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         72 IIDLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHHHHhcc-cCCCEEEECcccccee
Confidence            22222233333221 2689999999996443

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.20  E-value=6.1e-06  Score=75.65  Aligned_cols=77  Identities=27%  Similarity=0.288  Sum_probs=66.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +.+||.|+ |+||+.+|..|+++| .+|++++|+.++..+..+..    ..++..+++|+.+.+.+.+++++       .
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----~~~v~~~~vD~~d~~al~~li~~-------~   69 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----GGKVEALQVDAADVDALVALIKD-------F   69 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----cccceeEEecccChHHHHHHHhc-------C
Confidence            56888898 999999999999999 89999999988776655543    23799999999999999999884       4


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |+||+++...
T Consensus        70 d~VIn~~p~~   79 (389)
T COG1748          70 DLVINAAPPF   79 (389)
T ss_pred             CEEEEeCCch
Confidence            9999999875

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.18  E-value=1.8e-05  Score=66.56  Aligned_cols=166  Identities=16%  Similarity=0.181  Sum_probs=100.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++++||||+|=+|+||.+.+..+|.   +.++.+.                      -.+|+++.+++++++++.     
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------------kd~DLt~~a~t~~lF~~e-----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------------KDADLTNLADTRALFESE-----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------------ccccccchHHHHHHHhcc-----
Confidence            6899999999999999999998875   2222111                      138999999999999974     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++-+|||.|+..+.-...-.+               ..+    .+..|+.-.-++++.+..+    +..++|+..|. +.
T Consensus        55 kPthVIhlAAmVGGlf~N~~y---------------nld----F~r~Nl~indNVlhsa~e~----gv~K~vsclSt-CI  110 (315)
T KOG1431|consen   55 KPTHVIHLAAMVGGLFHNNTY---------------NLD----FIRKNLQINDNVLHSAHEH----GVKKVVSCLST-CI  110 (315)
T ss_pred             CCceeeehHhhhcchhhcCCC---------------chH----HHhhcceechhHHHHHHHh----chhhhhhhcce-ee
Confidence            889999999876432211111               333    3455555555666666432    33445554443 23


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ++..+..               -+++.+-      .++.++     +.+..|+.+|..+.-..+.++.++ |-...++.|
T Consensus       111 fPdkt~y---------------PIdEtmv------h~gpph-----psN~gYsyAKr~idv~n~aY~~qh-g~~~tsviP  163 (315)
T KOG1431|consen  111 FPDKTSY---------------PIDETMV------HNGPPH-----PSNFGYSYAKRMIDVQNQAYRQQH-GRDYTSVIP  163 (315)
T ss_pred             cCCCCCC---------------CCCHHHh------ccCCCC-----CCchHHHHHHHHHHHHHHHHHHHh-CCceeeecc
Confidence            3221110               0000000      111111     456889999988887778888887 444556666


Q ss_pred             ceeecCc
Q 039097          244 GYVKTEM  250 (290)
Q Consensus       244 G~v~T~~  250 (290)
                      -.+..|-
T Consensus       164 tNvfGph  170 (315)
T KOG1431|consen  164 TNVFGPH  170 (315)
T ss_pred             ccccCCC
Confidence            5555554

>PLN00106 malate dehydrogenase

Probab=98.17  E-value=1.3e-05  Score=72.25  Aligned_cols=160  Identities=14%  Similarity=0.114  Sum_probs=99.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++|.|||++|.||..+|..|+.++.  .+++.|+++..  ....++.+...   .....++++.+++.+.+.       
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~--g~a~Dl~~~~~---~~~i~~~~~~~d~~~~l~-------   85 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP--GVAADVSHINT---PAQVRGFLGDDQLGDALK-------   85 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC--eeEchhhhCCc---CceEEEEeCCCCHHHHcC-------
Confidence            46899999999999999999998775  79999998721  11123322221   112235444444444444       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ..|++|+.||.-..                      +...+.+.+..|+-....+.+.+    ++.....||+++|.-.-
T Consensus        86 ~aDiVVitAG~~~~----------------------~g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD  139 (323)
T PLN00106         86 GADLVIIPAGVPRK----------------------PGMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVN  139 (323)
T ss_pred             CCCEEEEeCCCCCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCcc
Confidence            78999999997421                      12446778888888777777666    54455566666665332


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ..                      .+.+.......       .++ ++...|++++.-...|-..+|.++
T Consensus       140 ~~----------------------~~i~t~~~~~~-------s~~-p~~~viG~~~LDs~Rl~~~lA~~l  179 (323)
T PLN00106        140 ST----------------------VPIAAEVLKKA-------GVY-DPKKLFGVTTLDVVRANTFVAEKK  179 (323)
T ss_pred             cc----------------------HHHHHHHHHHc-------CCC-CcceEEEEecchHHHHHHHHHHHh
Confidence            00                      00111111111       011 345679999877778889999888

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.17  E-value=7.4e-06  Score=75.97  Aligned_cols=76  Identities=30%  Similarity=0.379  Sum_probs=60.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-C-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            9 AVVTGANKGIGYEVVRQLALNG-I-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g-~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+|.|| |.+|+.+++.|++++ . +|++.+|+.+++++..+++   ...++..+++|+.|.+++.++++       +.|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~l~~~~~-------~~d   69 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---LGDRVEAVQVDVNDPESLAELLR-------GCD   69 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----TTTTEEEEE--TTTHHHHHHHHT-------TSS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---cccceeEEEEecCCHHHHHHHHh-------cCC
Confidence            689999 999999999999997 4 8999999998888776655   34579999999999999988888       469


Q ss_pred             EEEEccccC
Q 039097           87 ILVNNAGIT   95 (290)
Q Consensus        87 ~li~~Ag~~   95 (290)
                      +|||++|..
T Consensus        70 vVin~~gp~   78 (386)
T PF03435_consen   70 VVINCAGPF   78 (386)
T ss_dssp             EEEE-SSGG
T ss_pred             EEEECCccc
Confidence            999999965

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.16  E-value=1.6e-05  Score=80.07  Aligned_cols=170  Identities=18%  Similarity=0.187  Sum_probs=125.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCccc---HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKG---GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .|..+|+||-||+|.++|+.|.++|+ ++++++|+--+   ....+..+...+ -++.+-.-|++..+..++++++..+ 
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~G-VqV~vsT~nitt~~ga~~Li~~s~k- 1845 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRG-VQVQVSTSNITTAEGARGLIEESNK- 1845 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcC-eEEEEecccchhhhhHHHHHHHhhh-
Confidence            57899999999999999999999999 58888887432   122334444433 3566667889998888888887654 


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      .+.+-.++|.|.+.-..-.                ..+++++|.++-+.-+.++.++-+.--..-.  .-.-+|..||.+
T Consensus      1846 l~~vGGiFnLA~VLRD~Li----------------EnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvs 1907 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLI----------------ENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVS 1907 (2376)
T ss_pred             cccccchhhHHHHHHhhhh----------------cccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeec
Confidence            4789999999988643322                2348999999999999999987665522111  225788888888


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh-CCCeEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK-YPNFCI  238 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e-~~~i~v  238 (290)
                      +-++.                                           .++.-|+.+..+++.++.-=..+ +||+.|
T Consensus      1908 cGRGN-------------------------------------------~GQtNYG~aNS~MERiceqRr~~GfPG~Ai 1942 (2376)
T KOG1202|consen 1908 CGRGN-------------------------------------------AGQTNYGLANSAMERICEQRRHEGFPGTAI 1942 (2376)
T ss_pred             ccCCC-------------------------------------------CcccccchhhHHHHHHHHHhhhcCCCccee
Confidence            76664                                           57789999999999999643333 277665

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.16  E-value=5.4e-06  Score=70.01  Aligned_cols=170  Identities=16%  Similarity=0.204  Sum_probs=111.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +-.++||||+-|-+|..+|+.|-.+ |- .||+.+.......     ...    .--++..|+.|..++++++-.     
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~-----V~~----~GPyIy~DILD~K~L~eIVVn-----  108 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPAN-----VTD----VGPYIYLDILDQKSLEEIVVN-----  108 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchh-----hcc----cCCchhhhhhccccHHHhhcc-----
Confidence            3468999999999999999998876 65 6877775543311     111    123567899999888877543     


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      .+||-+||-.+.....                     ...+.--..++|+.|.-++++....      ..--||+-|..|
T Consensus       109 ~RIdWL~HfSALLSAv---------------------GE~NVpLA~~VNI~GvHNil~vAa~------~kL~iFVPSTIG  161 (366)
T KOG2774|consen  109 KRIDWLVHFSALLSAV---------------------GETNVPLALQVNIRGVHNILQVAAK------HKLKVFVPSTIG  161 (366)
T ss_pred             cccceeeeHHHHHHHh---------------------cccCCceeeeecchhhhHHHHHHHH------cCeeEeeccccc
Confidence            4899999988765321                     2233344689999999999998843      244567777666


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe-
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV-  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v-  241 (290)
                      .++..          +|++                   |.+. -+...+...|+.||.-.+.+-+.+..++ ++.+.++ 
T Consensus       162 AFGPt----------SPRN-------------------PTPd-ltIQRPRTIYGVSKVHAEL~GEy~~hrF-g~dfr~~r  210 (366)
T KOG2774|consen  162 AFGPT----------SPRN-------------------PTPD-LTIQRPRTIYGVSKVHAELLGEYFNHRF-GVDFRSMR  210 (366)
T ss_pred             ccCCC----------CCCC-------------------CCCC-eeeecCceeechhHHHHHHHHHHHHhhc-Cccceecc
Confidence            66541          1211                   1110 0111345899999999998888887777 3333232 


Q ss_pred             eccee
Q 039097          242 CPGYV  246 (290)
Q Consensus       242 ~PG~v  246 (290)
                      .||.+
T Consensus       211 fPg~i  215 (366)
T KOG2774|consen  211 FPGII  215 (366)
T ss_pred             cCccc
Confidence            35544

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.11  E-value=9.7e-05  Score=60.31  Aligned_cols=184  Identities=15%  Similarity=0.075  Sum_probs=115.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++.|.||||.+|..|++....+|+.|..+.|++.+....         ..+.+++.|+.|..++.+.+.       ..|+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------~~~~i~q~Difd~~~~a~~l~-------g~Da   65 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------QGVTILQKDIFDLTSLASDLA-------GHDA   65 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------ccceeecccccChhhhHhhhc-------CCce
Confidence            678999999999999999999999999999998875542         137789999999999866666       7899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      ||..-|...+.                     ..+...+.           .+.++..++.....|++.++.........
T Consensus        66 VIsA~~~~~~~---------------------~~~~~~k~-----------~~~li~~l~~agv~RllVVGGAGSL~id~  113 (211)
T COG2910          66 VISAFGAGASD---------------------NDELHSKS-----------IEALIEALKGAGVPRLLVVGGAGSLEIDE  113 (211)
T ss_pred             EEEeccCCCCC---------------------hhHHHHHH-----------HHHHHHHHhhcCCeeEEEEcCccceEEcC
Confidence            99988865211                     11111111           34444444665678999998765544221


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .    ..+...|                           .+  +...|..+++.-+. ...|..+-. +...=|+|-...
T Consensus       114 g----~rLvD~p---------------------------~f--P~ey~~~A~~~ae~-L~~Lr~~~~-l~WTfvSPaa~f  158 (211)
T COG2910         114 G----TRLVDTP---------------------------DF--PAEYKPEALAQAEF-LDSLRAEKS-LDWTFVSPAAFF  158 (211)
T ss_pred             C----ceeecCC---------------------------CC--chhHHHHHHHHHHH-HHHHhhccC-cceEEeCcHHhc
Confidence            1    0111111                           11  22334445544443 344555543 666667776666


Q ss_pred             cCcccCC----------------CCCChhhhccchhhhhhccC
Q 039097          248 TEMTYNA----------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       248 T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      -|.-+..                ...+.+|.|-.++.-+..+.
T Consensus       159 ~PGerTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~  201 (211)
T COG2910         159 EPGERTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ  201 (211)
T ss_pred             CCccccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc
Confidence            5543331                24577777777776655544

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.09  E-value=9.3e-06  Score=64.03  Aligned_cols=78  Identities=21%  Similarity=0.248  Sum_probs=58.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++++++|.|+ ||.|++++..|+..|++ |.++.|+.+++++..+++   .+..+.++.  +.+   +.+...    
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~---~~~~~~~~~--~~~---~~~~~~----   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF---GGVNIEAIP--LED---LEEALQ----   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH---TGCSEEEEE--GGG---HCHHHH----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc---Cccccceee--HHH---HHHHHh----
Confidence            4688999999997 99999999999999996 999999999888887777   212233333  333   223333    


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                         +.|++|++.+..
T Consensus        75 ---~~DivI~aT~~~   86 (135)
T PF01488_consen   75 ---EADIVINATPSG   86 (135)
T ss_dssp             ---TESEEEE-SSTT
T ss_pred             ---hCCeEEEecCCC
Confidence               689999998864

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.06  E-value=2.5e-05  Score=70.41  Aligned_cols=121  Identities=19%  Similarity=0.086  Sum_probs=80.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++-+++.|+|++|.||..+|..|+.++  ..+++.|++.  .+....++.+...   .....++++..++.+.++     
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~---~~~v~~~td~~~~~~~l~-----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDT---PAKVTGYADGELWEKALR-----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCc---CceEEEecCCCchHHHhC-----
Confidence            445689999999999999999999766  4799999932  2222223333222   223446666554434444     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ..|+||++||....                      +.+.+.+.+..|+...-.+.+.+    ++.+..++|+++|..
T Consensus        76 --gaDvVVitaG~~~~----------------------~~~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNP  127 (321)
T PTZ00325         76 --GADLVLICAGVPRK----------------------PGMTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNP  127 (321)
T ss_pred             --CCCEEEECCCCCCC----------------------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCc
Confidence              68999999996321                      22346778888887777777666    555566788887764


Q ss_pred             C
Q 039097          162 G  162 (290)
Q Consensus       162 g  162 (290)
                      .
T Consensus       128 v  128 (321)
T PTZ00325        128 V  128 (321)
T ss_pred             H
Confidence            3

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.05  E-value=1.4e-05  Score=71.28  Aligned_cols=82  Identities=23%  Similarity=0.257  Sum_probs=72.1

Q ss_pred             EEEEecCCCchhHHHHHHHHH----CCCeEEEEecCcccHHHHHHHHHhcCCC---cEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            8 YAVVTGANKGIGYEVVRQLAL----NGIITVLTARDEKGGLEAVEKLKHSGFD---NVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~----~g~~Vi~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      -++|.||+|.-|.-++++++.    +|..+-+.+||++++++.++.+....+.   +..++.||.+|++++.+++.+   
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---   83 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---   83 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---
Confidence            489999999999999999999    7889999999999999999998776532   334889999999999999995   


Q ss_pred             hcCCccEEEEccccCC
Q 039097           81 HFGKLDILVNNAGITG   96 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~   96 (290)
                          ..++||++|.+-
T Consensus        84 ----~~vivN~vGPyR   95 (423)
T KOG2733|consen   84 ----ARVIVNCVGPYR   95 (423)
T ss_pred             ----hEEEEeccccce
Confidence                589999999863

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.04  E-value=6e-05  Score=69.43  Aligned_cols=131  Identities=20%  Similarity=0.155  Sum_probs=86.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .+-.+|+|+||+|++|+-+++.|.++|+.|..+.|+.++..+... +. ........+..|.....++....-+...  .
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~-~~d~~~~~v~~~~~~~~d~~~~~~~~~~--~  152 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VF-FVDLGLQNVEADVVTAIDILKKLVEAVP--K  152 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-cc-ccccccceeeeccccccchhhhhhhhcc--c
Confidence            345689999999999999999999999999999999877666544 11 1111345566666655444333332211  1


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ...+++-++|-....                       ++..--.+|.+.|..++.+++    +..+-.++|++||+.+.
T Consensus       153 ~~~~v~~~~ggrp~~-----------------------ed~~~p~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~  205 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEE-----------------------EDIVTPEKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGT  205 (411)
T ss_pred             cceeEEecccCCCCc-----------------------ccCCCcceecHHHHHHHHHHH----HHhCCceEEEEEeecCc
Confidence            345666666643211                       122334567888888888888    44456799999998776


Q ss_pred             cc
Q 039097          164 LM  165 (290)
Q Consensus       164 ~~  165 (290)
                      ..
T Consensus       206 ~~  207 (411)
T KOG1203|consen  206 KF  207 (411)
T ss_pred             cc
Confidence            53

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.02  E-value=4.1e-05  Score=62.02  Aligned_cols=159  Identities=16%  Similarity=0.060  Sum_probs=109.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+.+.++|.||+|-.|..+.+++++.+-  +|+++.|+.....++        .+.+....+|+...++..+-.+     
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at--------~k~v~q~~vDf~Kl~~~a~~~q-----   82 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT--------DKVVAQVEVDFSKLSQLATNEQ-----   82 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc--------cceeeeEEechHHHHHHHhhhc-----
Confidence            6678899999999999999999999983  899999885332221        2346677788877666554444     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .+|+++++-|.+-...                       ..+..+.+.---.+.+.+..    ++.++.+++.+||..
T Consensus        83 --g~dV~FcaLgTTRgka-----------------------GadgfykvDhDyvl~~A~~A----Ke~Gck~fvLvSS~G  133 (238)
T KOG4039|consen   83 --GPDVLFCALGTTRGKA-----------------------GADGFYKVDHDYVLQLAQAA----KEKGCKTFVLVSSAG  133 (238)
T ss_pred             --CCceEEEeeccccccc-----------------------ccCceEeechHHHHHHHHHH----HhCCCeEEEEEeccC
Confidence              7999999998764322                       22333444444444555555    667888999999986


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +..                                             ...+.|--.|.-++.=+..|    .=-++..+
T Consensus       134 Ad~---------------------------------------------sSrFlY~k~KGEvE~~v~eL----~F~~~~i~  164 (238)
T KOG4039|consen  134 ADP---------------------------------------------SSRFLYMKMKGEVERDVIEL----DFKHIIIL  164 (238)
T ss_pred             CCc---------------------------------------------ccceeeeeccchhhhhhhhc----cccEEEEe
Confidence            543                                             23577888888777666433    22356678


Q ss_pred             ecceeecCcccC
Q 039097          242 CPGYVKTEMTYN  253 (290)
Q Consensus       242 ~PG~v~T~~~~~  253 (290)
                      .||++..+-...
T Consensus       165 RPG~ll~~R~es  176 (238)
T KOG4039|consen  165 RPGPLLGERTES  176 (238)
T ss_pred             cCcceecccccc
Confidence            899987664433

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.92  E-value=0.00011  Score=69.39  Aligned_cols=82  Identities=21%  Similarity=0.285  Sum_probs=55.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++|||+++ +|.++|+.|++.|++|++.+++........+.+...+   +.+....  +...+   .+     
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g---~~~~~~~--~~~~~---~~-----   66 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEG---IKVICGS--HPLEL---LD-----   66 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcC---CEEEeCC--CCHHH---hc-----
Confidence            357899999999986 9999999999999999999987655444444554332   2222111  11111   11     


Q ss_pred             cCCccEEEEccccCCCC
Q 039097           82 FGKLDILVNNAGITGIS   98 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~   98 (290)
                       ..+|+||+++|+....
T Consensus        67 -~~~d~vV~s~gi~~~~   82 (447)
T PRK02472         67 -EDFDLMVKNPGIPYTN   82 (447)
T ss_pred             -CcCCEEEECCCCCCCC
Confidence             1489999999986443

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.90  E-value=3.6e-05  Score=69.72  Aligned_cols=73  Identities=26%  Similarity=0.293  Sum_probs=53.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC-C-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALN-G-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~-g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|+++||||+|.||+.+|++|+++ | .+|++..|+..++....+++.          ..|+.   ++.       +
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~----------~~~i~---~l~-------~  211 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG----------GGKIL---SLE-------E  211 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc----------cccHH---hHH-------H
Confidence            578999999999999999999999865 5 489999998776666554431          12222   222       2


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                      .+...|++|+.++..
T Consensus       212 ~l~~aDiVv~~ts~~  226 (340)
T PRK14982        212 ALPEADIVVWVASMP  226 (340)
T ss_pred             HHccCCEEEECCcCC
Confidence            234689999999974

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.82  E-value=0.00012  Score=66.30  Aligned_cols=77  Identities=17%  Similarity=0.131  Sum_probs=47.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-------CeEEEEecCccc--HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG-------IITVLTARDEKG--GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g-------~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +++||||+|.||.+++..|+..+       ..|++.++++..  ++...-++.+.    ......|++...+..+.+   
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~----~~~~~~~~~~~~~~~~~l---   76 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC----AFPLLKSVVATTDPEEAF---   76 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc----cccccCCceecCCHHHHh---
Confidence            58999999999999999999854       489999996532  22111111100    001112333233322333   


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                          ...|+|||.||..
T Consensus        77 ----~~aDiVI~tAG~~   89 (325)
T cd01336          77 ----KDVDVAILVGAMP   89 (325)
T ss_pred             ----CCCCEEEEeCCcC
Confidence                3799999999975

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.67  E-value=0.00025  Score=58.89  Aligned_cols=79  Identities=13%  Similarity=0.130  Sum_probs=48.3

Q ss_pred             CCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC
Q 039097            4 TAKRYAVVTGA----------------NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD   67 (290)
Q Consensus         4 ~~~k~~lITGg----------------s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~   67 (290)
                      |+||+||||+|                ||..|.++|+.+..+|++|+++..... ...         +..+.  ..++.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~---------p~~~~--~i~v~s   68 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP---------PPGVK--VIRVES   68 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------TTEE--EEE-SS
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc---------cccce--EEEecc
Confidence            57999999977                466799999999999999999987742 111         11233  344555


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCC
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAGITGI   97 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag~~~~   97 (290)
                      .++..+.+.+   .+...|++|++|++...
T Consensus        69 a~em~~~~~~---~~~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   69 AEEMLEAVKE---LLPSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHHH---HGGGGSEEEE-SB--SE
T ss_pred             hhhhhhhhcc---ccCcceeEEEecchhhe
Confidence            5555555544   44556999999998754

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.63  E-value=0.00027  Score=56.63  Aligned_cols=76  Identities=20%  Similarity=0.283  Sum_probs=55.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++++++|+|+ |++|.++++.|.+.| ..|++.+|++++.++..+++....      +..+..+.++.          
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~------~~~~~~~~~~~----------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG------IAIAYLDLEEL----------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc------cceeecchhhc----------
Confidence            356789999998 899999999999996 789999999887776666553211      22334443322          


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      ....|++|++....
T Consensus        79 ~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 LAEADLIINTTPVG   92 (155)
T ss_pred             cccCCEEEeCcCCC
Confidence            24789999999864

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.59  E-value=0.00073  Score=60.62  Aligned_cols=80  Identities=24%  Similarity=0.353  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+++++|+|+++++|.++++.+...|++|+++++++.+.+.+ ..+   +..    ..+|..+.+....+.+....  ++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---~~~----~~~~~~~~~~~~~~~~~~~~--~~  235 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KEL---GAD----YVIDYRKEDFVREVRELTGK--RG  235 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC----eEEecCChHHHHHHHHHhCC--CC
Confidence            578999999999999999999999999999999887654433 221   211    22466666655555444322  36


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++++++|.
T Consensus       236 ~d~~i~~~g~  245 (342)
T cd08266         236 VDVVVEHVGA  245 (342)
T ss_pred             CcEEEECCcH
Confidence            9999999983

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.57  E-value=0.00078  Score=59.84  Aligned_cols=80  Identities=15%  Similarity=0.201  Sum_probs=55.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++++++|+|+++++|.++++.+...|++|+++++++++.+.. .++   +.+    ..+|..+.+..+++.+....  +.
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~~~~~--~~  213 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQA---GAD----AVFNYRAEDLADRILAATAG--QG  213 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC----EEEeCCCcCHHHHHHHHcCC--Cc
Confidence            578999999999999999999999999999999987654443 222   211    22455555544444333211  36


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|.+++++|.
T Consensus       214 ~d~vi~~~~~  223 (325)
T cd08253         214 VDVIIEVLAN  223 (325)
T ss_pred             eEEEEECCch
Confidence            9999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.48  E-value=0.00031  Score=62.30  Aligned_cols=76  Identities=17%  Similarity=0.274  Sum_probs=54.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|+|+ ||+|++++..|+..| .+|++++|+.++.++..+++....  .+.   .++    +..       +.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~--~~~---~~~----~~~-------~~  182 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG--KAE---LDL----ELQ-------EE  182 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--cee---ecc----cch-------hc
Confidence            467899999997 899999999999999 689999999888777666653211  011   111    111       12


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      ....|+||++....
T Consensus       183 ~~~~DivInaTp~g  196 (278)
T PRK00258        183 LADFDLIINATSAG  196 (278)
T ss_pred             cccCCEEEECCcCC
Confidence            24689999998754

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.46  E-value=0.00061  Score=60.12  Aligned_cols=75  Identities=16%  Similarity=0.302  Sum_probs=54.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..+.+...+  .......|     +   .      ...
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~--~~~~~~~~-----~---~------~~~  177 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYG--EIQAFSMD-----E---L------PLH  177 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcC--ceEEechh-----h---h------ccc
Confidence            35789999998 699999999999999999999999888777776664322  12221111     1   0      123


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ..|+||++.+..
T Consensus       178 ~~DivInatp~g  189 (270)
T TIGR00507       178 RVDLIINATSAG  189 (270)
T ss_pred             CccEEEECCCCC
Confidence            689999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.46  E-value=0.001  Score=60.35  Aligned_cols=77  Identities=18%  Similarity=0.301  Sum_probs=52.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC--
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG--   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--   83 (290)
                      |.++||+||+||+|...++.+...|+.++++..++++.+ ..+   +.+.+    ...|..+.+    +.+++.+..+  
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~---~lGAd----~vi~y~~~~----~~~~v~~~t~g~  210 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK---ELGAD----HVINYREED----FVEQVRELTGGK  210 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH---hcCCC----EEEcCCccc----HHHHHHHHcCCC
Confidence            789999999999999999999999987777777665544 333   33333    223344433    3344433322  


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|+++...|-
T Consensus       211 gvDvv~D~vG~  221 (326)
T COG0604         211 GVDVVLDTVGG  221 (326)
T ss_pred             CceEEEECCCH
Confidence            59999999984

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.44  E-value=0.0022  Score=71.84  Aligned_cols=183  Identities=14%  Similarity=0.061  Sum_probs=112.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +.++.++|++.+++++.+++++|.++|+.|+++..-.. .   .... ......+..+...-.+..++..+++.+....+
T Consensus      1753 ~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~-~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1753 QSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWV-V---SHSA-SPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             ccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccc-c---cccc-cccccccccccccccchHHHHHHHHhhhcccc
Confidence            34778888888999999999999999999887642211 0   0000 00011222344555566778888888877778


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      .++.+||..+.........                 +.-.....-...+...|.+.|.+.+.+.....+.++.++...|.
T Consensus      1828 ~~~g~i~l~~~~~~~~~~~-----------------~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~ 1890 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSVADKV-----------------DAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGG 1890 (2582)
T ss_pred             ccceEEEeccccccccccc-----------------cccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCc
Confidence            8999999887543210000                 00000111113345578888988777766566789999988877


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPA-NAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      .++....                                    ...+ ...--....+++.+|+|+++.|+|++.+-+|.
T Consensus      1891 ~g~~~~~------------------------------------~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vD 1934 (2582)
T TIGR02813      1891 FGYSNGD------------------------------------ADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALD 1934 (2582)
T ss_pred             cccCCcc------------------------------------ccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEe
Confidence            6652100                                    0000 00000234689999999999999987776655


Q ss_pred             cc
Q 039097          243 PG  244 (290)
Q Consensus       243 PG  244 (290)
                      -.
T Consensus      1935 l~ 1936 (2582)
T TIGR02813      1935 LA 1936 (2582)
T ss_pred             CC
Confidence            43

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.42  E-value=0.0011  Score=60.14  Aligned_cols=80  Identities=21%  Similarity=0.263  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|+||+|++|..+++.+...|++|+.+++++++.+...+.+   +.+    ..+|..+.++..+.+.+...  +.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~----~vi~~~~~~~~~~~i~~~~~--~g  221 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFD----DAFNYKEEPDLDAALKRYFP--NG  221 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCc----eeEEcCCcccHHHHHHHhCC--CC
Confidence            4789999999999999999999999999999998876654443323   211    11333333233333333322  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|+++.+.|
T Consensus       222 vd~v~d~~g  230 (338)
T cd08295         222 IDIYFDNVG  230 (338)
T ss_pred             cEEEEECCC
Confidence            999999887

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd00704 MDH Malate dehydrogenase

Probab=97.34  E-value=0.0015  Score=59.15  Aligned_cols=73  Identities=19%  Similarity=0.237  Sum_probs=48.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCc--ccHHHHHHHHHhcCCCcEEEEEeeCCCHHH--HH--HH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDE--KGGLEAVEKLKHSGFDNVIFHQLDVADPAA--IH--SV   74 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~--v~--~~   74 (290)
                      ++.||||+|.||..++..|+..|.       .+++.|+++  +.               ......|+.|...  ..  .+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~---------------~~g~~~Dl~d~~~~~~~~~~i   66 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA---------------LEGVVMELQDCAFPLLKGVVI   66 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc---------------cceeeeehhhhcccccCCcEE
Confidence            589999999999999999998763       499999986  32               2333444444310  00  00


Q ss_pred             HHHHHhhcCCccEEEEccccC
Q 039097           75 ADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~   95 (290)
                      .....+.+...|++|+.||.-
T Consensus        67 ~~~~~~~~~~aDiVVitAG~~   87 (323)
T cd00704          67 TTDPEEAFKDVDVAILVGAFP   87 (323)
T ss_pred             ecChHHHhCCCCEEEEeCCCC
Confidence            011223345799999999974

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06849 hypothetical protein; Provisional

Probab=97.32  E-value=0.0022  Score=59.61  Aligned_cols=83  Identities=18%  Similarity=0.139  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.|+|||||++..+|..+|+.|.+.|++|++++.++.......+-+     +....+...-.+.+...+.+.++.++. +
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~   76 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-----DGFYTIPSPRWDPDAYIQALLSIVQRE-N   76 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-----hheEEeCCCCCCHHHHHHHHHHHHHHc-C
Confidence            4689999999999999999999999999999998865433211111     122222222334444444444444443 5


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|....
T Consensus        77 id~vIP~~e   85 (389)
T PRK06849         77 IDLLIPTCE   85 (389)
T ss_pred             CCEEEECCh
Confidence            899998775

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.31  E-value=0.0029  Score=57.07  Aligned_cols=80  Identities=19%  Similarity=0.181  Sum_probs=58.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      |++-.++++.|+|+ |++|.++|..|+..|.  .+++.|++.+.++....++.+...  .++.+. .  .+.       +
T Consensus         1 ~~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~-~--~~~-------~   69 (315)
T PRK00066          1 MMKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY-A--GDY-------S   69 (315)
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE-e--CCH-------H
Confidence            66777889999998 9999999999999997  799999998887777666665431  122222 1  121       1


Q ss_pred             HHHhhcCCccEEEEccccC
Q 039097           77 FIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~   95 (290)
                      .    +..-|++|..||..
T Consensus        70 ~----~~~adivIitag~~   84 (315)
T PRK00066         70 D----CKDADLVVITAGAP   84 (315)
T ss_pred             H----hCCCCEEEEecCCC
Confidence            1    23689999999974

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.30  E-value=0.0017  Score=59.31  Aligned_cols=80  Identities=21%  Similarity=0.248  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|+|++|++|..+++.+...|++|+.+++++++.+.+.+++   +.+    ...|-.+.+++.+.+.+...  +.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~----~vi~~~~~~~~~~~i~~~~~--~g  228 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFD----EAFNYKEEPDLDAALKRYFP--EG  228 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCC----EEEECCCcccHHHHHHHHCC--CC
Confidence            4789999999999999999999999999999888876644433232   211    12233332233333333321  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.++.+.|
T Consensus       229 vD~v~d~vG  237 (348)
T PLN03154        229 IDIYFDNVG  237 (348)
T ss_pred             cEEEEECCC
Confidence            999999888

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.30  E-value=0.0015  Score=59.17  Aligned_cols=113  Identities=19%  Similarity=0.118  Sum_probs=67.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHH--HH--HH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIH--SV--AD   76 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~--~~--~~   76 (290)
                      ++.|+|++|.+|..++..|+..+.       .+++.|+++...             .......|+.|.....  ..  ..
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-------------~a~g~~~Dl~d~~~~~~~~~~~~~   67 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-------------VLEGVVMELMDCAFPLLDGVVPTH   67 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-------------ccceeEeehhcccchhcCceeccC
Confidence            478999999999999999998664       599999975431             1233445555544110  00  00


Q ss_pred             HHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC--CCCeE
Q 039097           77 FIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS--DSARI  154 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~--~~~~i  154 (290)
                      ...+.+...|++|+.||....                      ..+.+.+.+..|+--.-.+.+.+    .+.  +.+.+
T Consensus        68 ~~~~~~~~aDiVVitAG~~~~----------------------~~~tr~~ll~~N~~i~k~i~~~i----~~~~~~~~ii  121 (324)
T TIGR01758        68 DPAVAFTDVDVAILVGAFPRK----------------------EGMERRDLLSKNVKIFKEQGRAL----DKLAKKDCKV  121 (324)
T ss_pred             ChHHHhCCCCEEEEcCCCCCC----------------------CCCcHHHHHHHHHHHHHHHHHHH----HhhCCCCeEE
Confidence            112334579999999997421                      12335666666665444444444    443  34566


Q ss_pred             EEEcC
Q 039097          155 VNVSS  159 (290)
Q Consensus       155 V~isS  159 (290)
                      |.+|-
T Consensus       122 ivvsN  126 (324)
T TIGR01758       122 LVVGN  126 (324)
T ss_pred             EEeCC
Confidence            66654

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK05086 malate dehydrogenase; Provisional

Probab=97.25  E-value=0.0017  Score=58.45  Aligned_cols=35  Identities=26%  Similarity=0.152  Sum_probs=28.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHH-C--CCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLAL-N--GIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~-~--g~~Vi~~~r~~~   41 (290)
                      ++++|.||+|+||.+++..|.. .  ++.+++.+|++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4789999999999999998865 3  357888888754

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.24  E-value=0.0025  Score=57.40  Aligned_cols=79  Identities=20%  Similarity=0.229  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+||+|++|..+++.+...|++|+.+++++++.+.. +++   +.+    ...|..+.+...+..+....  +.
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l---Ga~----~vi~~~~~~~~~~~~~~~~~--~g  207 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL---GFD----VAFNYKTVKSLEETLKKASP--DG  207 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCC----EEEeccccccHHHHHHHhCC--CC
Confidence            478999999999999999999988999999999887654433 222   221    12233333334444443321  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|+++.+.|
T Consensus       208 vdvv~d~~G  216 (325)
T TIGR02825       208 YDCYFDNVG  216 (325)
T ss_pred             eEEEEECCC
Confidence            999999887

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.21  E-value=0.0027  Score=57.82  Aligned_cols=82  Identities=17%  Similarity=0.322  Sum_probs=58.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---------------------ccHHHHHHHHHhcCCC-cEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE---------------------KGGLEAVEKLKHSGFD-NVI   59 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~---------------------~~~~~~~~~l~~~~~~-~~~   59 (290)
                      .+++++|+|.|+ ||+|..+|+.|+..|. ++.++|++.                     .+.+.+.+.++...+. ++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            467889999986 7899999999999998 798898863                     3445555666655433 566


Q ss_pred             EEEeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           60 FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        60 ~~~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      .+..|++. +.+.+++       .+.|++|.+..
T Consensus       100 ~~~~~~~~-~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475        100 PVVTDVTV-EELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEeccCCH-HHHHHHh-------cCCCEEEEcCC
Confidence            67777753 3444443       25788888764

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.20  E-value=0.00088  Score=58.52  Aligned_cols=75  Identities=16%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++|+||++. |+.++++|.++|+.|+++.++....+...+    .+   ...+..+..+.+++.+++++     .++|+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g---~~~v~~g~l~~~~l~~~l~~-----~~i~~   68 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ---ALTVHTGALDPQELREFLKR-----HSIDI   68 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC---CceEEECCCCHHHHHHHHHh-----cCCCE
Confidence            6999999998 999999999999999999998764332221    11   23355677788887777765     37999


Q ss_pred             EEEccccC
Q 039097           88 LVNNAGIT   95 (290)
Q Consensus        88 li~~Ag~~   95 (290)
                      ||+.+..+
T Consensus        69 VIDAtHPf   76 (256)
T TIGR00715        69 LVDATHPF   76 (256)
T ss_pred             EEEcCCHH
Confidence            99998765

This enzyme was found to be a monomer by gel filtration.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.19  E-value=0.0074  Score=47.82  Aligned_cols=114  Identities=22%  Similarity=0.216  Sum_probs=72.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+|++|.+|.++|..|+..+.  ++++.++++++++....++...   ......+..   .+.++           +
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            688999999999999999999985  7999999988777666666543   212222222   22221           2


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ...|++|..||....                      +.+.-.+.++.|+.-.-.+.+.+.++   .+.+.++.+|-.
T Consensus        68 ~~aDivvitag~~~~----------------------~g~sR~~ll~~N~~i~~~~~~~i~~~---~p~~~vivvtNP  120 (141)
T PF00056_consen   68 KDADIVVITAGVPRK----------------------PGMSRLDLLEANAKIVKEIAKKIAKY---APDAIVIVVTNP  120 (141)
T ss_dssp             TTESEEEETTSTSSS----------------------TTSSHHHHHHHHHHHHHHHHHHHHHH---STTSEEEE-SSS
T ss_pred             ccccEEEEecccccc----------------------ccccHHHHHHHhHhHHHHHHHHHHHh---CCccEEEEeCCc
Confidence            368999999997421                      11224455666665555555555332   244666666543

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.16  E-value=0.00054  Score=57.70  Aligned_cols=46  Identities=20%  Similarity=0.310  Sum_probs=39.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~   49 (290)
                      +++||+++|+|.+ .+|+.+|+.|.+.|++|++.++++++.++..+.
T Consensus        25 ~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          25 SLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            5889999999996 899999999999999999999997766655443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.15  E-value=0.0057  Score=54.99  Aligned_cols=74  Identities=24%  Similarity=0.218  Sum_probs=52.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++.|.|+ |++|+++|..|+..|  .+|++.+|++++.+....++.+..   +....+..   .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH-----------
Confidence            36788886 899999999999999  479999999988877776665432   12222221   22221           


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      +...|++|+++|..
T Consensus        66 l~~aDIVIitag~~   79 (306)
T cd05291          66 CKDADIVVITAGAP   79 (306)
T ss_pred             hCCCCEEEEccCCC
Confidence            13689999999964

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.07  E-value=0.00096  Score=64.43  Aligned_cols=47  Identities=23%  Similarity=0.263  Sum_probs=40.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            467899999999 69999999999999999999999977776665544

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.05  E-value=0.0025  Score=57.68  Aligned_cols=153  Identities=16%  Similarity=0.084  Sum_probs=90.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCccc--HHHHHHHHHhcC-C--CcEEEEEeeCCCHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEKG--GLEAVEKLKHSG-F--DNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~~--~~~~~~~l~~~~-~--~~~~~~~~Dl~~~~~v~~~   74 (290)
                      +++.|+|++|.||..+|..|+..|.       .+++.|+++..  ++....++.+.. .  ..+.     ++. ++    
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-----i~~-~~----   72 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-----ITD-DP----   72 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-----Eec-Cc----
Confidence            4789999999999999999998875       69999996433  443333333221 0  1111     111 11    


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CC
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SA  152 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~  152 (290)
                      .+    .+..-|++|.+||... .                     +.+.-.+.+..|+-    +++.+.+.+.+..  .+
T Consensus        73 ~~----~~~daDivvitaG~~~-k---------------------~g~tR~dll~~N~~----i~~~i~~~i~~~~~~~~  122 (322)
T cd01338          73 NV----AFKDADWALLVGAKPR-G---------------------PGMERADLLKANGK----IFTAQGKALNDVASRDV  122 (322)
T ss_pred             HH----HhCCCCEEEEeCCCCC-C---------------------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCe
Confidence            11    2246899999999742 1                     11223445666654    4555555555543  46


Q ss_pred             eEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh
Q 039097          153 RIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK  232 (290)
Q Consensus       153 ~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e  232 (290)
                      .+|.+|-..-...+                           ......      -++ +....|++++.-...|...++..
T Consensus       123 iiivvsNPvD~~t~---------------------------~~~k~s------g~~-p~~~ViG~t~LDs~Rl~~~la~~  168 (322)
T cd01338         123 KVLVVGNPCNTNAL---------------------------IAMKNA------PDI-PPDNFTAMTRLDHNRAKSQLAKK  168 (322)
T ss_pred             EEEEecCcHHHHHH---------------------------HHHHHc------CCC-ChHheEEehHHHHHHHHHHHHHH
Confidence            77777643222111                           111100      012 33468999999999999999999


Q ss_pred             C
Q 039097          233 Y  233 (290)
Q Consensus       233 ~  233 (290)
                      +
T Consensus       169 l  169 (322)
T cd01338         169 A  169 (322)
T ss_pred             h
Confidence            8

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.04  E-value=0.0036  Score=52.75  Aligned_cols=82  Identities=17%  Similarity=0.251  Sum_probs=55.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~   61 (290)
                      .+++++|+|.| .||+|..+|+.|+..|. ++.+.|++.                   .+.+.+.+.+....+. ++..+
T Consensus        18 kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            46778899988 67999999999999998 799998762                   3444555555554432 34444


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      ..++.+ +.+.++++       ..|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~~-------~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLIN-------NVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHHh-------CCCEEEECCC
Confidence            444433 33333333       6798888765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK14968 putative methyltransferase; Provisional

Probab=97.03  E-value=0.01  Score=48.88  Aligned_cols=78  Identities=23%  Similarity=0.184  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCc--EEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDN--VIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~--~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++++|-.|++.|.   ++..|+..+.+|+.+++++...+.+.+.+....-..  +.++.+|+.+.     +    .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~----~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----F----RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----c----cc--
Confidence            56788888877665   455555568899999999887777766665443222  77888887542     1    11  


Q ss_pred             CCccEEEEccccCC
Q 039097           83 GKLDILVNNAGITG   96 (290)
Q Consensus        83 ~~id~li~~Ag~~~   96 (290)
                      ..+|+++.|..+..
T Consensus        89 ~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 DKFDVILFNPPYLP  102 (188)
T ss_pred             cCceEEEECCCcCC
Confidence            26899999987654

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.01  E-value=0.0023  Score=56.94  Aligned_cols=77  Identities=17%  Similarity=0.126  Sum_probs=54.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +.++|+++|.|+ ||.|++++..|+..|+ +|++++|+.++.+...+.+...... ..+...     +++.+.       
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~-~~~~~~-----~~~~~~-------  189 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA-ARATAG-----SDLAAA-------  189 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC-eEEEec-----cchHhh-------
Confidence            456789999997 6799999999999998 7999999998888877777543322 222111     111111       


Q ss_pred             cCCccEEEEccc
Q 039097           82 FGKLDILVNNAG   93 (290)
Q Consensus        82 ~~~id~li~~Ag   93 (290)
                      ....|+||++..
T Consensus       190 ~~~aDiVInaTp  201 (284)
T PRK12549        190 LAAADGLVHATP  201 (284)
T ss_pred             hCCCCEEEECCc
Confidence            236899999953

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.00  E-value=0.0021  Score=57.27  Aligned_cols=81  Identities=21%  Similarity=0.215  Sum_probs=63.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .-.-..++|-||+|..|.-+|++|+++|.+-.+.+||..++.....++-.    ....+.+  -++..+.++++      
T Consensus         3 ~e~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~----~~~~~p~--~~p~~~~~~~~------   70 (382)
T COG3268           3 MEREYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP----EAAVFPL--GVPAALEAMAS------   70 (382)
T ss_pred             CCcceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc----cccccCC--CCHHHHHHHHh------
Confidence            33455789999999999999999999999999999999998887777632    2223333  34666666666      


Q ss_pred             CCccEEEEccccCC
Q 039097           83 GKLDILVNNAGITG   96 (290)
Q Consensus        83 ~~id~li~~Ag~~~   96 (290)
                       +.++|+||+|.+.
T Consensus        71 -~~~VVlncvGPyt   83 (382)
T COG3268          71 -RTQVVLNCVGPYT   83 (382)
T ss_pred             -cceEEEecccccc
Confidence             6799999999874

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.97  E-value=0.01  Score=51.28  Aligned_cols=79  Identities=20%  Similarity=0.270  Sum_probs=52.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ..+.+++|+|+++ +|.++++.+...|.+|+++++++++.+.. +++   +..    ..+|..+.+....+.   ....+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~---~~~~~  200 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GAD----HVIDYKEEDLEEELR---LTGGG  200 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCc----eeccCCcCCHHHHHH---HhcCC
Confidence            3578999999999 99999999999999999999886554332 222   211    123333333333333   22234


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|++++.
T Consensus       201 ~~d~vi~~~~~  211 (271)
T cd05188         201 GADVVIDAVGG  211 (271)
T ss_pred             CCCEEEECCCC
Confidence            79999999883

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.95  E-value=0.0033  Score=56.02  Aligned_cols=41  Identities=17%  Similarity=0.168  Sum_probs=36.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL   44 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~   44 (290)
                      ++.|++++|.|. |++|+++|+.|...|++|++.+|++.+..
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~  188 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLA  188 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            577999999999 66999999999999999999999976543

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.94  E-value=0.0058  Score=54.30  Aligned_cols=80  Identities=19%  Similarity=0.235  Sum_probs=54.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +.++|+++|.|+ ||-|++++-.|++.|+ +|++..|+.++.++..+.+....+.... ...|   ..++.+..      
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVI------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHH------
Confidence            356889999997 8999999999999997 6889999998888877776433322111 1122   22222122      


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                       ...|+|||+...
T Consensus       193 -~~~divINaTp~  204 (283)
T PRK14027        193 -AAADGVVNATPM  204 (283)
T ss_pred             -hhcCEEEEcCCC
Confidence             257999988764

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.94  E-value=0.006  Score=55.77  Aligned_cols=81  Identities=23%  Similarity=0.375  Sum_probs=53.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      -+|+.+||.||+||+|.+.++.....|+..++++++.+.. +..+++   +.+    ..+|..+++-+++..+..   .+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l---GAd----~vvdy~~~~~~e~~kk~~---~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL---GAD----EVVDYKDENVVELIKKYT---GK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc---CCc----EeecCCCHHHHHHHHhhc---CC
Confidence            3578999999999999999999999995555555554432 223332   222    346666744333333322   46


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ++|+|+.+.|-.
T Consensus       225 ~~DvVlD~vg~~  236 (347)
T KOG1198|consen  225 GVDVVLDCVGGS  236 (347)
T ss_pred             CccEEEECCCCC
Confidence            899999999963

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.93  E-value=0.0016  Score=61.53  Aligned_cols=81  Identities=15%  Similarity=0.145  Sum_probs=55.1

Q ss_pred             cCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC
Q 039097            3 ETAKRYAVVTGA----------------NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA   66 (290)
Q Consensus         3 ~~~~k~~lITGg----------------s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~   66 (290)
                      +++||++|||+|                ||-.|++||+.+..+|++|++++-... +       .  .+..+.++.  +.
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~-------~--~p~~v~~i~--V~  320 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L-------A--DPQGVKVIH--VE  320 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C-------C--CCCCceEEE--ec
Confidence            589999999977                456799999999999999998874321 0       0  112244443  33


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCCCCC
Q 039097           67 DPAAIHSVADFIRSHFGKLDILVNNAGITGISS   99 (290)
Q Consensus        67 ~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~   99 (290)
                      +   ..++.+.+.+.++ .|++|++|++....+
T Consensus       321 t---a~eM~~av~~~~~-~Di~I~aAAVaDyrp  349 (475)
T PRK13982        321 S---ARQMLAAVEAALP-ADIAIFAAAVADWRV  349 (475)
T ss_pred             C---HHHHHHHHHhhCC-CCEEEEeccccceee
Confidence            3   4445555555554 799999999875433

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.92  E-value=0.0074  Score=55.01  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=32.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      .+++.+|+|.|+ ||+|..+|+.|+..|. ++.++|++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            466788999988 8999999999999998 899998763

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.92  E-value=0.0041  Score=55.24  Aligned_cols=79  Identities=18%  Similarity=0.118  Sum_probs=54.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.++..+++....  .+  ..  +...+++.       ..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~--~~--~~--~~~~~~~~-------~~  187 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG--VI--TR--LEGDSGGL-------AI  187 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC--cc--ee--ccchhhhh-------hc
Confidence            357889999976 9999999999999997 69999999888877766653221  11  11  11112221       11


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      ....|+|||+....
T Consensus       188 ~~~~DiVInaTp~g  201 (282)
T TIGR01809       188 EKAAEVLVSTVPAD  201 (282)
T ss_pred             ccCCCEEEECCCCC
Confidence            24689999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.88  E-value=0.0065  Score=56.12  Aligned_cols=77  Identities=9%  Similarity=0.064  Sum_probs=53.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +.+++++|.|+ |.+|+.+++.|...|++|++.+|++.+.+.....+    +..   +..+..+.+.+.+.+.       
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~----g~~---v~~~~~~~~~l~~~l~-------  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF----GGR---IHTRYSNAYEIEDAVK-------  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc----Cce---eEeccCCHHHHHHHHc-------
Confidence            45677889977 78999999999999999999999876655433322    111   2234455555444433       


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ..|++|+++++.
T Consensus       230 ~aDvVI~a~~~~  241 (370)
T TIGR00518       230 RADLLIGAVLIP  241 (370)
T ss_pred             cCCEEEEccccC
Confidence            579999988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.87  E-value=0.0039  Score=58.37  Aligned_cols=76  Identities=12%  Similarity=0.206  Sum_probs=54.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++.+|+++|.|+ ||+|+.+++.|+..|+ +++++.|+.++.+...+++..     .     .+...+++.+.      
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-----~-----~~~~~~~l~~~------  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-----A-----SAHYLSELPQL------  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-----C-----eEecHHHHHHH------
Confidence            3578999999998 9999999999999996 699999998776665554421     1     11122233222      


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                       +...|+||++.+--
T Consensus       240 -l~~aDiVI~aT~a~  253 (414)
T PRK13940        240 -IKKADIIIAAVNVL  253 (414)
T ss_pred             -hccCCEEEECcCCC
Confidence             34689999999864

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.87  E-value=0.0049  Score=54.52  Aligned_cols=80  Identities=18%  Similarity=0.246  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+++++|+|+++++|.++++.+...|++|++++++.+..+.. +++   +..    ..+|..+.+...++.+ .... +.
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~-~~~~-~~  208 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD----VAINYRTEDFAEEVKE-ATGG-RG  208 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC----EEEeCCchhHHHHHHH-HhCC-CC
Confidence            578999999999999999999999999999999886654443 222   211    2244444333333332 2221 36


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|.+|+++|.
T Consensus       209 ~d~vi~~~g~  218 (323)
T cd05276         209 VDVILDMVGG  218 (323)
T ss_pred             eEEEEECCch
Confidence            9999999983

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.84  E-value=0.0043  Score=56.20  Aligned_cols=77  Identities=19%  Similarity=0.202  Sum_probs=51.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .++||+||+|++|.++++.+...|+ +|+.+++++++.+...+++   +.+.    ..|..+ +++.+.+.++..  +.+
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~----vi~~~~-~~~~~~i~~~~~--~gv  225 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDA----AINYKT-DNVAERLRELCP--EGV  225 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcE----EEECCC-CCHHHHHHHHCC--CCc
Confidence            7999999999999999998888999 7999988876655444333   2111    223333 223333333322  369


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |++|.+.|
T Consensus       226 d~vid~~g  233 (345)
T cd08293         226 DVYFDNVG  233 (345)
T ss_pred             eEEEECCC
Confidence            99999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.81  E-value=0.012  Score=52.79  Aligned_cols=79  Identities=24%  Similarity=0.319  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+++++.+.+.+.+.+   +-.    ...|..+.+..+++.+ ...  +.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~----~~~~~~~~~~~~~v~~-~~~--~~  214 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD----AAINYKTPDLAEALKE-AAP--DG  214 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc----eEEecCChhHHHHHHH-hcc--CC
Confidence            4689999999999999999999999999999988876544332212   111    1223333332222222 221  46


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.+.|
T Consensus       215 ~d~vi~~~g  223 (329)
T cd05288         215 IDVYFDNVG  223 (329)
T ss_pred             ceEEEEcch
Confidence            999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.80  E-value=0.014  Score=45.15  Aligned_cols=76  Identities=18%  Similarity=0.316  Sum_probs=55.7

Q ss_pred             EEEEecCCCchhHHHHHHHHH-CCCeEE-EEecCc----------------------ccHHHHHHHHHhcCCCcEEEEEe
Q 039097            8 YAVVTGANKGIGYEVVRQLAL-NGIITV-LTARDE----------------------KGGLEAVEKLKHSGFDNVIFHQL   63 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~-~g~~Vi-~~~r~~----------------------~~~~~~~~~l~~~~~~~~~~~~~   63 (290)
                      +++|.|.+|.+|+.+++.+.+ .++.++ ..+|++                      .++++..++     .+    +..
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D----VvI   72 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD----VVI   72 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S----EEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC----EEE
Confidence            689999999999999999999 577755 446665                      122222222     12    778


Q ss_pred             eCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 039097           64 DVADPAAIHSVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        64 Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      |++.++.+.+.++.+.+.  ++.+|+-+.|+
T Consensus        73 DfT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   73 DFTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             EES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             EcCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999999999998887  89999999996

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.79  E-value=0.014  Score=55.78  Aligned_cols=82  Identities=18%  Similarity=0.209  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC-------------CHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA-------------DPAAI   71 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-------------~~~~v   71 (290)
                      .+.+++|.|+ |.+|...++.+...|+.|++++++..+++.+. ++   +   ..++..|..             +.+..
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~l---G---a~~v~v~~~e~g~~~~gYa~~~s~~~~  234 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SM---G---AEFLELDFKEEGGSGDGYAKVMSEEFI  234 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C---CeEEeccccccccccccceeecCHHHH
Confidence            3568999995 89999999999999999999999987644322 23   1   333444432             23444


Q ss_pred             HHHHHHHHhhcCCccEEEEcccc
Q 039097           72 HSVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        72 ~~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      ++..+.+.+.....|++|+++-+
T Consensus       235 ~~~~~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       235 AAEMELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHHHHHhCCCCEEEECccc
Confidence            45555566566789999999954

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.78  E-value=0.0049  Score=55.23  Aligned_cols=75  Identities=19%  Similarity=0.269  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.+++|+||++++|.++++.+...|++|+.+++++++.+.. ++   .+..  .+  .|.   +++.+.+.   + ...
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~~~~--~~--~~~---~~~~~~~~---~-~~~  226 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KE---LGAD--YV--IDG---SKFSEDVK---K-LGG  226 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HH---cCCc--EE--Eec---HHHHHHHH---h-ccC
Confidence            477999999999999999999999999999999876554332 22   1211  11  122   11222222   2 237


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++++++|.
T Consensus       227 ~d~v~~~~g~  236 (332)
T cd08259         227 ADVVIELVGS  236 (332)
T ss_pred             CCEEEECCCh
Confidence            9999999884

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.76  E-value=0.014  Score=50.69  Aligned_cols=82  Identities=15%  Similarity=0.159  Sum_probs=52.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~   61 (290)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+....+. ++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            356789999988 9999999999999997 788887543                   2233334444444332 44555


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      ...+. ++.+.++++       ..|++|.+..
T Consensus       108 ~~~i~-~~~~~~~~~-------~~DiVi~~~D  131 (245)
T PRK05690        108 NARLD-DDELAALIA-------GHDLVLDCTD  131 (245)
T ss_pred             eccCC-HHHHHHHHh-------cCCEEEecCC
Confidence            55444 233333333       5788887764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.73  E-value=0.014  Score=50.20  Aligned_cols=82  Identities=17%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~   61 (290)
                      .+++++|+|.| .||+|.++|+.|+..|. ++++.|.+.                   .+.+.+.+.+++..+. ++..+
T Consensus        18 ~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            46678899988 68999999999999998 677775432                   3344455556555543 46666


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      ..+++ .+.+.++++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            66663 344444443       5899998876

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.64  E-value=0.0073  Score=53.32  Aligned_cols=79  Identities=25%  Similarity=0.260  Sum_probs=56.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG-   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-   83 (290)
                      .|.|++|++|+|.+|.-+.+.-.-+|++|+.++-.+++..-..+++   +.+    ...|-..+ +   +.+.+.+..+ 
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD----~~idyk~~-d---~~~~L~~a~P~  218 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFD----AGIDYKAE-D---FAQALKEACPK  218 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCc----eeeecCcc-c---HHHHHHHHCCC
Confidence            4899999999999999888877788999999999887765554444   112    22344443 2   3444444444 


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .||+.+-|.|-
T Consensus       219 GIDvyfeNVGg  229 (340)
T COG2130         219 GIDVYFENVGG  229 (340)
T ss_pred             CeEEEEEcCCc
Confidence            79999999994

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.64  E-value=0.036  Score=52.40  Aligned_cols=78  Identities=22%  Similarity=0.290  Sum_probs=51.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.+|+++|+|++ ++|.++|+.|+++|++|++.+.+....  ..+++.... ..+.+...... ..    ..       
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~-~gi~~~~g~~~-~~----~~-------   65 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMF-DGLVFYTGRLK-DA----LD-------   65 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhcc-CCcEEEeCCCC-HH----HH-------
Confidence            3778999999986 899999999999999999998765531  122332211 12333322211 11    11       


Q ss_pred             CCccEEEEccccCC
Q 039097           83 GKLDILVNNAGITG   96 (290)
Q Consensus        83 ~~id~li~~Ag~~~   96 (290)
                      ...|.||...|+-.
T Consensus        66 ~~~d~vv~spgi~~   79 (445)
T PRK04308         66 NGFDILALSPGISE   79 (445)
T ss_pred             hCCCEEEECCCCCC
Confidence            26899999999864

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.63  E-value=0.01  Score=52.91  Aligned_cols=48  Identities=21%  Similarity=0.299  Sum_probs=37.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcc---cHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEK---GGLEAVEKLK   51 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~---~~~~~~~~l~   51 (290)
                      ++++|+++|.|+ ||-+++++-.|+..|+ +|.+..|+.+   +.++..+++.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            457899999997 5559999999999997 7999999854   5555555543

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.60  E-value=0.015  Score=53.31  Aligned_cols=37  Identities=24%  Similarity=0.287  Sum_probs=31.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            467789999987 8999999999999998 788887653

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.59  E-value=0.014  Score=49.63  Aligned_cols=81  Identities=21%  Similarity=0.189  Sum_probs=52.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      .+++++|+|.|+ ||+|..+++.|+..|. ++++.|.+.                  .+.+.+.+.+....+. ++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            466788999984 8999999999999998 588988762                  2333344444433322 445555


Q ss_pred             eeCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 039097           63 LDVADPAAIHSVADFIRSHFGKLDILVNNA   92 (290)
Q Consensus        63 ~Dl~~~~~v~~~~~~~~~~~~~id~li~~A   92 (290)
                      ..+++ +.+.+++       ...|++|.+.
T Consensus       104 ~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        104 EKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eecCH-HHHHHHH-------cCCCEEEECC
Confidence            55544 2333333       2578888774

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.57  E-value=0.041  Score=52.75  Aligned_cols=83  Identities=18%  Similarity=0.215  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-------------HHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-------------AAI   71 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-------------~~v   71 (290)
                      .+.+|+|+|+ |.+|...++.+...|+.|+++++++++++.+. ++   +   ..++..|..+.             +..
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-sl---G---A~~v~i~~~e~~~~~~gya~~~s~~~~  235 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SM---G---AEFLELDFEEEGGSGDGYAKVMSEEFI  235 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---C---CeEEEeccccccccccchhhhcchhHH
Confidence            4778999986 68999999999999999999999987655433 23   2   23333333221             111


Q ss_pred             HHHHHHHHhhcCCccEEEEccccC
Q 039097           72 HSVADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        72 ~~~~~~~~~~~~~id~li~~Ag~~   95 (290)
                      ++..+.+.+..+..|++|.++|.-
T Consensus       236 ~~~~~~~~~~~~gaDVVIetag~p  259 (509)
T PRK09424        236 KAEMALFAEQAKEVDIIITTALIP  259 (509)
T ss_pred             HHHHHHHHhccCCCCEEEECCCCC
Confidence            222222233335799999999974

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.57  E-value=0.03  Score=53.53  Aligned_cols=77  Identities=14%  Similarity=0.085  Sum_probs=51.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH-HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-LEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|.|+ |++|.++|+.|.++|++|++.++++... ....+.++..+   +.++..+-..             .
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~g---v~~~~~~~~~-------------~   75 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALG---ATVRLGPGPT-------------L   75 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcC---CEEEECCCcc-------------c
Confidence            466889999997 6799999999999999999998765432 23334454333   3333322111             0


Q ss_pred             cCCccEEEEccccCC
Q 039097           82 FGKLDILVNNAGITG   96 (290)
Q Consensus        82 ~~~id~li~~Ag~~~   96 (290)
                      ....|.||...|+..
T Consensus        76 ~~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         76 PEDTDLVVTSPGWRP   90 (480)
T ss_pred             cCCCCEEEECCCcCC
Confidence            135899999999754

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.56  E-value=0.014  Score=49.10  Aligned_cols=36  Identities=28%  Similarity=0.392  Sum_probs=32.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .++.++++|.|+ ||+|..+|+.|++.|. ++++.|++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            567889999988 7899999999999998 69999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.54  E-value=0.0086  Score=56.61  Aligned_cols=73  Identities=16%  Similarity=0.230  Sum_probs=51.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++|.|+ |.+|+++++.|.++|+.|++.+++++..+...+..      .+.++.+|.++...++++-      ..+.|.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~------~~~a~~   68 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRL------DVRTVVGNGSSPDVLREAG------AEDADL   68 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhc------CEEEEEeCCCCHHHHHHcC------CCcCCE
Confidence            5788887 99999999999999999999999987655543311      2566677777766554430      124566


Q ss_pred             EEEccc
Q 039097           88 LVNNAG   93 (290)
Q Consensus        88 li~~Ag   93 (290)
                      +|....
T Consensus        69 vi~~~~   74 (453)
T PRK09496         69 LIAVTD   74 (453)
T ss_pred             EEEecC
Confidence            655543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.51  E-value=0.014  Score=52.81  Aligned_cols=73  Identities=25%  Similarity=0.387  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|+|.+ |+|...++.....|++|++++|++++.+.+.+-    +.+    +..|-++.+...++.+       .
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd----~~i~~~~~~~~~~~~~-------~  229 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GAD----HVINSSDSDALEAVKE-------I  229 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCc----EEEEcCCchhhHHhHh-------h
Confidence            38999999999 999999998888999999999999887665432    111    3344445554444433       2


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      .|++|.+++
T Consensus       230 ~d~ii~tv~  238 (339)
T COG1064         230 ADAIIDTVG  238 (339)
T ss_pred             CcEEEECCC
Confidence            899999998

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.50  E-value=0.011  Score=52.85  Aligned_cols=40  Identities=20%  Similarity=0.160  Sum_probs=35.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG   43 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~   43 (290)
                      ++.+++++|.|. |++|+.++..|...|++|++.+|++.+.
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~  188 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL  188 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            357899999997 6799999999999999999999996543

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.49  E-value=0.0072  Score=49.38  Aligned_cols=39  Identities=15%  Similarity=0.166  Sum_probs=35.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      .++.+|+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            368899999999977789999999999999999999873

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK04148 hypothetical protein; Provisional

Probab=96.46  E-value=0.0067  Score=47.46  Aligned_cols=56  Identities=18%  Similarity=0.206  Sum_probs=44.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA   69 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   69 (290)
                      +++++++.|.+  .|.++|+.|.+.|+.|+.+|.++...+.+.+.       .+.++..|+.+.+
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~-------~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL-------GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh-------CCeEEECcCCCCC
Confidence            45789999987  88899999999999999999998865554432       2677888887654

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=96.45  E-value=0.011  Score=50.19  Aligned_cols=179  Identities=18%  Similarity=0.066  Sum_probs=117.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++-.+.++-|+++..|.++++.-...++.|.++.|+..+      ++.+.-.+.+.+++.|.-..+-.+....       
T Consensus        50 ve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k------~~l~sw~~~vswh~gnsfssn~~k~~l~-------  116 (283)
T KOG4288|consen   50 VEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENK------QTLSSWPTYVSWHRGNSFSSNPNKLKLS-------  116 (283)
T ss_pred             hhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCc------chhhCCCcccchhhccccccCcchhhhc-------
Confidence            344578899999999999999999999999999999763      3333334567777777765553333322       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      .+-.++.++|-.+                          ....+..+|-.....-.++.    .+.+.++++.||.-..-
T Consensus       117 g~t~v~e~~ggfg--------------------------n~~~m~~ing~ani~a~kaa----~~~gv~~fvyISa~d~~  166 (283)
T KOG4288|consen  117 GPTFVYEMMGGFG--------------------------NIILMDRINGTANINAVKAA----AKAGVPRFVYISAHDFG  166 (283)
T ss_pred             CCcccHHHhcCcc--------------------------chHHHHHhccHhhHHHHHHH----HHcCCceEEEEEhhhcC
Confidence            4556666666432                          22345666777777777777    56677899999875432


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .+.                                           --...|--+|.+.+.=..   ..+ +.|=..+.|
T Consensus       167 ~~~-------------------------------------------~i~rGY~~gKR~AE~Ell---~~~-~~rgiilRP  199 (283)
T KOG4288|consen  167 LPP-------------------------------------------LIPRGYIEGKREAEAELL---KKF-RFRGIILRP  199 (283)
T ss_pred             CCC-------------------------------------------ccchhhhccchHHHHHHH---Hhc-CCCceeecc
Confidence            111                                           011357788877764332   222 244456788


Q ss_pred             ceeecCcccC------------------------------------CCCCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYN------------------------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~------------------------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |++...  +.                                    .+++..|++|..++..+.+|.
T Consensus       200 GFiyg~--R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  200 GFIYGT--RNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             ceeecc--cccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence            888654  22                                    135677888888888888777

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.44  E-value=0.02  Score=53.05  Aligned_cols=82  Identities=20%  Similarity=0.250  Sum_probs=54.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC-------------------cccHHHHHHHHHhcCCC-cEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD-------------------EKGGLEAVEKLKHSGFD-NVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~-~~~~~   61 (290)
                      .+++++|+|.| .||+|..+++.|+..|. +++++|++                   ..+.+.+.+.+....+. ++..+
T Consensus       132 ~l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            35677888885 58999999999999998 79999887                   34555566666555433 34444


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      ...+.+ +.+.++++       ..|+||++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            444432 33333333       5788888776

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.40  E-value=0.013  Score=55.23  Aligned_cols=47  Identities=23%  Similarity=0.338  Sum_probs=39.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l   50 (290)
                      ++.+++++|.|+ |.+|..+++.|...|+ +|++++|+..+..+..+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478899999987 9999999999999997 7999999987766555443

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.39  E-value=0.015  Score=51.61  Aligned_cols=79  Identities=19%  Similarity=0.278  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+++++|+|+++++|.++++.+...|++|++++++++..+.+ .++   +-+    ...+....+....+.+. ... ++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~~-~~~-~~  208 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GAD----IAINYREEDFVEVVKAE-TGG-KG  208 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc----EEEecCchhHHHHHHHH-cCC-CC
Confidence            478999999999999999999999999999998887654432 222   111    11233333333332222 111 25


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.+|+++|
T Consensus       209 ~d~~i~~~~  217 (325)
T TIGR02824       209 VDVILDIVG  217 (325)
T ss_pred             eEEEEECCc
Confidence            999999987

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.39  E-value=0.016  Score=54.51  Aligned_cols=47  Identities=19%  Similarity=0.251  Sum_probs=39.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++.+|+.++..+..+++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~  224 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL  224 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            577899999997 999999999999999 68999999987665555443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.38  E-value=0.011  Score=44.69  Aligned_cols=71  Identities=31%  Similarity=0.327  Sum_probs=52.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEE
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDIL   88 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   88 (290)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..++..++    +   +.++.+|.++++.++++--      .+.+.+
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~---~~~i~gd~~~~~~l~~a~i------~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G---VEVIYGDATDPEVLERAGI------EKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T---SEEEES-TTSHHHHHHTTG------GCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c---cccccccchhhhHHhhcCc------cccCEE
Confidence            466676 5799999999999777999999998775554432    2   7789999999998766522      267777


Q ss_pred             EEccc
Q 039097           89 VNNAG   93 (290)
Q Consensus        89 i~~Ag   93 (290)
                      |....
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            77665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.38  E-value=0.012  Score=52.31  Aligned_cols=37  Identities=22%  Similarity=0.187  Sum_probs=34.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~   39 (290)
                      +++||+++|.|.++-+|+.++..|+++|+.|.++.|.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            5789999999999999999999999999999998874

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.37  E-value=0.033  Score=45.81  Aligned_cols=32  Identities=25%  Similarity=0.319  Sum_probs=27.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      +++|.| .||+|..+++.|+..|. ++++.|.+.
T Consensus         1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            367777 58999999999999998 699998775

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.36  E-value=0.028  Score=50.58  Aligned_cols=117  Identities=14%  Similarity=0.136  Sum_probs=67.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCc--ccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDE--KGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~--~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .++.|+|++|.+|..++..|+..|.  .|++.+|++  ++++.....+.+.   .+...   .+..+..  ... +    
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d--~~~-l----   70 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD--LSD-V----   70 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC--HHH-h----
Confidence            3689999999999999999999986  499999964  4444333333221   11111   1122211  111 2    


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                         ...|++|.++|.-..                      +.+.-.+.++.|+.-...+.+.+.+..   +.+.+|.+++
T Consensus        71 ---~~aDiViitag~p~~----------------------~~~~r~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~n  122 (309)
T cd05294          71 ---AGSDIVIITAGVPRK----------------------EGMSRLDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTN  122 (309)
T ss_pred             ---CCCCEEEEecCCCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCC
Confidence               368999999996321                      111123455556555555555554332   3467777776


Q ss_pred             CC
Q 039097          160 SL  161 (290)
Q Consensus       160 ~~  161 (290)
                      ..
T Consensus       123 pv  124 (309)
T cd05294         123 PV  124 (309)
T ss_pred             ch
Confidence            54

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.33  E-value=0.023  Score=49.88  Aligned_cols=77  Identities=21%  Similarity=0.147  Sum_probs=53.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCC----CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            9 AVVTGANKGIGYEVVRQLALNG----IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.|.|++|.+|..++..|+..|    .+|++.|+++++++....++.......   ....++...+..+.+       ..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~---~~~~i~~~~d~~~~~-------~~   70 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL---ADIKVSITDDPYEAF-------KD   70 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc---cCcEEEECCchHHHh-------CC
Confidence            4689998899999999999999    689999999888777666665433211   111222112222233       36


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|++|..+|..
T Consensus        71 aDiVv~t~~~~   81 (263)
T cd00650          71 ADVVIITAGVG   81 (263)
T ss_pred             CCEEEECCCCC
Confidence            89999999964

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.31  E-value=0.051  Score=42.51  Aligned_cols=79  Identities=23%  Similarity=0.330  Sum_probs=53.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCC-CcEEEEEee
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGF-DNVIFHQLD   64 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~-~~~~~~~~D   64 (290)
                      +++++|.| .|++|..+++.|+..|. ++.+.|.+.                   .+.+.+.+.+.+..+ .++..+..+
T Consensus         2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            45677776 57899999999999998 688887432                   234445555555443 367777777


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           65 VADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        65 l~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 4445555553       5799998765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.30  E-value=0.0058  Score=42.47  Aligned_cols=34  Identities=21%  Similarity=0.295  Sum_probs=23.0

Q ss_pred             CC-cEEEEecCCCchhHH--HHHHHHHCCCeEEEEecC
Q 039097            5 AK-RYAVVTGANKGIGYE--VVRQLALNGIITVLTARD   39 (290)
Q Consensus         5 ~~-k~~lITGgs~gIG~a--ia~~L~~~g~~Vi~~~r~   39 (290)
                      +| |+|||+|+|+|.|++  |+..| ..|++.+-+...
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            45 899999999999999  55555 567888777654

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.30  E-value=0.12  Score=44.84  Aligned_cols=80  Identities=21%  Similarity=0.268  Sum_probs=57.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||--|.||+|..+++.|-..|.++|.+....++.+.+++.    +-.    +..|-+.++-++++.+- . .-..
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~aken----G~~----h~I~y~~eD~v~~V~ki-T-ngKG  215 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKEN----GAE----HPIDYSTEDYVDEVKKI-T-NGKG  215 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhc----CCc----ceeeccchhHHHHHHhc-c-CCCC
Confidence            378999999999999999999999999999999888776655432    211    34555555544444332 1 1236


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++.-..|.
T Consensus       216 Vd~vyDsvG~  225 (336)
T KOG1197|consen  216 VDAVYDSVGK  225 (336)
T ss_pred             ceeeeccccc
Confidence            9998888874

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.27  E-value=0.015  Score=49.90  Aligned_cols=73  Identities=25%  Similarity=0.304  Sum_probs=57.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHH-HHHhcCCCcEEEEEeeCCCHHHHHHH-HHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVE-KLKHSGFDNVIFHQLDVADPAAIHSV-ADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~-~l~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~i   85 (290)
                      .++|. |.|-+|+.+|+.|.++|++|++.+++++..++... ++      ....+.+|-++++-++++ ++       ..
T Consensus         2 ~iiIi-G~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~------~~~~v~gd~t~~~~L~~agi~-------~a   67 (225)
T COG0569           2 KIIII-GAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADEL------DTHVVIGDATDEDVLEEAGID-------DA   67 (225)
T ss_pred             EEEEE-CCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhc------ceEEEEecCCCHHHHHhcCCC-------cC
Confidence            34454 45779999999999999999999999988776443 22      478899999999887766 43       57


Q ss_pred             cEEEEcccc
Q 039097           86 DILVNNAGI   94 (290)
Q Consensus        86 d~li~~Ag~   94 (290)
                      |++|-..|.
T Consensus        68 D~vva~t~~   76 (225)
T COG0569          68 DAVVAATGN   76 (225)
T ss_pred             CEEEEeeCC
Confidence            888887774

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.26  E-value=0.018  Score=51.09  Aligned_cols=80  Identities=15%  Similarity=0.211  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++++++|+|+++++|.++++.+...|++|+.++++..+.+.. .++   +..  .+  .|.........+.+ .... ..
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~--~~--~~~~~~~~~~~~~~-~~~~-~~  213 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA--HV--IVTDEEDLVAEVLR-ITGG-KG  213 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC--EE--EecCCccHHHHHHH-HhCC-CC
Confidence            478999999999999999999999999999999887654433 222   211  11  22222222222222 2211 25


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       214 ~d~vi~~~~~  223 (328)
T cd08268         214 VDVVFDPVGG  223 (328)
T ss_pred             ceEEEECCch
Confidence            9999998883

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.24  E-value=0.0085  Score=57.23  Aligned_cols=46  Identities=15%  Similarity=0.203  Sum_probs=39.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~   49 (290)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..++
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~  374 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR  374 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            467899999996 7999999999999999999999987766655444

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.23  E-value=0.021  Score=51.52  Aligned_cols=74  Identities=16%  Similarity=0.251  Sum_probs=52.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|++++..+..+++.    .  .     +.+.+++.+.+.     
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~--~-----~~~~~~~~~~l~-----  237 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----G--N-----AVPLDELLELLN-----  237 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----C--e-----EEeHHHHHHHHh-----
Confidence            367899999987 999999999999877 478899999877666555542    1  1     112233333333     


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                        ..|++|.+.+..
T Consensus       238 --~aDvVi~at~~~  249 (311)
T cd05213         238 --EADVVISATGAP  249 (311)
T ss_pred             --cCCEEEECCCCC
Confidence              579999999853

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.22  E-value=0.029  Score=51.04  Aligned_cols=76  Identities=17%  Similarity=0.236  Sum_probs=50.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ..+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +++   +..    ...|..+. ++.++    .+..
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~----~vi~~~~~-~~~~~----~~~~  233 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM---GAD----KLVNPQND-DLDHY----KAEK  233 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc---CCc----EEecCCcc-cHHHH----hccC
Confidence            35889999986 8999999999888998 588889887665433 222   222    12343332 23222    2223


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      +.+|++|.++|
T Consensus       234 g~~D~vid~~G  244 (343)
T PRK09880        234 GYFDVSFEVSG  244 (343)
T ss_pred             CCCCEEEECCC
Confidence            56999999998

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.20  E-value=0.018  Score=59.50  Aligned_cols=77  Identities=21%  Similarity=0.258  Sum_probs=61.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC-Ce-------------EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNG-II-------------TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAI   71 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g-~~-------------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v   71 (290)
                      .|+|+|.|+ |.||+.+|+.|++.. +.             |.+.+++.+++++..+..     ..+..+++|++|.+++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~-----~~~~~v~lDv~D~e~L  642 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI-----ENAEAVQLDVSDSESL  642 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc-----CCCceEEeecCCHHHH
Confidence            678999997 999999999999763 33             888899987766655543     1367899999999988


Q ss_pred             HHHHHHHHhhcCCccEEEEccccC
Q 039097           72 HSVADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        72 ~~~~~~~~~~~~~id~li~~Ag~~   95 (290)
                      .++++       .+|+||++....
T Consensus       643 ~~~v~-------~~DaVIsalP~~  659 (1042)
T PLN02819        643 LKYVS-------QVDVVISLLPAS  659 (1042)
T ss_pred             HHhhc-------CCCEEEECCCch
Confidence            77776       489999998753

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.18  E-value=0.019  Score=50.83  Aligned_cols=77  Identities=19%  Similarity=0.267  Sum_probs=55.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++++++|.|+ ||-+++++..|++.|. +|+++.|+.++.++..+.+...+.   .....+..+.+...          
T Consensus       124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~---~~~~~~~~~~~~~~----------  189 (283)
T COG0169         124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGA---AVEAAALADLEGLE----------  189 (283)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc---cccccccccccccc----------
Confidence            45788999986 6789999999999996 799999999998888887765442   11112222222211          


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                       ..|++||+....
T Consensus       190 -~~dliINaTp~G  201 (283)
T COG0169         190 -EADLLINATPVG  201 (283)
T ss_pred             -ccCEEEECCCCC
Confidence             369999998764

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.18  E-value=0.017  Score=51.84  Aligned_cols=78  Identities=19%  Similarity=0.183  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+||+|++|.++++.+...|++|+.+++++++.+...    +.+.+    ...|-.+.+..++ +.++..  +.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~----~~Ga~----~vi~~~~~~~~~~-v~~~~~--~g  211 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK----ELGFD----AVFNYKTVSLEEA-LKEAAP--DG  211 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCC----EEEeCCCccHHHH-HHHHCC--CC
Confidence            4789999999999999999999999999999988876544332    22211    1233333322222 222221  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|+++.+.|
T Consensus       212 vd~vld~~g  220 (329)
T cd08294         212 IDCYFDNVG  220 (329)
T ss_pred             cEEEEECCC
Confidence            999999887

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.12  E-value=0.032  Score=50.45  Aligned_cols=39  Identities=18%  Similarity=0.030  Sum_probs=33.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGL   44 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~   44 (290)
                      +.+++.|.|| |.+|..++..|+..| ..|++.|++++.++
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~   43 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ   43 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence            4678999997 889999999999999 68999999887654

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.11  E-value=0.081  Score=48.20  Aligned_cols=41  Identities=22%  Similarity=0.177  Sum_probs=35.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      .|.+++|.|+ |+||..+++.+...|++|+++++++++.+.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~  206 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM  206 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence            4789999999 9999999999999999999999987765543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.08  E-value=0.066  Score=42.25  Aligned_cols=31  Identities=29%  Similarity=0.456  Sum_probs=26.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      +++|.|. ||+|.++++.|+..|. ++.+.|.+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            3678886 8999999999999998 68888755

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.06  E-value=0.062  Score=50.22  Aligned_cols=43  Identities=28%  Similarity=0.334  Sum_probs=37.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV   47 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~   47 (290)
                      +.|++++|.|++ .||+.+++.+...|++|+++++++.+...+.
T Consensus       200 l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         200 IAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            579999999986 7999999999999999999999987765543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.06  E-value=0.031  Score=46.95  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=29.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++++|+|.| .||+|.++++.|+..|. ++.+.|.+
T Consensus        18 ~L~~s~VlIiG-~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          18 RLRSARILLIG-LKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHhCcEEEEc-CCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            45678889987 55699999999999998 68888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK08223 hypothetical protein; Validated

Probab=96.01  E-value=0.033  Score=49.40  Aligned_cols=37  Identities=22%  Similarity=0.208  Sum_probs=30.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      .+++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            466778888865 6999999999999998 788887653

>PRK05442 malate dehydrogenase; Provisional

Probab=95.98  E-value=0.035  Score=50.31  Aligned_cols=35  Identities=29%  Similarity=0.339  Sum_probs=29.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~   41 (290)
                      +++.|+|++|.+|..+|..|+..+.       .+++.|+++.
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~   46 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPA   46 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCc
Confidence            3789999999999999999998764       6999998643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.97  E-value=0.029  Score=53.03  Aligned_cols=78  Identities=21%  Similarity=0.310  Sum_probs=58.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ...++++|.|+ |.+|+.+++.|.+.|+.|++.+++++..++..++.     ..+.++..|.++.+.++++-      ..
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~L~~~~------~~  296 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-----PNTLVLHGDGTDQELLEEEG------ID  296 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-----CCCeEEECCCCCHHHHHhcC------Cc
Confidence            34678999998 99999999999999999999999987655544432     23667889999987765442      23


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      +.|.+|....
T Consensus       297 ~a~~vi~~~~  306 (453)
T PRK09496        297 EADAFIALTN  306 (453)
T ss_pred             cCCEEEECCC
Confidence            6788876544

>PRK08328 hypothetical protein; Provisional

Probab=95.93  E-value=0.056  Score=46.52  Aligned_cols=37  Identities=27%  Similarity=0.366  Sum_probs=30.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      .+++.+|+|.|+ ||+|.++++.|+..|. +++++|.+.
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            456778888875 6999999999999997 688887553

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.92  E-value=0.025  Score=44.71  Aligned_cols=39  Identities=13%  Similarity=0.089  Sum_probs=36.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      +++||.++|.|.+.-+|..++..|.++|+.|.++.++..
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            688999999999999999999999999999999987654

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PLN02928 oxidoreductase family protein

Probab=95.90  E-value=0.034  Score=50.93  Aligned_cols=38  Identities=21%  Similarity=0.258  Sum_probs=34.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ++.||++.|.|- |.||+++|++|..-|++|+..+|+..
T Consensus       156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            578999999987 89999999999999999999998743

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.85  E-value=0.035  Score=49.53  Aligned_cols=79  Identities=22%  Similarity=0.265  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.+++|+|+++++|.++++.+...|++|+.+++++++.+.. +++   +..    ...|..+.+..+++.+.. . -..
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~~~-~-~~~  211 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GAD----VAVDYTRPDWPDQVREAL-G-GGG  211 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCC----EEEecCCccHHHHHHHHc-C-CCC
Confidence            467899999999999999999999999999998887654433 322   211    123333333333332221 1 125


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.++++.|
T Consensus       212 ~d~vl~~~g  220 (324)
T cd08244         212 VTVVLDGVG  220 (324)
T ss_pred             ceEEEECCC
Confidence            999999987

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.85  E-value=0.062  Score=49.64  Aligned_cols=36  Identities=28%  Similarity=0.443  Sum_probs=30.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            456778888875 6999999999999997 78888865

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.84  E-value=0.062  Score=43.51  Aligned_cols=85  Identities=18%  Similarity=0.103  Sum_probs=55.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC------CcEEEEEeeCCCHHHHHHHHHH--HH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF------DNVIFHQLDVADPAAIHSVADF--IR   79 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~v~~~~~~--~~   79 (290)
                      ++-+.|- |-+|..+|++|+++|+.|++.+|++++.++..+.-.....      ....++-.=+.+.+++++++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            4556665 7999999999999999999999998777665543211000      1245566667888889998887  65


Q ss_pred             hhcCCccEEEEccc
Q 039097           80 SHFGKLDILVNNAG   93 (290)
Q Consensus        80 ~~~~~id~li~~Ag   93 (290)
                      ....+=.++|...-
T Consensus        82 ~~l~~g~iiid~sT   95 (163)
T PF03446_consen   82 AGLRPGKIIIDMST   95 (163)
T ss_dssp             GGS-TTEEEEE-SS
T ss_pred             hccccceEEEecCC
Confidence            55444445554444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=95.82  E-value=0.088  Score=44.20  Aligned_cols=36  Identities=22%  Similarity=0.430  Sum_probs=29.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++.+|+|.|.+| +|.++++.|+..|. ++.++|.+
T Consensus        16 ~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          16 KLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            35667888887665 99999999999998 58888754

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.82  E-value=0.065  Score=46.43  Aligned_cols=36  Identities=22%  Similarity=0.316  Sum_probs=29.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++.+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            356778888865 6999999999999997 68887765

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=95.81  E-value=0.058  Score=48.52  Aligned_cols=31  Identities=35%  Similarity=0.578  Sum_probs=26.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      +|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            3677775 8999999999999998 68888754

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PLN00203 glutamyl-tRNA reductase

Probab=95.80  E-value=0.035  Score=53.47  Aligned_cols=76  Identities=20%  Similarity=0.232  Sum_probs=53.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.+++++|.|+ |.+|..+++.|...|+ +|+++.|+.++.+...+++.   +..+.     +...++..+.+.      
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~-----~~~~~dl~~al~------  328 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEII-----YKPLDEMLACAA------  328 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceE-----eecHhhHHHHHh------
Confidence            77899999999 9999999999999997 69999999887766655442   11111     122223333333      


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                       ..|+||.+.+..
T Consensus       329 -~aDVVIsAT~s~  340 (519)
T PLN00203        329 -EADVVFTSTSSE  340 (519)
T ss_pred             -cCCEEEEccCCC
Confidence             579999887643

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.80  E-value=0.037  Score=50.02  Aligned_cols=78  Identities=15%  Similarity=0.211  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+++|+|+ |++|..+++.+...|++ |+++++++++.+.+ +++   +.+    ..+|..+.+ .+++.+ +... .
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~----~~i~~~~~~-~~~~~~-~~~~-~  230 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GAD----FVINSGQDD-VQEIRE-LTSG-A  230 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC----EEEcCCcch-HHHHHH-HhCC-C
Confidence            4789999976 89999999999999998 99988887665433 333   211    223444433 333322 2111 2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.+.|.
T Consensus       231 ~~d~vid~~g~  241 (339)
T cd08239         231 GADVAIECSGN  241 (339)
T ss_pred             CCCEEEECCCC
Confidence            69999999883

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.74  E-value=0.045  Score=51.34  Aligned_cols=41  Identities=24%  Similarity=0.280  Sum_probs=36.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      +.|++++|.|. |.||+.+|+.|...|++|+++++++.+..+
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            57999999997 689999999999999999999998866443

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=95.72  E-value=0.055  Score=47.58  Aligned_cols=83  Identities=22%  Similarity=0.252  Sum_probs=65.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |-+++=-||++++|.++.+.....|++-+-+.|+....+++.++++..+.+.+      +++++--.+-..+...+.+++
T Consensus       161 GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~V------iTeeel~~~~~~k~~~~~~~p  234 (354)
T KOG0025|consen  161 GDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEV------ITEEELRDRKMKKFKGDNPRP  234 (354)
T ss_pred             CCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceE------ecHHHhcchhhhhhhccCCCc
Confidence            66888889999999999999999999999999999999999999988664432      233333333344444467789


Q ss_pred             cEEEEcccc
Q 039097           86 DILVNNAGI   94 (290)
Q Consensus        86 d~li~~Ag~   94 (290)
                      -.-+||.|-
T Consensus       235 rLalNcVGG  243 (354)
T KOG0025|consen  235 RLALNCVGG  243 (354)
T ss_pred             eEEEeccCc
Confidence            999999985

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.71  E-value=0.1  Score=49.23  Aligned_cols=74  Identities=16%  Similarity=0.064  Sum_probs=53.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-------CC--eEEEEecCcccHHHHHHHHHhcC-C--CcEEEEEeeCCCHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-------GI--ITVLTARDEKGGLEAVEKLKHSG-F--DNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-------g~--~Vi~~~r~~~~~~~~~~~l~~~~-~--~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      +|.|+|++|.+|.++|-.|+..       +.  ++++.+++.++++...-++.+.. .  ..+.+. .  .+.+      
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~--~~ye------  172 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-I--DPYE------  172 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-c--CCHH------
Confidence            6899999999999999999988       75  79999999999887776665533 1  112111 1  1211      


Q ss_pred             HHHHhhcCCccEEEEccccC
Q 039097           76 DFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~   95 (290)
                           .+..-|++|..||.-
T Consensus       173 -----~~kdaDiVVitAG~p  187 (444)
T PLN00112        173 -----VFQDAEWALLIGAKP  187 (444)
T ss_pred             -----HhCcCCEEEECCCCC
Confidence                 124689999999973

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.66  E-value=0.028  Score=46.49  Aligned_cols=43  Identities=21%  Similarity=0.234  Sum_probs=35.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK   51 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~   51 (290)
                      +|.|.|+ |.+|+.+|..|+..|++|++.+++++.++...+.+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~   43 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE   43 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence            4677887 999999999999999999999999988877666554

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.59  E-value=0.16  Score=45.83  Aligned_cols=76  Identities=17%  Similarity=0.183  Sum_probs=52.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..++.|+|+ |.+|.++|..|+..|.  .+++.+++++.++....++.....  ....+...  .|.+       .    
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~----   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V----   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H----
Confidence            347899996 9999999999999985  799999998877666666654331  11122211  1221       1    


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      +...|++|.+||..
T Consensus        69 ~~~adivvitaG~~   82 (312)
T cd05293          69 TANSKVVIVTAGAR   82 (312)
T ss_pred             hCCCCEEEECCCCC
Confidence            23689999999974

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.59  E-value=0.03  Score=47.73  Aligned_cols=42  Identities=26%  Similarity=0.268  Sum_probs=36.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~   49 (290)
                      ++.|.||+|.+|.+++..|++.|++|++.+|++++.+...+.
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            588999999999999999999999999999998776665443

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.59  E-value=0.066  Score=46.11  Aligned_cols=84  Identities=17%  Similarity=0.151  Sum_probs=52.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEE
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIF   60 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~   60 (290)
                      ..+++.+++|.|. ||+|.++++.|++.|. +++++|.+.                   .+.+.+.+.+....+. ++..
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~   85 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDA   85 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            3567788888865 6999999999999997 788887553                   2233334444444432 3444


Q ss_pred             EEeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           61 HQLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        61 ~~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      +...++. +...+++.      .++|++|.+..
T Consensus        86 ~~~~i~~-~~~~~l~~------~~~D~VvdaiD  111 (231)
T cd00755          86 VEEFLTP-DNSEDLLG------GDPDFVVDAID  111 (231)
T ss_pred             eeeecCH-hHHHHHhc------CCCCEEEEcCC
Confidence            4444442 33333332      25788887755

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.59  E-value=0.059  Score=48.52  Aligned_cols=76  Identities=22%  Similarity=0.225  Sum_probs=47.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++.|+|++|.+|.++|..|+.++.  ++++.|++  +++...-++.+.... ..+..+.  ..+++.       +.+...
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~-~~i~~~~--~~~~~y-------~~~~da   69 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTP-AKVTGYL--GPEELK-------KALKGA   69 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCc-ceEEEec--CCCchH-------HhcCCC
Confidence            688999999999999999999984  79999988  333322333332211 1111110  111111       123478


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |++|.+||.-
T Consensus        70 DivvitaG~~   79 (310)
T cd01337          70 DVVVIPAGVP   79 (310)
T ss_pred             CEEEEeCCCC
Confidence            9999999973

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.56  E-value=0.09  Score=47.62  Aligned_cols=43  Identities=19%  Similarity=0.137  Sum_probs=36.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGL   44 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~   44 (290)
                      |-..+.+++.|.| +|.+|..+|..++..|. .|++.|++++.++
T Consensus         1 ~~~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~   44 (321)
T PTZ00082          1 MTMIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ   44 (321)
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhh
Confidence            4556678999999 58899999999999995 8999999987653

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.55  E-value=0.069  Score=49.10  Aligned_cols=79  Identities=22%  Similarity=0.198  Sum_probs=52.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|.+++|+|+ |+||..+++.+...|+ +|+.+++++++.+.+ +++   +..    ...|..+ .+++.+.+.++..  
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~---Ga~----~~i~~~~~~~~~~~~v~~~~~--  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL---GAT----DCVNPNDYDKPIQEVIVEITD--  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCC----eEEcccccchhHHHHHHHHhC--
Confidence            4789999975 9999999999888998 799998887765543 232   211    1223332 2233333333332  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       254 ~g~d~vid~~G~  265 (368)
T TIGR02818       254 GGVDYSFECIGN  265 (368)
T ss_pred             CCCCEEEECCCC
Confidence            369999999983

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.52  E-value=0.037  Score=49.08  Aligned_cols=37  Identities=19%  Similarity=0.220  Sum_probs=34.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~   39 (290)
                      +++||+++|.|.+.-+|+.++..|.++|+.|.++.++
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            5889999999999999999999999999999998875

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.50  E-value=0.087  Score=46.34  Aligned_cols=37  Identities=30%  Similarity=0.296  Sum_probs=30.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      ..+++.+|+|.|+ ||+|.++|+.|+..|. ++.++|.+
T Consensus        26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3467788888865 6999999999999995 78888755

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.49  E-value=0.12  Score=46.93  Aligned_cols=77  Identities=18%  Similarity=0.223  Sum_probs=48.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCc--ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDE--KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++.|+|++|.+|.++|..|+..+.       .+++.|+++  ++++....++.+.......  ..-++. ++    .+  
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~--~~~i~~-~~----~~--   75 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA--GVVATT-DP----EE--   75 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC--CcEEec-Ch----HH--
Confidence            689999999999999999998884       699999965  3355444444432200000  001110 11    11  


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                        .+..-|++|..||..
T Consensus        76 --~~~daDvVVitAG~~   90 (323)
T TIGR01759        76 --AFKDVDAALLVGAFP   90 (323)
T ss_pred             --HhCCCCEEEEeCCCC
Confidence              223679999999973

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.46  E-value=0.12  Score=47.47  Aligned_cols=74  Identities=22%  Similarity=0.353  Sum_probs=48.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|.|+ |+||..+++.+...|++|++++.+.++..+..+++   +.+    ..+|..+.+.+.+       ..+.
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~---Ga~----~vi~~~~~~~~~~-------~~~~  247 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRL---GAD----SFLVSTDPEKMKA-------AIGT  247 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhC---CCc----EEEcCCCHHHHHh-------hcCC
Confidence            5789999665 99999999999999999988887766544443333   211    1123333322222       1236


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.+.|
T Consensus       248 ~D~vid~~g  256 (360)
T PLN02586        248 MDYIIDTVS  256 (360)
T ss_pred             CCEEEECCC
Confidence            899999888

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.46  E-value=0.067  Score=47.74  Aligned_cols=74  Identities=19%  Similarity=0.288  Sum_probs=54.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC-CHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA-DPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~   83 (290)
                      .|+++.|+|++| ||.--++.--+-|++|++.++...+-+++.+.+   +.+    +-+|.+ |.+.++++.+.      
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L---GAd----~fv~~~~d~d~~~~~~~~------  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL---GAD----VFVDSTEDPDIMKAIMKT------  246 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc---Ccc----eeEEecCCHHHHHHHHHh------
Confidence            589999999998 998766666666999999999988888877766   222    346677 66666666553      


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                       .|.+++++-
T Consensus       247 -~dg~~~~v~  255 (360)
T KOG0023|consen  247 -TDGGIDTVS  255 (360)
T ss_pred             -hcCcceeee
Confidence             466666554

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.45  E-value=0.06  Score=48.05  Aligned_cols=78  Identities=17%  Similarity=0.125  Sum_probs=56.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.||++.|.|.++-+|+.+|..|+++|+.|.+..|+....++..++        ..++..=+.+.+.+.+.+       
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~--------ADIVIsavg~~~~v~~~~-------  220 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ--------ADIVVAAVGRPRLIDADW-------  220 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc--------CCEEEEecCChhcccHhh-------
Confidence            67899999999999999999999999999999998876655544432        334444455555554433       


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      -+...+|-..|+.
T Consensus       221 ik~GaiVIDvgin  233 (301)
T PRK14194        221 LKPGAVVIDVGIN  233 (301)
T ss_pred             ccCCcEEEEeccc
Confidence            1455666666754

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=95.43  E-value=0.12  Score=44.67  Aligned_cols=31  Identities=32%  Similarity=0.552  Sum_probs=25.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            9 AVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      ++|.| .||+|.++++.|+..|. ++.++|.+.
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~   33 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDT   33 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            56666 78999999999999998 688887653

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=95.39  E-value=0.16  Score=45.57  Aligned_cols=58  Identities=19%  Similarity=0.173  Sum_probs=38.7

Q ss_pred             hHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           19 GYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        19 G~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      |.++|++|++.|+.|++.+|++...+ +..+.+...+.        ...+  +..++++       ..|++|.+-.
T Consensus        32 GspMArnLlkAGheV~V~Drnrsa~e~e~~e~LaeaGA--------~~Aa--S~aEAAa-------~ADVVIL~LP   90 (341)
T TIGR01724        32 GSRMAIEFAMAGHDVVLAEPNREFMSDDLWKKVEDAGV--------KVVS--DDKEAAK-------HGEIHVLFTP   90 (341)
T ss_pred             HHHHHHHHHHCCCEEEEEeCChhhhhhhhhHHHHHCCC--------eecC--CHHHHHh-------CCCEEEEecC
Confidence            89999999999999999999876543 33334443331        1111  3344554       4699998876

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.37  E-value=0.051  Score=42.25  Aligned_cols=87  Identities=22%  Similarity=0.229  Sum_probs=54.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcC-------CCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSG-------FDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      -++-|.|+ |.+|.++++.|.+.|+.|..+ +|+....+.+...+....       -....++-+-+.|. .+.++++++
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~L   88 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQL   88 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHH
Confidence            36788887 889999999999999998766 566655555544432110       11344455555554 889999998


Q ss_pred             Hhh--cCCccEEEEccccC
Q 039097           79 RSH--FGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~--~~~id~li~~Ag~~   95 (290)
                      ...  ..+=.+++|+.|-.
T Consensus        89 a~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   89 AQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HCC--S-TT-EEEES-SS-
T ss_pred             HHhccCCCCcEEEECCCCC
Confidence            875  33346999999965

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.36  E-value=0.066  Score=50.61  Aligned_cols=38  Identities=32%  Similarity=0.444  Sum_probs=33.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      ++.|.||.|.+|.++|+.|.+.|++|++.+|+++...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~   39 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKE   39 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHH
Confidence            68999999999999999999999999999998766433

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.36  E-value=0.079  Score=47.18  Aligned_cols=79  Identities=16%  Similarity=0.225  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.+++|.|+++++|.++++.+...|++|++++++.++.+.+ +++   +-+    ...|..+.....+ +.+... -..
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~-~~~~~~-~~~  207 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GAD----EVIDSSPEDLAQR-VKEATG-GAG  207 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCC----EEecccchhHHHH-HHHHhc-CCC
Confidence            467999999999999999999999999999998887654433 222   211    1222233222222 222211 126


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.++.+.|
T Consensus       208 ~d~vl~~~g  216 (323)
T cd05282         208 ARLALDAVG  216 (323)
T ss_pred             ceEEEECCC
Confidence            999999887

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PRK14851 hypothetical protein; Provisional

Probab=95.35  E-value=0.11  Score=51.59  Aligned_cols=81  Identities=12%  Similarity=0.120  Sum_probs=51.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCC-CcEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGF-DNVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~-~~~~~~   61 (290)
                      .+++.+|+|.| .||+|..+++.|+..|. +++++|.+.                   .|.+.+.+.+.+..+ -++..+
T Consensus        40 kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            46678999998 77999999999999998 687876432                   223333444444332 255666


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNA   92 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~A   92 (290)
                      ...++ .+.+.++++       ++|+||.+.
T Consensus       119 ~~~i~-~~n~~~~l~-------~~DvVid~~  141 (679)
T PRK14851        119 PAGIN-ADNMDAFLD-------GVDVVLDGL  141 (679)
T ss_pred             ecCCC-hHHHHHHHh-------CCCEEEECC
Confidence            66664 334444444       456666444

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.34  E-value=0.081  Score=48.61  Aligned_cols=78  Identities=18%  Similarity=0.175  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .|.++||.|+ |+||..+++.+...|+ +|+.+++++++.+.+ +++   +.+    ...|..+. +++.+.+.++..  
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~----~~i~~~~~~~~~~~~v~~~~~--  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GAT----DCVNPKDHDKPIQQVLVEMTD--  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCC----EEEcccccchHHHHHHHHHhC--
Confidence            4789999975 8999999999999999 699999988765543 332   211    12344332 234444444433  


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      +.+|++|.+.|
T Consensus       255 ~g~d~vid~~g  265 (368)
T cd08300         255 GGVDYTFECIG  265 (368)
T ss_pred             CCCcEEEECCC
Confidence            36999999988

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.32  E-value=0.099  Score=47.70  Aligned_cols=76  Identities=20%  Similarity=0.373  Sum_probs=47.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|+|+ |++|...++.+...|++|++++|+.... +..+.+++.+   ...  +|..+. ++.+ .    ...+.
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~-~~~~~~~~~G---a~~--v~~~~~-~~~~-~----~~~~~  238 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPD-PKADIVEELG---ATY--VNSSKT-PVAE-V----KLVGE  238 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHcC---CEE--ecCCcc-chhh-h----hhcCC
Confidence            5789999985 9999999998888999999999853111 1111222222   122  243332 2222 1    12247


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.+.|
T Consensus       239 ~d~vid~~g  247 (355)
T cd08230         239 FDLIIEATG  247 (355)
T ss_pred             CCEEEECcC
Confidence            999999998

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PLN02740 Alcohol dehydrogenase-like

Probab=95.31  E-value=0.083  Score=48.84  Aligned_cols=79  Identities=14%  Similarity=0.169  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .|.+++|.|+ |+||..+++.+...|+ +|+++++++++.+.+ +++   +.+    ...|..+. +++.+.+.++... 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~----~~i~~~~~~~~~~~~v~~~~~~-  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM---GIT----DFINPKDSDKPVHERIREMTGG-  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc---CCc----EEEecccccchHHHHHHHHhCC-
Confidence            4789999985 9999999999999998 699999887765544 222   211    12244332 2333334433322 


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                       .+|++|.+.|.
T Consensus       268 -g~dvvid~~G~  278 (381)
T PLN02740        268 -GVDYSFECAGN  278 (381)
T ss_pred             -CCCEEEECCCC
Confidence             69999999993

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.31  E-value=0.25  Score=47.18  Aligned_cols=39  Identities=18%  Similarity=0.189  Sum_probs=33.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      .+.+|+++|.| .|+.|+++|+.|.+.|+.|.+.+++...
T Consensus        12 ~~~~~~v~v~G-~G~sG~a~a~~L~~~G~~V~~~D~~~~~   50 (473)
T PRK00141         12 QELSGRVLVAG-AGVSGRGIAAMLSELGCDVVVADDNETA   50 (473)
T ss_pred             cccCCeEEEEc-cCHHHHHHHHHHHHCCCEEEEECCChHH
Confidence            46678899998 7789999999999999999999987543

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.29  E-value=0.014  Score=43.49  Aligned_cols=38  Identities=13%  Similarity=0.155  Sum_probs=32.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      -+++||++||.|| |.+|..=++.|++.|++|.+.+...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4789999999999 8999999999999999999999886

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.26  E-value=0.096  Score=46.41  Aligned_cols=76  Identities=21%  Similarity=0.267  Sum_probs=50.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|.|+++++|.++++.+...|++|+.+++++++.+.+ .++   +-+.+  +. +  .. +..+.+.+.   -.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~--~~-~--~~-~~~~~i~~~---~~~  208 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KEL---GADEV--VI-D--DG-AIAEQLRAA---PGG  208 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc---CCcEE--Ee-c--Cc-cHHHHHHHh---CCC
Confidence            478999999999999999999999999999998887654333 222   21111  11 1  21 222222222   236


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.++.+.|
T Consensus       209 ~d~vl~~~~  217 (320)
T cd08243         209 FDKVLELVG  217 (320)
T ss_pred             ceEEEECCC
Confidence            999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PLN02602 lactate dehydrogenase

Probab=95.26  E-value=0.15  Score=46.76  Aligned_cols=75  Identities=13%  Similarity=0.159  Sum_probs=52.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++.|+|+ |.+|.++|..|+.++.  ++++.|+++++++....++.....  ....+.. + .+.       +.    +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~dy-------~~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TDY-------AV----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CCH-------HH----h
Confidence            68999996 9999999999999885  699999998877766666654321  1122211 0 121       11    2


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||..
T Consensus       104 ~daDiVVitAG~~  116 (350)
T PLN02602        104 AGSDLCIVTAGAR  116 (350)
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999974

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.24  E-value=0.084  Score=47.10  Aligned_cols=80  Identities=16%  Similarity=0.227  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|.|+++++|.++++.+...|++|+++.++.++.+...+ +   +-+  .+  .+-.+. +..+.+.+.... ..
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~--~~--~~~~~~-~~~~~i~~~~~~-~~  208 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG--PV--VSTEQP-GWQDKVREAAGG-AP  208 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC--EE--EcCCCc-hHHHHHHHHhCC-CC
Confidence            47899999999999999999999999999999888765444322 2   211  11  122222 222222222221 25


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|.++.+.|.
T Consensus       209 ~d~v~d~~g~  218 (324)
T cd08292         209 ISVALDSVGG  218 (324)
T ss_pred             CcEEEECCCC
Confidence            9999998883

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.23  E-value=0.12  Score=46.49  Aligned_cols=77  Identities=21%  Similarity=0.239  Sum_probs=47.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++++++||+|++|..+++.....|++|+.+++++++.+.+. +   .+.+  .  ..|..+.+..++ +.++... ..+|
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~---~g~~--~--~i~~~~~~~~~~-v~~~~~~-~~~d  214 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-K---IGAE--Y--VLNSSDPDFLED-LKELIAK-LNAT  214 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCc--E--EEECCCccHHHH-HHHHhCC-CCCc
Confidence            44555699999999999888888999999988876544432 2   2211  1  223333222222 2222211 2699


Q ss_pred             EEEEccc
Q 039097           87 ILVNNAG   93 (290)
Q Consensus        87 ~li~~Ag   93 (290)
                      ++|.+.|
T Consensus       215 ~vid~~g  221 (324)
T cd08291         215 IFFDAVG  221 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.22  E-value=0.045  Score=44.32  Aligned_cols=43  Identities=19%  Similarity=0.199  Sum_probs=34.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      +++||+++|.|.+.-+|+-++..|.++|+.|.++..+...+++
T Consensus        33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            5889999999999999999999999999999998877654443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.22  E-value=0.12  Score=46.25  Aligned_cols=80  Identities=13%  Similarity=0.187  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.+++|.|+++++|.++++.+...|++++++.+++++.+.+ .++   +- .   ...|..+.+...+.+.+.... ..
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~-~---~~~~~~~~~~~~~~~~~~~~~-~~  210 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKL---AA-I---ILIRYPDEEGFAPKVKKLTGE-KG  210 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CC-c---EEEecCChhHHHHHHHHHhCC-CC
Confidence            467999999999999999999999999988888876654443 222   21 1   122333322122222222211 25


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.+|++.|
T Consensus       211 ~d~~i~~~~  219 (334)
T PTZ00354        211 VNLVLDCVG  219 (334)
T ss_pred             ceEEEECCc
Confidence            999999876

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.17  E-value=0.046  Score=46.09  Aligned_cols=38  Identities=13%  Similarity=0.156  Sum_probs=34.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      -+++||.+||.|| |.+|...++.|++.|++|+++++..
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4689999999998 8999999999999999999998754

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=95.14  E-value=0.14  Score=46.23  Aligned_cols=83  Identities=24%  Similarity=0.290  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH--HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP--AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~   82 (290)
                      .+++++|.|+++++|.++++.+...|++|++++++.+..++..+.+...+.+ . +  ++-.+.  .+..+.+...... 
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~-~-~--~~~~~~~~~~~~~~i~~~~~~-  220 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGAD-H-V--LTEEELRSLLATELLKSAPGG-  220 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCC-E-E--EeCcccccccHHHHHHHHcCC-
Confidence            5789999999999999999999999999998888764322323333222222 1 1  122211  1222333322221 


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                       .+|.++.+.|
T Consensus       221 -~~d~vld~~g  230 (341)
T cd08290         221 -RPKLALNCVG  230 (341)
T ss_pred             -CceEEEECcC
Confidence             5899999888

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.13  E-value=0.33  Score=43.67  Aligned_cols=73  Identities=26%  Similarity=0.220  Sum_probs=51.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC----CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG----FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++.|.|+ |.||..+|..|+.++.  ++++.|+++++++....++....    ..++.+...   +       .+.    
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~-------y~~----   65 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D-------YDD----   65 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C-------HHH----
Confidence            3678888 9999999999999985  69999999887776666665532    113333332   2       222    


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      +..-|++|..||..
T Consensus        66 ~~~aDivvitaG~~   79 (307)
T cd05290          66 CADADIIVITAGPS   79 (307)
T ss_pred             hCCCCEEEECCCCC
Confidence            23689999999974

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.12  E-value=0.047  Score=45.92  Aligned_cols=42  Identities=17%  Similarity=0.134  Sum_probs=32.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKL   50 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l   50 (290)
                      ....||+|.||.++|++|+..|++|++..|+.++ .+.+.+.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l   45 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL   45 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence            4567889999999999999999999999666554 44444444

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.12  E-value=0.12  Score=48.40  Aligned_cols=87  Identities=10%  Similarity=0.056  Sum_probs=52.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |.+++|.||+|+||..+++.+...|+   +|+++++++++.+.+.+...... .........|..+.+++.+.+.++...
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g  255 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGG  255 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCC
Confidence            67999999999999999887777654   79999999877665443211000 000111223433323333333333221


Q ss_pred             cCCccEEEEccc
Q 039097           82 FGKLDILVNNAG   93 (290)
Q Consensus        82 ~~~id~li~~Ag   93 (290)
                       ..+|.+|.+.|
T Consensus       256 -~g~D~vid~~g  266 (410)
T cd08238         256 -QGFDDVFVFVP  266 (410)
T ss_pred             -CCCCEEEEcCC
Confidence             25899999887

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.10  E-value=0.092  Score=46.85  Aligned_cols=78  Identities=17%  Similarity=0.124  Sum_probs=55.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++||+++|.|-++-+|+.+|..|+++|+.|.++. |+. .+++..+        +..++.+=+.+.+.+.+.+      
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-~l~e~~~--------~ADIVIsavg~~~~v~~~~------  219 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-DLPAVCR--------RADILVAAVGRPEMVKGDW------  219 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-CHHHHHh--------cCCEEEEecCChhhcchhe------
Confidence            57899999999999999999999999999999995 654 3333222        2344555556666555443      


Q ss_pred             cCCccEEEEccccCC
Q 039097           82 FGKLDILVNNAGITG   96 (290)
Q Consensus        82 ~~~id~li~~Ag~~~   96 (290)
                       =+...+|-..|+..
T Consensus       220 -lk~GavVIDvGin~  233 (296)
T PRK14188        220 -IKPGATVIDVGINR  233 (296)
T ss_pred             -ecCCCEEEEcCCcc
Confidence             14566777777653

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.09  E-value=0.11  Score=46.82  Aligned_cols=79  Identities=20%  Similarity=0.249  Sum_probs=51.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.++||.|+++++|.++++.+.+.|++|+.+++++++.+.. +++   +.+    ..++..+.+..+++.+.. . -+.
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~----~v~~~~~~~~~~~~~~~~-~-~~~  234 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GAD----AFVDFKKSDDVEAVKELT-G-GGG  234 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCc----EEEcCCCccHHHHHHHHh-c-CCC
Confidence            468999999999999999999999999999999987654432 332   211    112333333333332221 1 136


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.++++.+
T Consensus       235 vd~vl~~~~  243 (341)
T cd08297         235 AHAVVVTAV  243 (341)
T ss_pred             CCEEEEcCC
Confidence            999998665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.08  E-value=0.089  Score=47.14  Aligned_cols=78  Identities=19%  Similarity=0.204  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.+++|.|+++.+|.++++.+...|++|+.+++++++.+.. +++   +.+  .+  .|..+ .+..+.+.....  +.
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~--~v--~~~~~-~~~~~~~~~~~~--~~  207 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCD--RP--INYKT-EDLGEVLKKEYP--KG  207 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCc--eE--EeCCC-ccHHHHHHHhcC--CC
Confidence            478999999999999999999999999999998886654433 222   211  11  23222 223333333222  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.+|++.|
T Consensus       208 vd~v~~~~g  216 (329)
T cd08250         208 VDVVYESVG  216 (329)
T ss_pred             CeEEEECCc
Confidence            999999877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.07  E-value=0.17  Score=45.79  Aligned_cols=75  Identities=21%  Similarity=0.393  Sum_probs=49.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|+|+++++|.++++.....|++|+.+.++ .+ .+..+++   +..    ..+|..+.+...++    ... +.
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~---g~~----~~~~~~~~~~~~~l----~~~-~~  227 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSL---GAD----DVIDYNNEDFEEEL----TER-GK  227 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHh---CCc----eEEECCChhHHHHH----Hhc-CC
Confidence            48899999999999999999999999998887764 22 2222322   211    22344333333222    222 47


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.+|.+.|
T Consensus       228 vd~vi~~~g  236 (350)
T cd08248         228 FDVILDTVG  236 (350)
T ss_pred             CCEEEECCC
Confidence            999999887

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.07  E-value=0.1  Score=46.00  Aligned_cols=41  Identities=17%  Similarity=0.142  Sum_probs=35.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      ++++++|.|+++++|.++++.+...|++|+.+++++++.+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  176 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAEL  176 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence            57899999999999999999999999999999887765443

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.04  E-value=0.059  Score=47.93  Aligned_cols=42  Identities=17%  Similarity=0.188  Sum_probs=35.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      +|.|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+
T Consensus         7 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i   48 (286)
T PRK07819          7 RVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI   48 (286)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence            5666666 79999999999999999999999998887755554

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.02  E-value=0.094  Score=46.31  Aligned_cols=41  Identities=22%  Similarity=0.222  Sum_probs=35.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      .+.+++|+|+++++|.++++.+...|+.|+.++++.++.+.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  179 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLAL  179 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHH
Confidence            47899999999999999999999999999999888655443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.01  E-value=0.12  Score=37.01  Aligned_cols=35  Identities=31%  Similarity=0.373  Sum_probs=30.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEec
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALN-GIITVLTAR   38 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r   38 (290)
                      ++.+|+++|.|. |++|+.++..|.+. +.+|.+.+|
T Consensus        20 ~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          20 SLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            477899999999 99999999999999 467888777

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.00  E-value=0.11  Score=46.93  Aligned_cols=33  Identities=27%  Similarity=0.195  Sum_probs=29.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDE   40 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~   40 (290)
                      ++.|+|++|.||.++|..|+..+.  .+++.|+++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~   35 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG   35 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence            478999999999999999999885  799999986

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.97  E-value=0.13  Score=47.24  Aligned_cols=79  Identities=15%  Similarity=0.199  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .|.+++|.|+ |+||..+++.+...|+ +|+++++++++.+.+ +++   +..    ..+|..+. +++.+.+.++..  
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~---Ga~----~~i~~~~~~~~~~~~v~~~~~--  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF---GVT----EFVNPKDHDKPVQEVIAEMTG--  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc----eEEcccccchhHHHHHHHHhC--
Confidence            4789999985 8999999999988998 799999987665433 222   211    11233321 234444444433  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.+.|.
T Consensus       256 ~~~d~vid~~G~  267 (369)
T cd08301         256 GGVDYSFECTGN  267 (369)
T ss_pred             CCCCEEEECCCC
Confidence            269999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=94.97  E-value=0.054  Score=44.60  Aligned_cols=70  Identities=21%  Similarity=0.253  Sum_probs=48.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+++.|.|- |.||+++|++|..-|++|+..+|+...... ....   .   +        ...++++++.+     
T Consensus        33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~~---~---~--------~~~~l~ell~~-----   91 (178)
T PF02826_consen   33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG-ADEF---G---V--------EYVSLDELLAQ-----   91 (178)
T ss_dssp             -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HHHT---T---E--------EESSHHHHHHH-----
T ss_pred             ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh-cccc---c---c--------eeeehhhhcch-----
Confidence            578999999975 899999999999999999999999875441 1111   0   1        11244556663     


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                        .|+|++.....
T Consensus        92 --aDiv~~~~plt  102 (178)
T PF02826_consen   92 --ADIVSLHLPLT  102 (178)
T ss_dssp             ---SEEEE-SSSS
T ss_pred             --hhhhhhhhccc
Confidence              59999888754

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.96  E-value=0.16  Score=44.69  Aligned_cols=40  Identities=20%  Similarity=0.173  Sum_probs=32.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGL   44 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~   44 (290)
                      ..+++++|.|+ |+||..+++.+...|++ |+++++++.+.+
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~  159 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE  159 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence            35789999986 89999999999889986 888777765543

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=94.96  E-value=0.19  Score=38.56  Aligned_cols=65  Identities=28%  Similarity=0.436  Sum_probs=44.5

Q ss_pred             chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC--CccEEEEccc
Q 039097           17 GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG--KLDILVNNAG   93 (290)
Q Consensus        17 gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~id~li~~Ag   93 (290)
                      |||...++.+...|++|+++++++.+.+.+ +++   +..    ..+|-.+.+    +.+++.+..+  ++|++|.++|
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~---Ga~----~~~~~~~~~----~~~~i~~~~~~~~~d~vid~~g   67 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KEL---GAD----HVIDYSDDD----FVEQIRELTGGRGVDVVIDCVG   67 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHT---TES----EEEETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-Hhh---ccc----ccccccccc----cccccccccccccceEEEEecC
Confidence            689999999999999999999997765433 222   211    234555444    3444444333  6999999999

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK07877 hypothetical protein; Provisional

Probab=94.95  E-value=0.14  Score=51.27  Aligned_cols=35  Identities=23%  Similarity=0.284  Sum_probs=30.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~   39 (290)
                      .+++.+|+|.|. | +|..+|..|+..|.  +++++|.+
T Consensus       104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D  140 (722)
T PRK07877        104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFD  140 (722)
T ss_pred             HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCC
Confidence            467889999999 4 99999999999994  78888754

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.84  E-value=0.26  Score=45.70  Aligned_cols=74  Identities=18%  Similarity=0.078  Sum_probs=49.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-e----EEE----EecCcccHHHHHHHHHhcC-C--CcEEEEEeeCCCHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-I----TVL----TARDEKGGLEAVEKLKHSG-F--DNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~----Vi~----~~r~~~~~~~~~~~l~~~~-~--~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      ++.|+|++|.+|.++|-.|+..+. .    |.+    .+++.++++...-++.+.. .  ..+.+..   .+       .
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~-------y  115 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DP-------Y  115 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CC-------H
Confidence            689999999999999999998874 3    343    4888888777666665432 1  1111111   11       1


Q ss_pred             HHHHhhcCCccEEEEccccC
Q 039097           76 DFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~   95 (290)
                      +    .+...|++|..||.-
T Consensus       116 ~----~~kdaDIVVitAG~p  131 (387)
T TIGR01757       116 E----VFEDADWALLIGAKP  131 (387)
T ss_pred             H----HhCCCCEEEECCCCC
Confidence            1    124689999999963

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.83  E-value=0.15  Score=47.09  Aligned_cols=75  Identities=21%  Similarity=0.356  Sum_probs=48.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|.|+ |+||..+++.....|++|++++++.++..+..+++   +-+    ..+|..+.+.+.+       ..+.
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~l---Ga~----~~i~~~~~~~v~~-------~~~~  242 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRL---GAD----SFLVTTDSQKMKE-------AVGT  242 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhC---CCc----EEEcCcCHHHHHH-------hhCC
Confidence            4789999876 89999999999999999999888765433333332   211    1123333222221       1246


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.+.|.
T Consensus       243 ~D~vid~~G~  252 (375)
T PLN02178        243 MDFIIDTVSA  252 (375)
T ss_pred             CcEEEECCCc
Confidence            8999999883

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.83  E-value=0.15  Score=47.25  Aligned_cols=73  Identities=21%  Similarity=0.250  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.|+++|+|++ .+|+.+++.+.+.|++|++++.++........       +  ..+.+|..|.+.+.+++++     .+
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-------d--~~~~~~~~d~~~l~~~~~~-----~~   75 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------H--RSHVIDMLDGDALRAVIER-----EK   75 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-------h--heEECCCCCHHHHHHHHHH-----hC
Confidence            35689999875 68999999999999999999988754221110       1  2456788888887777764     26


Q ss_pred             ccEEEEcc
Q 039097           85 LDILVNNA   92 (290)
Q Consensus        85 id~li~~A   92 (290)
                      +|.++...
T Consensus        76 id~vi~~~   83 (395)
T PRK09288         76 PDYIVPEI   83 (395)
T ss_pred             CCEEEEee
Confidence            89888654

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.83  E-value=0.11  Score=47.41  Aligned_cols=78  Identities=17%  Similarity=0.285  Sum_probs=49.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||.|+ |++|..+++.+...|++ |+.+++++.+.+.+ +++   +.+    ...|..+.+..+++ .+.... .
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~---Ga~----~~i~~~~~~~~~~i-~~~~~~-~  244 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REF---GAT----HTVNSSGTDPVEAI-RALTGG-F  244 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc----eEEcCCCcCHHHHH-HHHhCC-C
Confidence            4789999975 99999999999889985 88888887654443 222   211    12244333322222 222111 2


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      .+|++|.+.|
T Consensus       245 g~d~vid~~g  254 (358)
T TIGR03451       245 GADVVIDAVG  254 (358)
T ss_pred             CCCEEEECCC
Confidence            5899999988

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.82  E-value=0.072  Score=38.75  Aligned_cols=37  Identities=16%  Similarity=0.294  Sum_probs=32.2

Q ss_pred             CCCchhHHHHHHHHHCC---CeEEEE-ecCcccHHHHHHHH
Q 039097           14 ANKGIGYEVVRQLALNG---IITVLT-ARDEKGGLEAVEKL   50 (290)
Q Consensus        14 gs~gIG~aia~~L~~~g---~~Vi~~-~r~~~~~~~~~~~l   50 (290)
                      |+|.+|.++++.|++.|   .+|.+. +|++++..+..++.
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            88999999999999999   899955 99998877766664

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=94.81  E-value=0.14  Score=47.59  Aligned_cols=75  Identities=17%  Similarity=0.271  Sum_probs=55.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+++++++||.|+ |-+|.-+|++|+++|. +|+++.|+.+++++..+++.           +++...+++...+.    
T Consensus       174 ~~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~-----------~~~~~l~el~~~l~----  237 (414)
T COG0373         174 GSLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG-----------AEAVALEELLEALA----  237 (414)
T ss_pred             cccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC-----------CeeecHHHHHHhhh----
Confidence            3578999999987 5799999999999995 78999999999888887763           23333344444444    


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                         ..|+||.+.|-.
T Consensus       238 ---~~DvVissTsa~  249 (414)
T COG0373         238 ---EADVVISSTSAP  249 (414)
T ss_pred             ---hCCEEEEecCCC
Confidence               568888876643

>cd05295 MDH_like Malate dehydrogenase-like

Probab=94.80  E-value=0.16  Score=47.91  Aligned_cols=74  Identities=16%  Similarity=0.173  Sum_probs=49.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---C----CeEEEEec--CcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALN---G----IITVLTAR--DEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~---g----~~Vi~~~r--~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      +|+||||+|-||+++.-++++-   |    ..+++++.  +.+.++...-++.+..   ...+.+. .|  +    .+. 
T Consensus       125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~----~ea-  196 (452)
T cd05295         125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--L----DVA-  196 (452)
T ss_pred             EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--C----HHH-
Confidence            6999999999999999999973   3    35777788  5666666665665432   1112222 11  1    112 


Q ss_pred             HHHHhhcCCccEEEEccccC
Q 039097           76 DFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~   95 (290)
                            +...|++|..||.-
T Consensus       197 ------~~daDvvIitag~p  210 (452)
T cd05295         197 ------FKDAHVIVLLDDFL  210 (452)
T ss_pred             ------hCCCCEEEECCCCC
Confidence                  24789999999963

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14852 hypothetical protein; Provisional

Probab=94.78  E-value=0.18  Score=51.76  Aligned_cols=81  Identities=20%  Similarity=0.146  Sum_probs=51.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~   61 (290)
                      .+++.+|+|.| .||+|..+++.|+..|. ++.++|.+.                   .|.+.+.+.+...++. ++..+
T Consensus       329 kL~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~  407 (989)
T PRK14852        329 RLLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF  407 (989)
T ss_pred             HHhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence            46678899998 67999999999999998 688876432                   2333344444443332 45555


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNA   92 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~A   92 (290)
                      ...++ .+.+.++++       .+|+||.+.
T Consensus       408 ~~~I~-~en~~~fl~-------~~DiVVDa~  430 (989)
T PRK14852        408 PEGVA-AETIDAFLK-------DVDLLVDGI  430 (989)
T ss_pred             ecCCC-HHHHHHHhh-------CCCEEEECC
Confidence            55553 344444444       467666544

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=94.78  E-value=0.2  Score=44.09  Aligned_cols=88  Identities=22%  Similarity=0.203  Sum_probs=57.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHH-CCCeEEEEe-------cCcccH----HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLAL-NGIITVLTA-------RDEKGG----LEAVEKLKHSGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~-------r~~~~~----~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      |+|||.|+|+|.|.+.-...+= -|++-+.+.       +++...    ....++.....+--..-+..|.-+.+--++.
T Consensus        42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~kv  121 (398)
T COG3007          42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQKV  121 (398)
T ss_pred             ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHHH
Confidence            6899999999998875443332 355544432       222111    1223333333333345678899998888999


Q ss_pred             HHHHHhhcCCccEEEEcccc
Q 039097           75 ADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~   94 (290)
                      ++-+++.+|++|.+|+.-+-
T Consensus       122 Ie~Ik~~~g~vDlvvYSlAs  141 (398)
T COG3007         122 IEAIKQDFGKVDLVVYSLAS  141 (398)
T ss_pred             HHHHHHhhccccEEEEeccC
Confidence            99999999999999987653

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.77  E-value=0.23  Score=41.94  Aligned_cols=60  Identities=17%  Similarity=0.211  Sum_probs=42.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA   66 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~   66 (290)
                      |-+++||++||.|| |.+|..-++.|++.|++|++++.+..+   ...++...+  ++.++.-+..
T Consensus         4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~---~l~~l~~~~--~i~~~~~~~~   63 (205)
T TIGR01470         4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELES---ELTLLAEQG--GITWLARCFD   63 (205)
T ss_pred             EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHcC--CEEEEeCCCC
Confidence            34789999999986 578999999999999999999876542   222332222  4666665554

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.77  E-value=0.15  Score=47.43  Aligned_cols=39  Identities=15%  Similarity=0.152  Sum_probs=33.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG   43 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~   43 (290)
                      .+.+++|+|+++++|.++++.+...|+++++++++..+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~  227 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKA  227 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            468999999999999999999999999988888776543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.77  E-value=0.12  Score=46.86  Aligned_cols=78  Identities=26%  Similarity=0.306  Sum_probs=50.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .+++++|+|+ +++|..+++.+...|+ +|+++++++++.+.+ .++   +.+    ..+|..+.+..+++ .+.... +
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~----~~i~~~~~~~~~~l-~~~~~~-~  240 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GAT----IVLDPTEVDVVAEV-RKLTGG-G  240 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCC----EEECCCccCHHHHH-HHHhCC-C
Confidence            4789999985 8999999999999999 788888877664433 222   211    12344443322222 222111 2


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      .+|++|.+.|
T Consensus       241 ~~d~vid~~g  250 (351)
T cd08233         241 GVDVSFDCAG  250 (351)
T ss_pred             CCCEEEECCC
Confidence            4999999998

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.73  E-value=0.11  Score=46.59  Aligned_cols=42  Identities=19%  Similarity=0.251  Sum_probs=36.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      .+.+++|.|+++.+|.++++.+...|++|+.+++++++.+..
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467999999999999999999999999999998887665443

>PRK07411 hypothetical protein; Validated

Probab=94.73  E-value=0.17  Score=47.17  Aligned_cols=36  Identities=22%  Similarity=0.277  Sum_probs=29.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .++..+|+|.|+ ||+|..+++.|+..|. +++++|.+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            356678888865 6999999999999998 68888754

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.71  E-value=0.14  Score=47.09  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=50.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .+.+++|.|+ |+||..+++.+...|+ +|+++++++.+.+-+ +++   +.+    ...|..+.+..++ +.++..  +
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~---Ga~----~~i~~~~~~~~~~-i~~~~~--~  258 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL---GAT----ATVNAGDPNAVEQ-VRELTG--G  258 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc---CCc----eEeCCCchhHHHH-HHHHhC--C
Confidence            4789999985 8999999998888999 688888887765433 232   211    1233333322222 222222  2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.+.|.
T Consensus       259 g~d~vid~~G~  269 (371)
T cd08281         259 GVDYAFEMAGS  269 (371)
T ss_pred             CCCEEEECCCC
Confidence            69999999883

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.69  E-value=0.14  Score=47.50  Aligned_cols=41  Identities=17%  Similarity=0.198  Sum_probs=35.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      .+.+++|+|++|+||.++++.+...|++++++++++++.+.
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~  233 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEY  233 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHH
Confidence            47799999999999999999999999998888887665443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.64  E-value=0.18  Score=47.05  Aligned_cols=36  Identities=25%  Similarity=0.325  Sum_probs=29.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++.+|+|.|+ ||+|..+|+.|+..|. ++.++|.+
T Consensus        39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            356778888865 6999999999999998 68888754

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.63  E-value=0.36  Score=40.97  Aligned_cols=79  Identities=16%  Similarity=0.035  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHh------------cCCCcEEEEEeeCCCHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH------------SGFDNVIFHQLDVADPAAIH   72 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~------------~~~~~~~~~~~Dl~~~~~v~   72 (290)
                      .+.+||+-|.+.|   .=|..|+++|++|+.++.++..++.+.++-..            ....++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999998877   45677788999999999999887765432210            012368889999987542  


Q ss_pred             HHHHHHHhhcCCccEEEEccccC
Q 039097           73 SVADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        73 ~~~~~~~~~~~~id~li~~Ag~~   95 (290)
                             ...+..|.++-.+...
T Consensus       109 -------~~~~~fD~i~D~~~~~  124 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALI  124 (213)
T ss_pred             -------ccCCCcCEEEechhhc
Confidence                   0124578888776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=94.60  E-value=0.24  Score=44.18  Aligned_cols=75  Identities=21%  Similarity=0.279  Sum_probs=45.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEEEeeCCC
Q 039097            9 AVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFHQLDVAD   67 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~~Dl~~   67 (290)
                      |+|.| .||+|.++++.|+..|. ++.++|.+.                   .+++.+.+.++...+. ++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            56666 67999999999999998 688876432                   2233334444443332 45666666654


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      .+  .+++       ...|++|.+.-
T Consensus        81 ~~--~~f~-------~~fdvVi~alD   97 (291)
T cd01488          81 KD--EEFY-------RQFNIIICGLD   97 (291)
T ss_pred             hh--HHHh-------cCCCEEEECCC
Confidence            32  2232       35787777543

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.60  E-value=0.19  Score=45.53  Aligned_cols=38  Identities=21%  Similarity=0.237  Sum_probs=34.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ++.||++-|.| .|.||+++|+++..-|++|+..+|++.
T Consensus       143 ~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         143 DLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            67899999997 578999999999988999999999875

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=94.58  E-value=0.37  Score=42.45  Aligned_cols=83  Identities=18%  Similarity=0.259  Sum_probs=58.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEE--ecCcc--cH----------------HHHHHHHHhcCCCcEEEEEeeCCC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLT--ARDEK--GG----------------LEAVEKLKHSGFDNVIFHQLDVAD   67 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~--~r~~~--~~----------------~~~~~~l~~~~~~~~~~~~~Dl~~   67 (290)
                      +|+|.|++|-+|+++++...+.++.++..  ++...  +.                ...++++...   ....+.+|+|.
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~v~~~~~~~~~l~~~~~~---~~d~VvIDFT~   78 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAGLEIVPTSFGGEEEAENEAEVAGKEILLHGPSEREARIGEVFAK---YPELICIDYTH   78 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCCCEEEeeEccccccccchhhhcccceeeeccccccccHHHHHhh---cCCEEEEECCC
Confidence            58999999999999999999988888864  22211  11                1111111111   12337799999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccC
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag~~   95 (290)
                      ++.+.+.++.+.+.  ++.+||-..|+.
T Consensus        79 P~~~~~n~~~~~~~--gv~~ViGTTG~~  104 (275)
T TIGR02130        79 PSAVNDNAAFYGKH--GIPFVMGTTGGD  104 (275)
T ss_pred             hHHHHHHHHHHHHC--CCCEEEcCCCCC
Confidence            99999998888776  789999888863

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>PLN02827 Alcohol dehydrogenase-like

Probab=94.56  E-value=0.18  Score=46.59  Aligned_cols=79  Identities=18%  Similarity=0.225  Sum_probs=50.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .|.++||.|+ |+||..+++.+...|++ |+++++++++.+.+ +++   +.+    ...|..+. +++.+.+.++..  
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l---Ga~----~~i~~~~~~~~~~~~v~~~~~--  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF---GVT----DFINPNDLSEPIQQVIKRMTG--  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCc----EEEcccccchHHHHHHHHHhC--
Confidence            4789999985 99999999999889985 77777776654432 222   211    11333332 344444444332  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.+.|.
T Consensus       262 ~g~d~vid~~G~  273 (378)
T PLN02827        262 GGADYSFECVGD  273 (378)
T ss_pred             CCCCEEEECCCC
Confidence            269999999983

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.55  E-value=0.17  Score=45.42  Aligned_cols=76  Identities=25%  Similarity=0.236  Sum_probs=50.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCC--cEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++|.|+|+ |+||.++|..|+.++.  .+++.+++++..+-...++......  .-..+..| .+.+    .+       
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~----~~-------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYE----DL-------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChh----hh-------
Confidence            46889999 9999999999988874  7999999977666555555433210  01112222 1111    12       


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||.-
T Consensus        68 ~~aDiVvitAG~p   80 (313)
T COG0039          68 KGADIVVITAGVP   80 (313)
T ss_pred             cCCCEEEEeCCCC
Confidence            3689999999964

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=94.50  E-value=0.24  Score=45.16  Aligned_cols=39  Identities=21%  Similarity=0.177  Sum_probs=33.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGL   44 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~   44 (290)
                      .++++||+| +|++|.++++.+...|+ +|+++++++++.+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~  216 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLE  216 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            578999997 59999999999999999 8999888766543

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.49  E-value=0.52  Score=45.28  Aligned_cols=129  Identities=13%  Similarity=0.170  Sum_probs=72.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++|.|. |+.|.++|+.|.++|+.|.+.|.+...  +..+.+...+. .+.+...+.. +    ..+      
T Consensus         3 ~~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~~~--~~~~~L~~~~~-~~~~~~g~~~-~----~~~------   67 (498)
T PRK02006          3 GDLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTREAP--PNLAALRAELP-DAEFVGGPFD-P----ALL------   67 (498)
T ss_pred             cccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCCCc--hhHHHHHhhcC-CcEEEeCCCc-h----hHh------
Confidence            3577889999995 578999999999999999999976532  11223332221 1222221111 1    112      


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHH--HhhhcccchHHHHHHHhchhhccCC-CCeEEEEc
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE--KCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVS  158 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~is  158 (290)
                       ...|.||...|+...+..                   ....+.  +-..+.+.+-.-++..+++.+.... ...+|.|+
T Consensus        68 -~~~d~vv~sp~I~~~~~~-------------------~~~~~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VT  127 (498)
T PRK02006         68 -DGVDLVALSPGLSPLEAA-------------------LAPLVAAARERGIPVWGEIELFAQALAALGASGYAPKVLAIT  127 (498)
T ss_pred             -cCCCEEEECCCCCCcccc-------------------cCHHHHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEE
Confidence             247999999996432100                   001122  2235666766666555544332111 13577777


Q ss_pred             CCCCccc
Q 039097          159 SSLGKLM  165 (290)
Q Consensus       159 S~~g~~~  165 (290)
                      ...|+..
T Consensus       128 GTnGKTT  134 (498)
T PRK02006        128 GTNGKTT  134 (498)
T ss_pred             CCCcHHH
Confidence            7777643

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=94.48  E-value=0.22  Score=48.87  Aligned_cols=35  Identities=20%  Similarity=0.244  Sum_probs=28.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      +++.+|||.|+ ||+|..+|+.|+..|. +++++|.+
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D  371 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG  371 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence            45678888875 7899999999999998 68888743

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.41  E-value=0.37  Score=43.14  Aligned_cols=72  Identities=24%  Similarity=0.193  Sum_probs=48.9

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCC--cEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097           10 VVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus        10 lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .|.|+ |++|.++|..|+.+|  .++++.|+++++++....++.+....  ...+..+  .+       .+.    +..-
T Consensus         2 ~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~-------~~~----l~~a   67 (300)
T cd00300           2 TIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD-------YAD----AADA   67 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC-------HHH----hCCC
Confidence            56776 679999999999998  57999999988877766666543321  1111111  11       111    2368


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |++|.+||..
T Consensus        68 DiVIitag~p   77 (300)
T cd00300          68 DIVVITAGAP   77 (300)
T ss_pred             CEEEEcCCCC
Confidence            9999999963

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.38  E-value=0.25  Score=45.51  Aligned_cols=78  Identities=18%  Similarity=0.225  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .+.+++|.| .+++|.++++.+...|+ +|++++++..+.+.+ +++   +-+    ...+..+. +...+.+.++..  
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~l---Ga~----~~i~~~~~~~~~~~~v~~~~~--  258 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KEL---GAT----ECINPQDYKKPIQEVLTEMTD--  258 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCc----eEecccccchhHHHHHHHHhC--
Confidence            477999995 68999999999999999 799999887665544 332   211    12222221 123333333333  


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      +.+|.+|.+.|
T Consensus       259 ~~~d~vld~~g  269 (373)
T cd08299         259 GGVDFSFEVIG  269 (373)
T ss_pred             CCCeEEEECCC
Confidence            36999999987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.38  E-value=0.11  Score=45.92  Aligned_cols=37  Identities=16%  Similarity=0.135  Sum_probs=33.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~   39 (290)
                      ++.||+++|.|.|.-+|+-+|..|.++|+.|.++...
T Consensus       154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999999999999999999999999987443

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.35  E-value=0.085  Score=46.60  Aligned_cols=44  Identities=25%  Similarity=0.307  Sum_probs=36.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l   50 (290)
                      +|+++|.|+ ||-+++++..|++.|+ +|.++.|+.++.++..+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468888885 9999999999999998 5999999988776655543

>PLN02306 hydroxypyruvate reductase

Probab=94.29  E-value=0.23  Score=46.19  Aligned_cols=38  Identities=13%  Similarity=-0.001  Sum_probs=32.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~-~~g~~Vi~~~r~~~   41 (290)
                      ++.||++.|.| .|.||+++|++|. .-|++|+..++...
T Consensus       162 ~L~gktvGIiG-~G~IG~~vA~~l~~~fGm~V~~~d~~~~  200 (386)
T PLN02306        162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQS  200 (386)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCEEEEECCCCc
Confidence            47899999997 5789999999986 77999999998754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	290
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		4e-90
1wma_A	276	Crystal Structure Of Human Cbr1 In Complex With Hyd		1e-39
2pfg_A	276	Crystal Structure Of Human Cbr1 In Complex With Big		3e-38
1n5d_A	288	Crystal Structure Of Porcine Testicular Carbonyl Re		3e-36
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		2e-35
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-14
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		4e-14
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-13
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		6e-12
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-11
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-11
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-11
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-11
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		4e-11
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-11
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		9e-11
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-10
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		1e-10
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-10
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-10
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-10
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-10
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-10
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		4e-10
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-10
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		4e-10
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		4e-10
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		5e-10
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		5e-10
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		5e-10
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		5e-10
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		7e-10
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-09
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-09
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-09
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-09
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-09
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		3e-09
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		3e-09
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		3e-09
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		3e-09
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		4e-09
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-09
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		4e-09
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		6e-09
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		6e-09
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-09
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-08
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-08
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		3e-08
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		3e-08
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		6e-08
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		9e-08
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-07
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-07
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-07
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-07
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-07
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-07
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-07
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		3e-07
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		3e-07
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		3e-07
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		3e-07
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-07
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		4e-07
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		4e-07
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		4e-07
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		5e-07
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		5e-07
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		6e-07
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		9e-07
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		9e-07
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		9e-07
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-06
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		2e-06
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		2e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		3e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		3e-06
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-06
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		3e-06
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-06
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		7e-06
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		8e-06
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		8e-06
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-05
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		1e-05
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		2e-05
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		2e-05
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-05
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-05
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		3e-05
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-05
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		4e-05
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		4e-05
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-05
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-05
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		5e-05
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		5e-05
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		5e-05
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		5e-05
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		6e-05
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		8e-05
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		9e-05
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-05
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		9e-05
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		1e-04
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		1e-04
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		2e-04
1yo6_A	250	Crystal Structure Of The Putative Carbonyl Reductas		2e-04
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		2e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-04
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-04
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-04
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		2e-04
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		2e-04
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		3e-04
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		3e-04
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		3e-04
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		4e-04
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-04
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-04
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		5e-04
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		5e-04
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-04
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		6e-04
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		6e-04
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		6e-04
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		7e-04
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		7e-04
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-04
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		7e-04
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		7e-04
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		7e-04
1iol_A	327	Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com		8e-04
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		8e-04
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		8e-04
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		8e-04

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score =  327 bits (838), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 168/302 (55%), Positives = 204/302 (67%), Gaps = 15/302 (4%)
Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           T +R AVVTG NKGIG+E+ +QL+ NGI+ VLT RD   G EAVEKLK+S  +NV+FHQL
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQL 69
Query: 64  DVADP-AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFI-------------- 108
           DV DP A + S+ADFI++HFGKLDILVNNAG+ G S DAD     I              
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129
Query: 109 EEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT 168
           E+  A+  M++TYE AE+CL+ NY G K + E LIPLLQLSDS RIVNVSSS G L YV+
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS 189
Query: 169 HEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI 228
           +E A  +  D + LTEER+D V++  L D+KE   ET GWP+  AAY  SKA +NAYTR+
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249
Query: 229 LAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET 288
           LA K P F +NCVCPG VKTEM Y  G  T EEGAE  V +AL    GPSG F+   E +
Sbjct: 250 LANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSELS 309
Query: 289 LF 290
            F
Sbjct: 310 AF 311

>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276

Iteration: 1
 Score =  159 bits (403), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/289 (36%), Positives = 160/289 (55%), Gaps = 36/289 (12%)
Query: 9   AVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           A+VTG NKGIG  +VR L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDV-VLTARDVTRGQAAVQQLQAEGL-SPRFHQLDID 64
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  +  AE 
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEV 108
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTE 184
            ++TN+ G + +C  L+PL++     R+VNVSS  S+  L   + E  +   S  E +TE
Sbjct: 109 TMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRS--ETITE 164
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP------NFCI 238
           E +  ++++++ D K+G  + +GWP  ++AY ++K  +   +RI A+K           +
Sbjct: 165 EELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL 222
Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRK 285
           N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct: 223 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276

Iteration: 1
 Score =  155 bits (391), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 36/289 (12%)
Query: 9   AVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           A+VTG NKGIG  +VR L    +G + VLTARD   G  AV++L+  G  +  FHQLD+ 
Sbjct: 7   ALVTGGNKGIGLAIVRDLCRLFSGDV-VLTARDVTRGQAAVQQLQAEGL-SPRFHQLDID 64
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  +  AE 
Sbjct: 65  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHIQAEV 108
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENLTE 184
            ++TN+ G + +   L+PL++     R+VNVSS  S+  L   + E  +   S  E +TE
Sbjct: 109 TMKTNFFGTRDVXTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRS--ETITE 164
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP------NFCI 238
           E +  ++++++ D K+G  + +GWP  ++AY ++K  +   +RI A+K           +
Sbjct: 165 EELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL 222
Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRK 285
           N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K
Sbjct: 223 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEK 271

>pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288

Iteration: 1
 Score =  148 bits (374), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/292 (35%), Positives = 160/292 (54%), Gaps = 36/292 (12%)
Query: 7   RYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           R A+VTGANKGIG+ +VR L     G + VLTARD   G  AV++L+  G  +  FHQLD
Sbjct: 5   RVALVTGANKGIGFAIVRDLCRQFAGDV-VLTARDVARGQAAVKQLQAEGL-SPRFHQLD 62
Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           + D  +I ++ DF+R  +G LD+LVNNA    I+   D  + F             +  A
Sbjct: 63  IIDLQSIRALCDFLRKEYGGLDVLVNNA---AIAFQLDNPTPF-------------HIQA 106
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG--KLMYVTHEWAKGVFSDAENL 182
           E  ++TN++G + +C  L+PL++     R+VNVSS+ G   L   + E  +   S  E +
Sbjct: 107 ELTMKTNFMGTRNVCTELLPLIK--PQGRVVNVSSTEGVRALNECSPELQQKFKS--ETI 162
Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY------PNF 236
           TEE +  ++++++ D K G    +GW  + + Y ++K  ++  +RI A+K          
Sbjct: 163 TEEELVGLMNKFVEDTKNGVHRKEGW--SDSTYGVTKIGVSVLSRIYARKLREQRAGDKI 220
Query: 237 CINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRKE 286
            +N  CPG+V+T+M       + E GAE+PV+LALL     GP G F + K+
Sbjct: 221 LLNACCPGWVRTDMGGPKAPKSPEVGAETPVYLALLPSDAEGPHGQFVTDKK 272

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 146/276 (52%), Gaps = 34/276 (12%)
Query: 7   RYAVVTGANKGIGYEVVRQLA--LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           R A+VTGAN+GIG  + R+L    +G + VLTARD   G  AV++L+  G  +  FHQLD
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDV-VLTARDVARGQAAVQQLQAEGL-SPRFHQLD 60
Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           + D  +I ++ DF+R  +G L++LVNNA +   S D                       A
Sbjct: 61  IDDLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMPFDI----------------KA 104
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS--SLGKLMYVTHEWAKGVFSDAENL 182
           E  L+TN+   + MC  L+P+++     R+VN+SS   L      + +  +   S  E L
Sbjct: 105 EMTLKTNFFATRNMCNELLPIMK--PHGRVVNISSLQCLRAFENCSEDLQERFHS--ETL 160
Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK------KYPNF 236
           TE  + +++ +++ D K    E +GWP   + Y +SK  +   +RILA+      K    
Sbjct: 161 TEGDLVDLMKKFVEDTKNEVHEREGWPN--SPYGVSKLGVTVLSRILARRLDEKRKADRI 218
Query: 237 CINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL 272
            +N  CPG VKT+M       TVEEGAE+PV+LALL
Sbjct: 219 LVNACCPGPVKTDMDGKDSIRTVEEGAETPVYLALL 254

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 105/247 (42%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G        L+V 
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG----LMLNVT 61
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E    
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWND 105
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+ + S +G +                      
Sbjct: 106 IIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM---------------------- 143
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                               G  AN AA   +KA +  +++ LA++  +    +N V PG
Sbjct: 144 ------------------GNGGQANFAA---AKAGLIGFSKSLAREVASRGITVNVVAPG 182
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 183 FIETDMT 189

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G        L+V 
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG----LMLNVT 61
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E    
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWND 105
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+ + S +G +                      
Sbjct: 106 IIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM---------------------- 143
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                               G  AN   Y  +KA +  +++ LA++  +    +N V PG
Sbjct: 144 ------------------GNGGQAN---YAAAKAGLIGFSKSLAREVASRGITVNVVAPG 182
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 183 FIETDMT 189

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 102/248 (41%), Gaps = 62/248 (25%)
Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           K+ A+VTGA++GIG  +  +LA  G + + TA  E G        K +G +      L+V
Sbjct: 28  KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGR-GAVLNV 86
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D  A+ ++ +     FG L++LVNNAGIT      D L+           M    +  +
Sbjct: 87  NDATAVDALVESTLKEFGALNVLVNNAGIT-----QDQLA-----------MRMKDDEWD 130
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN     R+  A++  +  +   RIVN++S +G                       
Sbjct: 131 AVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG----------------------- 167
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCP 243
                          G+P           Y  +KA +   TR LA++  +    +NCV P
Sbjct: 168 -------------SAGNP-------GQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAP 207
Query: 244 GYVKTEMT 251
           G++ T+MT
Sbjct: 208 GFIDTDMT 215

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 99/247 (40%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN     L+V 
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVT 68
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P +I +V   I   FG +DILVNNAGIT      D L            M    E    
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAGIT-----RDNL-----------LMRMKEEEWSD 112
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+NV S +G +                      
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---------------------- 150
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                                  A  A Y  +KA +  +T+ +A++  +    +N V PG
Sbjct: 151 ---------------------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPG 189
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 190 FIETDMT 196

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 66/250 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDV 65
           R A+VTG ++G+G+ + + LA  G   V+ +R+ +   EA +KL    G + + F + DV
Sbjct: 22  RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF-RCDV 80
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           ++   +  + + ++  FGKLD +VN AGI                   R    + +   E
Sbjct: 81  SNYEEVKKLLEAVKEKFGKLDTVVNAAGIN------------------RRHPAEEFPLDE 122
Query: 126 --KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
             + ++ N  G   +C     LL+ SD+  I+N+ S                      LT
Sbjct: 123 FRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS----------------------LT 160
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
            E V                       N +AY  SK  + + T+ LAK++  + I  N +
Sbjct: 161 VEEVT--------------------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVI 200
Query: 242 CPGYVKTEMT 251
            PG+ +T+MT
Sbjct: 201 APGWYRTKMT 210

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 99/247 (40%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN     L+V 
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVT 68
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P +I +V   I   FG +DILVNNAGIT      D L            M    E    
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAGIT-----RDNL-----------LMRMKEEEWSD 112
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+NV S +G +                      
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---------------------- 150
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                                  A  A +  +KA +  +T+ +A++  +    +N V PG
Sbjct: 151 ---------------------GNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPG 189
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 190 FIETDMT 196

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 98/247 (39%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN     L+V 
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVT 68
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P +I +V   I   FG +DILVNNAGIT      D L            M    E    
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAGIT-----RDNL-----------LMRMKEEEWSD 112
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+NV S +G +                      
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---------------------- 150
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                                  A  A Y  +KA +  +T+ +A++  +    +N V PG
Sbjct: 151 ---------------------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPG 189
Query: 245 YVKTEMT 251
            ++T+MT
Sbjct: 190 AIETDMT 196

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN     L+V 
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVT 68
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P +I +V   I   FG +DILVNNA IT      D L            M    E    
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNAAIT-----RDNL-----------LMRMKEEEWSD 112
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+NV S +G +                      
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---------------------- 150
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                                  A  A Y  +KA +  +T+ +A++  +    +N V PG
Sbjct: 151 ---------------------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPG 189
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 190 FIETDMT 196

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 100/253 (39%), Gaps = 74/253 (29%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L  +G        L+V 
Sbjct: 6   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKG----LMLNVT 61
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DPA+I SV + IR+ FG++DILVNNAGIT      D L            M    E    
Sbjct: 62  DPASIESVLEKIRAEFGEVDILVNNAGIT-----RDNL-----------LMRMKDEEWND 105
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+ +                             
Sbjct: 106 IIETNLSSVFRLSKAVMRAMMKKRHGRIITI----------------------------- 136
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                               G  AN   Y  +KA +  +++ LA++  +    +N V PG
Sbjct: 137 --------------------GGQAN---YAAAKAGLIGFSKSLAREVASRGITVNVVAPG 173
Query: 245 YVKTEMTYNAGRL 257
           +++T     AG L
Sbjct: 174 FIETSDDQRAGIL 186

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 98/247 (39%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN     L+V 
Sbjct: 13  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGMALNVT 68
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P +I +V   I   FG +DILVNNA IT      D L            M    E    
Sbjct: 69  NPESIEAVLKAITDEFGGVDILVNNADIT-----RDNL-----------LMRMKEEEWSD 112
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+NV S +G +                      
Sbjct: 113 IMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTM---------------------- 150
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                                  A  A Y  +KA +  +T+ +A++  +    +N V PG
Sbjct: 151 ---------------------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPG 189
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 190 FIETDMT 196

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 98/250 (39%), Gaps = 62/250 (24%)
Query: 6   KRYAVVTGANKGIGYEV-VRQLALNGIITVLTARDEKGGLEAVEKLK-HSGFDNVIFHQL 63
            R A+VTGA+ G G  +  R LA    +  L    E   LE   +   H+  D V+  + 
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAET--LEETARTHWHAYADKVLRVRA 59
Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DVAD   +++        FG +D+LVNNAGITG S          E GV     T   E 
Sbjct: 60  DVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNS----------EAGVLH---TTPVEQ 106
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +K +  N  G    C A++P + L  +  IVN++S    + +                 
Sbjct: 107 FDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF----------------- 149
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC--V 241
                                    P   +AY  SK A+   T+ +A  Y    I C  V
Sbjct: 150 -------------------------PGR-SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAV 183
Query: 242 CPGYVKTEMT 251
           CPG ++T MT
Sbjct: 184 CPGMIETPMT 193

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 65/249 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDV 65
           + A+VTG+++G+G  +  +L   G   VL        L+A  E+ K +G  NV+  + DV
Sbjct: 6   KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGI-NVVVAKGDV 64
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            +P  + ++       FG++DILVNNAGIT      DTL            +  + +  +
Sbjct: 65  KNPEDVENMVKTAMDAFGRIDILVNNAGIT-----RDTL-----------MLKMSEKDWD 108
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             L TN   A    +A+  ++    S +I+N++S  G +                     
Sbjct: 109 DVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII--------------------- 147
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN---FCINCVC 242
                                   A  A Y  SKA +  +T+ +AK++     +C N V 
Sbjct: 148 ----------------------GNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC-NAVA 184
Query: 243 PGYVKTEMT 251
           PG +KT+MT
Sbjct: 185 PGIIKTDMT 193

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 62/247 (25%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +  +L   G + + TA    G  +  E LK +G +      LDV+
Sbjct: 28  KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGL-VLDVS 86
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
              ++ +  + I+ H G+  I+VNNAGIT      D L       + R K  + ++    
Sbjct: 87  SDESVAATLEHIQQHLGQPLIVVNNAGIT-----RDNL-------LVRMKDDEWFDVVNT 134
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L + Y    R+ +A++  +  +   RI+N+ S +G +                      
Sbjct: 135 NLNSLY----RLSKAVLRGMTKARWGRIINIGSVVGAM---------------------- 168
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                                  A    Y  +KA +  +TR LA++  +    +N V PG
Sbjct: 169 ---------------------GNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPG 207
Query: 245 YVKTEMT 251
           ++ T+MT
Sbjct: 208 FIDTDMT 214

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 61/247 (24%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  +  QLA  G    +     K   EAV E++K  G D+    Q +V
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANV 69
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           AD   + ++   + S FG LD+LVNNAGIT      D L   ++E           +  +
Sbjct: 70  ADADEVKAMIKEVVSQFGSLDVLVNNAGIT-----RDNLLMRMKE-----------QEWD 113
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN  G     +   P +    S  I+N+SS +G +                     
Sbjct: 114 DVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAV--------------------- 152
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYI-LSKAAMNAYTRILAKKYPNFCINCVCPG 244
                          G+P    + A  A  I L+K+A     R LA +     +N V PG
Sbjct: 153 ---------------GNPGQANYVATKAGVIGLTKSA----ARELASR--GITVNAVAPG 191
Query: 245 YVKTEMT 251
           ++ ++MT
Sbjct: 192 FIVSDMT 198

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 97/262 (37%), Gaps = 71/262 (27%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M E   + A+VTG + GIG  VV  L   G   V  + DEK  +   +  K         
Sbjct: 9   MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK--------- 59
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             +DV +   +    +     +G++DILVNNAGI               E  +   +T T
Sbjct: 60  --IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGI---------------EQYSPLHLTPT 102
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E   + +  N  G+  M +  IP++       I+N++S                     
Sbjct: 103 -EIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASV-------------------- 141
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN 239
                                  ++     NAAAY+ SK A+   TR +A  Y P    N
Sbjct: 142 -----------------------QSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178
Query: 240 CVCPGYVKTEMTYNAGRLTVEE 261
            VCPG + T M   A ++ V E
Sbjct: 179 AVCPGTIMTPMVIKAAKMEVGE 200

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 93/250 (37%), Gaps = 72/250 (28%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A VTG + GIG  V R LA  GI     ARD K    AV+ L+ +G D V     DV   
Sbjct: 27  AFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVTST 85
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +H+        FG + ILVN+AG  G    AD       +                 L
Sbjct: 86  DEVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWAD----------------VL 129
Query: 129 QTNYLGAKRMCEALIPLLQLSDS--ARIVNVSSSLGK--LMYVTHEWAKGVFSDAENLTE 184
            TN  G  R+   ++    + ++   RIVN++S+ GK  +MY                  
Sbjct: 130 DTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMY------------------ 171
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI----LAKKYPNFCINC 240
                                      AA Y  SK  +  +T+     LAK      +N 
Sbjct: 172 ---------------------------AAPYTASKHGVVGFTKSVGFELAKT--GITVNA 202
Query: 241 VCPGYVKTEM 250
           VCPGYV+T M
Sbjct: 203 VCPGYVETPM 212

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 79
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 80  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGV 138
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 139 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 172
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 173 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 203 NAVCPGWVETPM 214

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 63/248 (25%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  +   LA  G   V+  A +E+   E V+++K  G D  I  + DV
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSD-AIAVRADV 63
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           A+   + ++       FG++DILVNNAG+T      D L   ++E           E  +
Sbjct: 64  ANAEDVTNMVKQTVDVFGQVDILVNNAGVT-----KDNLLMRMKE-----------EEWD 107
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN  G     +A+   +      RIVN++S +G    VT                 
Sbjct: 108 TVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVG----VT----------------- 146
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                          G+P         A Y+ +KA +   T+  AK+    N  +N + P
Sbjct: 147 ---------------GNP-------GQANYVAAKAGVIGLTKTSAKELASRNITVNAIAP 184
Query: 244 GYVKTEMT 251
           G++ T+MT
Sbjct: 185 GFIATDMT 192

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 79
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 80  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGV 138
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 139 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 172
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 173 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 203 NAVCPGFVETPM 214

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 75
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 76  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGV 134
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 135 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 168
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 169 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 198
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 199 NAVCPGFVETPM 210

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 79
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 80  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGV 138
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 139 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 172
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 173 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 203 NAVCPGFVETPM 214

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 1   MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 59
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 60  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGV 118
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 119 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 152
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 153 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 182
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 183 NAVCPGFVETPM 194

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 102/252 (40%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 79
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 80  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAE-LADELWLDVVETNLTGV 138
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK   V             
Sbjct: 139 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGKQGLV------------- 172
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 173 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 203 NAVCPGFVETPM 214

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 69/258 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA+ GIG  + R+L + G   +L AR  +  +EA+           +   LDV 
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGAR-RQARIEAIATEIRDAGGTALAQVLDVT 63
Query: 67  DPAAIHSVADFIRSH---FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D    HSVA F ++    +G++D+LVNNAG+  +S  A                    + 
Sbjct: 64  DR---HSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAV----------------KVDE 104
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            E+ +  N  G      A++P+++   S +I+N+  S+G L  V                
Sbjct: 105 WERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINI-GSIGALSVVP--------------- 148
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP 243
                                       AA Y  +K A+ A +  L ++  N  + CV P
Sbjct: 149 ---------------------------TAAVYCATKFAVRAISDGLRQESTNIRVTCVNP 181
Query: 244 GYVKTEMTYNAGRLTVEE 261
           G V++E+   AG +T EE
Sbjct: 182 GVVESEL---AGTITHEE 196

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 21  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 79
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 80  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAE-LADELWLDVVETNLTGV 138
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 139 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 172
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 173 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 202
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 203 NAVCPGFVETPM 214

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 60/252 (23%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 75
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G  + A+ L+  +   V    +T  
Sbjct: 76  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAE-LADELWLDVVETNLTGV 134
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           +   ++ L+     A  M E          + RIVN++S+ GK         +GV     
Sbjct: 135 FRVTKQVLK-----AGGMLE--------RGTGRIVNIASTGGK---------QGVV---- 168
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         +AA Y  SK  +  +T+ L  +       +
Sbjct: 169 ------------------------------HAAPYSASKHGVVGFTKALGLELARTGITV 198
Query: 239 NCVCPGYVKTEM 250
           N VCPG+V+T M
Sbjct: 199 NAVCPGFVETPM 210

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 30/155 (19%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A+R  V+TGAN G+G    R+LA  G   ++  RD + G  A   +       V   +LD
Sbjct: 15  AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA----GQVEVRELD 70
Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           + D +++   AD +       D+L+NNAGI  +   A T+ GF                 
Sbjct: 71  LQDLSSVRRFADGVSGA----DVLINNAGIMAVPY-ALTVDGF----------------- 108
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           E  + TN+LG   +   L+P  +L+D  R+V VSS
Sbjct: 109 ESQIGTNHLGHFALTNLLLP--RLTD--RVVTVSS 139

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 98/248 (39%), Gaps = 75/248 (30%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH-QLDV 65
           R  +VTG N+GIG  + ++LA +G    +T R              SG    +F  ++DV
Sbjct: 36  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGVEVDV 82
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D  A+      +  H G +++LV+NA   G+S+DA     F+        M  T E  E
Sbjct: 83  TDSDAVDRAFTAVEEHQGPVEVLVSNA---GLSADA-----FL--------MRMTEEKFE 126
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K +  N  GA R+ +     +Q +   R++ ++S       V+  W  G           
Sbjct: 127 KVINANLTGAFRVAQRASRSMQRNKFGRMIFIAS-------VSGLWGIG----------- 168
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                                    N A Y  SKA +    R +A++    N   N V P
Sbjct: 169 -------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAP 203
Query: 244 GYVKTEMT 251
           GY+ T+MT
Sbjct: 204 GYIDTDMT 211

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 75/248 (30%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH-QLDV 65
           R  +VTG N+GIG  + ++LA +G    +T R              SG    +F  ++DV
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGVEVDV 62
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D  A+      +  H G +++LV+NA   G+S+DA     F+        M  T E  E
Sbjct: 63  TDSDAVDRAFTAVEEHQGPVEVLVSNA---GLSADA-----FL--------MRMTEEKFE 106
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K +  N  GA R+ +     +Q +   R++ + S       V+  W  G           
Sbjct: 107 KVINANLTGAFRVAQRASRSMQRNKFGRMIFIGS-------VSGLWGIG----------- 148
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                                    N A Y  SKA +    R +A++    N   N V P
Sbjct: 149 -------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAP 183
Query: 244 GYVKTEMT 251
           GY+ T+MT
Sbjct: 184 GYIDTDMT 191

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 83/189 (43%), Gaps = 21/189 (11%)
Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
           +E+AK + +VTGA+ G G  +       G   + TAR      EA++ L  +  D     
Sbjct: 2   SESAKVW-LVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPDRAEAI 56
Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
            LDV D   I  VA  + + +G++D+LVNNAG T +        G  EE         T 
Sbjct: 57  SLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQV--------GAFEE--------TTE 100
Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
                  + +  G  R+  AL+P  +   S  +VN+SS  G+L +          +  E 
Sbjct: 101 RELRDLFELHVFGPARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQ 160
Query: 182 LTEERVDEV 190
           L+E   DEV
Sbjct: 161 LSEGLADEV 169

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 97/247 (39%), Gaps = 65/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN     L+V 
Sbjct: 10  KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKGXALNVT 65
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P +I +V   I   FG +DILVNNAGIT      D L    +E           E    
Sbjct: 66  NPESIEAVLKAITDEFGGVDILVNNAGIT-----RDNLLXRXKE-----------EEWSD 109
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             +TN     R+ +A++         RI+NV S +G                        
Sbjct: 110 IXETNLTSIFRLSKAVLRGXXKKRQGRIINVGSVVG------------------------ 145
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                             T G  A  A Y  +KA +  +T+  A++  +    +N V PG
Sbjct: 146 ------------------TXG-NAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPG 186
Query: 245 YVKTEMT 251
           +++T+ T
Sbjct: 187 FIETDXT 193

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 96/248 (38%), Gaps = 75/248 (30%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH-QLDV 65
           R  +VTG N+GIG  + ++LA +G    +T R              SG    +F  + DV
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRG-------------SGAPKGLFGVECDV 62
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D  A+      +  H G +++LV+NA   G+S+DA     F+        M  T E  E
Sbjct: 63  TDSDAVDRAFTAVEEHQGPVEVLVSNA---GLSADA-----FL--------MRMTEEKFE 106
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K +  N  GA R+ +     +Q +   R++ + S       V+  W  G           
Sbjct: 107 KVINANLTGAFRVAQRASRSMQRNKFGRMIFIGS-------VSGSWGIG----------- 148
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                                    N A Y  SKA +    R +A++    N   N V P
Sbjct: 149 -------------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAP 183
Query: 244 GYVKTEMT 251
           GY+ T+MT
Sbjct: 184 GYIDTDMT 191

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 30/198 (15%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVI 59
           M+  + + AVVTGA++GIG  + R+L   G   VLTARD EK  L AVE+   +      
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEK--LRAVEREIVAAGGEAE 81
Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
            H  D++   AI + A  + +  G+ D+LVNNAG+           G+       G    
Sbjct: 82  SHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV-----------GWF------GGPLH 124
Query: 120 TYESAE--KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK------LMYVTHEW 171
           T + AE    +  N      +  A  P +  +    I+N+SS  GK        Y   +W
Sbjct: 125 TMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKW 184
Query: 172 A-KGVF-SDAENLTEERV 187
              G+  S AE L + +V
Sbjct: 185 GLNGLMTSAAEELRQHQV 202

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 35/217 (16%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD----NVIFHQ 62
           + AV+TGA++GIG  + R LA +G    L AR     ++ +EK+ H         V +H 
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARS----VDRLEKIAHELMQEQGVEVFYHH 80
Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
           LDV+   ++   +  +   FG +D++V NAG+                G  +     + E
Sbjct: 81  LDVSKAESVEEFSKKVLERFGDVDVVVANAGL----------------GYFKRLEELSEE 124
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM-----YVTHEWAKGVFS 177
              + ++ N LG  R  +A +  L+ +    +V  S    +L+     YV+ +WA     
Sbjct: 125 EFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALV 184
Query: 178 DAENLTEERV------DEVLSQYLNDYKEGSPETKGW 208
               +    V         +  Y    K G P+ KG+
Sbjct: 185 RTFQIENPDVRFFELRPGAVDTYFGGSKPGKPKEKGY 221

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 35/217 (16%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD----NVIFHQ 62
           + AV+TGA++GIG  + R LA +G    L AR     ++ +EK+ H         V +H 
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARS----VDRLEKIAHELMQEQGVEVFYHH 58
Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
           LDV+   ++   +  +   FG +D++V NAG+                G  +     + E
Sbjct: 59  LDVSKAESVEEFSKKVLERFGDVDVVVANAGL----------------GYFKRLEELSEE 102
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM-----YVTHEWAKGVFS 177
              + ++ N LG  R  +A +  L+ +    +V  S    +L+     YV+ +WA     
Sbjct: 103 EFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALV 162
Query: 178 DAENL--TEERVDEV----LSQYLNDYKEGSPETKGW 208
               +   + R  E+    +  Y    K G P+ KG+
Sbjct: 163 RTFQIENPDVRFFELRPGAVDTYFGGSKPGKPKEKGY 199

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +  +LA +G   V+    +    E V     +     +  Q DV+
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 87
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVA---RGKMTQTYES 123
           DPAA+  +       FG +D+LVNNAGI  +++ A+T     +  +A   +G      E+
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTTIAETGDAVFDRVIAVNLKGTFNTLREA 147
Query: 124 AEKC 127
           A++ 
Sbjct: 148 AQRL 151

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 99/248 (39%), Gaps = 61/248 (24%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R+A++T   KG+G +V  +L   G    +T   +   +E +++      + + F Q DV 
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT 67
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE- 125
               +H + +   SHFGK+D L+NNAG             ++ E   R K+   YE  E 
Sbjct: 68  KKEDLHKIVEEAMSHFGKIDFLINNAG------------PYVFE---RKKLVD-YEEDEW 111
Query: 126 -KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            + +Q N      + + ++P+++  +  RI+N                            
Sbjct: 112 NEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGF------------------------- 146
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                          +G+    GW    +A+  +K  + + T+ +A +   + I  N VC
Sbjct: 147 ---------------QGADSAPGWIYR-SAFAAAKVGLVSLTKTVAYEEAEYGITANMVC 190
Query: 243 PGYVKTEM 250
           PG +  EM
Sbjct: 191 PGDIIGEM 198

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 96/253 (37%), Gaps = 71/253 (28%)
Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNV 58
           AE   + A++TGA  GIG E  R LA  G   ++  L   D  G   +V +         
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR-------GA 59
Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
           + H +D+ +  ++ ++ DF    FG+LDI+ NNA     S  AD L            +T
Sbjct: 60  VHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNA---AHSDPADML------------VT 104
Query: 119 Q-TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
           Q T +  +     N  G   MC+  IP L  +    IVN+SS+     Y           
Sbjct: 105 QMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY----------- 153
Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC 237
                                             + AY  +KAA+   TR +A +Y    
Sbjct: 154 --------------------------------DMSTAYACTKAAIETLTRYVATQYGRHG 181
Query: 238 INC--VCPGYVKT 248
           + C  + PG V+T
Sbjct: 182 VRCNAIAPGLVRT 194

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 62/261 (23%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AV+TG++ GIG  +    A  G   VL AR      EA   LK      V+   +DVA
Sbjct: 8   KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA 67
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
            P  + +V + +RS FG  DILVNNAG    +   +T+            M    E  + 
Sbjct: 68  TPEGVDAVVESVRSSFGGADILVNNAG----TGSNETI------------MEAADEKWQF 111
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + + + A R+   L+P ++      I++ +S    +  V   W + +++         
Sbjct: 112 YWELHVMAAVRLARGLVPGMRARGGGAIIHNAS----ICAVQPLWYEPIYN--------- 158
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                                         ++KAA+  +++ LA +    N  +NC+ PG
Sbjct: 159 ------------------------------VTKAALMMFSKTLATEVIKDNIRVNCINPG 188
Query: 245 YVKT-EMTYNAGRLTVEEGAE 264
            + T +    A  LT + G +
Sbjct: 189 LILTPDWIKTAKELTKDNGGD 209

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 27/184 (14%)
Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           K+  V+TGA+ GIG  + R+ +  G   +L AR        VE+LK     N +  Q+DV
Sbjct: 16  KKLVVITGASSGIGEAIARRFSEEGHPLLLLARR-------VERLKALNLPNTLCAQVDV 68
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D     +        +G  D +VNNAG+         L G I+        TQ     +
Sbjct: 69  TDKYTFDTAITRAEKIYGPADAIVNNAGMM--------LLGQID--------TQEANEWQ 112
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKG----VFSDAEN 181
           +    N LG     +A++  ++  +   I+N+SS  GK  +  H    G    V + +EN
Sbjct: 113 RMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISEN 172
Query: 182 LTEE 185
           + EE
Sbjct: 173 VREE 176

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 63/248 (25%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  +  QLA  G    +     K   EAV E++K  G D+    Q +V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI-QANV 63
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           AD   + +    + S FG LD+LVNNAGIT      D L    +E           +  +
Sbjct: 64  ADADEVKAXIKEVVSQFGSLDVLVNNAGIT-----RDNLLXRXKE-----------QEWD 107
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN  G     +   P      S  I+N+SS +G +                     
Sbjct: 108 DVIDTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAV--------------------- 146
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCP 243
                          G+P         A Y+ +KA +   T+  A++  +    +N V P
Sbjct: 147 ---------------GNP-------GQANYVATKAGVIGLTKSAARELASRGITVNAVAP 184
Query: 244 GYVKTEMT 251
           G++ ++ T
Sbjct: 185 GFIVSDXT 192

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 25/185 (13%)
Query: 5   AKRYAVVTGANKGIGYEVVRQL--ALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH- 61
           AK+  ++TGA+ GIG     +   A NG + ++ A      LE ++K     F N   H 
Sbjct: 32  AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHV 91
Query: 62  -QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            QLD+     I    + +   F  +DILVNNAG   + SD             R     T
Sbjct: 92  AQLDITQAEKIKPFIENLPQEFKDIDILVNNAG-KALGSD-------------RVGQIAT 137
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT------HEWAKG 174
            E  +    TN      + +A++P+ Q  +S  IVN+ S  G+  Y T       ++A G
Sbjct: 138 -EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVG 196
Query: 175 VFSDA 179
            F+D+
Sbjct: 197 AFTDS 201

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 46/87 (52%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + AV+TG++ GIG  +    A  G   VL AR      EA   LK      V+   +DVA
Sbjct: 8  KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA 67
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAG 93
           P  + +V + +RS FG  DILVNNAG
Sbjct: 68 TPEGVDAVVESVRSSFGGADILVNNAG 94

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           +VTGA  G G  + R+    G   + T R +    E +++LK    DN+   QLDV + A
Sbjct: 4   LVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRNRA 59
Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
           AI  +   + + +  +DILVNNAG+      A   S                E  E  + 
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKAS---------------VEDWETMID 104
Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
           TN  G   M  A++P +   +   I+N+ S+ G   Y
Sbjct: 105 TNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY 141

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 105/252 (41%), Gaps = 70/252 (27%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           R A++TGA++GIG  +  +LA +G  + +   ++ +   E  E+ +  G   V     ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61
Query: 66  ----ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
               A  A +H  A+ +    G LD LVNNAGIT      DTL   +++           
Sbjct: 62  LEAEAATALVHQAAEVL----GGLDTLVNNAGIT-----RDTLLVRMKD----------- 101
Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           E  E  L+ N     R     + L+  +   RIVN++S +G L                 
Sbjct: 102 EDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGIL----------------- 144
Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCIN 239
                              G+P         A Y+ SKA +  +TR +AK+Y      +N
Sbjct: 145 -------------------GNP-------GQANYVASKAGLIGFTRAVAKEYAQRGITVN 178
Query: 240 CVCPGYVKTEMT 251
            V PG+++TEMT
Sbjct: 179 AVAPGFIETEMT 190

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 68/254 (26%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A R A+VTG ++GIG  + + L   G    + ARD +   +   +L   G    I    D
Sbjct: 28  AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAI--PAD 85
Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYES 123
           ++  A    +A  +     +LDILVNNAG + G + ++  +SG+                
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGW---------------- 129
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDS----ARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
            EK +Q N        + L+PLL+ S S    AR++N+ S              G+ +  
Sbjct: 130 -EKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGS------------VAGISAMG 176
Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC 237
           E                               A AY  SKAA++  +R+LAK+    +  
Sbjct: 177 E------------------------------QAYAYGPSKAALHQLSRMLAKELVGEHIN 206
Query: 238 INCVCPGYVKTEMT 251
           +N + PG   + MT
Sbjct: 207 VNVIAPGRFPSRMT 220

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 16/164 (9%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M + + R  +VTG  KGIG  +    A  G    + AR  +       +L   G  NVI 
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIG 95
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            +LDV+DP +    A  +   FG LD++  NAGI            F E   AR   T T
Sbjct: 96  VRLDVSDPGSCADAARTVVDAFGALDVVCANAGI------------FPE---ARLD-TMT 139
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            E   + L  N  G     +A +  L  S   R++  SS  G +
Sbjct: 140 PEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV 183

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 95/250 (38%), Gaps = 71/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD---NVIFHQL 63
           R A+VTGA  GIG  + R     G I  L    E       +KLK    D   +V     
Sbjct: 28  RKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE-------DKLKEIAADLGKDVFVFSA 80
Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           +++D  +I  +A+        +DILVNNAGIT              +G+      Q ++ 
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGIT-------------RDGLFVRMQDQDWDD 127
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
               L  N   A  +   LI  +      RI+N++S +G +                   
Sbjct: 128 ---VLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVV------------------- 165
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                            G+P    + A       +KA +  +++ LA++    N  +NC+
Sbjct: 166 -----------------GNPGQTNYCA-------AKAGLIGFSKALAQEIASRNITVNCI 201
Query: 242 CPGYVKTEMT 251
            PG++K+ MT
Sbjct: 202 APGFIKSAMT 211

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLD 64
          + A+VTGA +GIG      L L G    L   + + G++    L H  F+    +F Q D
Sbjct: 8  KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAAL-HEQFEPQKTLFIQCD 66
Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAGIT 95
          VAD   +      +  HFG+LDILVNNAG+ 
Sbjct: 67 VADQQQLRDTFRKVVDHFGRLDILVNNAGVN 97

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   R A+VTGA  G+G  + R L   G I  L    E    E +++L     + +  
Sbjct: 5   MFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTRE----EKLKELAAELGERIFV 60
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              +++D  A+ ++        G +DILVNNAGIT      D L  F+           +
Sbjct: 61  FPANLSDREAVKALGQKAEEEMGGVDILVNNAGIT-----RDGL--FVR---------MS 104
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  +  L  N      +   L   +    + RI+N++S +G    VT            
Sbjct: 105 DEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIVG----VT------------ 148
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                               G+P         A Y  SKA +  +++ LA++    N  +
Sbjct: 149 --------------------GNP-------GQANYCASKAGLIGFSKSLAQEIASRNVTV 181
Query: 239 NCVCPGYVKTEMT 251
           NC+ PG++++ MT
Sbjct: 182 NCIAPGFIESAMT 194

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDE------KGGLEAVE---K 49
           M     + A +TGA +G G     +LA +G  I+ +   R +      +G  E ++   +
Sbjct: 41  MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVR 100
Query: 50  LKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIE 109
           L       +I  Q DV D A++ +V D   + FG +DILV+N    GIS+  + +S    
Sbjct: 101 LVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSN---VGISNQGEVVS---- 153
Query: 110 EGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLG 162
                     T +     LQTN +GA   C A++P +++      ++ VSS++G
Sbjct: 154 ---------LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG 198

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 65/253 (25%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   R A+VTGA  G+G  + R L   G I  L    E    E +++L     + +  
Sbjct: 2   MFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTRE----EKLKELAAELGERIFV 57
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              +++D  A+ ++        G +DILVNNAGIT      D L  F+           +
Sbjct: 58  FPANLSDREAVKALGQKAEEEMGGVDILVNNAGIT-----RDGL--FVR---------MS 101
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  +  L  N      +   L   +    + RI+N++S +G    VT            
Sbjct: 102 DEDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSIVG----VT------------ 145
Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                               G+P         A Y  SKA +  +++ LA++    N  +
Sbjct: 146 --------------------GNP-------GQANYCASKAGLIGFSKSLAQEIASRNVTV 178
Query: 239 NCVCPGYVKTEMT 251
           NC+ PG++++ MT
Sbjct: 179 NCIAPGFIESAMT 191

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 62/247 (25%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG E+ + LA +    +  +R +K     V+++K  G+++  +   DV+
Sbjct: 45  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG-DVS 103
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               I  V + I +    +DILVNNAGIT      D L            +    +  E 
Sbjct: 104 KKEEISEVINKILTEHKNVDILVNNAGIT-----RDNLF-----------LRMKNDEWED 147
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+TN      + + +   +  +   RI+N+SS +G    V                   
Sbjct: 148 VLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQ----------------- 190
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                                     A Y  SKA +  +T+ LAK+    N  +N + PG
Sbjct: 191 --------------------------ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPG 224
Query: 245 YVKTEMT 251
           ++ ++MT
Sbjct: 225 FISSDMT 231

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 95/247 (38%), Gaps = 64/247 (25%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AV+TG   GIG  +  + A+ G    +   D     EA   +++ G   V+  + DV+
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIA--DLVPAPEAEAAIRNLG-RRVLTVKCDVS 64
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
            P  + +    + S FG+ DILVNNAGI         L  F E          T+E  +K
Sbjct: 65  QPGDVEAFGKQVISTFGRCDILVNNAGIY-------PLIPFDE---------LTFEQWKK 108
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N      M +A +P ++ +   RI+N++S        T  W K             
Sbjct: 109 TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTS--------TTYWLK------------- 147
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
               +  Y +                  YI +KAA   +TR LA         +N + P 
Sbjct: 148 ----IEAYTH------------------YISTKAANIGFTRALASDLGKDGITVNAIAPS 185
Query: 245 YVKTEMT 251
            V+T  T
Sbjct: 186 LVRTATT 192

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 67/275 (24%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTG  + IG   V  LA  G   ++   DE    +AVE L+  G D V    +DV 
Sbjct: 14  RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMDVT 72
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +  ++ +    +    G++DILV  AGI         +S    E +  G+         K
Sbjct: 73  NTESVQNAVRSVHEQEGRVDILVACAGI--------CISEVKAEDMTDGQWL-------K 117
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G  R C+A                   +G++M    E  +GV     +++   
Sbjct: 118 QVDINLNGMFRSCQA-------------------VGRIML---EQKQGVIVAIGSMSGLI 155
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
           V+                    P   AAY  SKA ++ Y R LA ++    I  N V P 
Sbjct: 156 VNR-------------------PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPT 196
Query: 245 YVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           Y++T +T    R  +E+      W+A    G P G
Sbjct: 197 YIETTLT----RFGMEKPELYDAWIA----GTPMG 223

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 96/250 (38%), Gaps = 70/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV- 65
           + AVVTGA +GIG  +    A +G   V  A D  G  E ++++        +   LDV 
Sbjct: 214 KVAVVTGAARGIGATIAEVFARDGATVV--AIDVDGAAEDLKRVADKVGGTAL--TLDVT 269
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           AD A     A     H GK+DILVNNAGIT      D L   ++E           +  +
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGIT-----RDKLLANMDE-----------KRWD 313
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             +  N L  +R+ E L+    + +  R++ +SS  G                A N  + 
Sbjct: 314 AVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI---------------AGNRGQT 358
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAM----NAYTRILAKKYPNFCINCV 241
                                        Y  +KA M     A   +LA K     IN V
Sbjct: 359 N----------------------------YATTKAGMIGLAEALAPVLADK--GITINAV 388
Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 389 APGFIETKMT 398

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          + A+VTG+++G+G     +LA NG   V+  AR +K  LE  E+++  G   V+  + +V
Sbjct: 5  KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKANV 63
Query: 66 ADPAAIHSVADFIRSHFGKLDILVNNA 92
            PA I  +   I   FG+LD+ VNNA
Sbjct: 64 GQPAKIKEMFQQIDETFGRLDVFVNNA 90

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG ++GIGY +V +LA  G      +R++K   + + + +  GF  V     D++  
Sbjct: 11  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSR 69
Query: 69  AAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           +    + + + +HF GKL+ILVNNAGI       D                 T E     
Sbjct: 70  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKD----------------YTVEDYSLI 113
Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
           +  N+  A  +     P L+ S+   +V +SS  G L
Sbjct: 114 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 150

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG ++GIGY +V +LA  G      +R++K   + + + +  GF  V     D++  
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGF-KVEASVCDLSSR 70
Query: 69  AAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           +    + + + +HF GKL+ILVNNAGI       D                 T E     
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKD----------------YTVEDYSLI 114
Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
           +  N+  A  +     P L+ S+   +V +SS  G L
Sbjct: 115 MSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 151

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 94/250 (37%), Gaps = 70/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG  +    A +G   V  A D +   E + +         ++  LDV 
Sbjct: 206 KVAIVTGAARGIGATIAEVFARDGAHVV--AIDVESAAENLAETASKVGGTALW--LDVT 261
Query: 67  DPAAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA- 124
              A+  +++ +R H G K DILVNNAGIT                  R K+    + A 
Sbjct: 262 ADDAVDKISEHLRDHHGGKADILVNNAGIT------------------RDKLLANMDDAR 303
Query: 125 -EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N L   R+ E L+    + +  R++ +SS  G                A N  
Sbjct: 304 WDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGI---------------AGNRG 348
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
           +                              Y  +KA M   T+ LA         IN V
Sbjct: 349 QTN----------------------------YATTKAGMIGITQALAPGLAAKGITINAV 380
Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 381 APGFIETQMT 390

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 94/250 (37%), Gaps = 70/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG  +    A +G   V  A D +   E + +         ++  LDV 
Sbjct: 235 KVAIVTGAARGIGATIAEVFARDGAHVV--AIDVESAAENLAETASKVGGTALW--LDVT 290
Query: 67  DPAAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA- 124
              A+  +++ +R H G K DILVNNAGIT                  R K+    + A 
Sbjct: 291 ADDAVDKISEHLRDHHGGKADILVNNAGIT------------------RDKLLANMDDAR 332
Query: 125 -EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N L   R+ E L+    + +  R++ +SS  G                A N  
Sbjct: 333 WDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGI---------------AGNRG 377
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
           +                              Y  +KA M   T+ LA         IN V
Sbjct: 378 QTN----------------------------YATTKAGMIGITQALAPGLAAKGITINAV 409
Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 410 APGFIETQMT 419

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 94/250 (37%), Gaps = 70/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG  +    A +G   V  A D +   E + +         ++  LDV 
Sbjct: 222 KVAIVTGAARGIGATIAEVFARDGAHVV--AIDVESAAENLAETASKVGGTALW--LDVT 277
Query: 67  DPAAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA- 124
              A+  +++ +R H G K DILVNNAGIT                  R K+    + A 
Sbjct: 278 ADDAVDKISEHLRDHHGGKADILVNNAGIT------------------RDKLLANMDDAR 319
Query: 125 -EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N L   R+ E L+    + +  R++ +SS  G                A N  
Sbjct: 320 WDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGI---------------AGNRG 364
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
           +                              Y  +KA M   T+ LA         IN V
Sbjct: 365 QTN----------------------------YATTKAGMIGITQALAPGLAAKGITINAV 396
Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 397 APGFIETQMT 406

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 94/250 (37%), Gaps = 70/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG  +    A +G   V  A D +   E + +         ++  LDV 
Sbjct: 198 KVAIVTGAARGIGATIAEVFARDGAHVV--AIDVESAAENLAETASKVGGTALW--LDVT 253
Query: 67  DPAAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA- 124
              A+  +++ +R H G K DILVNNAGIT                  R K+    + A 
Sbjct: 254 ADDAVDKISEHLRDHHGGKADILVNNAGIT------------------RDKLLANMDDAR 295
Query: 125 -EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N L   R+ E L+    + +  R++ +SS  G                A N  
Sbjct: 296 WDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGI---------------AGNRG 340
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
           +                              Y  +KA M   T+ LA         IN V
Sbjct: 341 QTN----------------------------YATTKAGMIGITQALAPGLAAKGITINAV 372
Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 373 APGFIETQMT 382

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 94/250 (37%), Gaps = 70/250 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG  +    A +G   V  A D +   E + +         ++  LDV 
Sbjct: 214 KVAIVTGAARGIGATIAEVFARDGAHVV--AIDVESAAENLAETASKVGGTALW--LDVT 269
Query: 67  DPAAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA- 124
              A+  +++ +R H G K DILVNNAGIT                  R K+    + A 
Sbjct: 270 ADDAVDKISEHLRDHHGGKADILVNNAGIT------------------RDKLLANMDDAR 311
Query: 125 -EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N L   R+ E L+    + +  R++ +SS  G                A N  
Sbjct: 312 WDAVLAVNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGI---------------AGNRG 356
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
           +                              Y  +KA M   T+ LA         IN V
Sbjct: 357 QTN----------------------------YATTKAGMIGITQALAPGLAAKGITINAV 388
Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 389 APGFIETQMT 398

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 92/249 (36%), Gaps = 66/249 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVIFHQLDV 65
           + AVVTG+  GIG  +   LA  G   VL    +   +E V   L       V++   D+
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL 64
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI--TGISSDADTLSGFIEEGVARGKMTQTYES 123
           +   A+  + D      G++DILVNNAGI  T +  D  T                  E 
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT------------------EK 106
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N         A +P ++     RI+N++S+ G +                   
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA------------------ 148
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                                     AN +AY+ +K  +  +T++ A +     I  N +
Sbjct: 149 -------------------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAI 183
Query: 242 CPGYVKTEM 250
           CPG+V+T +
Sbjct: 184 CPGWVRTPL 192

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 99/252 (39%), Gaps = 62/252 (24%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTGA+ GIG E     A  G   +L  R+E+      + +         +  LD+ 
Sbjct: 15  RIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLL 74
Query: 67  DPAA--IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
              A     VAD I +H+ +LD +++NAG+ G            E G    +  Q ++  
Sbjct: 75  TCTAEECRQVADRIAAHYPRLDGVLHNAGLLG------------EIGPMSEQDPQIWQD- 121
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
              +Q N      + +AL+PLL  SD+  +V  SSS+G                      
Sbjct: 122 --VMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG---------------------- 157
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVC 242
                         ++G        AN  AY  SK A     ++LA +Y N    +NC+ 
Sbjct: 158 --------------RQGR-------ANWGAYATSKFATEGMMQVLADEYQNRSLRVNCIN 196
Query: 243 PGYVKTEMTYNA 254
           PG  +T M  +A
Sbjct: 197 PGGTRTSMRASA 208

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 96/247 (38%), Gaps = 61/247 (24%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTGA++GIG  +  +LA  G    +      G  + V     +        + DV+
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS 88
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             + + ++   +   +G+LD+LVNNAGIT      DTL            +    +  + 
Sbjct: 89  QESEVEALFAAVIERWGRLDVLVNNAGIT-----RDTL-----------LLRMKRDDWQS 132
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L  N  G      A   ++    S RI+N++S +G++                      
Sbjct: 133 VLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEM---------------------- 170
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCVCPG 244
                         G+P         A Y  +KA +   T+ +AK+  +    +N V PG
Sbjct: 171 --------------GNP-------GQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPG 209
Query: 245 YVKTEMT 251
           ++ T+MT
Sbjct: 210 FIATDMT 216

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 91/257 (35%), Gaps = 82/257 (31%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVL----------TARDEKGGLEAVEKLKHSGFD 56
           + AV+TG+  GIG  + R LA  G   VL          T  DE  GL +          
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSS---------G 76
Query: 57  NVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
            V+ H  D   P+ I      +   FG  DILVNNAG+            F+E      K
Sbjct: 77  TVLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQ-----------FVE------K 119
Query: 117 MTQ-TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
           +     E  ++ +  N   +       IP  +     RI+N++S+ G +           
Sbjct: 120 IEDFPVEQWDRIIAVNLSSSFHTIRGAIPPXKKKGWGRIINIASAHGLVA---------- 169
Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-- 233
                               + +K             +AY+ +K  +   T+ +A +   
Sbjct: 170 --------------------SPFK-------------SAYVAAKHGIXGLTKTVALEVAE 196
Query: 234 PNFCINCVCPGYVKTEM 250
               +N +CPGYV T +
Sbjct: 197 SGVTVNSICPGYVLTPL 213

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 99/249 (39%), Gaps = 63/249 (25%)
Query: 10  VVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           VVTGA++GIG  +   L   G  + V  AR  K   E  ++++  G   + F   DV+  
Sbjct: 5   VVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG-DVSKE 63
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A + ++       +G +D++VNNAGIT      DTL       + R K +Q  E     +
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVNNAGIT-----RDTL-------LIRMKKSQWDE----VI 107
Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G     +A   ++      RI+N++S +G +  +                     
Sbjct: 108 DLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQ------------------- 148
Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGYV 246
                                   A Y  +KA +  +++  A++    N  +N VCPG++
Sbjct: 149 ------------------------ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFI 184
Query: 247 KTEMTYNAG 255
            ++MT   G
Sbjct: 185 ASDMTAKLG 193

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 100/251 (39%), Gaps = 65/251 (25%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQ 62
           A + A+VT +  GIG+ + R+LA +G   V+++R ++   +AV  L+  G      + H 
Sbjct: 14  ANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHV 73
Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
               D   +  VA  ++ H G +DILV+NA +       +   G I        M  T E
Sbjct: 74  GKAEDRERL--VATAVKLH-GGIDILVSNAAV-------NPFFGSI--------MDVTEE 115
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             +K L  N      M +A++P ++      +V VSS                FS +   
Sbjct: 116 VWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSS-------------IAAFSPSPGF 162
Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINC 240
                              SP           Y +SK A+   T+ LA +    N  +NC
Sbjct: 163 -------------------SP-----------YNVSKTALLGLTKTLAIELAPRNIRVNC 192
Query: 241 VCPGYVKTEMT 251
           + PG +KT  +
Sbjct: 193 LAPGLIKTSFS 203

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 92/249 (36%), Gaps = 66/249 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVIFHQLDV 65
           + AVVTG+  GIG  +   LA  G   VL    +   +E V   L       V++   D+
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL 64
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI--TGISSDADTLSGFIEEGVARGKMTQTYES 123
           +   A+  + D      G++DILVNNAGI  T +  D  T                  E 
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT------------------EK 106
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N         A +P ++     RI+N++S+ G +                   
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA------------------ 148
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                                     AN +AY+ +K  +  +T++ A +     I  N +
Sbjct: 149 -------------------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAI 183
Query: 242 CPGYVKTEM 250
           CPG+V++ +
Sbjct: 184 CPGWVRSPL 192

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 91/249 (36%), Gaps = 66/249 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-LKHSGFDNVIFHQLDV 65
           + AVVTG+  GIG  +   LA  G   VL    +   +E V   L       V++   D+
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL 64
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI--TGISSDADTLSGFIEEGVARGKMTQTYES 123
           +   A+  + D      G++DILVNNAGI  T +  D  T                  E 
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPT------------------EK 106
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  L  N         A +P ++     RI+N++S+ G +                   
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA------------------ 148
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                                     AN +AY+ +K  +  +T++ A +     I  N +
Sbjct: 149 -------------------------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAI 183
Query: 242 CPGYVKTEM 250
           CPG+V+  +
Sbjct: 184 CPGWVRAPL 192

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 97/249 (38%), Gaps = 63/249 (25%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVL-TARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           ++R A VTG   GIG  + ++L  +G   V     +    ++ +E  K  GFD     + 
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFD-FYASEG 70
Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           +V D  +     D +++  G++D+LVNNAGIT                V   KMT+  E 
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT--------------RDVVFRKMTR--ED 114
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            +  + TN      + + +I  +      RI+N+SS  G+         KG F       
Sbjct: 115 WQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQ---------KGQFGQTN--- 162
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FCINCV 241
                                          Y  +KA ++ +T  LA++       +N V
Sbjct: 163 -------------------------------YSTAKAGIHGFTMSLAQEVATKGVTVNTV 191
Query: 242 CPGYVKTEM 250
            PGY+ T+M
Sbjct: 192 SPGYIGTDM 200

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 25/167 (14%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG+  GIG  + + LA  G   VL    +     A+ ++   G    + H  D++
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGV-KAVHHPADLS 61
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A I ++       FG +DILVNNAGI  ++         +E+           ES +K
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHVAP--------VEQ--------FPLESWDK 105
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS------SLGKLMYV 167
            +  N           +P ++  +  RI+N++S      S GK  YV
Sbjct: 106 IIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYV 152

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 6  KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          ++ A+VTGA++GIG+EV   LA  G   V TA  +    +     K  GF       L++
Sbjct: 5  EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGL-VLNI 63
Query: 66 ADPAAIHSVADFIRSHFGKLDILVNNAGIT 95
          +D  +I +    I++    +DILVNNAGIT
Sbjct: 64 SDIESIQNFFAEIKAENLAIDILVNNAGIT 93

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 18/155 (11%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG +KGIGY +V +LA  G      +R+EK   E +E  +  G  NV     D+   
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSR 82
Query: 69  AAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
                +   +   F GKL+ILVNNAG+  I  +A                  T +     
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNAGVV-IHKEAKDF---------------TEKDYNII 126
Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
           + TN+  A  + +   PLL+ S +  ++ +SS  G
Sbjct: 127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG 161

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           R A+VTGA+ GIG  V R L   G+  V  AR      E   + K +G+   +I ++ D+
Sbjct: 33  RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL 92
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI 94
           ++   I S+   IRS    +DI +NNAG+
Sbjct: 93  SNEEDILSMFSAIRSQHSGVDICINNAGL 121

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNV 58
           M   A++ A++TG++ GIG       A  G    +T R  +   E  +++  +G    NV
Sbjct: 1   MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNV 60
Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
                DV   A    +       FGKLDILVNNAG              I +  ++    
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAG------------AAIPDSQSKTGTA 108
Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           Q+ ES +  L  N      + +  +P L  S    IVN+SS
Sbjct: 109 QSIESYDATLNLNLRSVIALTKKAVPHLS-STKGEIVNISS 148

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 92/254 (36%), Gaps = 72/254 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA+ GIG  +  +    G   +  +  + G          + +D++   + DV 
Sbjct: 9   KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHI---ECDVT 56
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P  + +  D I   +G + +LVNNAGI           G IE        + +     +
Sbjct: 57  NPDQVKASIDHIFKEYGSISVLVNNAGIESY--------GKIE--------SMSMGEWRR 100
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G     +  IP +  S    IVN+SS    ++                     
Sbjct: 101 IIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII--------------------- 139
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGY 245
                             TK    NA+AY+ SK A+   T+ +A  Y P    N VCP  
Sbjct: 140 ------------------TK----NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPAT 177
Query: 246 VKTEMTYNAGRLTV 259
           + T +   A  L V
Sbjct: 178 IDTPLVRKAAELEV 191

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 96/248 (38%), Gaps = 61/248 (24%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           AKR A VTG   G+G  + R+L   G+   ++  +    +      +     +   + +D
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83
Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           VAD  +    A+ + + FGK+D+L+NNAGIT    DA  +           KMT+    A
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGIT---RDATFM-----------KMTKGDWDA 129
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
              ++T+      + +  I  +      RIVN+ S  G         ++G F  A     
Sbjct: 130 --VMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG---------SRGAFGQAN---- 174
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                                         Y  +KA ++ +T+ LA +       +N V 
Sbjct: 175 ------------------------------YASAKAGIHGFTKTLALETAKRGITVNTVS 204
Query: 243 PGYVKTEM 250
           PGY+ T M
Sbjct: 205 PGYLATAM 212

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 92/254 (36%), Gaps = 72/254 (28%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA+ GIG  +  +    G   +  +  + G          + +D++   + DV 
Sbjct: 16  KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHI---ECDVT 63
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P  + +  D I   +G + +LVNNAGI           G IE        + +     +
Sbjct: 64  NPDQVKASIDHIFKEYGSISVLVNNAGIESY--------GKIE--------SMSMGEWRR 107
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G     +  IP +  S    IVN+SS    ++                     
Sbjct: 108 IIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASII--------------------- 146
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGY 245
                             TK    NA+AY+ SK A+   T+ +A  Y P    N VCP  
Sbjct: 147 ------------------TK----NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPAT 184
Query: 246 VKTEMTYNAGRLTV 259
           + T +   A  L V
Sbjct: 185 IDTPLVRKAAELEV 198

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
          + A+VTG  +GIG  +  +LA +G  I      + E+   E + KL  +     +F  LD
Sbjct: 3  KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-KLIEAADQKAVFVGLD 61
Query: 65 VADPAAIHSVADFIRSHFGKLDILVNNAGITGI 97
          V D A   S  D      G  D+LVNNAGI  I
Sbjct: 62 VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQI 94

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A +TG   GIG+ +      +G  TV+ +R     L A  KL  +     +   +DV 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNA 92
            P A+ +  D     FG++DIL+N A
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCA 113

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + A++TGA  GIG E+    A  G   V++  +       V++++  G       + D+ 
Sbjct: 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDIT 70
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAG 93
              + ++ADF  S  GK+DILVNNAG
Sbjct: 71 SEQELSALADFAISKLGKVDILVNNAG 97

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           +  ++TG  +G+G E  RQ    G   VL    DE+G   A E       D   +  LDV
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDV 60
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI-TGISSDADTLSGFIEEGVARGKMTQTYESA 124
                   V  + R  FG +D LVNNAGI TG+         F+E        T++ E  
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM---------FLE--------TESVERF 103
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            K ++ N  G     + +IP ++ +    IVN+SS+ G +
Sbjct: 104 RKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM 143

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           +  ++TG  +G+G E  RQ    G   VL    DE+G   A E       D   +  LDV
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDV 60
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGI-TGISSDADTLSGFIEEGVARGKMTQTYESA 124
                   V  + R  FG +D LVNNAGI TG+         F+E        T++ E  
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVNNAGISTGM---------FLE--------TESVERF 103
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            K ++ N  G     + +IP ++ +    IVN+SS+ G +
Sbjct: 104 RKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM 143

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 62/164 (37%), Gaps = 16/164 (9%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   R  VVTG  KGIG  +    A  G    +  R        V  L   G   VI 
Sbjct: 5   MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIG 64
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q DV+D A   ++A      FG +D++  NAG+            F +  +A    T T
Sbjct: 65  VQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV------------FPDAPLA----TMT 108
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            E        N  G     +A +  L  S S R+V  SS  G +
Sbjct: 109 PEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI 152

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 88/247 (35%), Gaps = 73/247 (29%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTG N+GIG  + R  A  G    +T R  +            GF  V   + D+ 
Sbjct: 22  RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE---------PPEGFLAV---KCDIT 69
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D   +      I    G +++L+ NAG+T      D L            M  + E    
Sbjct: 70  DTEQVEQAYKEIEETHGPVEVLIANAGVT-----KDQL-----------LMRMSEEDFTS 113
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN  G  R+ +     +  +   R+V +SS +G L                      
Sbjct: 114 VVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLL---------------------- 151
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                         GS       A  A Y  SKA +  + R LA++    N   N V PG
Sbjct: 152 --------------GS-------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPG 190
Query: 245 YVKTEMT 251
           +V T+MT
Sbjct: 191 FVDTDMT 197

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 28/170 (16%)
Query: 2   AETAKRYAV------VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF 55
           AE ++R+++      VTG  KGIG+ +V + A  G +    AR+E    E + K +  GF
Sbjct: 4   AEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF 63
Query: 56  DNVIFHQLDVADPAAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVAR 114
             V     D +       +   + S F GKLDIL+NN                   G  R
Sbjct: 64  -QVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNL------------------GAIR 104
Query: 115 GKMTQTYESAEKC--LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
            K T  Y + +    + TN   A  + +   PLL+ S    I+ +SS  G
Sbjct: 105 SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG 154

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 63/161 (39%), Gaps = 21/161 (13%)
Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           E  K   ++TGA++GIG    R L   G    L ARDEK  L+A+     +  +  +   
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEK-RLQALA----AELEGALPLP 56
Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            DV +          +   FG+L  LVNNAG+                GV +     T E
Sbjct: 57  GDVREEGDWARAVAAMEEAFGELSALVNNAGV----------------GVMKPVHELTLE 100
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
                L TN  GA       +P L       IVNV S  GK
Sbjct: 101 EWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGK 141

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 92/243 (37%), Gaps = 64/243 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  V++G    +G  + R+ A  G   VL AR  +  LE V K         +    D+ 
Sbjct: 12  KVVVISGVGPALGTTLARRCAEQGADLVLAARTVER-LEDVAKQVTDTGRRALSVGTDIT 70
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNA-GITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           D A +  + D     +G++D+++NNA  +  +   A+T                T+E   
Sbjct: 71  DDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANT----------------TFEHMR 114
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             ++    GA R+ +   P L+ S  A +VNV+S     M V H  AK            
Sbjct: 115 DAIELTVFGALRLIQGFTPALEESKGA-VVNVNS-----MVVRHSQAK------------ 156
Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP 243
                                       AY ++K+A+ A ++ LA +       +N V P
Sbjct: 157 --------------------------YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP 190
Query: 244 GYV 246
           GY+
Sbjct: 191 GYI 193

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          +  +VTG+  GIG      LA  G   V+   + +   EAV K   +     I   +DV+
Sbjct: 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA-EAVAKQIVADGGTAISVAVDVS 68
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGITG 96
          DP +  ++AD   + FG +D LVNNA I G
Sbjct: 69 DPESAKAMADRTLAEFGGIDYLVNNAAIFG 98

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 94/253 (37%), Gaps = 66/253 (26%)
Query: 10  VVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           +VTG ++GIG  V R  A  G  + V  A + +     V  +  SG + V     DV + 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPG-DVGNA 88
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A I +    +   FG+LD LVNNAGI       D  S                E  E+ L
Sbjct: 89  ADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXS---------------VERIERXL 133
Query: 129 QTNYLGAKRMCEA----LIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           + N  G+  +C A        L       IVNVSS    L   T                
Sbjct: 134 RVNVTGSI-LCAAEAVRRXSRLYSGQGGAIVNVSSXAAILGSAT---------------- 176
Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                   QY++                  Y  SKAA++ +T  LA++       +N V 
Sbjct: 177 --------QYVD------------------YAASKAAIDTFTIGLAREVAAEGIRVNAVR 210
Query: 243 PGYVKTEMTYNAG 255
           PG ++T++  + G
Sbjct: 211 PGIIETDLHASGG 223

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Query: 1  MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVI 59
          + + A R A VTG   G+G  +VRQL   G    +    +    +A+  L+  G    V+
Sbjct: 3  LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62
Query: 60 FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGIT 95
            QLDVA        AD + + FG + IL NNAG+ 
Sbjct: 63 GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVN 98

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 90/250 (36%), Gaps = 68/250 (27%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           + AVVTG+  GIG  +  +LA  G   V+    +   +E       S F     +   D+
Sbjct: 5   KKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLNADL 64
Query: 66  ADPAAIHSVADFIRSH---FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
           +D  A     DFI       G LDILVNNAGI   +         IEE           +
Sbjct: 65  SDAQATR---DFIAKAAEALGGLDILVNNAGIQHTAP--------IEE--------FPVD 105
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
                +  N         A +P++Q     RI+N++S+ G +  V               
Sbjct: 106 KWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASV--------------- 150
Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC-- 240
                                       N +AY+ +K  +   T++ A +     I C  
Sbjct: 151 ----------------------------NKSAYVAAKHGVVGLTKVTALENAGKGITCNA 182
Query: 241 VCPGYVKTEM 250
           +CPG+V+T +
Sbjct: 183 ICPGWVRTPL 192

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 82/247 (33%), Gaps = 66/247 (26%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTG +KGIG  + R L   G    +   D       V  L++ GF      ++DV 
Sbjct: 13  RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFA----VEVDVT 68
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLS---GFIEEGVARGKMTQTYES 123
             A++ +         G  D+L  NAG++ +    D       F  +  ARG       +
Sbjct: 69  KRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIA 128
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
               L +N  G                   IVN +S   K                    
Sbjct: 129 CRHFLASNTKGV------------------IVNTASLAAK-------------------- 150
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP 243
                 V +  L  Y        GW               A  R +A K  N  +NCVCP
Sbjct: 151 ------VGAPLLAHYSASKFAVFGW-------------TQALAREMAPK--NIRVNCVCP 189
Query: 244 GYVKTEM 250
           G+VKT M
Sbjct: 190 GFVKTAM 196

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA  GIG  + ++ ALN  I V     E    + V++L+  G   V+  + DV+
Sbjct: 8   KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-KEVLGVKADVS 66
Query: 67  DPAAIHSVADFIRSHF---GKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYE 122
                  V +F+R  F    ++D+L NNAGI  G++  A+                 + E
Sbjct: 67  KK---KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEV----------------SDE 107
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
             E+ L  N   A     A+IP++       IVN +S  G
Sbjct: 108 LWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG 147

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
           + A+  A+VTG  +GIG  + R LA +G  I +    D +G    + +L   G   VIF 
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-ARVIFL 84
Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSD 100
           + D+AD ++  +  D + + FG++D LVNNAGI  I  D
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRD 123

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 63/155 (40%), Gaps = 19/155 (12%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNV-IFHQL-DVA 66
           AVVTG + GIG   V  L   G      ARD +  L A E      F    +F  + DV 
Sbjct: 11  AVVTGGSSGIGLATVELLLEAGAAVAFCARDGER-LRAAESALRQRFPGARLFASVCDVL 69
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D   + + A+      G   ILVNNAG   +S+ A+T                T E+  +
Sbjct: 70  DALQVRAFAEACERTLGCASILVNNAGQGRVSTFAET----------------TDEAWSE 113
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL 161
            LQ  +        A +P L+    A IV V+S L
Sbjct: 114 ELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLL 148

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           + A + A+VTGA  GIG  V R+LA  G   +    D      A  K+           +
Sbjct: 26  DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGC----GAAACR 81
Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
           +DV+D   I ++ D   + FG +D LV NAG+  ++S  DT                T E
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT----------------TVE 125
Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
             ++ +  N  GA    +   P +       IVN+SS  G++
Sbjct: 126 DFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV 167

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + A++TGA  G G  + ++ A  G   V+  RD+ G     E++     D  +    D++
Sbjct: 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAG----AERVAGEIGDAALAVAADIS 65
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGI 94
            A + +  +   S FGK+DILVNNAGI
Sbjct: 66 KEADVDAAVEAALSKFGKVDILVNNAGI 93

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 63/160 (39%), Gaps = 16/160 (10%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TGA  GIG      LA +G+      R      E  +++  +G    I  + DV+D 
Sbjct: 31  ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDE 89
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
               +    +   FG LDI+V NAGI G+ +  D L  F                 ++ +
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPF---------------EWDETI 134
Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVT 168
             N  G        +P L+      IV VSS  G   + T
Sbjct: 135 AVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTT 174

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG   G+G     +L   G   VL      GG    +KL     +N +F   DV   
Sbjct: 13  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSE 68
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +     +  FG++D+ VN AGI   S   +   G           T T E  ++ L
Sbjct: 69  KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKG----------QTHTLEDFQRVL 118
Query: 129 QTNYLG 134
             N +G
Sbjct: 119 DVNLMG 124

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG   G+G     +L   G   VL      GG    +KL     +N +F   DV   
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSE 70
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +     +  FG++D+ VN AGI   S   +   G           T T E  ++ L
Sbjct: 71  KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKG----------QTHTLEDFQRVL 120
Query: 129 QTNYLG 134
             N +G
Sbjct: 121 DVNLMG 126

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 50/126 (39%), Gaps = 14/126 (11%)
Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG   G+G     +L   G   VL      GG    +KL     +N +F   DV   
Sbjct: 13  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSE 68
Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +     +  FG++D+ VN AGI   S   +   G           T T E  ++ L
Sbjct: 69  KDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKG----------QTHTLEDFQRVL 118
Query: 129 QTNYLG 134
             N +G
Sbjct: 119 DVNLMG 124

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE-------AVEKLKHSGFDNVIFHQL 63
           +TGA++GIG  +  + A +G   V+ A+  +   +       A E+++  G    +   +
Sbjct: 50  ITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-GKALPCIV 108
Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DV D   I +  +     FG +DILVNNA    +++  DT +                + 
Sbjct: 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPT----------------KR 152
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL 161
            +  +  N  G     +A IP L+ S  A I+N+S  L
Sbjct: 153 LDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPL 190

>pdb|1YO6|A Chain A, Crystal Structure Of The Putative Carbonyl Reductase Sniffer Of Caenorhabditis Elegans Length = 250

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 104/260 (40%), Gaps = 54/260 (20%)
Query: 10  VVTGANKGIGYEVVRQLALNGII--TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           VVTGAN+GIG  +V+QL  +  I   + TARD    +E   +LK      V    L V  
Sbjct: 7   VVTGANRGIGLGLVQQLVKDKNIRHIIATARD----VEKATELKSIKDSRVHVLPLTVTC 62
Query: 68  PAAIHSVADFIRSHFGK--LDILVNNAGI-TGISSDADTLSGFIEEGVARGKMTQTYESA 124
             ++ +    +    G   L +L+NNAG+     ++ +     I E +     +    + 
Sbjct: 63  DKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122
Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
           +         +K   +      QLS S A ++ +SS LG +                   
Sbjct: 123 KLLPLLKNAASKESGD------QLSVSRAAVITISSGLGSIT------------------ 158
Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK--KYPNFCINCV 241
                        D   GS +   +P    AY +SKAA+N + R LA   K  N  +   
Sbjct: 159 -------------DNTSGSAQ---FP--VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNF 200
Query: 242 CPGYVKTEMTYNAGRLTVEE 261
           CPG+V+T +      LTVE+
Sbjct: 201 CPGWVQTNLGGKNAALTVEQ 220

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 65/157 (41%), Gaps = 18/157 (11%)
Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           +TGA  G G    R+ A  G   VLT R E+  L+A+   + S    V+   LDV D AA
Sbjct: 26  ITGATSGFGEACARRFAEAGWSLVLTGRREER-LQALAG-ELSAKTRVLPLTLDVRDRAA 83
Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQT 130
             +  D +   F  L  L+NNAG+   +  A +                  +  +  + T
Sbjct: 84  XSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCD---------------LDDWDTXVDT 128
Query: 131 NYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMY 166
           N  G       L+P L+     A IVN+ S  GK  Y
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY 165

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 17/161 (10%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA  + +  ++TG++ GIG       A  G    +T R+E    E  +++  +G      
Sbjct: 21  MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKI 80
Query: 61  HQL--DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
           + +  DV + +    + +   + FGK+DILVNNAG       A+T               
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANT--------------D 126
Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           Q  E  +K  + N+     M +     L +     IVNVSS
Sbjct: 127 QPVELYQKTFKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSS 166

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 6  KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          K+ A+VTGA +GIG  +  +L  +G    +   ++        ++  +G  + +  ++DV
Sbjct: 2  KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDV 60
Query: 66 ADPAAIHSVADFIRSHFGKLDILVNNAGI 94
          +D   + +  +  R   G  D++VNNAG+
Sbjct: 61 SDRDQVFAAVEQARKTLGGFDVIVNNAGV 89

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 43/217 (19%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA +GIG E+  +L   G   ++  A   +   E V  +K +G D         
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK---- 85
Query: 66  ADPAAIHSVADFIRSH------FGKLDILVNNAGITGISSDAD----------TLSGFIE 109
              A +  V D +R        FGKLDI+ +N+G+       D          T++   +
Sbjct: 86  ---ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQ 142
Query: 110 EGVAR---------------GKMTQTYESAEKCLQTNYLGAKRMCE--ALIPLLQLSDSA 152
             VAR               G +T   ++  K     Y G+K   E  A    + ++D  
Sbjct: 143 FFVAREAYKHLEIGGRLILMGSITGQAKAVPK--HAVYSGSKGAIETFARCMAIDMADKK 200
Query: 153 RIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDE 189
             VNV +  G    + H   +    + ENL+ E VDE
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE 237

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 10  VVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
           +VTGA+KGIG E+   L+  G   VLTAR E+G  + V +    G  +  +    + D  
Sbjct: 13  IVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTMEDMT 72
Query: 70  AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ 129
                        G LD+L+ N  IT  S     LS F ++            S  + ++
Sbjct: 73  FAEQFIVKAGKLMGGLDMLILNH-ITQTS-----LSLFHDD----------IHSVRRVME 116
Query: 130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
            N+L    M  A +P+L+ S+ + I  +SS  GK+ Y
Sbjct: 117 VNFLSYVVMSTAALPMLKQSNGS-IAVISSLAGKVTY 152

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 86/217 (39%), Gaps = 43/217 (19%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA +GIG E+  +L   G   ++  A   +   E V  +K +G D         
Sbjct: 30  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVK---- 85
Query: 66  ADPAAIHSVADFIRSH------FGKLDILVNNAGITGISSDAD----------TLSGFIE 109
              A +  V D +R        FGKLDI+ +N+G+       D          T++   +
Sbjct: 86  ---ANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQ 142
Query: 110 EGVAR---------------GKMTQTYESAEKCLQTNYLGAKRMCE--ALIPLLQLSDSA 152
             VAR               G +T   ++  K     Y G+K   E  A    + ++D  
Sbjct: 143 FFVAREAYKHLEIGGRLILMGSITGQAKAVPK--HAVYSGSKGAIETFARCMAIDMADKK 200
Query: 153 RIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDE 189
             VNV +  G    + H   +    + ENL+ E VDE
Sbjct: 201 ITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDE 237

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 2   AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH 61
           ++T K+ A+VTGA  G+G  V   LA  G    L  R     L+A+++      D+ +  
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR----LDALQETAAEIGDDALCV 79
Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAG 93
             DV DP ++ ++       FG++D+L NNAG
Sbjct: 80  PTDVTDPDSVRALFTATVEKFGRVDVLFNNAG 111

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 78  IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA-EKCLQTNYLGAK 136
           + +  G+LDI+VNNAG+                 ++RG++T+T ++     L  N     
Sbjct: 88  VAAGLGRLDIVVNNAGV-----------------ISRGRITETTDADWSLSLGVNVEAPF 130
Query: 137 RMCEALIPLLQLSDSARIVNVSSSLG 162
           R+C A IPL   +    IVNV+S  G
Sbjct: 131 RICRAAIPLXAAAGGGAIVNVASCWG 156

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 205 TKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYVKTEMT 251
           T G P    AY  +K A+   TR LAK++    I  N +CPGYV+TE T
Sbjct: 134 TAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFT 182

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 77/191 (40%), Gaps = 39/191 (20%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL------------EAVE 48
           MA+   + A++TG  +G+G      LA  G    +  R E   +            E V 
Sbjct: 5   MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA 64
Query: 49  KLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFI 108
            ++ +G    I  ++DV D AA+ S         G +DI + NAGI+ I+          
Sbjct: 65  LVEKTG-RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIA---------- 113
Query: 109 EEGVARGKMTQTYESAE--KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG---- 162
                   +    ESA+  + + TN  G      A+ P +   +  RIV VSS LG    
Sbjct: 114 --------LLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN 165
Query: 163 --KLMYVTHEW 171
             +  YV+ +W
Sbjct: 166 FAQASYVSSKW 176

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA+ GIG+ +    A  G   V    +++     +   K +G  N   +  DV 
Sbjct: 35  KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGI-NAHGYVCDVT 93
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGI 94
           D   I ++   I S  G +DILVNNAGI
Sbjct: 94  DEDGIQAMVAQIESEVGIIDILVNNAGI 121

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TGA KGIG ++ R  A  G   VL+ RD      A   L      +V    +D+A
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA 80
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT 103
           +P A   +A      FG LD+LVNNAGI+      DT
Sbjct: 81  EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT 117

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 98/243 (40%), Gaps = 38/243 (15%)
Query: 7   RYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTG+ +GIG  V   L  L   + V  A   K   + V ++K  G D +   + D+
Sbjct: 19  KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI-KADI 77
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDAD----------TLSGFIEEGVAR- 114
                I  + D   +HFG LDI V+N+G+       D          +L+   +  VAR 
Sbjct: 78  RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVARE 137
Query: 115 --------GKMTQTYESAEKCL----QTNYLGAKRMCEALIPLL--QLSDSARIVNVSSS 160
                   G++  T  +  K       + Y G+K   ++ + +      D    VN  + 
Sbjct: 138 AYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAP 197
Query: 161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSP-ETKGWP---ANAAAYI 216
            G +  + HE +     +  + T E+  ++ +         SP    GWP   AN   ++
Sbjct: 198 GGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAH-------ASPLHRNGWPQDVANVVGFL 250
Query: 217 LSK 219
           +SK
Sbjct: 251 VSK 253

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + A++TG   GIG  +  +    G   ++T R    G +A + +     D + F Q D +
Sbjct: 7  KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSS 64
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGI 94
          D      + D     FG +  LVNNAGI
Sbjct: 65 DEDGWTKLFDATEKAFGPVSTLVNNAGI 92

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 92/259 (35%), Gaps = 59/259 (22%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M   + +  ++TG++ GIG       A  G    +T R  +   E  + +  SG      
Sbjct: 1   MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQV 60
Query: 61  HQL--DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
           + +  DV        + +     FGK+D+LVNNAG       A     F   G  +G   
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAG-------AAIPDAFGTTGTDQG--- 110
Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
              +   K L+ N      M + + P L ++    IVNVSS +                 
Sbjct: 111 --IDIYHKTLKLNLQAVIEMTKKVKPHL-VASKGEIVNVSSIV----------------- 150
Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                   P+ +    +   Y ++KAA++ YTR  A     F I
Sbjct: 151 ----------------------AGPQAQ---PDFLYYAIAKAALDQYTRSTAIDLAKFGI 185
Query: 239 --NCVCPGYVKTEMTYNAG 255
             N V PG V+T  T   G
Sbjct: 186 RVNSVSPGMVETGFTNAMG 204

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIF 60
           E  K  A++TGA++GIG  +   LA +G   VL AR ++   +  +++  S       I 
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIV 63
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             LD+ D     +    I   +G +DILVN A            + F +     G +++ 
Sbjct: 64  LPLDITDCTKADTEIKDIHQKYGAVDILVNAA------------AXFXD-----GSLSEP 106
Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK 163
            ++  K  + N +    + + +  + ++  +  I NV+S   K
Sbjct: 107 VDNFRKIXEINVIAQYGILKTVTEIXKVQKNGYIFNVASRAAK 149

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + A+VTG   G+G EVV+ L   G     +  +E  G +   +L     +  +F + DV+
Sbjct: 7  KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVS 62
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGI 94
            A    V   ++   G L++LVNNAGI
Sbjct: 63 SEADWTLVMAAVQRRLGTLNVLVNNAGI 90

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/247 (21%), Positives = 98/247 (39%), Gaps = 61/247 (24%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + ++VTG+ +GIG  +  +LA  G   ++T    +      E++ +         ++++ 
Sbjct: 8   KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLL 67
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
              +I+   + I +    +DILVNNAGIT      D L            +  +    E+
Sbjct: 68  SEESINKAFEEIYNLVDGIDILVNNAGIT-----RDKLF-----------LRMSLLDWEE 111
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+ N  G   + +  +  +      RIVN+SS +G             F+         
Sbjct: 112 VLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVG-------------FTG-------N 151
Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
           V +V                        Y  +KA +  +T+ LAK+    N  +N V PG
Sbjct: 152 VGQV-----------------------NYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPG 188
Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 189 FIETDMT 195

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 27/159 (16%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA  G+G E  +  A  G   V+   D K   + V+++K +G +     Q DVA
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAGGE-AWPDQHDVA 379
Query: 67  --DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT-QTYES 123
               A I +V D     +G +DILVNNAGI    S A              KM+ Q ++S
Sbjct: 380 KDSEAIIKNVID----KYGTIDILVNNAGILRDRSFA--------------KMSKQEWDS 421
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
            +   Q + +G   +     P        RI+N++S+ G
Sbjct: 422 VQ---QVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA+KGIG E+   L+  G   VLTAR E+G  + V +    G  +  +    + 
Sbjct: 19  KKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAGTME 78
Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D               G LD+L+ N  IT  S     LS F ++            S  +
Sbjct: 79  DMTFAEQFIVKAGKLMGGLDMLILNH-ITQTS-----LSLFHDD----------IHSVRR 122
Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            ++ N+L    M  A +P+L+ S+ + I  +SS  GK+
Sbjct: 123 VMEVNFLSYVVMSTAALPMLKQSNGS-IAVISSLAGKM 159

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 71/254 (27%)
Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   + +++TGA+ GIG  + R L   G   +++  +E    E ++ L ++  DN   
Sbjct: 9   MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE----EKLKSLGNALKDN--- 61
Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           + ++V + A     ++ I S    LDILV NAGIT     +DTL+  +++        Q 
Sbjct: 62  YTIEVCNLANKEECSNLI-SKTSNLDILVCNAGIT-----SDTLAIRMKD--------QD 107
Query: 121 YESA-EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
           ++   +  L+ N++  +   EA+  ++Q     RI+N+SS +G                 
Sbjct: 108 FDKVIDINLKANFILNR---EAIKKMIQ-KRYGRIINISSIVG----------------- 146
Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN--FC 237
                                      G P   A Y  SKA +   T+ L+ +       
Sbjct: 147 -------------------------IAGNPGQ-ANYCASKAGLIGMTKSLSYEVATRGIT 180
Query: 238 INCVCPGYVKTEMT 251
           +N V PG++K++MT
Sbjct: 181 VNAVAPGFIKSDMT 194

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 20/154 (12%)
Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           +R  +VTG   GIG       A NG   V+   +E   +    ++    F      ++DV
Sbjct: 27  QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFG----VRVDV 82
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +      S  +   + +G++D+LVNNAG                 G     +T   E+ +
Sbjct: 83  SSAKDAESXVEKTTAKWGRVDVLVNNAGF----------------GTTGNVVTIPEETWD 126
Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
           +    N  G     + +IP+ + +    I+N +S
Sbjct: 127 RIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTS 160

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 102/255 (40%), Gaps = 77/255 (30%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  + ++LA +G ++ +     ++   E V +++ +G           
Sbjct: 8   KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIG---- 63
Query: 66  ADPAAIHSVADFI---------RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
           A+  ++H V             R+   K DIL+NNAGI            FIEE      
Sbjct: 64  ANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP--------GAFIEE------ 109
Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
              T +  ++ +  N      + +    L +L D++RI+N+SS+  ++            
Sbjct: 110 --TTEQFFDRXVSVNAKAPFFIIQQ--ALSRLRDNSRIINISSAATRIS----------- 154
Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P 234
                             L D+               AY  +K A+N  T  LAK+    
Sbjct: 155 ------------------LPDF--------------IAYSXTKGAINTXTFTLAKQLGAR 182
Query: 235 NFCINCVCPGYVKTE 249
              +N + PG+VKT+
Sbjct: 183 GITVNAILPGFVKTD 197

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 21/161 (13%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           R  +VTGA+KGIG  + RQLA +G  I V   RD  G  E +  +  +G +  +    DV
Sbjct: 27  RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLL-SFDV 85
Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDA--DTLSGFIEEGVARGKMTQTYES 123
           A+      V +   +  G    +V+NA   GI+ DA    LS    + V    +   Y  
Sbjct: 86  ANREQCREVLEHEIAQHGAWYGVVSNA---GIARDAAFPALSNDDWDAVIHTNLDSFYNV 142
Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL 164
            + C              ++P++      RI+ +SS  G +
Sbjct: 143 IQPC--------------IMPMIGARQGGRIITLSSVSGVM 169

>pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALN---GIITVLTARDEK--GGLEAVEKLKHSGFDNVI 59
           A+   ++TG + GIG  +  +LA +         T RD K  G L    +       ++ 
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE 60
Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             QLDV D  ++ +  +  R   G++D+LV NAG+ G+    + L    E+ VA      
Sbjct: 61  TLQLDVRDSKSVAAARE--RVTEGRVDVLVCNAGL-GLLGPLEALG---EDAVA------ 108
Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM 165
                   L+ N +G  RM +A +P ++   S R++ V+ S+G LM
Sbjct: 109 ------SVLEVNVVGTVRMLQAFLPDMKRRGSGRVL-VTGSVGGLM 147

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTGA+ GIG E     A  G   +L  R+E+      + +         +  LD+ 
Sbjct: 16  RIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRRVAQHIADEQHVQPQWFTLDLL 75
Query: 67  DPAA--IHSVADFIRSHFGKLDILVNNAGITG 96
              A     VAD I +H+ +LD +++NAG+ G
Sbjct: 76  TCTAEECRQVADRIAAHYPRLDGVLHNAGLLG 107

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          + A++TG   GIG  +  +    G   ++T R    G +A + +     D + F Q D +
Sbjct: 7  KVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTP--DQIQFFQHDSS 64
Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGI 94
          D      + D     FG +  LVNNAGI
Sbjct: 65 DEDGWTKLFDATEKAFGPVSTLVNNAGI 92

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQL 63
           A + A VTG ++GIG  + ++LAL G    LT  +     +AV  +++ +G   V   + 
Sbjct: 30  AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RA 88
Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGI 94
           D  D  AI           G LDILVN+AGI
Sbjct: 89  DNRDAEAIEQAIRETVEALGGLDILVNSAGI 119

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	290
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	1e-122
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-112
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	2e-61
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-52
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-42
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	1e-37
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	7e-37
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-36
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-36
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	3e-36
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	3e-36
1spx_A	278	Short-chain reductase family member (5L265); paral	4e-36
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	4e-36
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	5e-36
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-36
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	6e-36
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-35
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-35
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-35
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-35
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-35
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-35
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-35
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-35
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	5e-35
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	5e-35
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-35
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	9e-35
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	9e-35
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	1e-34
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-34
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-34
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	4e-34
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-34
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-34
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	6e-34
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-33
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	1e-33
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-33
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-33
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-33
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-33
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-33
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-33
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-33
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-33
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-33
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	3e-33
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-33
4dqx_A	277	Probable oxidoreductase protein; structural genomi	6e-33
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-33
4e4y_A	244	Short chain dehydrogenase family protein; structur	6e-33
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	8e-33
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-32
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-32
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-32
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-32
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-32
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-32
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-32
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-32
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-32
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	3e-32
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-32
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	5e-32
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-32
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	6e-32
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	6e-32
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	7e-32
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-32
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	9e-32
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-32
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-31
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-31
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-31
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-31
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-31
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-31
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-31
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	3e-31
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	3e-31
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-31
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	4e-31
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	6e-31
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-31
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	9e-31
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-30
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-30
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-30
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-30
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-30
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-30
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-30
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	7e-30
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	9e-30
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	9e-30
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-29
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-29
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-29
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-29
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-29
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-29
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	3e-29
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-29
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-29
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	3e-29
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	4e-29
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	4e-29
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	7e-29
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	1e-28
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-28
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-28
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-28
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-28
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-28
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-28
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-28
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	5e-28
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	5e-28
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	6e-28
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	6e-28
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	7e-28
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-28
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-28
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	8e-28
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	9e-28
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	9e-28
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	9e-28
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-27
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-27
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	2e-27
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-27
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	3e-27
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	3e-27
3cxt_A	291	Dehydrogenase with different specificities; rossma	4e-27
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-27
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	6e-27
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-26
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	1e-26
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-26
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-26
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-26
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-26
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	3e-26
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-26
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	5e-26
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-26
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	5e-26
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-26
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	9e-26
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-25
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-25
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-25
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-25
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-25
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	4e-25
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	8e-25
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-24
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-24
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-24
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-24
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	2e-23
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-23
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-23
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	4e-23
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-22
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	1e-22
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	4e-22
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-21
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	3e-21
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	3e-21
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-20
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-19
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-18
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-18
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	5e-17
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-16
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	5e-16
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	9e-14
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-13
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	9e-11
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-10
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	6e-10
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-07
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	3e-06
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	6e-06
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	8e-06
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	8e-06
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	9e-06
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	9e-06
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	1e-05
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-05
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-05
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	2e-05
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	4e-04
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	4e-04

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  352 bits (904), Expect = e-122
 Identities = 168/311 (54%), Positives = 204/311 (65%), Gaps = 21/311 (6%)

Query: 1   MAETA------KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG 54
           M ET       +R AVVTG NKGIG+E+ +QL+ NGI+ VLT RD   G EAVEKLK+S 
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60

Query: 55  FDNVIFHQLDVADPAA-IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVA 113
            +NV+FHQLDV DP A + S+ADFI++HFGKLDILVNNAG+ G S DAD     I +   
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGE 120

Query: 114 RGK--------------MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS 159
             +              M++TYE AE+CL+ NY G K + E LIPLLQLSDS RIVNVSS
Sbjct: 121 DSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSS 180

Query: 160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSK 219
           S G L YV++E A  +  D + LTEER+D V++  L D+KE   ET GWP+  AAY  SK
Sbjct: 181 STGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSK 240

Query: 220 AAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           A +NAYTR+LA K P F +NCVCPG VKTEM Y  G  T EEGAE  V +AL    GPSG
Sbjct: 241 ACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSG 300

Query: 280 LFFSRKEETLF 290
            F+   E + F
Sbjct: 301 FFYDCSELSAF 311

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  323 bits (831), Expect = e-112
 Identities = 102/293 (34%), Positives = 155/293 (52%), Gaps = 30/293 (10%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           +    A+VTG NKGIG  +VR L  L     VLTARD   G  AV++L+  G  +  FHQ
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQ 60

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
           LD+ D  +I ++ DF+R  +G LD+LVNNAGI    +D                 T  + 
Sbjct: 61  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADP----------------TPFHI 104

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
            AE  ++TN+ G + +C  L+PL++     R+VNVSS +      +          +E +
Sbjct: 105 QAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 162

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP------NF 236
           TEE +  ++++++ D K+G  + +GWP  ++AY ++K  +   +RI A+K          
Sbjct: 163 TEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKI 220

Query: 237 CINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKG--GPSGLFFSRKEE 287
            +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K  
Sbjct: 221 LLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 273

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  194 bits (494), Expect = 2e-61
 Identities = 65/302 (21%), Positives = 103/302 (34%), Gaps = 72/302 (23%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIIT--VLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           +    VVTGAN+GIG  +V+QL  +  I   + TARD +   E  + +K S    V    
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDS---RVHVLP 57

Query: 63  LDVADPAAIHSVADFIRSHFG--KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           L V    ++ +    +    G   L +L+NNAG+                          
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEP---------------N 102

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLS-----------DSARIVNVSSSLGKLMYVTH 169
                + L  N      + + L+PLL+ +             A ++ +SS LG +     
Sbjct: 103 RAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI----- 157

Query: 170 EWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL 229
                                              +        AY +SKAA+N + R L
Sbjct: 158 -------------------------------TDNTSGSAQFPVLAYRMSKAAINMFGRTL 186

Query: 230 AKKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE 287
           A      N  +   CPG+V+T +      LTVE+     +          +G FF R  +
Sbjct: 187 AVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNLK 246

Query: 288 TL 289
             
Sbjct: 247 PY 248

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  170 bits (433), Expect = 5e-52
 Identities = 61/299 (20%), Positives = 101/299 (33%), Gaps = 75/299 (25%)

Query: 9   AVVTGANKGIGYEVVRQLAL---NGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
            ++TG N+G+G  +V+ L            T R+ +   E  +  K+    N+   ++D+
Sbjct: 24  ILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHS--NIHILEIDL 81

Query: 66  ADPAAIHSVADFIRSHFG--KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
            +  A   +   I        L++L NNAGI   S+    +                 + 
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAV---------------RSQE 126

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLS-----------DSARIVNVSSSLGKLMYVTHEWA 172
               LQTN +    + +A +PLL+ +             A I+N+SS LG          
Sbjct: 127 LLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG---------- 176

Query: 173 KGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK 232
               S   N                                AY  SK+A+NA T+ L+  
Sbjct: 177 ----SIQGNT--------------------------DGGMYAYRTSKSALNAATKSLSVD 206

Query: 233 YP--NFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL 289
                     + PG+VKT+M  ++  L V       V          +G F +     L
Sbjct: 207 LYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 265

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  144 bits (367), Expect = 2e-42
 Identities = 62/276 (22%), Positives = 94/276 (34%), Gaps = 70/276 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLD 64
           R  +VTGA +GIG    R  A +G   VL  R E    E  +++K +G     +I   L+
Sbjct: 15  RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLE 74

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
            A       +A  +   FG+LD L++NA I G  +                      E  
Sbjct: 75  NATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPL---------------EQLPDEDF 119

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            + +  N      +  AL+PLL+ S+ A I   SSS+G                      
Sbjct: 120 MQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVG---------------------- 157

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PNFCINCV 241
                         ++G      W     AY +SK A     + LA +         N +
Sbjct: 158 --------------RKGRA---NW----GAYGVSKFATEGLMQTLADELEGVTAVRANSI 196

Query: 242 CPGYVKTEMTYNA-------GRLTVEEGAESPVWLA 270
            PG  +T M   A            E+     ++L 
Sbjct: 197 NPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYLM 232

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  143 bits (363), Expect = 1e-41
 Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 68/274 (24%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDN--VIFHQLD 64
           R  +VTGA+ GIG E     A  G   +L  R+E+   +    +              L 
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 72

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
                    +A  I  ++ +LD +++NAG+ G           + E        Q  +  
Sbjct: 73  TCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVC-------PMSE--------QNPQVW 117

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  +Q N      + +AL+PLL  SD+  +V  SSS+G                      
Sbjct: 118 QDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVG---------------------- 155

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCP 243
                         ++G      W     AY  SK A     ++LA +Y     +NC+ P
Sbjct: 156 --------------RQGRA---NW----GAYAASKFATEGMMQVLADEYQQRLRVNCINP 194

Query: 244 GYVKTEMTYNA------GRL-TVEEGAESPVWLA 270
           G  +T M  +A       +L T  +     +WL 
Sbjct: 195 GGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLM 228

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  133 bits (337), Expect = 1e-37
 Identities = 54/262 (20%), Positives = 82/262 (31%), Gaps = 64/262 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA+KGIG E+   LA  G   V+TAR ++   + V      G  +  +    + D 
Sbjct: 31  VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM 90

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                         G LD+L+ N             S  +                 K +
Sbjct: 91  TFAEQFVAQAGKLMGGLDMLILNHIT--------NTSLNLFHD--------DIHHVRKSM 134

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N+L    +  A +P+L+ S +  IV VSS  GK+                        
Sbjct: 135 EVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV------------------------ 169

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL----AKKYPNFCINCVCPG 244
                         P         AAY  SK A++ +   +    +    N  I     G
Sbjct: 170 ------------AYP-------MVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLG 210

Query: 245 YVKTEMTYNAGRLTVEEGAESP 266
            + TE    A    V   A   
Sbjct: 211 LIDTETAMKAVSGIVHMQAAPK 232

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  131 bits (332), Expect = 7e-37
 Identities = 58/248 (23%), Positives = 92/248 (37%), Gaps = 67/248 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG +KGIGY +V +LA  G      +R+EK   E +E  +  G + V     D+   
Sbjct: 24  ALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLN-VEGSVCDLLSR 82

Query: 69  AAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE-- 125
                +   +   F GKL+ILVNNAG+                     K  + +   +  
Sbjct: 83  TERDKLMQTVAHVFDGKLNILVNNAGVV------------------IHKEAKDFTEKDYN 124

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN+  A  + +   PLL+ S +  ++ +SS  G                       
Sbjct: 125 IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS--------------------- 163

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                  P + + Y  SK A+N  T+ LA ++    I  N V P
Sbjct: 164 ---------------------ALP-SVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201

Query: 244 GYVKTEMT 251
           G + T + 
Sbjct: 202 GVILTPLV 209

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  130 bits (330), Expect = 1e-36
 Identities = 49/248 (19%), Positives = 74/248 (29%), Gaps = 62/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDV 65
             AVVTG + GIG   V  L   G      ARD +    A   L+       +     DV
Sbjct: 9   AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDV 68

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D   + + A+      G   ILVNNAG         +                T E+  
Sbjct: 69  LDALQVRAFAEACERTLGCASILVNNAGQG-----RVSTF-----------AETTDEAWS 112

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + LQ  +        A +P L+    A IV V+S L                        
Sbjct: 113 EELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQ--------------------- 151

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                            P       +  A   ++A +    R +A ++    +  N +  
Sbjct: 152 ---------------PEP-------HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILI 189

Query: 244 GYVKTEMT 251
           G V++   
Sbjct: 190 GLVESGQW 197

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  130 bits (329), Expect = 1e-36
 Identities = 55/248 (22%), Positives = 84/248 (33%), Gaps = 67/248 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG  KGIG+ +V + A  G +    AR+E    E + K +  GF  V     D +  
Sbjct: 17  VLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQ-VTGSVCDASLR 75

Query: 69  AAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE-- 125
                +   + S FG KLDIL+NN G                    R K T  Y + +  
Sbjct: 76  PEREKLMQTVSSMFGGKLDILINNLGAI------------------RSKPTLDYTAEDFS 117

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN   A  + +   PLL+ S    I+ +SS                          
Sbjct: 118 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSS-------------------------- 151

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
               +                   +  + Y  +K A+N   R LA ++       N V P
Sbjct: 152 ----IAGVVSA-------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 194

Query: 244 GYVKTEMT 251
             + T + 
Sbjct: 195 AVIATPLA 202

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  129 bits (327), Expect = 3e-36
 Identities = 60/253 (23%), Positives = 82/253 (32%), Gaps = 60/253 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   R  VVTG  KGIG  +    A  G    +  R        V  L   G   VI 
Sbjct: 5   MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIG 64

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q DV+D A   ++A      FG +D++  NAG+       D               T T
Sbjct: 65  VQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVF-----PDAPL-----------ATMT 108

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E        N  G     +A +  L  S S R+V  SS  G +                
Sbjct: 109 PEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT--------------- 153

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                               G P   GW ++  A   +KAA   + R  A +       +
Sbjct: 154 --------------------GYP---GW-SHYGA---TKAAQLGFMRTAAIELAPHKITV 186

Query: 239 NCVCPGYVKTEMT 251
           N + PG + TE  
Sbjct: 187 NAIMPGNIMTEGL 199

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  129 bits (326), Expect = 3e-36
 Identities = 55/245 (22%), Positives = 85/245 (34%), Gaps = 61/245 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG++ GIG  +    A  G   VL AR      EA   LK      V+   +DVA P
Sbjct: 10  AVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATP 69

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +V + +RS FG  DILVNNAG                       M    E  +   
Sbjct: 70  EGVDAVVESVRSSFGGADILVNNAGTGS----------------NETIMEAADEKWQFYW 113

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           +   + A R+   L+P ++      I++ +S                             
Sbjct: 114 ELLVMAAVRLARGLVPGMRARGGGAIIHNASICA-------------------------- 147

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                      +              Y ++KAA+  +++ LA +     I  NC+ PG +
Sbjct: 148 ----------VQPLW-------YEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLI 190

Query: 247 KTEMT 251
            T   
Sbjct: 191 LTPDW 195

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  129 bits (327), Expect = 4e-36
 Identities = 65/275 (23%), Positives = 95/275 (34%), Gaps = 60/275 (21%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVA 66
           A++TG++ GIG       A  G    +T R  +   E  +++  +G    NV     DV 
Sbjct: 9   AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVT 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             A    +       FGKLDILVNNAG     S + T               Q+ ES + 
Sbjct: 69  TDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTG------------TAQSIESYDA 116

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L  N      + +  +P L  S    IVN+SS    L                      
Sbjct: 117 TLNLNLRSVIALTKKAVPHLS-STKGEIVNISSIASGLH--------------------- 154

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                 P +   Y ++KAA++ YTR  A       I  N + PG
Sbjct: 155 --------------------ATP-DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPG 193

Query: 245 YVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
            V T      G +  E   +    +A + +  P+G
Sbjct: 194 LVATGFGSAMG-MPEETSKKFYSTMATMKECVPAG 227

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  128 bits (325), Expect = 4e-36
 Identities = 59/279 (21%), Positives = 96/279 (34%), Gaps = 68/279 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M+  + + AVVTGA++GIG  + R+L   G   VLTARD +       ++  +G      
Sbjct: 24  MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-GEAES 82

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           H  D++   AI + A  + +  G+ D+LVNNAG+                       T  
Sbjct: 83  HACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWF----GGPL-----------HTMK 127

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
               +  +  N      +  A  P +  +    I+N+SS  G                  
Sbjct: 128 PAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG------------------ 169

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                         + AAY  SK  +N      A++       +
Sbjct: 170 ------------------------KNPVA-DGAAYTASKWGLNGLMTSAAEELRQHQVRV 204

Query: 239 NCVCPGYVKTEMTYN-------AGRLTVEEGAESPVWLA 270
           + V PG V+TE            G +  ++ A+    LA
Sbjct: 205 SLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVALLA 243

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  128 bits (325), Expect = 5e-36
 Identities = 65/281 (23%), Positives = 99/281 (35%), Gaps = 76/281 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG  + IG   V  LA  G   ++   DE    +AVE L+  G D V    +DV + 
Sbjct: 16  AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHD-VSSVVMDVTNT 74

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            ++ +    +    G++DILV  AGI      A+ +               T     K +
Sbjct: 75  ESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDM---------------TDGQWLKQV 119

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G  R C+A+  ++       IV + S                             
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQKQGVIVAIGS----------------------------- 150

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
            +    +N            P   AAY  SKA ++ Y R LA ++    I  N V P Y+
Sbjct: 151 -MSGLIVN-----------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYI 198

Query: 247 KTEMTYN----------------AGRL-TVEEGAESPVWLA 270
           +T +T                   GR+   +E A    +LA
Sbjct: 199 ETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLA 239

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  128 bits (324), Expect = 5e-36
 Identities = 64/281 (22%), Positives = 98/281 (34%), Gaps = 75/281 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA+ G G  +  +    G          +   E      H+  D V+  + DVAD 
Sbjct: 5   AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADE 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +++        FG +D+LVNNAGITG S                   T   E  +K +
Sbjct: 65  GDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVL-------------HTTPVEQFDKVM 111

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G    C A++P + L  +  IVN++S                             
Sbjct: 112 AVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVAS-------------------------- 145

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                              +P   +AY  SK A+   T+ +A  Y    I  N VCPG +
Sbjct: 146 ----------------LVAFP-GRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMI 188

Query: 247 KTEMTYNA----------------GRL-TVEEGAESPVWLA 270
           +T MT                     + T  + A++ ++LA
Sbjct: 189 ETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLA 229

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  128 bits (325), Expect = 6e-36
 Identities = 46/260 (17%), Positives = 83/260 (31%), Gaps = 67/260 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AV+TGA  GIG    ++    G    +T R +     A+ ++   G    +  Q D A
Sbjct: 30  KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G-GGAVGIQADSA 85

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           + A +  + + +++  G++D+L  NAG   +    +                 T E  + 
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEV----------------TEEQYDD 129

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N  G     +  +PLL     + +V   S+ G                        
Sbjct: 130 TFDRNVKGVLFTVQKALPLLA--RGSSVVLTGSTAG------------------------ 163

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                             + G P   + Y  SKAA+ ++ R       +  I  N + PG
Sbjct: 164 ------------------STGTP-AFSVYAASKAALRSFARNWILDLKDRGIRINTLSPG 204

Query: 245 YVKTEMTYNAGRLTVEEGAE 264
             +T            +   
Sbjct: 205 PTETTGLVELAGKDPVQQQG 224

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  127 bits (323), Expect = 1e-35
 Identities = 51/245 (20%), Positives = 84/245 (34%), Gaps = 61/245 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VT +  GIG  + R+LA +G   V+++R ++     V  L+  G   V      V   
Sbjct: 17  ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLS-VTGTVCHVGKA 75

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                +     +  G +DILV+NA +         +            +  T E  +K L
Sbjct: 76  EDRERLVAMAVNLHGGVDILVSNAAVNP---FFGNI------------IDATEEVWDKIL 120

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N      M +A++P ++      ++ VSS                             
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYH------------------------ 156

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                         P       N   Y +SK A+   T+ LA +     I  NC+ PG +
Sbjct: 157 ------------PFP-------NLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLI 197

Query: 247 KTEMT 251
           KT  +
Sbjct: 198 KTNFS 202

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  128 bits (324), Expect = 1e-35
 Identities = 42/285 (14%), Positives = 85/285 (29%), Gaps = 79/285 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLD 64
           R  +VTG   GIG  V   L   G   ++  R+      AV++L+  G +   + +   D
Sbjct: 12  RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTD 71

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           + +        D + +  G+L  +V+ AG +                          E+ 
Sbjct: 72  ITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPI---------------TQVDSEAW 116

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            + +  N  G   + +     +        V +SS                         
Sbjct: 117 RRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA---------------------- 154

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                               +        AY ++K+A++   ++ A +     +  N + 
Sbjct: 155 --------------------SNTHR-WFGAYGVTKSAVDHLMQLAADELGASWVRVNSIR 193

Query: 243 PGYVKTEMTYN----------------AGRL-TVEEGAESPVWLA 270
           PG ++T++                     R   VE+ A   ++L 
Sbjct: 194 PGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLL 238

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  128 bits (323), Expect = 1e-35
 Identities = 55/266 (20%), Positives = 85/266 (31%), Gaps = 70/266 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TGA  GIG     + A      VL   ++ G  E   K K  G   V    +D ++ 
Sbjct: 34  VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNR 92

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             I+S A  +++  G + ILVNNAG+          +  +                EK  
Sbjct: 93  EDIYSSAKKVKAEIGDVSILVNNAGV--------VYTSDLFA--------TQDPQIEKTF 136

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N L      +A +P +  ++   IV V+S+ G +                        
Sbjct: 137 EVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV------------------------ 172

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL-----AKKYPNFCINCVCP 243
                         P          AY  SK A   + + L     A +       C+CP
Sbjct: 173 ------------SVP-------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP 213

Query: 244 GYVKTEMTYNAGR-----LTVEEGAE 264
            +V T    N        L  EE   
Sbjct: 214 NFVNTGFIKNPSTSLGPTLEPEEVVN 239

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  126 bits (320), Expect = 2e-35
 Identities = 58/280 (20%), Positives = 91/280 (32%), Gaps = 79/280 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA  GIG  +    A  G   V+T    +G       ++ +G    I  + +V D 
Sbjct: 15  AIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK-AIGLECNVTDE 73

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
               +V       FGK+ +LVNNAG  G                            E   
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGGG-----PKP------------FDMPMSDFEWAF 116

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N     R+ +   P +Q +    I+N+SS  G+                         
Sbjct: 117 KLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGEN------------------------ 152

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGYV 246
                        +          A+Y  SKAA+N  TR +A         +N + PG +
Sbjct: 153 ------------TNV-------RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAI 193

Query: 247 KTEMTYNA---------------GRL-TVEEGAESPVWLA 270
           KT+                    GRL   ++ A + ++L 
Sbjct: 194 KTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLC 233

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  126 bits (320), Expect = 3e-35
 Identities = 59/248 (23%), Positives = 95/248 (38%), Gaps = 67/248 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG ++GIGY +V +LA  G      +R++K   + + + +  GF  V     D++  
Sbjct: 12  ALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSR 70

Query: 69  AAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE-- 125
           +    + + + +HF GKL+ILVNNAGI                     K  + Y   +  
Sbjct: 71  SERQELMNTVANHFHGKLNILVNNAGIV------------------IYKEAKDYTVEDYS 112

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             +  N+  A  +     P L+ S+   +V +SS  G L                     
Sbjct: 113 LIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL--------------------- 151

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP 243
                            P         A Y  +K AM+  TR LA ++   N  +N V P
Sbjct: 152 ---------------AVP-------YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 189

Query: 244 GYVKTEMT 251
           G + T + 
Sbjct: 190 GVIATSLV 197

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  127 bits (321), Expect = 3e-35
 Identities = 56/288 (19%), Positives = 91/288 (31%), Gaps = 76/288 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 R A+VTG   G+G  + + L+  G   V+T R       A  ++     + V  
Sbjct: 28  KGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRA 87

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV DP  + ++   +R+ F +LD+LVNNAG        + ++               
Sbjct: 88  VVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVT--------------- 132

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLL--QLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
           +E     +  N  GA    +    ++  Q     RI+N  S                   
Sbjct: 133 FEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA---------------- 176

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                         P N+A Y  +K A+   T+  A       I
Sbjct: 177 --------------------------QTPRP-NSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 239 --NCVCPGYVKTEMTYN-------------AGRL-TVEEGAESPVWLA 270
               +  G   T+MT               A     +E  AE+ V++A
Sbjct: 210 ACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMA 257

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  127 bits (321), Expect = 3e-35
 Identities = 59/291 (20%), Positives = 92/291 (31%), Gaps = 79/291 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M+    + A+VTGA+ GIG       A  G   V+TAR+     E  +++   G +    
Sbjct: 3   MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE-AAA 61

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV D A   ++ +     FG LD   NNAG  G   +  +L               +
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSL---------------S 106

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E   + L TN   A    +  +P +       +   SS +G                  
Sbjct: 107 VEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA--------------- 151

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI 238
                                     G+    A Y  SKA +    + LA +       +
Sbjct: 152 --------------------------GFA-GVAPYAASKAGLIGLVQALAVELGARGIRV 184

Query: 239 NCVCPGYVKTEMTYNA------------------GRL-TVEEGAESPVWLA 270
           N + PG   T   +                     R+   EE AE+ ++LA
Sbjct: 185 NALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLA 235

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  126 bits (319), Expect = 4e-35
 Identities = 53/288 (18%), Positives = 88/288 (30%), Gaps = 80/288 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M++T K+ A+VTGA  G+G  V   LA  G    L  R      E   ++      + + 
Sbjct: 23  MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD----DALC 78

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV DP ++ ++       FG++D+L NNAG    +   + L+               
Sbjct: 79  VPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLT--------------- 123

Query: 121 YESAEKCLQTNYLGAKRMCEALIP--LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
           +   ++ + TN  G     +        Q     RI+N  S                   
Sbjct: 124 FAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA---------------- 167

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                     T   P  +A Y  +K A+   T+  +       I
Sbjct: 168 --------------------------TSPRP-YSAPYTATKHAITGLTKSTSLDGRVHDI 200

Query: 239 --NCVCPGYVKTEMTYN-------------AGRL-TVEEGAESPVWLA 270
               +  G   T M                   +  V   A + V++A
Sbjct: 201 ACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMA 248

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  127 bits (321), Expect = 4e-35
 Identities = 61/253 (24%), Positives = 88/253 (34%), Gaps = 60/253 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M + + R  +VTG  KGIG  +    A  G    + AR  +       +L   G  NVI 
Sbjct: 36  MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIG 95

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            +LDV+DP +    A  +   FG LD++  NAGI       +               T T
Sbjct: 96  VRLDVSDPGSCADAARTVVDAFGALDVVCANAGIF-----PEARL-----------DTMT 139

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E   + L  N  G     +A +  L  S   R++  SS  G +                
Sbjct: 140 PEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT--------------- 184

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                               G P   GW ++  A   SKAA   + R  A +       +
Sbjct: 185 --------------------GYP---GW-SHYGA---SKAAQLGFMRTAAIELAPRGVTV 217

Query: 239 NCVCPGYVKTEMT 251
           N + PG + TE  
Sbjct: 218 NAILPGNILTEGL 230

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  126 bits (319), Expect = 5e-35
 Identities = 61/275 (22%), Positives = 90/275 (32%), Gaps = 59/275 (21%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M       A++TGA  GIG      LA +G+      R      E  +++  +G    I 
Sbjct: 23  MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQ-AIA 81

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            + DV+D   + +    +   FG LDI+V NAGI G+ +                     
Sbjct: 82  LEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPI---------------DDLK 126

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
               ++ +  N  G        +P L+      IV VSS  G   +              
Sbjct: 127 PFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF-------------- 172

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                       P  A AY  +KAA  A  + LA +     I  
Sbjct: 173 --------------------------TTP-GATAYTATKAAQVAIVQQLALELGKHHIRV 205

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLH 273
           N VCPG ++T ++ N      EE A    W     
Sbjct: 206 NAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV 240

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  126 bits (318), Expect = 5e-35
 Identities = 61/283 (21%), Positives = 95/283 (33%), Gaps = 80/283 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA  GIG  + ++ ALN  I V     E    + V++L+  G + V+  + DV+  
Sbjct: 10  VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKE-VLGVKADVSKK 68

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +          + ++D+L NNAGI    +                    + E  E+ L
Sbjct: 69  KDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPV---------------AEVSDELWERVL 113

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N   A     A+IP++       IVN +S  G                          
Sbjct: 114 AVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAG-------------------------- 147

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                            +G     A Y ++K  +   TR +A  Y +  I    V PG V
Sbjct: 148 ----------------IRGGF-AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTV 190

Query: 247 KTEMTYNA------------------GRL-TVEEGAESPVWLA 270
           KT +   +                   RL   E+ A   V+LA
Sbjct: 191 KTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLA 233

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  126 bits (319), Expect = 6e-35
 Identities = 55/251 (21%), Positives = 82/251 (32%), Gaps = 59/251 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVA 66
            ++TG++ GIG       A  G    +T R  +   E  + +  SG     V     DV 
Sbjct: 9   VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVT 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
                  + +     FGK+D+LVNNAG     +                   Q  +   K
Sbjct: 69  TEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDA------------FGTTGTDQGIDIYHK 116

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+ N      M + + P L ++    IVNVSS +                         
Sbjct: 117 TLKLNLQAVIEMTKKVKPHL-VASKGEIVNVSSIVAGPQ--------------------- 154

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                                 P +   Y ++KAA++ YTR  A         +N V PG
Sbjct: 155 --------------------AQP-DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPG 193

Query: 245 YVKTEMTYNAG 255
            V+T  T   G
Sbjct: 194 MVETGFTNAMG 204

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  125 bits (316), Expect = 9e-35
 Identities = 52/271 (19%), Positives = 84/271 (30%), Gaps = 66/271 (24%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLA---LNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIF 60
                V+TGA++G G  +  QLA     G + +++AR E    +  E+L     D  V+ 
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 61  HQLDVADPAAIHSVAD----FIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
              D+   A +  +        R    +  +L+NNA   G     D   GF+        
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLG-----DVSKGFLNV------ 113

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS--DSARIVNVSSSLGKLMYVTHEWAKG 174
                         N      +    +   Q S   S  +VN+SS      Y        
Sbjct: 114 --NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY-------- 163

Query: 175 VFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP 234
                                          KGW      Y   KAA +   ++LA + P
Sbjct: 164 -------------------------------KGW----GLYCAGKAARDMLYQVLAAEEP 188

Query: 235 NFCINCVCPGYVKTEMTYNAGRLTVEEGAES 265
           +  +    PG +  +M   A   + +    S
Sbjct: 189 SVRVLSYAPGPLDNDMQQLARETSKDPELRS 219

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  125 bits (316), Expect = 9e-35
 Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 63/245 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TGA  GIG E+    A  G   V++  +       V++++  G       + D+   
Sbjct: 14  AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQ-AFACRCDITSE 72

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + ++ADF  S  GK+DILVNNAG  G                             +  
Sbjct: 73  QELSALADFAISKLGKVDILVNNAGGGG-----------------PKPFDMPMADFRRAY 115

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N      + + + P ++ +    I+ ++S   +                         
Sbjct: 116 ELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN------------------------ 151

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                        +        N  +Y  SKAA +   R +A      N  +N + PG +
Sbjct: 152 ------------KNI-------NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAI 192

Query: 247 KTEMT 251
            T+  
Sbjct: 193 LTDAL 197

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  125 bits (315), Expect = 1e-34
 Identities = 52/273 (19%), Positives = 88/273 (32%), Gaps = 66/273 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVL--TARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
            +VTG ++GIG  +V  L      TV+   AR E    +  EK      D   +   D+ 
Sbjct: 5   ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG----DRFFYVVGDIT 60

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           + + +  + +      GK+D LV NAG+         +                  + +K
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVLE---PVQNV------------NEIDVNAWKK 105

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N+     +    +P L+ + +  +V VSS    + +                    
Sbjct: 106 LYDINFFSIVSLVGIALPELKKT-NGNVVFVSSDACNMYF-------------------- 144

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV 246
                                  ++  AY  SKAA+N +   LA +        V PG V
Sbjct: 145 -----------------------SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIV 181

Query: 247 KTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
            T+M     R  V   + S   L +      + 
Sbjct: 182 DTDMQ-VNIRENVGPSSMSAEQLKMFRGLKENN 213

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  124 bits (314), Expect = 1e-34
 Identities = 38/270 (14%), Positives = 79/270 (29%), Gaps = 72/270 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA  G+G  +   L   G    +  R      + +++ +    + VI    D+A  
Sbjct: 6   IIVTGAGSGLGRALTIGLVERGHQVSMMGRRY----QRLQQQELLLGNAVIGIVADLAHH 61

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +           G  +++++ AG            G +           T E   + +
Sbjct: 62  EDVDVAFAAAVEWGGLPELVLHCAGT--------GEFGPVGVY--------TAEQIRRVM 105

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           ++N +    + +  + L+       + NV SS  +                         
Sbjct: 106 ESNLVSTILVAQQTVRLIG-ERGGVLANVLSSAAQ------------------------- 139

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                             G   N + Y  SK  M  +   L  +  +  +    + P  +
Sbjct: 140 -----------------VGKA-NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGI 181

Query: 247 KTEMTYNAGR------LTVEEGAESPVWLA 270
           ++E   N         +T E+ A   +   
Sbjct: 182 RSEFWDNTDHVDPSGFMTPEDAAAYMLDAL 211

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  124 bits (315), Expect = 2e-34
 Identities = 45/260 (17%), Positives = 87/260 (33%), Gaps = 62/260 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            V++G    +G  + R+ A  G   VL AR  +   +  +++  +G    +    D+ D 
Sbjct: 14  VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR-ALSVGTDITDD 72

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A +  + D     +G++D+++NNA                           T+E     +
Sbjct: 73  AQVAHLVDETMKAYGRVDVVINNAFRVPSMKPF---------------ANTTFEHMRDAI 117

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           +    GA R+ +   P L+ S    +VNV+S + +                         
Sbjct: 118 ELTVFGALRLIQGFTPALEES-KGAVVNVNSMVVRH------------------------ 152

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                                    AY ++K+A+ A ++ LA +       +N V PGY+
Sbjct: 153 ------------SQA-------KYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYI 193

Query: 247 KTEMTYNAGRLTVEEGAESP 266
                 +       +   S 
Sbjct: 194 WGGTLKSYFEHQAGKYGTSV 213

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  123 bits (312), Expect = 4e-34
 Identities = 54/245 (22%), Positives = 79/245 (32%), Gaps = 61/245 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA   IG     +LA  G    L   + +   +A   ++  G +    +  DV   
Sbjct: 10  CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVE-ARSYVCDVTSE 68

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A+    D +   FGK+D L NNAG  G  +                      +   + L
Sbjct: 69  EAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPV---------------QDYPSDDFARVL 113

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  GA  + +A+   +   +  RIVN +S  G                          
Sbjct: 114 TINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVK------------------------ 149

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                             G P N AAY  SK A+ A T   A      N  +N + PGY+
Sbjct: 150 ------------------GPP-NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYM 190

Query: 247 KTEMT 251
                
Sbjct: 191 GPGFM 195

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  123 bits (311), Expect = 4e-34
 Identities = 55/257 (21%), Positives = 85/257 (33%), Gaps = 67/257 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     + A+V G   G+G   VR+L   G   +LT R+E       E+    G   V  
Sbjct: 3   MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHA 58

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            + D+AD   I  +        G +D+L  NAG++            + E          
Sbjct: 59  LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVS-----ELEPFDQVSE---------- 103

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
             S ++    N  GA    + L PL++  +   IV  SS                     
Sbjct: 104 -ASYDRQFAVNTKGAFFTVQRLTPLIR--EGGSIVFTSSVAD------------------ 142

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                     G P   + Y  SKAA+ ++  +LA +       +
Sbjct: 143 ------------------------EGGHP-GMSVYSASKAALVSFASVLAAELLPRGIRV 177

Query: 239 NCVCPGYVKTEMTYNAG 255
           N V PG++ T     AG
Sbjct: 178 NSVSPGFIDTPTKGVAG 194

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  123 bits (310), Expect = 5e-34
 Identities = 52/273 (19%), Positives = 98/273 (35%), Gaps = 71/273 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVA 66
           A++TGA++GIG  +   LA +G   VL AR ++   +  +++  S       I   LD+ 
Sbjct: 10  AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDIT 69

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D     +    I   +G +DILVN A +         + G + E V         ++  K
Sbjct: 70  DCTKADTEIKDIHQKYGAVDILVNAAAM--------FMDGSLSEPV---------DNFRK 112

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++ N +    + + +  ++++  +  I NV+S   K  +                    
Sbjct: 113 IMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-------------------- 152

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                  A+   Y  +K A+      L ++     I    +CPG
Sbjct: 153 -----------------------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPG 189

Query: 245 YVKTEMTYNAGR-------LTVEEGAESPVWLA 270
           +V T+M   AG        +  ++   +   L 
Sbjct: 190 WVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCLL 222

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  122 bits (310), Expect = 6e-34
 Identities = 59/283 (20%), Positives = 90/283 (31%), Gaps = 82/283 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TG   GIG  +  +    G   ++T R    G +A + +       + F Q D +D 
Sbjct: 9   AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSSDE 66

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                + D     FG +  LVNNAGI    S  +T                T     K L
Sbjct: 67  DGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEET----------------TTAEWRKLL 110

Query: 129 QTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
             N  G        I  ++     A I+N+SS  G +                       
Sbjct: 111 AVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV----------------------- 147

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVCP 243
                              G P +  AY  SK A+   ++  A        +  +N V P
Sbjct: 148 -------------------GDP-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP 187

Query: 244 GYVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
           GY+KT +  +                G +    + A   V+LA
Sbjct: 188 GYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA 230

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  122 bits (309), Expect = 1e-33
 Identities = 57/282 (20%), Positives = 85/282 (30%), Gaps = 79/282 (28%)

Query: 9   AVVTGA-NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            +VT A   GIG    R+  L G   V++   E+   E  ++L   G   V     DV  
Sbjct: 25  VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS 84

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
             A+ ++        G+LD+LVNNAG+ G      T             +  T E  ++ 
Sbjct: 85  TEAVDALITQTVEKAGRLDVLVNNAGLGG-----QTPV-----------VDMTDEEWDRV 128

Query: 128 LQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
           L        R   A +     +     IVN +S LG                        
Sbjct: 129 LNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR---------------------- 166

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                                   + + Y  +KA + A TR  A +       IN V P 
Sbjct: 167 --------------------AQH-SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPS 205

Query: 245 YVKTEMTYN---------------AGRL-TVEEGAESPVWLA 270
             + +                    GR     E A +  +LA
Sbjct: 206 IARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLA 247

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  122 bits (308), Expect = 1e-33
 Identities = 60/274 (21%), Positives = 90/274 (32%), Gaps = 75/274 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+V+G  +G+G   VR +   G   V     ++ G     +L     D   +  LDV  P
Sbjct: 10  ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQP 65

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A   +  D   + FG L +LVNNAGI  I +  D                      ++ L
Sbjct: 66  AQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDY----------------ALTEWQRIL 109

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G      A++  ++ +    I+N+SS  G                          
Sbjct: 110 DVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLA------------------------ 145

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                       G+            Y  +K A+   T+  A +     I  N + PG V
Sbjct: 146 ------------GTV-------ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLV 186

Query: 247 KTEMTYNA---------GRL-TVEEGAESPVWLA 270
           KT MT            GR     E +   V+LA
Sbjct: 187 KTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLA 220

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  122 bits (308), Expect = 1e-33
 Identities = 56/282 (19%), Positives = 95/282 (33%), Gaps = 80/282 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTG+++G+G     +LA NG   V+  AR +K  LE  E+++  G   V+  + +V  
Sbjct: 7   ALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVK-VLVVKANVGQ 65

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           PA I  +   I   FG+LD+ VNNA                        M       +  
Sbjct: 66  PAKIKEMFQQIDETFGRLDVFVNNAASG-----VLRPV-----------MELEETHWDWT 109

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  N        +    L++ +    IV++SS                            
Sbjct: 110 MNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIR----------------------- 146

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
                                  N     +SKAA+ A TR LA +       +N V  G 
Sbjct: 147 -------------------YLE-NYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGA 186

Query: 246 VKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
           + T+   +                 GR+  +++  ++  +L 
Sbjct: 187 IDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLV 228

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  122 bits (308), Expect = 2e-33
 Identities = 61/259 (23%), Positives = 90/259 (34%), Gaps = 71/259 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG + GIG  VV  L   G   V  + DEK  +   +             ++DV + 
Sbjct: 17  AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD-----------HFKIDVTNE 65

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +    +     +G++DILVNNAGI   S    T                  E   + +
Sbjct: 66  EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLT----------------PTEIWRRII 109

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G+  M +  IP++       I+N++S                             
Sbjct: 110 DVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS-------------------------- 143

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYVK 247
                                 NAAAY+ SK A+   TR +A  Y P    N VCPG + 
Sbjct: 144 ----------------YAATK-NAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIM 186

Query: 248 TEMTYNAGRLTVEEGAESP 266
           T M   A ++ V E   + 
Sbjct: 187 TPMVIKAAKMEVGEDENAV 205

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  122 bits (308), Expect = 2e-33
 Identities = 45/244 (18%), Positives = 81/244 (33%), Gaps = 57/244 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A VTG++ GIG+ V    A  G    +         +A    K  G      ++ +++DP
Sbjct: 37  ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH-SKAYKCNISDP 95

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            ++          FG +D+ V NAG+T                         Y+S  K +
Sbjct: 96  KSVEETISQQEKDFGTIDVFVANAGVTWTQGPEI--------------DVDNYDSWNKII 141

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             +  G       +  + + +    ++  SS                             
Sbjct: 142 SVDLNGVYYCSHNIGKIFKKNGKGSLIITSS----------------------------- 172

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC-INCVCPGYVK 247
            +  + +N            P   A Y  +KAA     + LA ++  F  +N + PGY+ 
Sbjct: 173 -ISGKIVN-----------IPQLQAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYID 220

Query: 248 TEMT 251
           T++T
Sbjct: 221 TDIT 224

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  122 bits (309), Expect = 2e-33
 Identities = 53/251 (21%), Positives = 82/251 (32%), Gaps = 61/251 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVA 66
            ++TG++ GIG       A  G    +T R+E    E  +++  +G   + +     DV 
Sbjct: 29  VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVT 88

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           + +    + +   + FGK+DILVNNAG         T +             Q  E  +K
Sbjct: 89  EASGQDDIINTTLAKFGKIDILVNNAGANL---ADGTAN-----------TDQPVELYQK 134

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N+     M +     L +     IVNVSS +                         
Sbjct: 135 TFKLNFQAVIEMTQKTKEHL-IKTKGEIVNVSSIVAGPQ--------------------- 172

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                                       Y  +KAA++ YTR  A         +N V PG
Sbjct: 173 --------------AHS-------GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPG 211

Query: 245 YVKTEMTYNAG 255
            V T      G
Sbjct: 212 AVATGFMGAMG 222

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  121 bits (306), Expect = 2e-33
 Identities = 55/245 (22%), Positives = 84/245 (34%), Gaps = 62/245 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG+  GIG      LA  G   V+   + +      +++   G    I   +DV+DP
Sbjct: 12  GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-AISVAVDVSDP 70

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            +  ++AD   + FG +D LVNNA I G       L            +    E  +K +
Sbjct: 71  ESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLL-----------TIDP--EYYKKFM 117

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  GA     A+   +       IVN SS                             
Sbjct: 118 SVNLDGALWCTRAVYKKMTKRGGGAIVNQSS----------------------------- 148

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                           T  W  +   Y L+K  +N  T+ L+++    N  IN + PG +
Sbjct: 149 ----------------TAAWLYS-NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPI 191

Query: 247 KTEMT 251
            TE  
Sbjct: 192 DTEAN 196

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  121 bits (307), Expect = 2e-33
 Identities = 51/259 (19%), Positives = 80/259 (30%), Gaps = 72/259 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA+ GIG  +  +    G   +  +  + G  +                + DV +P
Sbjct: 11  VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAKY------------DHIECDVTNP 58

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +  D I   +G + +LVNNAGI                         +     + +
Sbjct: 59  DQVKASIDHIFKEYGSISVLVNNAGIESYGKIESM----------------SMGEWRRII 102

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G     +  IP +  S    IVN+SS                             
Sbjct: 103 DVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA-------------------------- 136

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYVK 247
                           +     NA+AY+ SK A+   T+ +A  Y P    N VCP  + 
Sbjct: 137 ----------------SIITK-NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATID 179

Query: 248 TEMTYNAGRLTVEEGAESP 266
           T +   A  L V       
Sbjct: 180 TPLVRKAAELEVGSDPMRI 198

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  122 bits (308), Expect = 2e-33
 Identities = 57/253 (22%), Positives = 93/253 (36%), Gaps = 70/253 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTG ++GIG  + + L   G    + ARD +   +   +L   G  +      D++
Sbjct: 30  RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLS 87

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE- 125
             A    +A  +     +LDILVNNAG +                   G   ++Y  +  
Sbjct: 88  SEAGARRLAQALGELSARLDILVNNAGTS------------------WGAALESYPVSGW 129

Query: 126 -KCLQTNYLGAKRMCEALIPLLQ----LSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            K +Q N        + L+PLL+      + AR++N+ S  G                  
Sbjct: 130 EKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG------------------ 171

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCI 238
                                          A AY  SKAA++  +R+LAK+    +  +
Sbjct: 172 ------------------------ISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINV 207

Query: 239 NCVCPGYVKTEMT 251
           N + PG   + MT
Sbjct: 208 NVIAPGRFPSRMT 220

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  121 bits (307), Expect = 2e-33
 Identities = 50/259 (19%), Positives = 85/259 (32%), Gaps = 61/259 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDVAD 67
            ++TG   G+G     +LA  G    L     +G   +   +  +  D  V+    DV+D
Sbjct: 16  VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD 75

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
            A + +        FG++D   NNAGI G  +                  + T    +K 
Sbjct: 76  EAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT---------------ESFTAAEFDKV 120

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  N  G     E ++ +++   S  +VN +S  G                         
Sbjct: 121 VSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG------------------------- 155

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                             +G   N + Y  +K  +   TR  A +Y  + I  N + PG 
Sbjct: 156 -----------------IRGIG-NQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGA 197

Query: 246 VKTEMTYNAGRLTVEEGAE 264
           + T M  N+ +    E   
Sbjct: 198 IWTPMVENSMKQLDPENPR 216

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  121 bits (306), Expect = 2e-33
 Identities = 45/259 (17%), Positives = 73/259 (28%), Gaps = 61/259 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            V++G   GIG    + L   G   V     +   + A                 D++  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRD-AEVIA-----------------DLSTA 45

Query: 69  AAI-HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
                ++AD +      +D LV  AG+   +     +                       
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNV----------------------- 82

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  NY GA  + +A +P L+       V +SS            A      A  L     
Sbjct: 83  VSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS------AHLAFDKNPLALALEAGEE 136

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
            +  +           E  G      AY  SK A+    R  A  +    +  N + PG 
Sbjct: 137 AKARAIV---------EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGA 187

Query: 246 VKTEMTYNAGRLTVEEGAE 264
            +T +      L      E
Sbjct: 188 TETPLL--QAGLQDPRYGE 204

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  121 bits (307), Expect = 3e-33
 Identities = 65/284 (22%), Positives = 98/284 (34%), Gaps = 79/284 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TGA KGIG ++ R  A  G   VL+ RD      A   L      +V    +D+A
Sbjct: 21  KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA 80

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +P A   +A      FG LD+LVNNAGI+      DT                  +  + 
Sbjct: 81  EPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDT----------------DPQLFDA 124

Query: 127 CLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
            +  N      +  A+   ++   +   I+ V+S+                         
Sbjct: 125 TIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA--------------------- 163

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP 243
                                  P +  AY  SKA +   T++LA++        N VCP
Sbjct: 164 ---------------------PLP-DHYAYCTSKAGLVMATKVLARELGPHGIRANSVCP 201

Query: 244 GYVKTEMTYN----------------AGRL-TVEEGAESPVWLA 270
             V TEM                    GR     E +++ VWLA
Sbjct: 202 TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLA 245

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  121 bits (305), Expect = 4e-33
 Identities = 41/284 (14%), Positives = 87/284 (30%), Gaps = 81/284 (28%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M  ++    ++TGA++ +G     +L  +G   +++ R E   +  + +         + 
Sbjct: 23  MTLSSAP-ILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG------AVA 75

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              D +    I +  D +++    L  +V+NA                          + 
Sbjct: 76  LYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEW-----LAET------------PGEE 118

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            ++  +    + L    +     PLL  S+ A IV++S  + +                 
Sbjct: 119 ADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR----------------- 161

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN 239
                                    KG      AY  +KA + + T   A ++ P   +N
Sbjct: 162 -------------------------KGSS-KHIAYCATKAGLESLTLSFAARFAPLVKVN 195

Query: 240 CVCPGYVKTEMTYNA------------GRL-TVEEGAESPVWLA 270
            + P  +  +   +A            G     E   +S  +L 
Sbjct: 196 GIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLL 239

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  121 bits (305), Expect = 6e-33
 Identities = 52/285 (18%), Positives = 94/285 (32%), Gaps = 86/285 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG   GIG       A NG   V+   +E   +    ++           ++DV+  
Sbjct: 30  CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS----KAFGVRVDVSSA 85

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
               S+ +   + +G++D+LVNNAG     +                      E+ ++ +
Sbjct: 86  KDAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTI----------------PEETWDRIM 129

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G     + +IP+++ +    I+N +S                             
Sbjct: 130 SVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA-------------------------- 163

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                           T     +  AY+ SK A+++ TR +A  +    I  N V PG +
Sbjct: 164 ----------------TSAIA-DRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTI 206

Query: 247 KTEMTYNA--------------------GRL-TVEEGAESPVWLA 270
            +                           R+ T EE AE+ ++LA
Sbjct: 207 DSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLA 251

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  121 bits (306), Expect = 6e-33
 Identities = 53/286 (18%), Positives = 92/286 (32%), Gaps = 63/286 (22%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           ++    R AVVTG   GIG     + A  G   VL+  D+    +AV  L+  GFD    
Sbjct: 26  LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFD-AHG 84

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     +  +AD      G +D++ +NAGI          +G + +          
Sbjct: 85  VVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVV--------AGPLAQ--------MN 128

Query: 121 YESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
           ++     +  +  G+    EA +P LL+      I   +S  G +               
Sbjct: 129 HDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--------------- 173

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI- 238
                                 +            Y ++K  +      LA++     I 
Sbjct: 174 ---------------------PNA-------GLGTYGVAKYGVVGLAETLAREVKPNGIG 205

Query: 239 -NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFS 283
            + +CP  V+T++  N+ R+   +   S                 S
Sbjct: 206 VSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVS 251

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  119 bits (302), Expect = 6e-33
 Identities = 59/260 (22%), Positives = 82/260 (31%), Gaps = 75/260 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG +KGIG  VV  L  N   TV+    ++              +N+ F + D+   
Sbjct: 7   YLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA----------ENLKFIKADLTKQ 56

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             I +V D I+      D +  NAGI    S  D                   ES +K L
Sbjct: 57  QDITNVLDIIK--NVSFDGIFLNAGILIKGSIFDI----------------DIESIKKVL 98

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N   +    + L   L+    A IV   S                             
Sbjct: 99  DLNVWSSIYFIKGLENNLK--VGASIVFNGSDQC-------------------------- 130

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                               P N+ AY LSK A+   T+ LA     + I  N VCPG V
Sbjct: 131 ----------------FIAKP-NSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTV 173

Query: 247 KTEMTYNAGRLTVEEGAESP 266
            T++  N  +        S 
Sbjct: 174 DTDLYRNLIQKYANNVGISF 193

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  119 bits (302), Expect = 8e-33
 Identities = 59/280 (21%), Positives = 90/280 (32%), Gaps = 81/280 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG  +G+G E  RQ    G   VL    ++ G     +L     D   +  LDV   
Sbjct: 8   VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG----DAARYQHLDVTIE 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                V  + R  FG +D LVNNAGI+                        + E   K +
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETE----------------SVERFRKVV 107

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N  G     + +IP ++ +    IVN+SS+ G +                        
Sbjct: 108 EINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLM------------------------ 143

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                       G           ++Y  SK  +   +++ A +     I  N V PG  
Sbjct: 144 ------------GLA-------LTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMT 184

Query: 247 KTEMTYNA--------------GRL--TVEEGAESPVWLA 270
            T MT                 GR+     E A + V L 
Sbjct: 185 YTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL 224

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  120 bits (303), Expect = 1e-32
 Identities = 51/246 (20%), Positives = 79/246 (32%), Gaps = 55/246 (22%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG N+GIG    R +A  G    +  R     +E  EK+          +Q DV++ 
Sbjct: 17  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 76

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +      I +  G +  L+ NAG++         +              T+E      
Sbjct: 77  DIVTKTIQQIDADLGPISGLIANAGVS-----VVKPA-----------TELTHEDFAFVY 120

Query: 129 QTNYLGAKRMCEALI-PLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
             N  G    C A+    LQ      IV  SS   +++                      
Sbjct: 121 DVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQ-------------------- 160

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                              G       Y  SKAA +   + LA ++ +  I  N + PGY
Sbjct: 161 ---------------SSLNG-SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGY 204

Query: 246 VKTEMT 251
           V T+ T
Sbjct: 205 VNTDQT 210

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  120 bits (303), Expect = 1e-32
 Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 64/270 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           MA      A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G +    
Sbjct: 17  MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVE-ADG 75

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV     I ++   +   +G +D+LVNNAG  G        +               
Sbjct: 76  RTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPG-----GGAT-----------AELA 119

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQL--SDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
            E     ++TN  G  R+ + ++    +    + RIVN++S+ GK         +GV   
Sbjct: 120 DELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK---------QGV--- 167

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                           +AA Y  SK  +  +T+ L  +     I
Sbjct: 168 -------------------------------VHAAPYSASKHGVVGFTKALGLELARTGI 196

Query: 239 --NCVCPGYVKTEMTYNAGRLTVEEGAESP 266
             N VCPG+V+T M  +      +    S 
Sbjct: 197 TVNAVCPGFVETPMAASVREHYSDIWEVST 226

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  119 bits (302), Expect = 1e-32
 Identities = 56/250 (22%), Positives = 94/250 (37%), Gaps = 65/250 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTGA++GIG  +  +LA +G   V+  A       E   K++ +G   +   Q DV+D
Sbjct: 30  AIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA-QADVSD 88

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           PAA+  +       FG +D+LVNNAGI  +++ A+T                     ++ 
Sbjct: 89  PAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAET----------------GDAVFDRV 132

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  N  G           L+     RI+N+S+S   L+                      
Sbjct: 133 IAVNLKGTFNTLREAAQRLR--VGGRIINMSTSQVGLL---------------------- 168

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
                                  +   Y  +KA + A T +L+K+    +  +N V PG 
Sbjct: 169 ---------------------HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGP 207

Query: 246 VKTEMTYNAG 255
             T++     
Sbjct: 208 TATDLFLEGK 217

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  119 bits (301), Expect = 2e-32
 Identities = 44/291 (15%), Positives = 86/291 (29%), Gaps = 83/291 (28%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDN 57
             +   +  V+ G  K +G    +  AL     ++    A+D     +  ++L+  G   
Sbjct: 6   YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAK- 64

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
           V  +Q D+++   +  + DF    FGK+DI +N  G        +T              
Sbjct: 65  VALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVET-------------- 110

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
             +    +     N   A    +     +    +  I+ +++SL                
Sbjct: 111 --SEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAY------------ 154

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--N 235
                                              + Y  +KA +  YTR  +K+     
Sbjct: 155 -------------------------------TGFYSTYAGNKAPVEHYTRAASKELMKQQ 183

Query: 236 FCINCVCPGYVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
             +N + PG + T   Y                  +L  +E+ A    +L 
Sbjct: 184 ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLT 234

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  119 bits (301), Expect = 2e-32
 Identities = 49/272 (18%), Positives = 85/272 (31%), Gaps = 60/272 (22%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TG   G+G  +V +    G    +  +  +   E        G  N +    DV   
Sbjct: 8   ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---G-GNAVGVVGDVRSL 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                 A+   + FGK+D L+ NAGI      +  L+   E+        +   + +   
Sbjct: 64  QDQKRAAERCLAAFGKIDTLIPNAGIWD---YSTALADLPED--------KIDAAFDDIF 112

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G     +A +P L +S    +V   S+ G                          
Sbjct: 113 HVNVKGYIHAVKACLPAL-VSSRGSVVFTISNAG-------------------------- 145

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYVK 247
                                     Y  +K A+    R +A +  P+  +N V PG + 
Sbjct: 146 ----------------FYPNG-GGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMN 188

Query: 248 TEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           T++   +     E+   S     +L    P G
Sbjct: 189 TDLRGPSSLGLSEQSISSVPLADMLKSVLPIG 220

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  119 bits (300), Expect = 3e-32
 Identities = 56/283 (19%), Positives = 91/283 (32%), Gaps = 81/283 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            V+TG++ G+G  +  + A      V+     E      +E++K  G +  I  + DV  
Sbjct: 10  VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGE-AIAVKGDVTV 68

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
            + + ++       FGKLD+++NNAG+          S              +     K 
Sbjct: 69  ESDVINLVQSAIKEFGKLDVMINNAGLEN-----PVSS-----------HEMSLSDWNKV 112

Query: 128 LQTNYLGAKRMC-EALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
           + TN  GA     EA+   ++      ++N+SS   K+                      
Sbjct: 113 IDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI---------------------- 150

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                                WP     Y  SK  M   T  LA +Y      +N + PG
Sbjct: 151 --------------------PWP-LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPG 189

Query: 245 YVKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
            + T +                    G +   EE A    WLA
Sbjct: 190 AINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA 232

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  119 bits (300), Expect = 3e-32
 Identities = 60/275 (21%), Positives = 93/275 (33%), Gaps = 65/275 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
             + A + A+VTGA  GIG  V R+LA  G   +    D      A  K+          
Sbjct: 24  HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGC----GAAA 79

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            ++DV+D   I ++ D   + FG +D LV NAG+  ++S  DT                T
Sbjct: 80  CRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDT----------------T 123

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  ++ +  N  GA    +   P +       IVN+SS  G++                
Sbjct: 124 VEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV---------------- 167

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                            AY +SKA +   +RI A +  +  I  
Sbjct: 168 --------------------------AVG-GTGAYGMSKAGIIQLSRITAAELRSSGIRS 200

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLH 273
           N + P +V T M   A  +             +  
Sbjct: 201 NTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIAR 235

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  118 bits (299), Expect = 3e-32
 Identities = 53/262 (20%), Positives = 86/262 (32%), Gaps = 68/262 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TGA  G G  + ++ A  G   V+  RD+ G      ++     D  +    D++  
Sbjct: 12  ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG----DAALAVAADISKE 67

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A + +  +   S FGK+DILVNNAGI              E            E  ++ +
Sbjct: 68  ADVDAAVEAALSKFGKVDILVNNAGIGH-------KPQNAEL--------VEPEEFDRIV 112

Query: 129 QTNYLGAKRMCEALIPLLQL----SDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
             N  G   M   LIP  +          I+NV+S+                        
Sbjct: 113 GVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA---------------------- 150

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                +  P N A Y  +K  + + T+ LA +     I    + 
Sbjct: 151 --------------------GRPRP-NLAWYNATKGWVVSVTKALAIELAPAKIRVVALN 189

Query: 243 PGYVKTEMTYNAGRLTVEEGAE 264
           P   +T +         EE  +
Sbjct: 190 PVAGETPLLTTFMGEDSEEIRK 211

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  119 bits (300), Expect = 3e-32
 Identities = 64/280 (22%), Positives = 95/280 (33%), Gaps = 79/280 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TGA  GIG E  R LA  G   VL    E     A   +   G    + H +D+ + 
Sbjct: 14  AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---G-RGAVHHVVDLTNE 69

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            ++ ++ DF    FG+LDI+ NNA  +   +D                   T +  +   
Sbjct: 70  VSVRALIDFTIDTFGRLDIVDNNAAHSD-PADMLV-------------TQMTVDVWDDTF 115

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G   MC+  IP L  +    IVN+SS+                            
Sbjct: 116 TVNARGTMLMCKYAIPRLISAGGGAIVNISSATA-------------------------- 149

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                              +   + AY  +KAA+   TR +A +Y       N + PG V
Sbjct: 150 ----------------HAAYD-MSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLV 192

Query: 247 KTEMTYNA---------------GRL-TVEEGAESPVWLA 270
           +T                     GR+    E AE   +LA
Sbjct: 193 RTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLA 232

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  118 bits (299), Expect = 4e-32
 Identities = 61/285 (21%), Positives = 98/285 (34%), Gaps = 87/285 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            VVTG  +GIG  +VR    +G   V+  +DE GG    ++L        +F   DV   
Sbjct: 12  VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQE 66

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + ++       FG+LD +VNNAG               EE         + +   + L
Sbjct: 67  DDVKTLVSETIRRFGRLDCVVNNAGHHP-------PPQRPEE--------TSAQGFRQLL 111

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N LG   + +  +P L+ S    ++N+SS +G                          
Sbjct: 112 ELNLLGTYTLTKLALPYLRKS-QGNVINISSLVG-------------------------- 144

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                             G    A  Y+ +K A+ A T+ LA     + +  NC+ PG +
Sbjct: 145 ----------------AIGQA-QAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNI 187

Query: 247 KTEMTYNA--------------------GRL-TVEEGAESPVWLA 270
            T +                        GR+    E   + V+LA
Sbjct: 188 WTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLA 232

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  118 bits (298), Expect = 5e-32
 Identities = 51/254 (20%), Positives = 82/254 (32%), Gaps = 71/254 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M    ++  V+TGA++GIG  +VR         V T+R  K   +            +  
Sbjct: 23  MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD----------IHT 72

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              D++ P     +       FG++D LVNNAG+                      +  T
Sbjct: 73  VAGDISKPETADRIVREGIERFGRIDSLVNNAGVF-----LAKPF-----------VEMT 116

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E  +  L  N  G   + +     +    S  IV++++SL                   
Sbjct: 117 QEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLV------------------ 158

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANA-AAYILSKAAMNAYTRILAKKYP--NFC 237
                                    +       A   L+K  +NA TR LA ++      
Sbjct: 159 ------------------------DQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVR 194

Query: 238 INCVCPGYVKTEMT 251
           +N V PG +KT M 
Sbjct: 195 VNAVSPGVIKTPMH 208

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  118 bits (298), Expect = 5e-32
 Identities = 63/281 (22%), Positives = 91/281 (32%), Gaps = 76/281 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     + A+VTGA  GIG  VV  L   G    +  R   G                + 
Sbjct: 23  MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD------------LH 70

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              D+ + A    +   + +  G+LDI+VNNAG+       +T                T
Sbjct: 71  LPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITET----------------T 114

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
                  L  N     R+C A IPL+  +    IVNV+S  G                  
Sbjct: 115 DADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG------------------ 156

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                    +  P   A Y L+KAA+ + T+ +   +    I  
Sbjct: 157 ------------------------LRPGP-GHALYCLTKAALASLTQCMGMDHAPQGIRI 191

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           N VCP  V T M         + G +    +A L +  P G
Sbjct: 192 NAVCPNEVNTPML---RTGFAKRGFDPDRAVAELGRTVPLG 229

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  118 bits (298), Expect = 6e-32
 Identities = 59/286 (20%), Positives = 99/286 (34%), Gaps = 64/286 (22%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVI 59
                 + AV+TG+  GIG  + R LA  G   VL        +  V +++       V+
Sbjct: 20  FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVL 79

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
            H  D+  P+ I  +   +   FG  DILVNNAG+  +    D                 
Sbjct: 80  HHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFVEKIEDF---------------- 123

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             E  ++ +  N   +       IP ++     RI+N++S+ G +               
Sbjct: 124 PVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLV--------------- 168

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI- 238
                                 SP         +AY+ +K  +   T+ +A +     + 
Sbjct: 169 ---------------------ASP-------FKSAYVAAKHGIMGLTKTVALEVAESGVT 200

Query: 239 -NCVCPGYVKTEMTYN--AGRLTVEEGAESPVWLALLHKGGPSGLF 281
            N +CPGYV T +       +       E  V   ++ KG P+  F
Sbjct: 201 VNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKF 246

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  118 bits (298), Expect = 6e-32
 Identities = 54/265 (20%), Positives = 88/265 (33%), Gaps = 64/265 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVI 59
            A    + A+VTGA +GIG E+  +L   G   ++  A   +   E V  +K +G D   
Sbjct: 24  SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC 83

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             + +V     I  + +     FGKLDI+ +N+G+       D                 
Sbjct: 84  V-KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV---------------- 126

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
           T E  ++    N  G   +       L+     R++ + S  G+                
Sbjct: 127 TPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAK-------------- 170

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFC 237
                                        P   A Y  SK A+  + R +A         
Sbjct: 171 ---------------------------AVP-KHAVYSGSKGAIETFARCMAIDMADKKIT 202

Query: 238 INCVCPGYVKTEMTYNAGRLTVEEG 262
           +N V PG +KT+M +   R  +  G
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNG 227

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  118 bits (297), Expect = 7e-32
 Identities = 64/289 (22%), Positives = 101/289 (34%), Gaps = 80/289 (27%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           +     +VTG ++GIG  V R  A  G    +  A + +     V  +  SG + V    
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI-P 82

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            DV + A I ++   +   FG+LD LVNNAGI             ++E      M+   E
Sbjct: 83  GDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVD-------YPQRVDE------MSV--E 127

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSA---RIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             E+ L+ N  G+       +  +    S     IVNVSS    L               
Sbjct: 128 RIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL--------------- 172

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFC 237
                                      G       Y  SKAA++ +T  LA++       
Sbjct: 173 ---------------------------GSATQYVDYAASKAAIDTFTIGLAREVAAEGIR 205

Query: 238 INCVCPGYVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
           +N V PG ++T++  +                 R    EE A++ ++L 
Sbjct: 206 VNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLL 254

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  119 bits (299), Expect = 8e-32
 Identities = 52/269 (19%), Positives = 90/269 (33%), Gaps = 64/269 (23%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG----LEAVEKLKHSGFDNVI 59
            +K+  ++TGA+ G G      LA  G     + RD  G     +EA+         ++ 
Sbjct: 3   MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLR 62

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             +LDV    ++    D I    G++D+L++NAG          + G  E          
Sbjct: 63  TLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGH--------MVFGPAEAF-------- 106

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
           T E   +    N L  +R+  A +P ++      ++ +SSS                   
Sbjct: 107 TPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAG--------------- 151

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN 239
                                      G P   A Y  +KAAM+A     A++   + I 
Sbjct: 152 ---------------------------GTPPYLAPYFAAKAAMDAIAVQYARELSRWGIE 184

Query: 240 --CVCPGYVKTEMTYNAGRLTVEEGAESP 266
              + PG   +   + A     ++ A   
Sbjct: 185 TSIIVPGAFTSGTNHFAHSGVPDDHARQA 213

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  117 bits (295), Expect = 9e-32
 Identities = 31/255 (12%), Positives = 59/255 (23%), Gaps = 65/255 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VT A    G   V  L  +G   V          E       +               
Sbjct: 4   ALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP-------GTIALAE 56

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                + D    H   +D +V+N  I             +E          +     +  
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYIPR-----PMNRLPLEG--------TSEADIRQMF 103

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           +   +    + ++ I  L+ +  A ++ ++SS+GK                         
Sbjct: 104 EALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK------------------------ 139

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGYV 246
                                     Y  ++AA  A     AK        +  + P + 
Sbjct: 140 ------------------PLA-YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFF 180

Query: 247 KTEMTYNAGRLTVEE 261
                +         
Sbjct: 181 NNPTYFPTSDWENNP 195

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  118 bits (297), Expect = 9e-32
 Identities = 56/248 (22%), Positives = 87/248 (35%), Gaps = 64/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A VTG ++GIG  + ++LAL G    LT     +     V +++ +G   V   + D 
Sbjct: 32  KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI-RADN 90

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            D  AI           G LDILVN+AGI   +   +T                T    +
Sbjct: 91  RDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEET----------------TVADFD 134

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + +  N+        +    L   D  RI+ + S+L +L+                    
Sbjct: 135 EVMAVNFRAPFVAIRSASRHLG--DGGRIITIGSNLAELV-------------------- 172

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                                 WP   + Y  SKAA+   T+ LA+        +N V P
Sbjct: 173 ---------------------PWP-GISLYSASKAALAGLTKGLARDLGPRGITVNIVHP 210

Query: 244 GYVKTEMT 251
           G   T+M 
Sbjct: 211 GSTDTDMN 218

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  117 bits (296), Expect = 1e-31
 Identities = 56/259 (21%), Positives = 89/259 (34%), Gaps = 64/259 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+ TGA +GIG  +  +L   G   V+      K   E V +LK  G   V   Q D++ 
Sbjct: 24  ALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI-QADISK 82

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           P+ + ++ D   SHFG LD +++N+G+     + +                 T E  +K 
Sbjct: 83  PSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEV----------------TQELFDKV 126

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
              N  G   + +  +   +     RI+  SS    +  +                    
Sbjct: 127 FNLNTRGQFFVAQQGLKHCR--RGGRIILTSSIAAVMTGI-------------------- 164

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
                                  N A Y  SKAA+  + R  A         +NC+ PG 
Sbjct: 165 ----------------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGG 202

Query: 246 VKTEMTYNAGRLTVEEGAE 264
           VKT+M           G +
Sbjct: 203 VKTDMFDENSWHYAPGGYK 221

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  117 bits (296), Expect = 1e-31
 Identities = 65/249 (26%), Positives = 91/249 (36%), Gaps = 64/249 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A VTG + GIG  V R LA  GI     ARD K    AV+ L+ +G D V     DV 
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD-VDGSSCDVT 83

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               +H+        FG + ILVN+AG  G        +           +         
Sbjct: 84  STDEVHAAVAAAVERFGPIGILVNSAGRNG-----GGET---------ADLDD--ALWAD 127

Query: 127 CLQTNYLGAKRMCEALIPLLQLSD--SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            L TN  G  R+   ++    + +    RIVN++S+ GK         +GV         
Sbjct: 128 VLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGK---------QGV--------- 169

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                      AA Y  SK  +  +T+ +  +     I  N VC
Sbjct: 170 -------------------------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204

Query: 243 PGYVKTEMT 251
           PGYV+T M 
Sbjct: 205 PGYVETPMA 213

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  117 bits (294), Expect = 1e-31
 Identities = 34/249 (13%), Positives = 57/249 (22%), Gaps = 77/249 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +V G +  +G EVV+        T+     E    +                 +  +
Sbjct: 23  KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH-------------SFTIKDS 69

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               I SV + I S   K+D  V  AG     + +                    +S + 
Sbjct: 70  GEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDE---------------FLKSVKG 114

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N   A         LL        V   +S                          
Sbjct: 115 MIDMNLYSAFASAHIGAKLLN--QGGLFVLTGASAA------------------------ 148

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVC 242
                                      AY  +KAA +   + LA +            + 
Sbjct: 149 ------------------LNRTS-GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGIL 189

Query: 243 PGYVKTEMT 251
           P  + T   
Sbjct: 190 PVTLDTPTN 198

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  117 bits (295), Expect = 2e-31
 Identities = 59/259 (22%), Positives = 102/259 (39%), Gaps = 68/259 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVI 59
           M + A+  A+VTG  +GIG  + R LA +G    +T   D +G    + +L   G   VI
Sbjct: 24  MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGAR-VI 82

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
           F + D+AD ++  +  D + + FG++D LVNNAGI  I  D      F+        +  
Sbjct: 83  FLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRD-----DFL-------DLKP 130

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLL---QLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
             E+ +  +  N  G     +A++  +       S  I+N++S    +            
Sbjct: 131 --ENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM------------ 176

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANA--AAYILSKAAMNAYTRILAKKYP 234
                                             +     Y +SKA + A+++ LA +  
Sbjct: 177 ---------------------------------TSPERLDYCMSKAGLAAFSQGLALRLA 203

Query: 235 NFCI--NCVCPGYVKTEMT 251
              I    V PG ++++MT
Sbjct: 204 ETGIAVFEVRPGIIRSDMT 222

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  116 bits (294), Expect = 2e-31
 Identities = 49/246 (19%), Positives = 79/246 (32%), Gaps = 61/246 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TGA+ GIG +V    A  G    + AR         +++   G    +  + DV  P
Sbjct: 35  ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK-ALPIRCDVTQP 93

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +  + D +    G +DI V NAGI                   +  +    E  ++  
Sbjct: 94  DQVRGMLDQMTGELGGIDIAVCNAGIV----------------SVQAMLDMPLEEFQRIQ 137

Query: 129 QTNYLGAKRMC-EALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
            TN  G       A   ++       I+  +S  G                         
Sbjct: 138 DTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG------------------------- 172

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGY 245
                                P   + Y  SKAA+   T+ +A +     I  N V PGY
Sbjct: 173 ----------------HIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGY 216

Query: 246 VKTEMT 251
           ++TE+ 
Sbjct: 217 IRTELV 222

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  116 bits (293), Expect = 2e-31
 Identities = 57/292 (19%), Positives = 98/292 (33%), Gaps = 90/292 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG+  GIG  + + LA  G   VL    +     A+ ++   G    + H  D++
Sbjct: 5   KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVK-AVHHPADLS 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A I ++       FG +DILVNNAGI  ++                       ES +K
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQF----------------PLESWDK 105

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N           +P ++  +  RI+N++S  G +                      
Sbjct: 106 IIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLV---------------------- 143

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                         GS          AAY+ +K  +   T+++  +     +  N +CPG
Sbjct: 144 --------------GST-------GKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPG 182

Query: 245 YVKTEMTYN-------------------------AGRL-TVEEGAESPVWLA 270
           +V T +                            +    T E   E  ++L 
Sbjct: 183 WVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLC 234

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  116 bits (292), Expect = 2e-31
 Identities = 44/249 (17%), Positives = 68/249 (27%), Gaps = 73/249 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +   A  GIG +  R+L    +   +     +      E    +   N+ FH  DV  P
Sbjct: 8   VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVP 67

Query: 69  AA-IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
            A    +   I      +DIL+N AGI     D                        E+ 
Sbjct: 68  VAESKKLLKKIFDQLKTVDILINGAGIL---DDHQI---------------------ERT 103

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSAR---IVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  N+ G      A++             I N+ S  G                      
Sbjct: 104 IAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG---------------------- 141

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                         Y  SKAA+ ++T  LAK  P   +    + 
Sbjct: 142 --------------FNAIH-------QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSIN 180

Query: 243 PGYVKTEMT 251
           PG  +T + 
Sbjct: 181 PGITRTPLV 189

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  116 bits (292), Expect = 3e-31
 Identities = 57/286 (19%), Positives = 89/286 (31%), Gaps = 88/286 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG   G+G EVV+ L   G     +  +E  G +   +L     +  +F + DV+  
Sbjct: 9   ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVSSE 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A    V   ++   G L++LVNNAGI                           E   + L
Sbjct: 65  ADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETG----------------RLEDFSRLL 108

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N       C+  I  ++      I+N++S                             
Sbjct: 109 KINTESVFIGCQQGIAAMK-ETGGSIINMASVSS-------------------------- 141

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI--NCVCPG 244
                                   A Y  SKAA++A TR  A       + I  N + P 
Sbjct: 142 ----------------WLPIE-QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPD 184

Query: 245 YVKTEMTYNA-------------------GRL-TVEEGAESPVWLA 270
            + T M   +                   GR    E  A+  ++LA
Sbjct: 185 GIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  116 bits (293), Expect = 3e-31
 Identities = 56/267 (20%), Positives = 87/267 (32%), Gaps = 64/267 (23%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVI 59
                 + A+VTG+ +GIG  V   L   G   V+  A   K   + V ++K  G D + 
Sbjct: 13  PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA 72

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             + D+     I  + D   +HFG LDI V+N+G+       D                 
Sbjct: 73  I-KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDV---------------- 115

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
           T E  ++    N  G   +       L   +  RIV  SS+  K                
Sbjct: 116 TEEEFDRVFSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNTSKDF-------------- 159

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFC 237
                                        P   + Y  SK A++++ RI +K        
Sbjct: 160 ---------------------------SVP-KHSLYSGSKGAVDSFVRIFSKDCGDKKIT 191

Query: 238 INCVCPGYVKTEMTYNAGRLTVEEGAE 264
           +N V PG   T+M +      +  G  
Sbjct: 192 VNAVAPGGTVTDMFHEVSHHYIPNGTS 218

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  116 bits (292), Expect = 3e-31
 Identities = 50/253 (19%), Positives = 73/253 (28%), Gaps = 68/253 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M   A +  +VTG  +GIG  + +  A  G +  L     +G  E  E +         F
Sbjct: 1   MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAIGG------AF 53

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q+D+ D        +      G++D+LVNNA I    S                     
Sbjct: 54  FQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTV----------------R 97

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
                + L+ N      +       ++      IVNV+S  G                  
Sbjct: 98  LPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG------------------ 139

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI 238
                                           AAY  SK  +   TR LA         +
Sbjct: 140 ------------------------LFAEQ-ENAAYNASKGGLVNLTRSLALDLAPLRIRV 174

Query: 239 NCVCPGYVKTEMT 251
           N V PG + TE  
Sbjct: 175 NAVAPGAIATEAV 187

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  115 bits (291), Expect = 4e-31
 Identities = 58/269 (21%), Positives = 90/269 (33%), Gaps = 66/269 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           + + + R A+VTG +KGIG  + R L   G    +   D       V  L++ G      
Sbjct: 7   IFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG----FA 62

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            ++DV   A++ +         G  D+L  NAG++         +           +  T
Sbjct: 63  VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVS-----TMRPA-----------VDIT 106

Query: 121 YESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
            E  +     N  G     +      L  +    IVN +S   K+               
Sbjct: 107 DEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV--------------- 151

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI- 238
                                G+P         A Y  SK A+  +T+ LA++     I 
Sbjct: 152 ---------------------GAP-------LLAHYSASKFAVFGWTQALAREMAPKNIR 183

Query: 239 -NCVCPGYVKTEMTYNAGRLTVEEGAESP 266
            NCVCPG+VKT M         E    +P
Sbjct: 184 VNCVCPGFVKTAMQEREIIWEAELRGMTP 212

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  115 bits (291), Expect = 6e-31
 Identities = 43/246 (17%), Positives = 78/246 (31%), Gaps = 66/246 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDVAD 67
           A+VTG+  GIG  +   L   G   ++  R E+   E +++++    D  +     D+  
Sbjct: 13  ALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGT 72

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
                 V +     + K+DIL+NN GI               +      +    E   K 
Sbjct: 73  EQGCQDVIE----KYPKVDILINNLGIFE--------PVEYFD------IPD--EDWFKL 112

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
            + N +   R+  + +  +      R++ ++S                            
Sbjct: 113 FEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAA------------------------- 147

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
                         S E        A Y  +K    + +R LA+     N  +N + PG 
Sbjct: 148 -----------IMPSQEM-------AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGS 189

Query: 246 VKTEMT 251
             TE  
Sbjct: 190 TLTEGV 195

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  114 bits (288), Expect = 8e-31
 Identities = 48/245 (19%), Positives = 73/245 (29%), Gaps = 70/245 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++T A +GIG       A  G   + T  +E    E  +         +    LDV   
Sbjct: 9   IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP------GIQTRVLDVTKK 62

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             I   A+       +LD+L N AG     +  D                   +  +  +
Sbjct: 63  KQIDQFAN----EVERLDVLFNVAGFVHHGTVLDC----------------EEKDWDFSM 102

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N      M +A +P +    S  I+N+SS    +                        
Sbjct: 103 NLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV------------------------ 138

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                            KG   N   Y  +KAA+   T+ +A  +       NCVCPG V
Sbjct: 139 -----------------KGVV-NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTV 180

Query: 247 KTEMT 251
            T   
Sbjct: 181 DTPSL 185

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  116 bits (293), Expect = 9e-31
 Identities = 52/267 (19%), Positives = 90/267 (33%), Gaps = 67/267 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-------LEAVEKLKHSGFDNVIFH 61
             +TGA++GIG  +  + A +G   V+ A+  +           A E+++  G    +  
Sbjct: 48  VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK-ALPC 106

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
            +DV D   I +  +     FG +DILVNNA    +++  DT                  
Sbjct: 107 IVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDT----------------PT 150

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           +  +  +  N  G     +A IP L+ S  A I+N+S  L                    
Sbjct: 151 KRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN------------------- 191

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC 240
                                     W     AY ++K  M+ Y   +A+++     +N 
Sbjct: 192 ----------------------LNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNA 229

Query: 241 VCPGY-VKTEMTYNAGRLTVEEGAESP 266
           + P   + T      G   +E      
Sbjct: 230 LWPKTAIHTAAMDMLGGPGIESQCRKV 256

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  114 bits (289), Expect = 1e-30
 Identities = 39/258 (15%), Positives = 72/258 (27%), Gaps = 60/258 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A++TG   GIG    +     G   V+    +  G +    +       + F   DV   
Sbjct: 19  AIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVTKD 76

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + ++ D   +  GKLDI+  N G+                      +    E  ++ +
Sbjct: 77  EDVRNLVDTTIAKHGKLDIMFGNVGVLS--------------TTPYSILEAGNEDFKRVM 122

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  GA  + +    ++  +    IV  +S                             
Sbjct: 123 DINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT------------------------ 158

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                                  +  Y  +K A+   T  L  +   + I  NCV P  V
Sbjct: 159 ------------------AGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIV 200

Query: 247 KTEMTYNAGRLTVEEGAE 264
            + +  +   +      E
Sbjct: 201 ASPLLTDVFGVDSSRVEE 218

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  115 bits (290), Expect = 1e-30
 Identities = 71/302 (23%), Positives = 105/302 (34%), Gaps = 84/302 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  V+TGAN G+G    R+LA  G   ++  RD + G  A   +       V   +LD+ 
Sbjct: 17  RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA----GQVEVRELDLQ 72

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D +++   AD         D+L+NNAGI  +   A T+ GF                 E 
Sbjct: 73  DLSSVRRFAD----GVSGADVLINNAGIMAV-PYALTVDGF-----------------ES 110

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            + TN+LG      AL  LL    + R+V VSS       + H   +    D        
Sbjct: 111 QIGTNHLG----HFALTNLLLPRLTDRVVTVSS-------MAHWPGRINLED-------- 151

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVC 242
                   LN        ++ +     AY  SK A   +T  L ++              
Sbjct: 152 --------LNW------RSRRYSP-WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAH 196

Query: 243 PGYVKTEMTYNAGRL---------------TVEEGAESPVWLAL--LHKG---GPSGLFF 282
           PGY  T +   +GR                  + GA   ++ A   L      GP   + 
Sbjct: 197 PGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVGPRFGYL 256

Query: 283 SR 284
            R
Sbjct: 257 GR 258

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  114 bits (288), Expect = 1e-30
 Identities = 53/287 (18%), Positives = 100/287 (34%), Gaps = 88/287 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG + G+G  +  + A  G   V+T R ++   EA  +++      ++  Q+DV + 
Sbjct: 9   VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQ-ILTVQMDVRNT 67

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDAD-TLSGFIEEGVARGKMTQTYESAEKC 127
             I  + + I   FG++DIL+NNA    I    D +++G+                    
Sbjct: 68  DDIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGW-----------------NSV 110

Query: 128 LQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
           +     G     +A+    ++      I+N+ +        T+ W               
Sbjct: 111 INIVLNGTFYCSQAIGKYWIEKGIKGNIINMVA--------TYAW--------------- 147

Query: 187 VDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKY---PNFCINCV 241
                                 P   ++AA   +KA + A T+ LA ++       +N +
Sbjct: 148 -------------------DAGPGVIHSAA---AKAGVLAMTKTLAVEWGRKYGIRVNAI 185

Query: 242 CPGYVKTEMTYN-----------------AGRL-TVEEGAESPVWLA 270
            PG ++     +                  GRL T EE A    +L 
Sbjct: 186 APGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLC 232

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  113 bits (286), Expect = 2e-30
 Identities = 53/248 (21%), Positives = 87/248 (35%), Gaps = 62/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + AVVTG+  GIG  +   LA  G  I +    D     +    L       V++   D+
Sbjct: 5   KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL 64

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +   A+  + D      G++DILVNNAGI   +   D                   E  +
Sbjct: 65  SKGEAVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDF----------------PTEKWD 108

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             L  N         A +P ++     RI+N++S+ G                       
Sbjct: 109 AILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG----------------------- 145

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                           S        N +AY+ +K  +  +T++ A +     I  N +CP
Sbjct: 146 -------------LVASA-------NKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185

Query: 244 GYVKTEMT 251
           G+V+T + 
Sbjct: 186 GWVRTPLV 193

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  113 bits (286), Expect = 3e-30
 Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 61/247 (24%)

Query: 9   AVVTGA--NKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
            VVTGA   KG+G E  R  A  G  + +  A   +G  E V++L+ +       ++  V
Sbjct: 23  VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQV 82

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
               +   +   + + FG++D  + NAG T     AD+             +  + E+  
Sbjct: 83  DSYESCEKLVKDVVADFGQIDAFIANAGAT-----ADSGI-----------LDGSVEAWN 126

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             +Q +  G     +A+    +   +  +V  +S                          
Sbjct: 127 HVVQVDLNGTFHCAKAVGHHFKERGTGSLVITAS-------------------------- 160

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF-CINCVCPG 244
               +     N           +P    +Y ++KA      R LA ++ +F  +N + PG
Sbjct: 161 ----MSGHIAN-----------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPG 205

Query: 245 YVKTEMT 251
           Y+ T ++
Sbjct: 206 YIDTGLS 212

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  113 bits (286), Expect = 4e-30
 Identities = 63/251 (25%), Positives = 94/251 (37%), Gaps = 66/251 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M+E+AK   +VTGA+ G G  +       G   + TAR      EA++ L  +  D    
Sbjct: 1   MSESAKV-WLVTGASSGFGRAIAEAAVAAGDTVIGTARR----TEALDDLVAAYPDRAEA 55

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             LDV D   I  VA  + + +G++D+LVNNAG         T  G  EE         T
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGR--------TQVGAFEET--------T 99

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
                   + +  G  R+  AL+P ++   S  +VN+SS  G+L                
Sbjct: 100 ERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQL---------------- 143

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN- 239
                                      +    +AY  +KAA+   +  LA +   F I  
Sbjct: 144 --------------------------SFAG-FSAYSATKAALEQLSEGLADEVAPFGIKV 176

Query: 240 -CVCPGYVKTE 249
             V PG  +T 
Sbjct: 177 LIVEPGAFRTN 187

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  114 bits (287), Expect = 4e-30
 Identities = 56/275 (20%), Positives = 88/275 (32%), Gaps = 68/275 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVI 59
           + + A R A VTG   G+G  +VRQL   G    +    +    +A+  L+  G    V+
Sbjct: 3   LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             QLDVA        AD + + FG + IL NNAG+         L   IEE         
Sbjct: 63  GVQLDVASREGFKMAADEVEARFGPVSILCNNAGV--------NLFQPIEE--------S 106

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLL------QLSDSARIVNVSSSLGKLMYVTHEWAK 173
           +Y+  +  L  N  G        +P +             +VN +S    L         
Sbjct: 107 SYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--------- 157

Query: 174 GVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY 233
                                       +        +   Y  +K A+   +  L    
Sbjct: 158 ---------------------------AAG-------SPGIYNTTKFAVRGLSESLHYSL 183

Query: 234 PNFCI--NCVCPGYVKTEMTYNAGRLTVEEGAESP 266
             + I  + +CPG VK+ +  +          E  
Sbjct: 184 LKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVK 218

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  113 bits (284), Expect = 7e-30
 Identities = 43/288 (14%), Positives = 82/288 (28%), Gaps = 74/288 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           AV+TG  + IG+ +  +L   G   V+     E      V +L  +   + +  + D++ 
Sbjct: 14  AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 73

Query: 68  PAAIHSVA----DFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
            +++        D     FG+ D+LVNNA          T     ++             
Sbjct: 74  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY-----YPTPLLPGDDTNGAADAKPIDAQ 128

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSD-----SARIVNVSSSLGKLMYVTHEWAKGVFSD 178
             +   +N +    +  A              +  +VN+  ++  L              
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDL-------------- 174

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                         P     Y ++K A+   TR  A +     I
Sbjct: 175 ----------------------------PLP-GFCVYTMAKHALGGLTRAAALELAPRHI 205

Query: 239 --NCVCPGYVKTEMTYN------------AGRL--TVEEGAESPVWLA 270
             N V PG                      G+   +  + A++  +L 
Sbjct: 206 RVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLV 253

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  112 bits (282), Expect = 9e-30
 Identities = 54/266 (20%), Positives = 89/266 (33%), Gaps = 63/266 (23%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           K+ A+VTGA +GIG  +  +L  +G    +   ++        ++  +G    +  ++DV
Sbjct: 2   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGH-AVAVKVDV 60

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D   + +  +  R   G  D++VNNAG+        T              + T E  +
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVA-----PSTPI-----------ESITPEIVD 104

Query: 126 KCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           K    N  G     +A +    +     +I+N  S  G                      
Sbjct: 105 KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG---------------------- 142

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                           G+P         A Y  SK A+   T+  A+      I  N  C
Sbjct: 143 --------------HVGNP-------ELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 243 PGYVKTEMTYNAGRLTVEEGAESPVW 268
           PG VKT M     R   E   +   +
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGY 207

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  112 bits (282), Expect = 9e-30
 Identities = 48/284 (16%), Positives = 84/284 (29%), Gaps = 79/284 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG+++GIG    R  A  G    L  R     ++       +   +  F   D+A  
Sbjct: 10  VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATS 69

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A   + D   + FG +D+L+NNAG   +                  ++       +  +
Sbjct: 70  EACQQLVDEFVAKFGGIDVLINNAGG--LVGRKPLP-----------EIDD--TFYDAVM 114

Query: 129 QTNYLGAKRMCEALIPLL-----QLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
             N        +  +P L         ++ +++  S  G                     
Sbjct: 115 DANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG--------------------- 153

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                                T G P  A  Y  +KA ++   +     +       N V
Sbjct: 154 --------------------HTGGGP-GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIV 192

Query: 242 CPGYVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
            PG V T    +               GR  T EE A + ++ A
Sbjct: 193 SPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFA 236

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  112 bits (282), Expect = 1e-29
 Identities = 57/288 (19%), Positives = 93/288 (32%), Gaps = 78/288 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVI 59
           +     R  VV GA + IG     + A  G   VLT     +G   AV +++  G  + +
Sbjct: 3   LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG-RSAL 61

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             + D+ + A + +        FG++  LV+ AG   + +                +M +
Sbjct: 62  AIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGG--LIARKTIA-----------EMDE 108

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
                 + L  N        +  +P  +++    IV  SS  G+                
Sbjct: 109 --AFWHQVLDVNLTSLFLTAKTALP--KMAKGGAIVTFSSQAGRD--------------- 149

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI 238
                                      G    A AY  SK A+  +TR LAK+  P   +
Sbjct: 150 ---------------------------GGGPGALAYATSKGAVMTFTRGLAKEVGPKIRV 182

Query: 239 NCVCPGYVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
           N VCPG + T                      R  + E+ A    +LA
Sbjct: 183 NAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLA 230

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  111 bits (280), Expect = 1e-29
 Identities = 55/247 (22%), Positives = 87/247 (35%), Gaps = 64/247 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AV+TG   GIG  +  + A+ G    +         EA   +++ G   V+  + DV+
Sbjct: 8   KLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRR-VLTVKCDVS 64

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
            P  + +    + S FG+ DILVNNAGI                         T+E  +K
Sbjct: 65  QPGDVEAFGKQVISTFGRCDILVNNAGIY-----PLIPF-----------DELTFEQWKK 108

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N      M +A +P ++ +   RI+N++S+   L                      
Sbjct: 109 TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL---------------------- 146

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                       YI +KAA   +TR LA       I  N + P 
Sbjct: 147 --------------KIE-------AYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 185

Query: 245 YVKTEMT 251
            V+T  T
Sbjct: 186 LVRTATT 192

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  111 bits (280), Expect = 1e-29
 Identities = 49/280 (17%), Positives = 85/280 (30%), Gaps = 75/280 (26%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNG-------IITVLTARDEKGGLEAVEKLKHSGFDNV 58
           K   ++TGA KGIG  +  + A           + VL++R      +   + +  G    
Sbjct: 2   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALT 60

Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
                D++D A +  +   I   +G +D LVNNAG+                 ++     
Sbjct: 61  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVG-----RFGA-------LSDLTE- 107

Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
              E  +  + TN  G   + +AL  L++   S  I  ++S                   
Sbjct: 108 ---EDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT--------------- 149

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                      K +  +++ Y +SK         +        +
Sbjct: 150 ---------------------------KAFR-HSSIYCMSKFGQRGLVETMRLYARKCNV 181

Query: 239 --NCVCPGYVKTEMT------YNAGRLTVEEGAESPVWLA 270
               V PG V T M         A  +  E+ A   V   
Sbjct: 182 RITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAY 221

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  111 bits (280), Expect = 1e-29
 Identities = 59/247 (23%), Positives = 96/247 (38%), Gaps = 66/247 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA++GIG+EV   LA  G   V TA  +    +    +K  G        L+++D 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-FKARGLVLNISDI 66

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            +I +    I++    +DILVNNAGIT      D L            M  + +  +  +
Sbjct: 67  ESIQNFFAEIKAENLAIDILVNNAGIT-----RDNLM-----------MRMSEDEWQSVI 110

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
            TN     RM +  +  +      RI+++ S +G                          
Sbjct: 111 NTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVG-------------------------- 144

Query: 189 EVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                           + G P   N  A   +KA +  +++ LA +    N  +N V PG
Sbjct: 145 ----------------SAGNPGQTNYCA---AKAGVIGFSKSLAYEVASRNITVNVVAPG 185

Query: 245 YVKTEMT 251
           ++ T+MT
Sbjct: 186 FIATDMT 192

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  111 bits (281), Expect = 1e-29
 Identities = 38/264 (14%), Positives = 74/264 (28%), Gaps = 65/264 (24%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           + AVVT  + G+G+    +LA NG   +L +R+ +    A  ++        V     D+
Sbjct: 8   KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDI 67

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT-QTYESA 124
            +P  I  + +  R   G  DILV + G            G   E      +  + ++ +
Sbjct: 68  REPGDIDRLFEKAR-DLGGADILVYSTGGPR--------PGRFME------LGVEDWDES 112

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
               +     A  +       +      R+V + S                         
Sbjct: 113 ---YRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL---------------------- 147

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                     + A   + +  +    R LA +     +  N V 
Sbjct: 148 --------------LRPWQ-------DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVL 186

Query: 243 PGYVKTEMTYNAGRLTVEEGAESP 266
           P  + T+   +           + 
Sbjct: 187 PSLILTDRVRSLAEERARRSGITV 210

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  111 bits (281), Expect = 1e-29
 Identities = 61/289 (21%), Positives = 94/289 (32%), Gaps = 87/289 (30%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M   + +  +VTGA  GIG   +   A  G   V   R+E+   EAV  L+       I 
Sbjct: 1   MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIA 56

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              DV+DP A+ +V       FG+L  + + AG+         LS               
Sbjct: 57  VVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-----SALS-----------WNLP 100

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E+ EK L+ N  G+  +      +L+  +   +V   S  G                  
Sbjct: 101 LEAWEKVLRVNLTGSFLVARKAGEVLE--EGGSLVLTGSVAG------------------ 140

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                     G    A+ AA    K  +    R LA +     +
Sbjct: 141 -------------------------LGAFGLAHYAA---GKLGVVGLARTLALELARKGV 172

Query: 239 --NCVCPGYVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
             N + PG ++T MT                 GR    EE A++ ++L 
Sbjct: 173 RVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLL 221

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  111 bits (279), Expect = 3e-29
 Identities = 56/251 (22%), Positives = 84/251 (33%), Gaps = 75/251 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVAD 67
           A+VTGA +GIG      L L G    L   + + G++    L         +F Q DVAD
Sbjct: 10  ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD 69

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              +      +  HFG+LDILVNNAG+    ++ +    +                 EK 
Sbjct: 70  QQQLRDTFRKVVDHFGRLDILVNNAGVN---NEKN----W-----------------EKT 105

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSAR---IVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           LQ N +         +  +   +      I+N+SS  G +                    
Sbjct: 106 LQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM-------------------- 145

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR--ILAKKYPNFCI--NC 240
                                         Y  SK  +  +TR   LA    N  +  N 
Sbjct: 146 ----------------PVA-------QQPVYCASKHGIVGFTRSAALAANLMNSGVRLNA 182

Query: 241 VCPGYVKTEMT 251
           +CPG+V T + 
Sbjct: 183 ICPGFVNTAIL 193

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  110 bits (278), Expect = 3e-29
 Identities = 52/265 (19%), Positives = 103/265 (38%), Gaps = 73/265 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTGA++GIG  + ++LA +G +  +     ++   E V +++ +G         ++  
Sbjct: 10  ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI-GANLES 68

Query: 68  PAAIHSVADFIRSHF------GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
              + ++   + +         K DIL+NNAGI   +   +T                T 
Sbjct: 69  LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEET----------------TE 112

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           +  ++ +  N      + +  +  L+  D++RI+N+SS+  ++                 
Sbjct: 113 QFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISL--------------- 155

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCIN 239
                                        +  AY ++K A+N  T  LAK+       +N
Sbjct: 156 ----------------------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVN 187

Query: 240 CVCPGYVKTEMTYNAGRLTVEEGAE 264
            + PG+VKT+M  NA  L+     +
Sbjct: 188 AILPGFVKTDM--NAELLSDPMMKQ 210

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  110 bits (278), Expect = 3e-29
 Identities = 63/283 (22%), Positives = 94/283 (33%), Gaps = 80/283 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
             A VTGA  GIG E+ R  A +G   +L  R+      A ++L  +    +     DV 
Sbjct: 12  ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARI---VADVT 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A+ + A         + ILVN+AGI     DA               +     +  +
Sbjct: 69  DAEAMTAAAAEA-EAVAPVSILVNSAGIA-RLHDA---------------LETDDATWRQ 111

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  G      A    +    +  IVN+ S  G                        
Sbjct: 112 VMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSG------------------------ 147

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                                 P  A++Y+ SK A++  TR LA ++      +N + PG
Sbjct: 148 -----------------TIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPG 190

Query: 245 YVKTEMTYN----------------AGRL-TVEEGAESPVWLA 270
           YV TEMT                   GR     E A + ++LA
Sbjct: 191 YVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLA 233

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  111 bits (279), Expect = 3e-29
 Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 66/247 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA++GIG  +  +LA  G + + TA  E G        K +G        L+V D 
Sbjct: 31  AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-LEGRGAVLNVNDA 89

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A+ ++ +     FG L++LVNNAGIT      D L+           M    +  +  +
Sbjct: 90  TAVDALVESTLKEFGALNVLVNNAGIT-----QDQLA-----------MRMKDDEWDAVI 133

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
            TN     R+  A++  +  +   RIVN++S +G                          
Sbjct: 134 DTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG-------------------------- 167

Query: 189 EVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                           + G P   N AA   +KA +   TR LA++       +NCV PG
Sbjct: 168 ----------------SAGNPGQVNYAA---AKAGVAGMTRALAREIGSRGITVNCVAPG 208

Query: 245 YVKTEMT 251
           ++ T+MT
Sbjct: 209 FIDTDMT 215

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  111 bits (279), Expect = 4e-29
 Identities = 59/255 (23%), Positives = 99/255 (38%), Gaps = 66/255 (25%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 + A+VTGA +GIG E+ + LA +    +  +R +K     V+++K  G      
Sbjct: 39  YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSG 97

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           +  DV+    I  V + I +    +DILVNNAGIT      D L            +   
Sbjct: 98  YAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT-----RDNLF-----------LRMK 141

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            +  E  L+TN      + + +   +  +   RI+N+SS +G                  
Sbjct: 142 NDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG------------------ 183

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NF 236
                                     G    AN ++   SKA +  +T+ LAK+    N 
Sbjct: 184 ------------------------LTGNVGQANYSS---SKAGVIGFTKSLAKELASRNI 216

Query: 237 CINCVCPGYVKTEMT 251
            +N + PG++ ++MT
Sbjct: 217 TVNAIAPGFISSDMT 231

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  110 bits (277), Expect = 4e-29
 Identities = 52/247 (21%), Positives = 94/247 (38%), Gaps = 65/247 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           ++VTG+ +GIG  +  +LA  G   ++T    +      E++ +         ++++   
Sbjct: 10  SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSE 69

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            +I+   + I +    +DILVNNAGIT      D L            +  +    E+ L
Sbjct: 70  ESINKAFEEIYNLVDGIDILVNNAGIT-----RDKLF-----------LRMSLLDWEEVL 113

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N  G   + +  +  +      RIVN+SS +G                          
Sbjct: 114 KVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVG-------------------------- 147

Query: 189 EVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                             G     N +    +KA +  +T+ LAK+    N  +N V PG
Sbjct: 148 ----------------FTGNVGQVNYST---TKAGLIGFTKSLAKELAPRNVLVNAVAPG 188

Query: 245 YVKTEMT 251
           +++T+MT
Sbjct: 189 FIETDMT 195

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  109 bits (275), Expect = 7e-29
 Identities = 44/247 (17%), Positives = 67/247 (27%), Gaps = 72/247 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +   VTGA KGIGY         G       +                        +DVA
Sbjct: 8   KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFA-----------TEVMDVA 56

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A +  V   + +   +LD LVN AGI          +              + E  ++
Sbjct: 57  DAAQVAQVCQRLLAETERLDALVNAAGIL-----RMGAT-----------DQLSKEDWQQ 100

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N  GA  + +  +   +      IV V+S                           
Sbjct: 101 TFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHT---------------------- 138

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                     +AY  SKAA+ +    +  +     +  N V PG
Sbjct: 139 --------------PRI-------GMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPG 177

Query: 245 YVKTEMT 251
              T+M 
Sbjct: 178 STDTDMQ 184

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  109 bits (274), Expect = 1e-28
 Identities = 62/248 (25%), Positives = 97/248 (39%), Gaps = 66/248 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A++TGA++GIG  +  +LA +G  + +   ++ +   E  E+ +  G   V     ++ +
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
             A  ++        G LD LVNNAGIT      DTL            +    E  E  
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGIT-----RDTLL-----------VRMKDEDWEAV 107

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           L+ N     R     + L+  +   RIVN++S +G                         
Sbjct: 108 LEANLSAVFRTTREAVKLMMKARFGRIVNITSVVG------------------------- 142

Query: 188 DEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                              G P  AN  A   SKA +  +TR +AK+Y      +N V P
Sbjct: 143 -----------------ILGNPGQANYVA---SKAGLIGFTRAVAKEYAQRGITVNAVAP 182

Query: 244 GYVKTEMT 251
           G+++TEMT
Sbjct: 183 GFIETEMT 190

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  109 bits (274), Expect = 1e-28
 Identities = 32/255 (12%), Positives = 68/255 (26%), Gaps = 65/255 (25%)

Query: 1   MAET-AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVI 59
           M+ T       V GA   IG E+ ++ A  G       R+ +     V +++ +G   ++
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIV 59

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
              LD  +   + +  +   +    L++ + N G        +T                
Sbjct: 60  ARSLDARNEDEVTAFLNAADA-HAPLEVTIFNVGANVNFPILET---------------- 102

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
           T     K  +               L+      +I    ++                   
Sbjct: 103 TDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS----------------- 145

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI- 238
                                     +G     AA+  +K  + A  + +A++     I 
Sbjct: 146 -------------------------LRGGS-GFAAFASAKFGLRAVAQSMARELMPKNIH 179

Query: 239 --NCVCPGYVKTEMT 251
             + +    V T   
Sbjct: 180 VAHLIIDSGVDTAWV 194

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  109 bits (274), Expect = 1e-28
 Identities = 49/272 (18%), Positives = 80/272 (29%), Gaps = 66/272 (24%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     + A++TG+ +GIG          G    +   D +   +A  ++          
Sbjct: 3   MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP----AAYA 58

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            Q+DV    +I +       H G LDILVNNA +  ++   +                 T
Sbjct: 59  VQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEI----------------T 102

Query: 121 YESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
            ES EK    N  G     +A    ++      +I+N++S  G                 
Sbjct: 103 RESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAG----------------- 145

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC 237
                              + G           A Y  +KAA+ + T+            
Sbjct: 146 -------------------RRGEA-------LVAIYCATKAAVISLTQSAGLDLIKHRIN 179

Query: 238 INCVCPGYVKTEMTYNAGRLTVEEGAESPVWL 269
           +N + PG V  E       L            
Sbjct: 180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEK 211

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  109 bits (274), Expect = 1e-28
 Identities = 48/251 (19%), Positives = 90/251 (35%), Gaps = 65/251 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R+A++T   KG+G +V  +L   G    +T   +   +E +++      + + F Q DV 
Sbjct: 8   RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVT 67

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAG--ITGISSDADTLSGFIEEGVARGKMTQTYESA 124
               +H + +   SHFGK+D L+NNAG  +             +          +  +  
Sbjct: 68  KKEDLHKIVEEAMSHFGKIDFLINNAGPYVF-----ERKK--LV-------DYEE--DEW 111

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            + +Q N      + + ++P+++  +  RI+N               A            
Sbjct: 112 NEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQ----------GADSA--------- 152

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINC 240
                                 GW   +  AA   +K  + + T+ +A +        N 
Sbjct: 153 ---------------------PGWIYRSAFAA---AKVGLVSLTKTVAYEEAEYGITANM 188

Query: 241 VCPGYVKTEMT 251
           VCPG +  EM 
Sbjct: 189 VCPGDIIGEMK 199

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  108 bits (273), Expect = 2e-28
 Identities = 30/247 (12%), Positives = 67/247 (27%), Gaps = 67/247 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
             A+VT      G     +L+  G          K   + +E    +        QL   
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ-KDELEAFAETYP------QLKPM 54

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
                  + + + S +G++D+LV+N        +   +                 E    
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIFA---PEFQPI------------DKYAVEDYRG 99

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++   +    +  A+   ++   S  I+ ++S+                          
Sbjct: 100 AVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFG---------------------- 137

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                                W    + Y  ++A        L+K+    N  +  + P 
Sbjct: 138 --------------------PWK-ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 176

Query: 245 YVKTEMT 251
           Y+ +E +
Sbjct: 177 YLHSEDS 183

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  107 bits (271), Expect = 3e-28
 Identities = 58/249 (23%), Positives = 87/249 (34%), Gaps = 72/249 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA  GIG   +   A  G   V    +E    EA E +            +DVA
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV------VMDVA 59

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DPA++        +H G+LD +V+ AGIT      D             KM    E  E 
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGIT-----RDNF--HW-------KMPL--EDWEL 103

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+ N  G+  + +A    ++  +   IV  +S +                         
Sbjct: 104 VLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY------------------------ 139

Query: 187 VDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                               G    AN AA   S A +   TR LA +   + I  N + 
Sbjct: 140 -------------------LGNLGQANYAA---SMAGVVGLTRTLALELGRWGIRVNTLA 177

Query: 243 PGYVKTEMT 251
           PG+++T MT
Sbjct: 178 PGFIETRMT 186

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  109 bits (274), Expect = 3e-28
 Identities = 51/286 (17%), Positives = 89/286 (31%), Gaps = 86/286 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A +TG   G+G  +   L+  G   V+ +R         E++     + V   Q DV DP
Sbjct: 29  AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDP 88

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLS--GFIEEGVARGKMTQTYESAEK 126
             + +    +    G  +I++NNA    I S  + LS   +                 + 
Sbjct: 89  DMVQNTVSELIKVAGHPNIVINNAAGNFI-SPTERLSPNAW-----------------KT 130

Query: 127 CLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
                  G   +   +   L++    A  +++++   +                      
Sbjct: 131 ITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET--------------------- 169

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KYPNFCINCVC 242
                          GS               +KA + A ++ LA    KY     N + 
Sbjct: 170 ---------------GSG-------FVVPSASAKAGVEAMSKSLAAEWGKY-GMRFNVIQ 206

Query: 243 PGYVKTEMTYN-----------------AGRL-TVEEGAESPVWLA 270
           PG +KT+  ++                  GRL TVEE A    +L 
Sbjct: 207 PGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC 252

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  108 bits (273), Expect = 5e-28
 Identities = 52/265 (19%), Positives = 89/265 (33%), Gaps = 70/265 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDN----VIFHQLD 64
           A+VTG   GIG  +V++L   G   V+ +R  +    A ++L+ +        VI  Q +
Sbjct: 21  AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCN 80

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDAD-TLSGFIEEGVARGKMTQTYES 123
           + +   ++++       FGK++ LVNN G   +S     +  G+                
Sbjct: 81  IRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGW---------------- 124

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
               L+TN  G   MC+A+           IVN+                          
Sbjct: 125 -HAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV------------------------ 159

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KYPNFCINC 240
                          K G P       ++ A   ++A +   T+ LA          INC
Sbjct: 160 -------------PTKAGFPLA----VHSGA---ARAGVYNLTKSLALEWACS-GIRINC 198

Query: 241 VCPGYVKTEMTYNAGRLTVEEGAES 265
           V PG + ++          +   E 
Sbjct: 199 VAPGVIYSQTAVENYGSWGQSFFEG 223

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  106 bits (266), Expect = 5e-28
 Identities = 49/273 (17%), Positives = 80/273 (29%), Gaps = 83/273 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TGA  G+G    R L   G   +L+ R       A+ +L        +    D+AD 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRA----GALAELAREVGARAL--PADLADE 54

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
               ++ +      G LD+LV+  G  G +S  +                   +  E+ L
Sbjct: 55  LEAKALLE----EAGPLDLLVHAVGKAGRASVREA----------------GRDLVEEML 94

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             + L A      ++   +    AR V   +    +                        
Sbjct: 95  AAHLLTAA----FVLKHARFQKGARAVFFGAYPRYV------------------------ 126

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                         P         AAY  +K A+ AY     K+     +    V    V
Sbjct: 127 ------------QVP-------GFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAV 167

Query: 247 KTEMT-----YNAGRLTVEEGAESPVWLALLHK 274
            T +         G L+ EE A   V   L  +
Sbjct: 168 ATGLWAPLGGPPKGALSPEEAARK-VLEGLFRE 199

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  107 bits (269), Expect = 5e-28
 Identities = 56/248 (22%), Positives = 95/248 (38%), Gaps = 67/248 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
            VVTGA++GIG  +   L   G  + V  AR  K   E  ++++  G    I    DV+ 
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSK 62

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
            A + ++       +G +D++VNNAGIT      DTL            +       ++ 
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGIT-----RDTLL-----------IRMKKSQWDEV 106

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  N  G     +A   ++      RI+N++S +G                         
Sbjct: 107 IDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG------------------------- 141

Query: 188 DEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                              G    AN AA   +KA +  +++  A++    N  +N VCP
Sbjct: 142 -----------------LIGNIGQANYAA---AKAGVIGFSKTAAREGASRNINVNVVCP 181

Query: 244 GYVKTEMT 251
           G++ ++MT
Sbjct: 182 GFIASDMT 189

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  107 bits (269), Expect = 6e-28
 Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 67/248 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTG+++G+G  +  +L   G   VL  +          E+ K +G  NV+  + DV +
Sbjct: 8   AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKN 66

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           P  + ++       FG++DILVNNAGIT      DTL       + +  M++  +  +  
Sbjct: 67  PEDVENMVKTAMDAFGRIDILVNNAGIT-----RDTL-------MLK--MSE--KDWDDV 110

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           L TN   A    +A+  ++    S +I+N++S  G                         
Sbjct: 111 LNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAG------------------------- 145

Query: 188 DEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                              G    AN AA   SKA +  +T+ +AK++       N V P
Sbjct: 146 -----------------IIGNAGQANYAA---SKAGLIGFTKSIAKEFAAKGIYCNAVAP 185

Query: 244 GYVKTEMT 251
           G +KT+MT
Sbjct: 186 GIIKTDMT 193

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  107 bits (270), Expect = 6e-28
 Identities = 44/282 (15%), Positives = 85/282 (30%), Gaps = 74/282 (26%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-------LEAVEKLKHSGFDN 57
           + +   +TGA++GIG  +  + A +G    + A+              A   +  +G   
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ- 63

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
            +  + D+ +   + +        FG +DILVNNA    +    DT              
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDT-------------- 109

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
               +  +   Q N  G+    +A +P L  + +  I+ ++                   
Sbjct: 110 --PMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS--------------- 152

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC 237
                                         W      Y L+K  M+  T  LA ++    
Sbjct: 153 --------------------------LNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQG 186

Query: 238 I--NCVCPG-YVKTEMTYN-----AGRL-TVEEGAESPVWLA 270
           +  N + P   + T+         A      E  A++   + 
Sbjct: 187 VAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAVL 228

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  107 bits (269), Expect = 7e-28
 Identities = 44/248 (17%), Positives = 73/248 (29%), Gaps = 57/248 (22%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  VVTGA++GIG  +  QL   G    +T R         ++ +  G    +    D +
Sbjct: 6   QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQ-CVPVVCDSS 64

Query: 67  DPAAIHSVADFI-RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
             + + S+ + + R   G+LD+LVNNA     +        F E               +
Sbjct: 65  QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWE---------TPASMWD 115

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
                   G          L+  +    IV +SS                          
Sbjct: 116 DINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGS----------------------- 152

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                                 +  N   Y + KAA +      A +          + P
Sbjct: 153 --------------------LQYMFN-VPYGVGKAACDKLAADCAHELRRHGVSCVSLWP 191

Query: 244 GYVKTEMT 251
           G V+TE+ 
Sbjct: 192 GIVQTELL 199

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  106 bits (268), Expect = 7e-28
 Identities = 46/250 (18%), Positives = 89/250 (35%), Gaps = 70/250 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG  +  +LA +G   +++  + +G   A   +             D++
Sbjct: 7   KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKA----RAIAADIS 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DP ++ ++   I++  G +DILVNNA I            +         +    +   K
Sbjct: 63  DPGSVKALFAEIQALTGGIDILVNNASIV-----PFVA--WD-------DVDL--DHWRK 106

Query: 127 CLQTNYLGAKRMCEALIPL-LQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
            +  N  G   +  A          + R+++++S+             G           
Sbjct: 107 IIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTF---------FAG----------- 146

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANA--AAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                                        AAY+ +K  +  +TR LA +   + I  N V
Sbjct: 147 -------------------------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAV 181

Query: 242 CPGYVKTEMT 251
            PG ++++  
Sbjct: 182 TPGLIESDGV 191

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  106 bits (268), Expect = 8e-28
 Identities = 67/255 (26%), Positives = 100/255 (39%), Gaps = 69/255 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 + A+VTGA++GIG  +   LA  G   + TA  E G     + L     DN   
Sbjct: 4   FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----DNGKG 59

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             L+V +P +I +V   I   FG +DILVNNAGIT      D L            M   
Sbjct: 60  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGIT-----RDNLL-----------MRMK 103

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E     ++TN     R+ +A++  +      RI+NV S +G                  
Sbjct: 104 EEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVG------------------ 145

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NF 236
                                   T G    AN AA   +KA +  +T+ +A++      
Sbjct: 146 ------------------------TMGNAGQANYAA---AKAGVIGFTKSMAREVASRGV 178

Query: 237 CINCVCPGYVKTEMT 251
            +N V PG+++T+MT
Sbjct: 179 TVNTVAPGFIETDMT 193

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  107 bits (269), Expect = 8e-28
 Identities = 66/287 (22%), Positives = 104/287 (36%), Gaps = 79/287 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVI 59
                 R A+VTGA++GIG  +  +LA  G  + V  A       E V  +  +G     
Sbjct: 23  ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG-GEAF 81

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             + DV+  + + ++   +   +G+LD+LVNNAGIT      DTL            +  
Sbjct: 82  AVKADVSQESEVEALFAAVIERWGRLDVLVNNAGIT-----RDTLL-----------LRM 125

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             +  +  L  N  G      A   ++    S RI+N++S +G                 
Sbjct: 126 KRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVG----------------- 168

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--N 235
                                      G P  AN +A   +KA +   T+ +AK+     
Sbjct: 169 -------------------------EMGNPGQANYSA---AKAGVIGLTKTVAKELASRG 200

Query: 236 FCINCVCPGYVKTEMTYN-----------AGRL-TVEEGAESPVWLA 270
             +N V PG++ T+MT              GR     E A    +LA
Sbjct: 201 ITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLA 247

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  107 bits (269), Expect = 9e-28
 Identities = 55/283 (19%), Positives = 92/283 (32%), Gaps = 81/283 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A +TG   GIG+ +      +G  TV+ +R     L A  KL  +     +   +DV  P
Sbjct: 30  AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAP 89

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDAD-TLSGFIEEGVARGKMTQTYESAEKC 127
            A+ +  D     FG++DIL+N A    +      + + F                 +  
Sbjct: 90  PAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAF-----------------KTV 132

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           +  +  G   +   L           IVN++++LG                         
Sbjct: 133 MDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNR----------------------- 169

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGY 245
                        G         +A +   +KAA++A TR LA ++   N  +N + PG 
Sbjct: 170 -------------GQALQ----VHAGS---AKAAVDAMTRHLAVEWGPQNIRVNSLAPGP 209

Query: 246 VKTEMTYN-----------------AGRL-TVEEGAESPVWLA 270
           +                          RL    E A S ++LA
Sbjct: 210 ISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLA 252

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  106 bits (267), Expect = 9e-28
 Identities = 64/250 (25%), Positives = 101/250 (40%), Gaps = 67/250 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           + A+VTGA++GIG  +   LA  G  + V  A +E+   E V+++K  G  + I  + DV
Sbjct: 5   KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-SDAIAVRADV 63

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           A+   + ++       FG++DILVNNAG+T      D L            M    E  +
Sbjct: 64  ANAEDVTNMVKQTVDVFGQVDILVNNAGVT-----KDNLL-----------MRMKEEEWD 107

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN  G     +A+   +      RIVN++S +G                       
Sbjct: 108 TVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVG----------------------- 144

Query: 186 RVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                                G P  AN  A   +KA +   T+  AK+    N  +N +
Sbjct: 145 -------------------VTGNPGQANYVA---AKAGVIGLTKTSAKELASRNITVNAI 182

Query: 242 CPGYVKTEMT 251
            PG++ T+MT
Sbjct: 183 APGFIATDMT 192

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  107 bits (269), Expect = 9e-28
 Identities = 62/285 (21%), Positives = 104/285 (36%), Gaps = 81/285 (28%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           KR A VTG   G+G  + R+L   G+   ++  +    +      +     +   + +DV
Sbjct: 25  KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDV 84

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           AD  +    A+ + + FGK+D+L+NNAGIT      D    F+       KMT+     +
Sbjct: 85  ADFESCERCAEKVLADFGKVDVLINNAGIT-----RDAT--FM-------KMTK--GDWD 128

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             ++T+      + +  I  +      RIVN+ S  G                       
Sbjct: 129 AVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG----------------------- 165

Query: 186 RVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                              ++G    AN A+   +KA ++ +T+ LA +       +N V
Sbjct: 166 -------------------SRGAFGQANYAS---AKAGIHGFTKTLALETAKRGITVNTV 203

Query: 242 CPGYVKTEMTYN---------------AGRL-TVEEGAESPVWLA 270
            PGY+ T M                   GRL   +E A    +L 
Sbjct: 204 SPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLC 248

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  106 bits (268), Expect = 1e-27
 Identities = 59/255 (23%), Positives = 91/255 (35%), Gaps = 69/255 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   R A+VTGA  GIG  + R     G I  L    E    E    L      +V  
Sbjct: 22  MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG----KDVFV 77

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              +++D  +I  +A+        +DILVNNAGIT      D L            +   
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT-----RDGLF-----------VRMQ 121

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            +  +  L  N   A  +   LI  +      RI+N++S +G                  
Sbjct: 122 DQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVG------------------ 163

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NF 236
                                     G P   N  A   +KA +  +++ LA++    N 
Sbjct: 164 ------------------------VVGNPGQTNYCA---AKAGLIGFSKALAQEIASRNI 196

Query: 237 CINCVCPGYVKTEMT 251
            +NC+ PG++K+ MT
Sbjct: 197 TVNCIAPGFIKSAMT 211

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  106 bits (267), Expect = 1e-27
 Identities = 63/248 (25%), Positives = 97/248 (39%), Gaps = 67/248 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           A+VTGA++GIG  +  QLA  G  + V  A  ++     VE++K  G  +    Q +VAD
Sbjct: 7   ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-VDSFAIQANVAD 65

Query: 68  PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
              + ++   + S FG LD+LVNNAGIT      D L            M    +  +  
Sbjct: 66  ADEVKAMIKEVVSQFGSLDVLVNNAGIT-----RDNLL-----------MRMKEQEWDDV 109

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           + TN  G     +   P +    S  I+N+SS +G                         
Sbjct: 110 IDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG------------------------- 144

Query: 188 DEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                              G P  AN  A   +KA +   T+  A++       +N V P
Sbjct: 145 -----------------AVGNPGQANYVA---TKAGVIGLTKSAARELASRGITVNAVAP 184

Query: 244 GYVKTEMT 251
           G++ ++MT
Sbjct: 185 GFIVSDMT 192

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  105 bits (265), Expect = 2e-27
 Identities = 53/272 (19%), Positives = 90/272 (33%), Gaps = 67/272 (24%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
            + AV+TGA++GIG  + R LA +G    L AR      +   +L       V +H LDV
Sbjct: 2   MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV 61

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +   ++   +  +   FG +D++V NAG+                 +         E   
Sbjct: 62  SKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR------------LEELSE----EEFH 105

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + ++ N LG  R  +A +  L+ +    +V  S             +  +          
Sbjct: 106 EMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSD-----------VSARLI--------- 145

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY 245
                                        Y+ +K A  A  R    + P+     + PG 
Sbjct: 146 ------------------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGA 181

Query: 246 VKTEMTYN-------AGRLTVEEGAESPVWLA 270
           V T    +        G L  +E AE+   L 
Sbjct: 182 VDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLL 213

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  105 bits (265), Expect = 3e-27
 Identities = 65/285 (22%), Positives = 105/285 (36%), Gaps = 82/285 (28%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           +R A VTG   GIG  + ++L  +G   V     +    ++ +E  K  GFD     + +
Sbjct: 13  QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYAS-EGN 71

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V D  +     D +++  G++D+LVNNAGIT      D +  F        KMT+  E  
Sbjct: 72  VGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT-----RDVV--FR-------KMTR--EDW 115

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  + TN      + + +I  +      RI+N+SS  G                      
Sbjct: 116 QAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG---------------------- 153

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NFCINC 240
                                KG     N +    +KA ++ +T  LA++       +N 
Sbjct: 154 --------------------QKGQFGQTNYST---AKAGIHGFTMSLAQEVATKGVTVNT 190

Query: 241 VCPGYVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
           V PGY+ T+M                   RL + +E      WLA
Sbjct: 191 VSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLA 235

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  104 bits (263), Expect = 3e-27
 Identities = 59/274 (21%), Positives = 85/274 (31%), Gaps = 70/274 (25%)

Query: 3   ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           E  K   ++TGA++GIG    R L   G    L ARDE    + ++ L  +  +  +   
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALA-AELEGALPLP 56

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            DV +          +   FG+L  LVNNAG+  +              V    +    E
Sbjct: 57  GDVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKP------------VHELTL----E 100

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
                L TN  GA       +P L       IVNV S  GK  +                
Sbjct: 101 EWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF---------------- 144

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NC 240
                                         AAY  SK  +               +    
Sbjct: 145 ---------------------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVN 177

Query: 241 VCPGYVKTEMTYN----AGRLTVEEGAESPVWLA 270
           V PG V T    N    A +L  E+ A++ ++  
Sbjct: 178 VLPGSVDTGFAGNTPGQAWKLKPEDVAQAVLFAL 211

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  105 bits (265), Expect = 3e-27
 Identities = 52/250 (20%), Positives = 84/250 (33%), Gaps = 65/250 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLT--ARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           + A+VTG  +GIG  +  +LA +G    +    + E+   E ++ ++ +     +F  LD
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK-AVFVGLD 61

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V D A   S  D      G  D+LVNNAGI         L           ++T+  E  
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIA---QIKPLL-----------EVTE--EDL 105

Query: 125 EKCLQTNYLGAKRMC-EALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
           ++    N          A     +L    +I+N +S                        
Sbjct: 106 KQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAA--------------------- 144

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                           +G P         +AY  +K A+   T+  A++        N  
Sbjct: 145 ---------------IQGFP-------ILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAY 182

Query: 242 CPGYVKTEMT 251
            PG V T M 
Sbjct: 183 APGIVGTGMW 192

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  104 bits (262), Expect = 5e-27
 Identities = 47/249 (18%), Positives = 79/249 (31%), Gaps = 73/249 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTGA KGIG   V+ L   G   V  +R +      V +        +    +D+ 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLG 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A            G +D+LVNNA +  +    +                 T E+ ++
Sbjct: 63  DWEATERALG----SVGPVDLLVNNAAVALLQPFLEV----------------TKEAFDR 102

Query: 127 CLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + N     ++ + +   L+       IVNVSS   +                      
Sbjct: 103 SFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--------------------- 141

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KYPNFCINCVC 242
                                    N + Y  +K A++  T+++A     +    +N V 
Sbjct: 142 ---------------AVT-------NHSVYCSTKGALDMLTKVMALELGPH-KIRVNAVN 178

Query: 243 PGYVKTEMT 251
           P  V T M 
Sbjct: 179 PTVVMTSMG 187

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  104 bits (262), Expect = 6e-27
 Identities = 43/245 (17%), Positives = 76/245 (31%), Gaps = 70/245 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AVVTGA  G+G E+V+ L+ + I+     R+     E +  L       V   + D+   
Sbjct: 8   AVVTGATGGMGIEIVKDLSRDHIV-YALGRNP----EHLAALAEIE--GVEPIESDIVKE 60

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                  D ++ +   +D LV+ A +   ++            +  G +          L
Sbjct: 61  VLEEGGVDKLK-NLDHVDTLVHAAAVARDTT------------IEAGSV----AEWHAHL 103

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N +    +   L+P L+ + S  ++ ++S  G   +                      
Sbjct: 104 DLNVIVPAELSRQLLPALR-AASGCVIYINSGAGNGPH---------------------- 140

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                                     Y  SK A+        K+  N  I  + V PG  
Sbjct: 141 ---------------------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPT 179

Query: 247 KTEMT 251
            T M 
Sbjct: 180 NTPML 184

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  104 bits (262), Expect = 1e-26
 Identities = 42/280 (15%), Positives = 87/280 (31%), Gaps = 77/280 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-------LEAVEKLKHSGFDNVIFH 61
             ++G ++GIG  + +++A +G    L A+  +           A ++++ +G    +  
Sbjct: 12  MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-GQALPI 70

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
             D+ D  A+ +        FG +DI VNNA    + S  +                   
Sbjct: 71  VGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEV----------------PL 114

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           +  +        G   + ++ IP ++  D+  I+ +S  +                    
Sbjct: 115 KRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR------------------- 155

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--N 239
                                     W      Y+++K  M      +A++  +  I  N
Sbjct: 156 ----------------------LEPKWL-RPTPYMMAKYGMTLCALGIAEELRDAGIASN 192

Query: 240 CVCPG-YVKTEMTYNA-------GRL-TVEEGAESPVWLA 270
            + P   V T    N         R    E  A++   + 
Sbjct: 193 TLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVVL 232

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  104 bits (261), Expect = 1e-26
 Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 62/246 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG ++G+G+ + + LA  G   V+ +R+ +   EA +KL        +  + DV++ 
Sbjct: 24  ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY 83

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ-TYESAEKC 127
             +  + + ++  FGKLD +VN AGI                   R    +   +   + 
Sbjct: 84  EEVKKLLEAVKEKFGKLDTVVNAAGIN-----------------RRHPAEEFPLDEFRQV 126

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERV 187
           ++ N  G   +C     LL+ SD+  I+N+ S                            
Sbjct: 127 IEVNLFGTYYVCREAFSLLRESDNPSIINIGS---------------------------- 158

Query: 188 DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPGY 245
             +  + +               N +AY  SK  + + T+ LAK++      +N + PG+
Sbjct: 159 --LTVEEVTM------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGW 204

Query: 246 VKTEMT 251
            +T+MT
Sbjct: 205 YRTKMT 210

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  104 bits (261), Expect = 1e-26
 Identities = 51/249 (20%), Positives = 87/249 (34%), Gaps = 65/249 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG+ +G+G+     LA  G   +L         E+V+ L   G+D       DV 
Sbjct: 10  KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYD-AHGVAFDVT 68

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ-TYESAE 125
           D  AI +    + +    +DIL+NNAGI                   R  M +   E+ +
Sbjct: 69  DELAIEAAFSKLDAEGIHVDILINNAGIQ-----------------YRKPMVELELENWQ 111

Query: 126 KCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           K + TN   A  +  +    ++  +   +I+N+ S   +                     
Sbjct: 112 KVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-------------------- 151

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVC 242
                             P         A Y  +K  +   T  +A ++   N   N + 
Sbjct: 152 ----------------ARP-------TVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIG 188

Query: 243 PGYVKTEMT 251
           PGY+ T+M 
Sbjct: 189 PGYILTDMN 197

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  103 bits (259), Expect = 1e-26
 Identities = 47/249 (18%), Positives = 79/249 (31%), Gaps = 73/249 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
             A+VTGA KGIG + V+ L  +G   V   R     +   ++        +    +D+ 
Sbjct: 8   LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLG 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A            G +D+LVNNA +  +    +                 T E+ ++
Sbjct: 63  DWDATEKALG----GIGPVDLLVNNAALVIMQPFLEV----------------TKEAFDR 102

Query: 127 CLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
               N     ++ + +   ++       IVNVSS +  +                     
Sbjct: 103 SFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--------------------- 141

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KYPNFCINCVC 242
                            P       N   Y  +K AM   T+ +A     +    +N V 
Sbjct: 142 ---------------TFP-------NLITYSSTKGAMTMLTKAMAMELGPH-KIRVNSVN 178

Query: 243 PGYVKTEMT 251
           P  V T+M 
Sbjct: 179 PTVVLTDMG 187

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  102 bits (257), Expect = 3e-26
 Identities = 65/281 (23%), Positives = 98/281 (34%), Gaps = 88/281 (31%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTG N+GIG  + ++LA +G    +T R                       ++DV 
Sbjct: 16  RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFGV------------EVDVT 63

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A+      +  H G +++LV+NAG++     AD              M  T E  EK
Sbjct: 64  DSDAVDRAFTAVEEHQGPVEVLVSNAGLS-----ADAFL-----------MRMTEEKFEK 107

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  GA R+ +     +Q +   R++ + S  G                        
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW---------------------- 145

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                         G        AN AA   SKA +    R +A++    N   N V PG
Sbjct: 146 --------------GIG---N-QANYAA---SKAGVIGMARSIARELSKANVTANVVAPG 184

Query: 245 YVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
           Y+ T+MT                A R+ T  E A    +LA
Sbjct: 185 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA 225

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  102 bits (257), Expect = 3e-26
 Identities = 62/289 (21%), Positives = 95/289 (32%), Gaps = 92/289 (31%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 R  +VTG N+GIG  + R  A  G    +T R  +              +  + 
Sbjct: 16  PRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------EGFLA 63

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
            + D+ D   +      I    G +++L+ NAG+T      D L            M  +
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT-----KDQLL-----------MRMS 107

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            E     ++TN  G  R+ +     +  +   R+V +SS +G                  
Sbjct: 108 EEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVG------------------ 149

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NF 236
                                     G    AN AA   SKA +  + R LA++    N 
Sbjct: 150 ------------------------LLGSAGQANYAA---SKAGLVGFARSLARELGSRNI 182

Query: 237 CINCVCPGYVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
             N V PG+V T+MT                 GR    EE A +  +LA
Sbjct: 183 TFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLA 231

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  102 bits (256), Expect = 3e-26
 Identities = 52/284 (18%), Positives = 90/284 (31%), Gaps = 86/284 (30%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           +R A+VTG ++GIG  +   L   G    + +R+ +   +++           +    D+
Sbjct: 2   ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG---------AVPLPTDL 52

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            +      +        G L +LV+ A +          +           +  +YE   
Sbjct: 53  -EKDDPKGLVKRALEALGGLHVLVHAAAVN-----VRKPA-----------LELSYEEWR 95

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + L  +   A  + +A  P +  +   R++ + S                          
Sbjct: 96  RVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT----------------------- 132

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                              T G P    AY  +K A+   TR LAK++      +N +CP
Sbjct: 133 ------------------FTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174

Query: 244 GYVKTEMTYN----------------AGRL-TVEEGAESPVWLA 270
           GYV+TE T                   GR    EE A     L 
Sbjct: 175 GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLC 218

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  102 bits (257), Expect = 3e-26
 Identities = 58/257 (22%), Positives = 90/257 (35%), Gaps = 73/257 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD------NVIF 60
             A+VTGA  GIG  V  +LA  G        D     E V  L   G        N   
Sbjct: 8   ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAA 67

Query: 61  HQLDVADPAAIHSVADFIRSHFGK-LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
            Q DV++  A   + + +++ F +   ++V+ AGIT      D     +        M++
Sbjct: 68  FQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT-----QDEF--LL-------HMSE 113

Query: 120 TYESAEKCLQTNYLGAKRMCEALI-PLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
             +  +K +  N  G   + +A    L+       I+N+SS +GK+              
Sbjct: 114 --DDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-------------- 157

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYPNF 236
                                       G     N AA   SKA +   T+  A++    
Sbjct: 158 ----------------------------GNVGQTNYAA---SKAGVIGLTQTAARELGRH 186

Query: 237 CI--NCVCPGYVKTEMT 251
            I  N V PG++ T MT
Sbjct: 187 GIRCNSVLPGFIATPMT 203

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  103 bits (258), Expect = 5e-26
 Identities = 42/280 (15%), Positives = 76/280 (27%), Gaps = 79/280 (28%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVI 59
           M       A+VTGA K +G  +   L   G    L   R           L     ++ I
Sbjct: 4   MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI 63

Query: 60  FHQLDVADPAA-----------------IHSVADFIRSHFGKLDILVNNAGITGISSDAD 102
             Q D+++ A                     +     +H+G+ D+LVNNA          
Sbjct: 64  TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-----YP 118

Query: 103 TLSGFIEE---GVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSAR 153
           T     +E       G       +      +N +    + +A    +  +       +  
Sbjct: 119 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 178

Query: 154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAA 213
           I+N+  ++                                            +       
Sbjct: 179 IINMVDAMT------------------------------------------NQPLL-GYT 195

Query: 214 AYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMT 251
            Y ++K A+   TR  A +       +N V PG   + + 
Sbjct: 196 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLV 233

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  103 bits (258), Expect = 5e-26
 Identities = 45/289 (15%), Positives = 88/289 (30%), Gaps = 76/289 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD 67
           AVVTGA K IG  +  +L   G   V+      +  +   ++L     +  +  Q D+ +
Sbjct: 26  AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85

Query: 68  ----PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
               PA+   + +     FG+ D+LVNNA          T     +              
Sbjct: 86  SNVLPASCEEIINSCFRAFGRCDVLVNNASAF-----YPTPLVQGDHEDNS-NGKTVETQ 139

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSD------SARIVNVSSSLGKLMYVTHEWAKGVFS 177
             + + TN +    +  +     + ++      +  IVN+  ++                
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMV--------------- 184

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN 235
                                       +      + Y + K A+   T+  A +     
Sbjct: 185 ---------------------------DQPCM-AFSLYNMGKHALVGLTQSAALELAPYG 216

Query: 236 FCINCVCPGYVKTEMTYN------------AGRL--TVEEGAESPVWLA 270
             +N V PG     +                GR   + E+ A++ ++L 
Sbjct: 217 IRVNGVAPGVSLLPVAMGEEEKDKWRRKVPLGRREASAEQIADAVIFLV 265

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  103 bits (259), Expect = 5e-26
 Identities = 42/280 (15%), Positives = 76/280 (27%), Gaps = 79/280 (28%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVI 59
           M       A+VTGA K +G  +   L   G    L   R           L     ++ I
Sbjct: 41  MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAI 100

Query: 60  FHQLDVADPAA-----------------IHSVADFIRSHFGKLDILVNNAGITGISSDAD 102
             Q D+++ A                     +     +H+G+ D+LVNNA          
Sbjct: 101 TVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-----YP 155

Query: 103 TLSGFIEE---GVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSAR 153
           T     +E       G       +      +N +    + +A    +  +       +  
Sbjct: 156 TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYS 215

Query: 154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAA 213
           I+N+  ++                                            +       
Sbjct: 216 IINMVDAMT------------------------------------------NQPLL-GYT 232

Query: 214 AYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMT 251
            Y ++K A+   TR  A +       +N V PG   + + 
Sbjct: 233 IYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL--SVLV 270

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  101 bits (255), Expect = 8e-26
 Identities = 58/248 (23%), Positives = 84/248 (33%), Gaps = 66/248 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R AVVTGA  GIG  +    A  G   +   R +    E  +++   G         D+A
Sbjct: 32  RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGS-AEAVVADLA 89

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA-E 125
           D     +VA+ + +   ++D+LVNNAGI                  AR    +       
Sbjct: 90  DLEGAANVAEEL-AATRRVDVLVNNAGII-----------------ARAPAEEVSLGRWR 131

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           + L  N   A  +  +    +    S RIV ++S L                        
Sbjct: 132 EVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQ--------------------- 170

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCP 243
                          G         N AAY  SK A+   TR LA ++      +N + P
Sbjct: 171 ---------------GGR-------NVAAYAASKHAVVGLTRALASEWAGRGVGVNALAP 208

Query: 244 GYVKTEMT 251
           GYV T  T
Sbjct: 209 GYVVTANT 216

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  101 bits (254), Expect = 9e-26
 Identities = 55/255 (21%), Positives = 92/255 (36%), Gaps = 73/255 (28%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M +   + +++TGA+ GIG  + R L   G   +++  +E+        LK    DN   
Sbjct: 9   MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTI 64

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              ++A+     ++          LDILV NAGIT     +DTL+           +   
Sbjct: 65  EVCNLANKEECSNLIS----KTSNLDILVCNAGIT-----SDTLA-----------IRMK 104

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            +  +K +  N      +    I  +      RI+N+SS +G                  
Sbjct: 105 DQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG------------------ 146

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYP--NF 236
                                     G P  AN  A   SKA +   T+ L+ +      
Sbjct: 147 ------------------------IAGNPGQANYCA---SKAGLIGMTKSLSYEVATRGI 179

Query: 237 CINCVCPGYVKTEMT 251
            +N V PG++K++MT
Sbjct: 180 TVNAVAPGFIKSDMT 194

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  102 bits (257), Expect = 1e-25
 Identities = 53/257 (20%), Positives = 87/257 (33%), Gaps = 68/257 (26%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALN---GIITVLTARDEK--GGLEAVEKLKHSGFDNVI 59
           A+   ++TG + GIG  +  +LA +         T RD K  G L    +       ++ 
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE 60

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             QLDV D  ++ +  + +    G++D+LV NAG+         L G +E          
Sbjct: 61  TLQLDVRDSKSVAAARERV--TEGRVDVLVCNAGLG--------LLGPLEAL-------- 102

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             ++    L  N +G  RM +A +P ++   S R++   S  G +               
Sbjct: 103 GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLM--------------- 147

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN 239
                                      G P N   Y  SK A+      LA     F ++
Sbjct: 148 ---------------------------GLPFN-DVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 240 --CVCPGYVKTEMTYNA 254
              +  G V T      
Sbjct: 180 LSLIECGPVHTAFMEKV 196

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  101 bits (254), Expect = 2e-25
 Identities = 51/261 (19%), Positives = 84/261 (32%), Gaps = 67/261 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITV----------LTARDEKGGLEAVEKLKHSGFD 56
            +VTG  +G G     +LA  G  II                  +   EA  +++ +G  
Sbjct: 13  VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-R 71

Query: 57  NVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
                ++DV D AA+        + FGKLD++V NAGI  + +                 
Sbjct: 72  KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL--------------- 116

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
                ++       +++G      A +P   L+  A I+   S  G              
Sbjct: 117 ---PVQAFADAFDVDFVGVINTVHAALP--YLTSGASIITTGSVAG-------------- 157

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF 236
                             L    +            A Y  +K  +++YT  LA +    
Sbjct: 158 ------------------LIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQ 199

Query: 237 CI--NCVCPGYVKTEMTYNAG 255
            I  N + P  V T+M  +A 
Sbjct: 200 SIRANVIHPTNVNTDMLNSAP 220

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 99.3 bits (248), Expect = 2e-25
 Identities = 30/249 (12%), Positives = 63/249 (25%), Gaps = 86/249 (34%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
            A +  ++ GA+  +G  V  +L     + +   R                        +
Sbjct: 2   NAMK-ILLIGASGTLGSAVKERLEKKAEV-ITAGRHSGD------------------VTV 41

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D+ +  +I  + +      GK+D +V+  G    S   +                 T E 
Sbjct: 42  DITNIDSIKKMYE----QVGKVDAIVSATGSATFSPLTEL----------------TPEK 81

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
               + +   G   +    I    L+D       +  +                      
Sbjct: 82  NAVTISSKLGGQINLVLLGIDS--LNDKGSFTLTTGIMM--------------------- 118

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP-NFCINCVC 242
                                        A+  ++  A+ A+ +  A + P    IN V 
Sbjct: 119 ---------------------EDPIV-QGASAAMANGAVTAFAKSAAIEMPRGIRINTVS 156

Query: 243 PGYVKTEMT 251
           P  ++    
Sbjct: 157 PNVLEESWD 165

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  100 bits (251), Expect = 3e-25
 Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 62/248 (25%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVIFHQL 63
             +  ++TGA+ GIG  + R+L + G   +L AR +   +EA   +++ +G    +   L
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQAR-IEAIATEIRDAG-GTALAQVL 60

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           DV D  ++ + A      +G++D+LVNNAG+  +S             +A  K+    + 
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP------------LAAVKV----DE 104

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            E+ +  N  G      A++P+++   S +I+N+ S     +                  
Sbjct: 105 WERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV----------------- 147

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP 243
                                       AA Y  +K A+ A +  L ++  N  + CV P
Sbjct: 148 --------------------------PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNP 181

Query: 244 GYVKTEMT 251
           G V++E+ 
Sbjct: 182 GVVESELA 189

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  103 bits (258), Expect = 3e-25
 Identities = 62/250 (24%), Positives = 91/250 (36%), Gaps = 74/250 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAV-EKLKHSGFDNVIFHQLDVA 66
           AVVTGA +GIG  +    A +G   V    D     L+ V +K+  +         LDV 
Sbjct: 216 AVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL------TLDVT 269

Query: 67  DPAAIHSVADFIRSHFG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
              A+  +   +  H G K+DILVNNAGIT      D L       +A   M +  +  +
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGIT-----RDKL-------LAN--MDE--KRWD 313

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             +  N L  +R+ E L+    + +  R++ +SS  G           G           
Sbjct: 314 AVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAG---------IAG----------- 353

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANA--AAYILSKAAMNAYTRILAKKYP--NFCINCV 241
                                    N     Y  +KA M      LA         IN V
Sbjct: 354 -------------------------NRGQTNYATTKAGMIGLAEALAPVLADKGITINAV 388

Query: 242 CPGYVKTEMT 251
            PG+++T+MT
Sbjct: 389 APGFIETKMT 398

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  100 bits (251), Expect = 4e-25
 Identities = 55/287 (19%), Positives = 84/287 (29%), Gaps = 76/287 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITV-----------LTARDEKGGLEAVEKLKHSGF 55
           A +TGA +G G     ++A  G  II V                     E V  ++ +  
Sbjct: 14  AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN- 72

Query: 56  DNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARG 115
             ++   +D  D   +  V D   +  G+LDI+V NAG+    +  D             
Sbjct: 73  RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDI------------ 120

Query: 116 KMTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKG 174
               T E     +  N  G      A  P +++      I+ +SS+ G            
Sbjct: 121 ----TPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM----------- 165

Query: 175 VFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP 234
                                          K  P     Y  SK A+    R  A +  
Sbjct: 166 -------------------------------KMQP-FMIHYTASKHAVTGLARAFAAELG 193

Query: 235 NFCI--NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
              I  N V PG V T M        V +  E+   L+ +       
Sbjct: 194 KHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD 240

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 99.6 bits (249), Expect = 8e-25
 Identities = 55/266 (20%), Positives = 86/266 (32%), Gaps = 78/266 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITV--------------LTARDEKGGLEAVEKLKH 52
           A VTGA +G G     +LA  G  II V              + A   +   E  + +K 
Sbjct: 14  AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73

Query: 53  SGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGV 112
                ++  ++DV D  A+ +  D      G+LDI+V NAGI       D          
Sbjct: 74  HNRR-IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKT-------- 124

Query: 113 ARGKMTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEW 171
                  + E   + +  N  G  +  +A +P ++       I+  SS  G         
Sbjct: 125 -------SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL-------- 169

Query: 172 AKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK 231
                                             K +P +   Y+ +K  +    R    
Sbjct: 170 ----------------------------------KAYP-HTGHYVAAKHGVVGLMRAFGV 194

Query: 232 KYPNFCI--NCVCPGYVKTEMTYNAG 255
           +     I  N V P +VKT M +N G
Sbjct: 195 ELGQHMIRVNSVHPTHVKTPMLHNEG 220

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 98.8 bits (247), Expect = 1e-24
 Identities = 56/272 (20%), Positives = 84/272 (30%), Gaps = 76/272 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITV-----------LTARDEKGGLEAVEKLKHSGF 55
           A +TGA +G G     +LA  G  II                   +   E    ++  G 
Sbjct: 18  AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG- 76

Query: 56  DNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARG 115
              +   LDV D AA+  +       FG+LD++V NAG+       +             
Sbjct: 77  RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWEL------------ 124

Query: 116 KMTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKG 174
               T E  +  +  N  G  R   A +P +++  +   IV VSSS G            
Sbjct: 125 ----TDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL----------- 169

Query: 175 VFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP 234
                                          K  P     Y  SK  + A T  LA +  
Sbjct: 170 -------------------------------KATP-GNGHYSASKHGLTALTNTLAIELG 197

Query: 235 NFCI--NCVCPGYVKTEMTYNAGRLTVEEGAE 264
            + I  N + P  V+T M      + +     
Sbjct: 198 EYGIRVNSIHPYSVETPMIEPEAMMEIFARHP 229

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 97.6 bits (244), Expect = 2e-24
 Identities = 50/282 (17%), Positives = 86/282 (30%), Gaps = 93/282 (32%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +V  A++GIG  V   L+  G    + AR+E       E LK SG      H+  V 
Sbjct: 20  KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG------HRYVVC 66

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D   +    D +     ++DILV NAG                          T E  ++
Sbjct: 67  D---LRKDLDLLFEKVKEVDILVLNAGGP-----KAGFF-----------DELTNEDFKE 107

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            + + +L   ++    +P ++     RIV ++S                           
Sbjct: 108 AIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV------------------------ 143

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                                   N      ++ A+  + + L+ +       +NCV PG
Sbjct: 144 ------------ISPIE-------NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 184

Query: 245 YVKTEMTYN---------------AGRL-TVEEGAESPVWLA 270
           + +TE                     R+   EE A    +L 
Sbjct: 185 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC 226

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 98.8 bits (247), Expect = 2e-24
 Identities = 55/260 (21%), Positives = 83/260 (31%), Gaps = 74/260 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITV----------LTARDEKGGLEAVEKLKHSGFD 56
           A +TGA +G G      LA  G  II +          L         E V +++  G  
Sbjct: 31  AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-R 89

Query: 57  NVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
            +I  Q+DV D  A+ +  D   +  G+LDI++ NA +    +  + +            
Sbjct: 90  RIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRM------------ 137

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
                ++    +  N  GA       IP ++       IV  SS  G             
Sbjct: 138 ---DPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG------------- 181

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
                                         +G   N   YI SK  ++   R +A +   
Sbjct: 182 -----------------------------LRGAE-NIGNYIASKHGLHGLMRTMALELGP 211

Query: 236 FCI--NCVCPGYVKTEMTYN 253
             I  N VCP  V T M  N
Sbjct: 212 RNIRVNIVCPSSVATPMLLN 231

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 97.2 bits (243), Expect = 2e-24
 Identities = 40/269 (14%), Positives = 81/269 (30%), Gaps = 76/269 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            V+TGA+ G+G E+ +     G  T LT R E      +  + +   +NV +   D+A  
Sbjct: 4   IVITGASSGLGAELAKLYDAEGKATYLTGRSE----SKLSTVTNCLSNNVGYRARDLASH 59

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +  + + +         +V++AG            G ++E           E  +  +
Sbjct: 60  QEVEQLFEQL---DSIPSTVVHSAGS--------GYFGLLQEQ--------DPEQIQTLI 100

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N   A  +   L+   +      +V + S+  +                         
Sbjct: 101 ENNLSSAINVLRELVKRYK-DQPVNVVMIMSTAAQQPK---------------------- 137

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN--CVCPGYV 246
                                A  + Y   K A+      +  +     +    V PG +
Sbjct: 138 ---------------------AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGM 176

Query: 247 KTEMTYNAGR-------LTVEEGAESPVW 268
            TE    +G+       ++ E+ A     
Sbjct: 177 ATEFWETSGKSLDTSSFMSAEDAALMIHG 205

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 95.7 bits (239), Expect = 2e-23
 Identities = 52/273 (19%), Positives = 82/273 (30%), Gaps = 75/273 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITV----------LTARDEKGGLEAVEKLKHSGFD 56
           A +TGA +G G     +LA +G  II V                +     V+ ++  G  
Sbjct: 16  AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSR 75

Query: 57  NVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
            ++  Q DV D  ++ +         G+LDI+V NAGI                      
Sbjct: 76  -IVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-------------------- 114

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
           M+   +     +  N  G     +  IP L++      IV +SSS G             
Sbjct: 115 MSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG------------- 161

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
                              L       P        +  Y+ +K  +    R+ A     
Sbjct: 162 -------------------LAGVGSADP-------GSVGYVAAKHGVVGLMRVYANLLAG 195

Query: 236 FCI--NCVCPGYVKTEMTYNAGRLTVEEGAESP 266
             I  N + P  V+T M  N           + 
Sbjct: 196 QMIRVNSIHPSGVETPMINNEFTREWLAKMAAA 228

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 94.5 bits (236), Expect = 3e-23
 Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 21/159 (13%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA  G G  + R+    G   + T R +    E +++LK    DN+   QLDV + 
Sbjct: 3   VLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVRNR 58

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYESAEKC 127
           AAI  +   + + +  +DILVNNAG+  G+                +  +    E  E  
Sbjct: 59  AAIEEMLASLPAEWCNIDILVNNAGLALGMEP------------AHKASV----EDWETM 102

Query: 128 LQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
           + TN  G   M  A++P +   +   I+N+ S+ G   Y
Sbjct: 103 IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY 141

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 95.3 bits (238), Expect = 3e-23
 Identities = 56/266 (21%), Positives = 83/266 (31%), Gaps = 72/266 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKG---------GLEAVEK 49
           MA+   + A++TG  +G+G      LA  G  I       +             L     
Sbjct: 5   MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVA 64

Query: 50  LKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIE 109
           L        I  ++DV D AA+ S         G +DI + NAGI+        L     
Sbjct: 65  LVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS-----TIALL---- 115

Query: 110 EGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTH 169
                          ++ + TN  G      A+ P +   +  RIV VSS LG       
Sbjct: 116 -------PEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN--- 165

Query: 170 EWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL 229
                                                      A+Y+ SK  +   T+  
Sbjct: 166 ----------------------------------------FAQASYVSSKWGVIGLTKCA 185

Query: 230 AKKYPNFCI--NCVCPGYVKTEMTYN 253
           A     + I  N V PG ++T MT+N
Sbjct: 186 AHDLVGYGITVNAVAPGNIETPMTHN 211

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 95.8 bits (239), Expect = 4e-23
 Identities = 60/260 (23%), Positives = 95/260 (36%), Gaps = 75/260 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNG--IITVLTARD----------EKGGLEAVEKLKHSGFD 56
           A +TGA +G G     +LA +G  I+ +   R            +   E V  ++  G  
Sbjct: 49  AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRR 108

Query: 57  NVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
            +I  Q DV D A++ +V D   + FG +DILV+N GI+   +  + +            
Sbjct: 109 -IIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS---NQGEVV-----------S 153

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGV 175
           +T   +     LQTN +GA   C A++P +++      ++ VSS++G             
Sbjct: 154 LTD--QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA--------- 202

Query: 176 FSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPN 235
                                                + Y  SK  +      LA +   
Sbjct: 203 ----------------------------------PGQSHYAASKHGVQGLMLSLANEVGR 228

Query: 236 FCI--NCVCPGYVKTEMTYN 253
             I  N V PG V TEM  N
Sbjct: 229 HNIRVNSVNPGAVNTEMALN 248

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 93.9 bits (234), Expect = 1e-22
 Identities = 53/259 (20%), Positives = 87/259 (33%), Gaps = 66/259 (25%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFD-NV 58
           M     R A+VTGA+ GIG  V R L   G+  V  AR   G +E    + K +G+   +
Sbjct: 27  MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV-GNIEELAAECKSAGYPGTL 85

Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
           I ++ D+++   I S+   IRS    +DI +NNAG+             +  G       
Sbjct: 86  IPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL--------ARPDTLLSG------- 130

Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLL--QLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
            +    +     N L            +  +  D   I+N++S  G  +           
Sbjct: 131 -STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-------- 181

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL----AKK 232
                                            +    Y  +K A+ A T  L     + 
Sbjct: 182 ---------------------------------SVTHFYSATKYAVTALTEGLRQELREA 208

Query: 233 YPNFCINCVCPGYVKTEMT 251
             +    C+ PG V+T+  
Sbjct: 209 QTHIRATCISPGVVETQFA 227

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 92.8 bits (231), Expect = 1e-22
 Identities = 29/275 (10%), Positives = 60/275 (21%), Gaps = 80/275 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +V G    +G   V+               E     A   +K +             
Sbjct: 8   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD---------SFT 58

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           + A   +          K+D ++  AG     +                     +++ + 
Sbjct: 59  EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKS---------------LFKNCDL 103

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + +   +          L+  +   +    +                           
Sbjct: 104 MWKQSIWTSTISSHLATKHLK--EGGLLTLAGAKAA------------------------ 137

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVC 242
                               G P     Y ++K A++   + LA K            V 
Sbjct: 138 ------------------LDGTP-GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVL 178

Query: 243 PGYVKTEMT------YNAGRLT-VEEGAESPVWLA 270
           P  + T M        +    T +E   E+     
Sbjct: 179 PVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWI 213

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 29/277 (10%), Positives = 67/277 (24%), Gaps = 84/277 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
              +V G    +G  ++     NG   +          ++            I    +  
Sbjct: 4   GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN-----------ILVDGNKN 52

Query: 67  DPAAIHSVADFIRS--HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
                 S+ +   S     ++D +   AG     S +                    ++A
Sbjct: 53  WTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDF---------------VKNA 97

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  ++ +   +    +     L+      +    ++                        
Sbjct: 98  DLMIKQSVWSSAIAAKLATTHLK--PGGLLQLTGAAAA---------------------- 133

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINC 240
                                   P +   Y ++KAA++  T  LA K      N  +  
Sbjct: 134 --------------------MGPTP-SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 172

Query: 241 VCPGYVKTEMT------YNAGRLT-VEEGAESPVWLA 270
           + P  + T M        +    T +   +E  +   
Sbjct: 173 IMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWT 209

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 90.3 bits (225), Expect = 1e-21
 Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 28/169 (16%)

Query: 1   MAET-AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVI 59
           M     K+  V+TGA+ GIG  + R+ +  G   +L AR         E+LK     N +
Sbjct: 10  MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV-------ERLKALNLPNTL 62

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGIS--SDADTLSGFIEEGVARGKM 117
             Q+DV D     +        +G  D +VNNAG+  +      +               
Sbjct: 63  CAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEA-------------- 108

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
                  ++    N LG     +A++  ++  +   I+N+SS  GK  +
Sbjct: 109 ----NEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF 153

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 89.1 bits (222), Expect = 3e-21
 Identities = 51/169 (30%), Positives = 70/169 (41%), Gaps = 23/169 (13%)

Query: 1   MAET-AKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEA-VEKLKHSGFDN 57
           M      + A++TGA+ GIG    R LA  G    + AR  EK  L A  ++L  +G   
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEK--LRALGDELTAAG-AK 57

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
           V   +LDVAD   + +         G LDILVNNAGI  +              V     
Sbjct: 58  VHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP------------VEDADT 105

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY 166
                   + + TN LG   M  A +P L L     +V +SS  G++  
Sbjct: 106 ----TDWTRMIDTNLLGLMYMTRAALPHL-LRSKGTVVQMSSIAGRVNV 149

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 90.0 bits (224), Expect = 3e-21
 Identities = 59/258 (22%), Positives = 87/258 (33%), Gaps = 70/258 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIIT---VLTAR-DEKGGLEAV--EKLKHSG 54
               AK+  ++TGA+ GIG     +           +L AR  EK  LE +     +   
Sbjct: 28  AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEK--LEELKKTIDQEFP 85

Query: 55  FDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGIT-GISSDADTLSGFIEEGVA 113
              V   QLD+     I    + +   F  +DILVNNAG   G               V 
Sbjct: 86  NAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR------------VG 133

Query: 114 RGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAK 173
           +       E  +    TN      + +A++P+ Q  +S  IVN+ S  G+  Y       
Sbjct: 134 QIAT----EDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY------- 182

Query: 174 GVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY 233
                                                  + Y  SK A+ A+T  L K+ 
Sbjct: 183 ------------------------------------PTGSIYCASKFAVGAFTDSLRKEL 206

Query: 234 PNFCIN--CVCPGYVKTE 249
            N  I    + PG V+TE
Sbjct: 207 INTKIRVILIAPGLVETE 224

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 88.1 bits (219), Expect = 1e-20
 Identities = 53/257 (20%), Positives = 80/257 (31%), Gaps = 69/257 (26%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH--SGFDNV 58
                     +TGA  G G    R+ A  G   VLT R E    E ++ L    S    V
Sbjct: 16  RGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRRE----ERLQALAGELSAKTRV 71

Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGI-TGISSDADTLSGFIEEGVARGKM 117
           +   LDV D AA+ +  D +   F  L  L+NNAG+  G                    +
Sbjct: 72  LPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDP------------AQSCDL 119

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSLGKLMYVTHEWAKGVF 176
               +  +  + TN  G       L+P L    + A IVN+ S  GK  Y          
Sbjct: 120 ----DDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY---------- 165

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF 236
                                              +  Y  +KA +  ++  L       
Sbjct: 166 ---------------------------------PGSHVYGGTKAFVEQFSLNLRCDLQGT 192

Query: 237 CIN--CVCPGYVKTEMT 251
            +    + PG  ++E +
Sbjct: 193 GVRVTNLEPGLCESEFS 209

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 83.4 bits (207), Expect = 5e-19
 Identities = 31/247 (12%), Positives = 64/247 (25%), Gaps = 63/247 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL--KHSGFDNVIFHQLDVA 66
             +TG+  GIG  +   LA  G   +   R +      +     + +    V+     V 
Sbjct: 4   IAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVL 63

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D   +      + +    L + VN  G++ +                   +++       
Sbjct: 64  D-GLVCCAGVGVTAANSGLVVAVNYFGVSALL------------DGLAEALSR--GQQPA 108

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +    + A +   A +P+++   +           +                       
Sbjct: 109 AVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQ---------------------- 146

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                      AY  SK A+    R     +    +  N V PG
Sbjct: 147 ----------------------GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPG 184

Query: 245 YVKTEMT 251
            V+T + 
Sbjct: 185 AVETPLL 191

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 82.7 bits (205), Expect = 1e-18
 Identities = 38/259 (14%), Positives = 74/259 (28%), Gaps = 66/259 (25%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           + +     A+V+G   G+G   VR+L  +G+  V+     + G    ++L     +   F
Sbjct: 25  IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG----NRAEF 80

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
              +V    ++ +  +           +V + G          +         R      
Sbjct: 81  VSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGV---AQRIVQ--------RDGSPAD 129

Query: 121 YESAEKCLQTN----YLGAKRMCEALIPLLQLSDSAR--IVNVSSSLGKLMYVTHEWAKG 174
                K +       Y  A+ +  ++       +  R  +V  +S  G            
Sbjct: 130 MGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG------------ 177

Query: 175 VFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP 234
                                    EG            AY  +KA +   T   A+   
Sbjct: 178 ------------------------YEGQI-------GQTAYAAAKAGVIGLTIAAARDLS 206

Query: 235 NFCI--NCVCPGYVKTEMT 251
           +  I  N + PG +KT + 
Sbjct: 207 SAGIRVNTIAPGTMKTPIM 225

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 82.2 bits (204), Expect = 2e-18
 Identities = 56/255 (21%), Positives = 85/255 (33%), Gaps = 67/255 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           R A+VTG + GIG       A  G    I  L   +E+   +    ++  G   V+    
Sbjct: 50  RKALVTGGDSGIGRAAAIAYAREGADVAINYL-PAEEEDAQQVKALIEECGRKAVLL-PG 107

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
           D++D +   S+    R   G LDIL   AG      +   L               T E 
Sbjct: 108 DLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDL---------------TSEQ 152

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
            ++    N      + +  IPLL     A I+  SS       +                
Sbjct: 153 FQQTFAVNVFALFWITQEAIPLLP--KGASIITTSS-------IQAY------------- 190

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                           + SP       +   Y  +KAA+  Y+R LAK+     I  N V
Sbjct: 191 ----------------QPSP-------HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIV 227

Query: 242 CPGYVKTEMTYNAGR 256
            PG + T +  + G+
Sbjct: 228 APGPIWTALQISGGQ 242

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 52/253 (20%), Positives = 79/253 (31%), Gaps = 69/253 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG   G+G     +L   G   VL      GG    +KL     +N +F   DV   
Sbjct: 15  AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSE 70

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             + +     +  FG++D+ VN AGI      + T +        +   T T E  ++ L
Sbjct: 71  KDVQTALALAKGKFGRVDVAVNCAGIAV---ASKTYN-------LKKGQTHTLEDFQRVL 120

Query: 129 QTNYLG--------AKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
             N +G        A  M +      Q      I+N +S                     
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQN--EPDQGGQRGVIINTASVAA------------------ 160

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                              EG     G  A +A    SK  +   T  +A+      I  
Sbjct: 161 ------------------FEGQV---GQAAYSA----SKGGIVGMTLPIARDLAPIGIRV 195

Query: 239 NCVCPGYVKTEMT 251
             + PG   T + 
Sbjct: 196 MTIAPGLFGTPLL 208

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 76.9 bits (190), Expect = 1e-16
 Identities = 55/251 (21%), Positives = 77/251 (30%), Gaps = 67/251 (26%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTGA+ G+G  V R LA  G   +        G E   +L       V F   DV + 
Sbjct: 10  FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG----AAVRFRNADVTNE 65

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A   +   F +  FG +  LVN AG          L          G      +S  + +
Sbjct: 66  ADATAALAFAKQEFGHVHGLVNCAGTAP---GEKILG-------RSGPH--ALDSFARTV 113

Query: 129 QTNYLG----AKRMCEALIPLLQLSDSAR--IVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             N +G     +   E +      +D  R  IVN +S                       
Sbjct: 114 AVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA-------------------- 153

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NC 240
                            +G     G  A AA    SK  + A T   A++   F I    
Sbjct: 154 ----------------FDGQI---GQAAYAA----SKGGVAALTLPAARELARFGIRVVT 190

Query: 241 VCPGYVKTEMT 251
           + PG   T M 
Sbjct: 191 IAPGIFDTPMM 201

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 75.7 bits (187), Expect = 5e-16
 Identities = 48/248 (19%), Positives = 81/248 (32%), Gaps = 64/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL-KHSGFDNVIFHQLDV 65
           +  ++TG + GIG  V    A  G    +   DE+G     ++  +  G   V+    D+
Sbjct: 48  KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL-PGDL 106

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D      +        G L+ILVNN                +E       +T   E  E
Sbjct: 107 SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQG-------LEY------ITA--EQLE 151

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K  + N      + +A +  L+      I+N +S                          
Sbjct: 152 KTFRINIFSYFHVTKAALSHLK--QGDVIINTAS-------------------------- 183

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                    +  Y+ G+            Y  +K A+ A+TR L++      I  N V P
Sbjct: 184 ---------IVAYE-GNE-------TLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP 226

Query: 244 GYVKTEMT 251
           G + T + 
Sbjct: 227 GPIWTPLI 234

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 68.4 bits (168), Expect = 9e-14
 Identities = 48/253 (18%), Positives = 69/253 (27%), Gaps = 81/253 (32%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTG   G+G      L   G   V+     +G              ++I+ + DV   
Sbjct: 5   ALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVTRE 51

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +       +     L  +V+ AG+         L          G      ES  + L
Sbjct: 52  EDVRRAVARAQE-EAPLFAVVSAAGVGL---AEKILG-------KEGPH--GLESFRRVL 98

Query: 129 QTNYLG--------AKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           + N LG        A  M E   P         IVN +S                     
Sbjct: 99  EVNLLGTFNVLRLAAWAMREN--PPDAEGQRGVIVNTASVAA------------------ 138

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                              EG           AAY  SK  + A T   A++   + I  
Sbjct: 139 ------------------FEG-------QIGQAAYAASKGGVVALTLPAARELAGWGIRV 173

Query: 239 NCVCPGYVKTEMT 251
             V PG   T + 
Sbjct: 174 VTVAPGLFDTPLL 186

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 49/253 (19%), Positives = 77/253 (30%), Gaps = 73/253 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AVVTG   G+G    ++L   G   V+     +  +  +        D   F   DV D 
Sbjct: 12  AVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLG-------DRARFAAADVTDE 64

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           AA+ S  D   +  G L I+VN AG          LS         G    +  +  K +
Sbjct: 65  AAVASALDLAET-MGTLRIVVNCAGTGN---AIRVLS-------RDGVF--SLAAFRKIV 111

Query: 129 QTNYLG--------AKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
             N +G        A+R+ +         +   I+N +S                     
Sbjct: 112 DINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA------------------ 153

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                              +G     G  A +A    SK  +   T  +A+   +  I  
Sbjct: 154 ------------------FDGQI---GQAAYSA----SKGGVVGMTLPIARDLASHRIRV 188

Query: 239 NCVCPGYVKTEMT 251
             + PG   T + 
Sbjct: 189 MTIAPGLFDTPLL 201

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 60.5 bits (147), Expect = 9e-11
 Identities = 52/272 (19%), Positives = 78/272 (28%), Gaps = 85/272 (31%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLA----------LNGIITVLTARDEKGGLEAVEKL 50
           M     R  +VTGA  GIG       A          +   +    A         V+++
Sbjct: 22  MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEI 81

Query: 51  KHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEE 110
             +G + V     +VAD      +       FG LD+LVNNAGI                
Sbjct: 82  TAAGGEAVA-DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV--------------- 125

Query: 111 GVARGKMTQ--TYESAEKCLQTNYLGAKRMCEALIPLLQLSD------SARIVNVSSSLG 162
              R +M    + E  +  +  +  G            +           RI+N SS  G
Sbjct: 126 ---RDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182

Query: 163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAM 222
                      G                  Q                 N +A   +KA +
Sbjct: 183 LQ---------GSV---------------GQ----------------GNYSA---AKAGI 199

Query: 223 NAYTRILAK---KYPNFCINCVCPGYVKTEMT 251
              T + A    +Y    +N + P   +T MT
Sbjct: 200 ATLTLVGAAEMGRY-GVTVNAIAPS-ARTRMT 229

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 60.2 bits (146), Expect = 2e-10
 Identities = 40/167 (23%), Positives = 65/167 (38%), Gaps = 33/167 (19%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVL---------TARDEKGGLEAVEKLKHSGFDN 57
           R AVVTGA  G+G E     A  G   V+             ++     V++++ +G + 
Sbjct: 20  RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA 79

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
           V      V D A +   A      FG++DILVNNAGI                   R + 
Sbjct: 80  VA-DYNSVIDGAKVIETA---IKAFGRVDILVNNAGI------------------LRDRS 117

Query: 118 --TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
               + +        +  G+ +  +A  P ++  +  RI+  SS+ G
Sbjct: 118 LVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG 164

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 58.6 bits (142), Expect = 6e-10
 Identities = 55/257 (21%), Positives = 90/257 (35%), Gaps = 77/257 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVL---------TARDEKGGLEAVEKLKHSGFDN 57
           +  ++TGA  G+G     + A  G   V+            + K     V+++  +G   
Sbjct: 9   KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA 68

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
           V     +V D   I  V   +  +FG + +++NNAGI   +S                KM
Sbjct: 69  VA-DYNNVLDGDKI--VETAV-KNFGTVHVIINNAGILRDASMK--------------KM 110

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
           T+  +  +  +  +  GA  + +A  P  Q     RIVN SS  G  +Y           
Sbjct: 111 TE--KDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG--LY----------- 155

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KYP 234
                                  G+          A Y  +K+A+  +   LAK   KY 
Sbjct: 156 -----------------------GNF-------GQANYASAKSALLGFAETLAKEGAKY- 184

Query: 235 NFCINCVCPGYVKTEMT 251
           N   N + P   ++ MT
Sbjct: 185 NIKANAIAPL-ARSRMT 200

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 25/164 (15%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
                 +  ++TGA  G+G E  +  A  G   V+   D K   + V+++K +G      
Sbjct: 317 TVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVN--DFKDATKTVDEIKAAG-GEAWP 373

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ- 119
            Q DVA  +   ++   +   +G +DILVNNAGI                   R +    
Sbjct: 374 DQHDVAKDSE--AIIKNVIDKYGTIDILVNNAGIL------------------RDRSFAK 413

Query: 120 -TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG 162
            + +  +   Q + +G   +     P        RI+N++S+ G
Sbjct: 414 MSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 55.8 bits (135), Expect = 3e-09
 Identities = 45/257 (17%), Positives = 83/257 (32%), Gaps = 77/257 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVL---------TARDEKGGLEAVEKLKHSGFDN 57
           R  +VTGA  G+G       A  G + V+           +      + VE+++  G   
Sbjct: 10  RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 69

Query: 58  VIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKM 117
           V  +   V     +  V   +   FG++D++VNNAGI    S +              ++
Sbjct: 70  VA-NYDSVEAGEKL--VKTAL-DTFGRIDVVVNNAGILRDRSFS--------------RI 111

Query: 118 TQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
           +   E  +   + +  G+ ++  A    ++  +  RI+  +S+ G  +Y           
Sbjct: 112 SD--EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG--IY----------- 156

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK---KYP 234
                                  G+          A Y  +K  +      L     K  
Sbjct: 157 -----------------------GNF-------GQANYSAAKLGLLGLANTLVIEGRKN- 185

Query: 235 NFCINCVCPGYVKTEMT 251
           N   N + P    + MT
Sbjct: 186 NIHCNTIAPN-AGSRMT 201

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 17/97 (17%), Positives = 26/97 (26%), Gaps = 11/97 (11%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AVV      +G      LA  G   VL  R       A + +       V     + A
Sbjct: 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETA 177

Query: 67  DPAAIHSVADFIRSHFGKLDILVNN--AGITGISSDA 101
           D A+                 +      G+  +   A
Sbjct: 178 DDASRAEA-------VKGAHFVFTAGAIGLELLPQAA 207

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 8e-08
 Identities = 53/332 (15%), Positives = 93/332 (28%), Gaps = 103/332 (31%)

Query: 7   RYAVVTGANKGIG-----YEVVRQLAL-----NGI--ITVLTARDEKGGLEAVEKLKHSG 54
           +  ++ G   G G      +V     +       I  + +      +  LE ++KL +  
Sbjct: 151 KNVLIDGV-LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ- 208

Query: 55  FDNVIFHQLDVAD--PAAIHSVADFIRSHFGK------LDIL--VNNAGI---------- 94
            D     + D +      IHS+   +R           L +L  V NA            
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKI 268

Query: 95  ---TGISSDADTLSGFIEEGVARGKMTQTYESAE-KCLQTNYLGAK------RMCE---- 140
              T      D LS      ++    + T    E K L   YL  +       +      
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR 328

Query: 141 --ALIPLLQLSDSARIVN------------VSSSLGKL-------MY-----------VT 168
             ++I        A   N            + SSL  L       M+           + 
Sbjct: 329 RLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388

Query: 169 HE-----WAKGVFSDAENLTEERVDEVLSQYLNDYKEGSP-------ETKGWPANAAAYI 216
                  W   + SD   +  +     L +     KE +        E K    N  A  
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVE--KQPKESTISIPSIYLELKVKLENEYA-- 444

Query: 217 LSKAAMNAYTRILAKKYPNFCINCVCP---GY 245
           L ++ ++ Y   + K + +   + + P    Y
Sbjct: 445 LHRSIVDHYN--IPKTFDSD--DLIPPYLDQY 472

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 46.4 bits (111), Expect = 3e-06
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQ 62
           +   VV G ANK  I + + R L   G   + T   E+   ++V +L  +   ++ I   
Sbjct: 8   RN-IVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE-KSVHELAGTLDRNDSIILP 65

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
            DV + A I +    I+   G +  + +        ++ + L G
Sbjct: 66  CDVTNDAEIETCFASIKEQVGVIHGIAHCIAF----ANKEELVG 105

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 15/107 (14%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHS-GFDNVI 59
           K   V+ G ANK  I + V + L   G   + T    R  K     +EKL          
Sbjct: 33  KT-YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRK----ELEKLLEQLNQPEAH 87

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
            +Q+DV     + +  + I    G +D + ++       ++ + L G
Sbjct: 88  LYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAF----ANMEDLRG 130

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 45.3 bits (108), Expect = 8e-06
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 15/114 (13%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           KR  ++TG  +   I Y + +     G     T +  R +      + +     F + + 
Sbjct: 15  KR-ILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR----ITEFAAE-FGSELV 68

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVAR 114
              DVAD A I ++   +++H+  LD LV++ G     +  + ++G   +G+ R
Sbjct: 69  FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGF----APREAIAGDFLDGLTR 118

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 45.2 bits (108), Expect = 8e-06
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           KR  +VTG A+K  I Y + + +   G     T +++K     VE+       + I  Q 
Sbjct: 10  KR-ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLK-GRVEEFAAQ-LGSDIVLQC 66

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVAR 114
           DVA+ A+I ++   +   + K D  V++ G     +  D L G     V R
Sbjct: 67  DVAEDASIDTMFAELGKVWPKFDGFVHSIGF----APGDQLDGDYVNAVTR 113

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 10/111 (9%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
           K+  ++TG  +   I Y + + +   G     T   +      VEKL    F+       
Sbjct: 27  KK-ILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDR--VEKLCAE-FNPAAVLPC 82

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVAR 114
           DV     I  +   +   +  LD +V++       +  D L G   + V R
Sbjct: 83  DVISDQEIKDLFVELGKVWDGLDAIVHSIAF----APRDQLEGNFIDCVTR 129

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 15/106 (14%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           K+  ++ G AN   I Y + +     G     T L    EK     V  +     ++   
Sbjct: 7   KK-GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEK----RVRPIAQE-LNSPYV 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
           ++LDV+      S+ + ++   G LD +V++       +  + L G
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAF----APKEALEG 102

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 15/106 (14%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           K+ A+V G  N+  +G+ +  +L   G    ++    R         EKL  +     + 
Sbjct: 9   KK-ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRP----EAEKLAEA-LGGALL 62

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
            + DV     + ++   ++  FG LD LV+        +  + + G
Sbjct: 63  FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAF----APREAMEG 104

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 15/106 (14%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           KR  ++ G AN   I + + +     G     T      +K     VE L        + 
Sbjct: 32  KR-GLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKR----VEPLAEE-LGAFVA 85

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
              DVAD A+I +V + +   +GKLD LV+  G     SD D L+G
Sbjct: 86  GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGF----SDKDELTG 127

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 15/106 (14%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           KR A++TG AN+  I Y + +     G     T  T + EK     V ++    F + + 
Sbjct: 22  KR-ALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEK----RVREIAKG-FGSDLV 75

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
            + DV+    I ++  F+  ++G LDI+V++       +  +   G
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAY----APKEEFKG 117

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 15/106 (14%)

Query: 6   KRYAVVTG-ANK-GIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           K+  V+ G AN   + + + + +   G    +T L+   +K     V+ L  S     + 
Sbjct: 31  KK-GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR----VDPLAES-LGVKLT 84

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSG 106
              DV+D  ++ ++   +   +G LD +V+        SD + L G
Sbjct: 85  VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAF----SDKNELKG 126

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 6  KRYAVVTG-ANKG-IGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
          KR  +V+G      I + + R     G   VLT  D       ++++           +L
Sbjct: 8  KR-ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL---RLIQRITDRLPAKAPLLEL 63

Query: 64 DVADPAAIHSVADFIRSHFG---KLDILV 89
          DV +   + S+A  +    G   KLD +V
Sbjct: 64 DVQNEEHLASLAGRVTEAIGAGNKLDGVV 92

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 19/120 (15%)

Query: 5   AKRYAVVTGANKG-IGYEVVRQLALNGIITVL--TARDEKGGLEAVEKL--KHSGFDN-- 57
             +Y ++TGA KG IG EV++ L L G   V+  T+R  K   +  + +  K+    +  
Sbjct: 475 KDKYVLITGAGKGSIGAEVLQGL-LQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTL 533

Query: 58  --VIFHQLDVADPAAIHSVADFIRSHFGK------LDILVNNAGITGISSDADTLSGFIE 109
             V F+Q    D   + ++ +FI            LD ++  A I     + + +    E
Sbjct: 534 IVVPFNQGSKQD---VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSE 590

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	290
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.98
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.91
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.91
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.89
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.89
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.89
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.89
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.89
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.88
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.88
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.88
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.88
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.88
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.88
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.87
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.87
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.87
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.87
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.87
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.87
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.87
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.87
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.87
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.87
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.86
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.86
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.86
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.85
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.85
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.85
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.85
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.84
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.84
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.84
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.84
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.83
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.83
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.83
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.83
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.82
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.82
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.81
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.8
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.79
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.79
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.79
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.79
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.78
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.78
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.78
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.77
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.76
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.74
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.74
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.73
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.7
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.68
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.68
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.66
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.63
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.63
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.62
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.61
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.61
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.6
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.59
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.4
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.39
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.23
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.1
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.95
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.82
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.79
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.78
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.71
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.71
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.64
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.63
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.58
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.56
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.55
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.53
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.51
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.49
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.48
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.42
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.42
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.41
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.33
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.32
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.25
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.25
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.24
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.24
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.23
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.18
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.16
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.15
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.14
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.12
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.1
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.1
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.09
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.09
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.06
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.01
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.98
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.98
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.97
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.96
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.93
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.93
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.85
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.85
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.84
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.83
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.82
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.82
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.76
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.76
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.72
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.7
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.67
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.65
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.64
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.62
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.6
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.6
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.58
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.57
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.52
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.52
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.5
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.49
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.48
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.48
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.47
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.39
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.36
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.34
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.3
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.29
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.28
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.27
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.26
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.26
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.26
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.23
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.17
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.16
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.14
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.14
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.09
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.08
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.07
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.01
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.01
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.0
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.99
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.98
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.98
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.97
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.97
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.97
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.94
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.92
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.91
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	96.89
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.89
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.86
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.85
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.83
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.82
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.81
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.81
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.79
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.75
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.74
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.72
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.69
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.69
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.67
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	96.66
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.62
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.58
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.56
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.54
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.52
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.52
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.5
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.49
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.44
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.44
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.41
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.4
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.38
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.37
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.35
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.32
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.3
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.29
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.25
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.25
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.25
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.24
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.23
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.22
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.19
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	96.19
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.15
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.14
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.13
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.1
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.08
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	96.08
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.05
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.0
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.98
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.96
1lnq_A	336	MTHK channels, potassium channel related protein;	95.92
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.89
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.88
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.87
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.78
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	95.78
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.77
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.77
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.76
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.76
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.75
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.73
3aoe_E	419	Glutamate dehydrogenase; rossmann fold, NADH, oxid	95.68
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.66
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	95.65
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.62
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.58
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.55
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.54
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.53
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.51
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	95.51
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	95.49
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.48
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	95.47
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.45
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.43
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.42
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	95.4
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	95.36
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.35
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.35

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=9.1e-50  Score=346.35  Aligned_cols=227  Identities=26%  Similarity=0.278  Sum_probs=206.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++++++..++++..+ .++.+++||++|+++++++++++.++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG-KEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999997765 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ||+||+||||||+... .+..                +.+.++|++++++|+.|+|+++++++|+|++++.|+|||+||.
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~----------------~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~  145 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVA----------------EVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI  145 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             cCCCCEEEECCcccCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence            9999999999998643 2322                3499999999999999999999999999999889999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++..+|++||+|+.+|+|+||.|+  .||||
T Consensus       146 ~g~~~~-------------------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrV  182 (254)
T 4fn4_A          146 AGIRGG-------------------------------------------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA  182 (254)
T ss_dssp             GGTCSS-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhcCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence            998765                                           567899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+|+|+|....                   +..+|||+|..++||+++...+.+|+.+..+|.-
T Consensus       183 N~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG~  251 (254)
T 4fn4_A          183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGL  251 (254)
T ss_dssp             EEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCCc
Confidence            9999999999986542                   1248999999999999999999999999999864

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=3.8e-49  Score=342.62  Aligned_cols=226  Identities=23%  Similarity=0.266  Sum_probs=205.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      -+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.+++||++|+++++++++++.++
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG-YDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-CCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999999999999988765 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc-CCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~-~~~~~iV~isS~  160 (290)
                      +|+||+||||||+....+..+                .+.++|++++++|+.|+|+++++++|+|.+ +.+|+|||+||.
T Consensus        84 ~G~iDiLVNNAG~~~~~~~~~----------------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~  147 (255)
T 4g81_D           84 GIHVDILINNAGIQYRKPMVE----------------LELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL  147 (255)
T ss_dssp             TCCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             CCCCcEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence            999999999999876655443                499999999999999999999999999965 466899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++..+|++||+|+.+|+|+||.|+  .||||
T Consensus       148 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrV  184 (255)
T 4g81_D          148 TSQAAR-------------------------------------------PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT  184 (255)
T ss_dssp             GGTSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            998765                                           667899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+|+|+|.+..                 +..+|||+|..++||+++...+.+|+.+..+|.
T Consensus       185 N~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          185 NAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             EEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            9999999999986542                 234899999999999999999999999999885

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=1e-47  Score=336.61  Aligned_cols=222  Identities=22%  Similarity=0.249  Sum_probs=196.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++..++||++|+++++++++++.++|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~~~~  101 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI----GGGAVGIQADSANLAELDRLYEKVKAEA  101 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence            389999999999999999999999999999999999998888877776    2467889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |+||+||||||.....+..+                .+.++|++++++|+.|+|+++++++|+|++  +|+||++||..+
T Consensus       102 G~iDiLVNNAG~~~~~~~~~----------------~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~  163 (273)
T 4fgs_A          102 GRIDVLFVNAGGGSMLPLGE----------------VTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAG  163 (273)
T ss_dssp             SCEEEEEECCCCCCCCCTTS----------------CCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCChhh----------------ccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhh
Confidence            99999999999876655544                399999999999999999999999999975  589999999998


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+
T Consensus       164 ~~~~-------------------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~  200 (273)
T 4fgs_A          164 STGT-------------------------------------------PAFSVYAASKAALRSFARNWILDLKDRGIRINT  200 (273)
T ss_dssp             GSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEE
T ss_pred             ccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            8765                                           667899999999999999999999  4899999


Q ss_pred             eecceeecCcccCC----------------------CCCChhhhccchhhhhhccCCCCceeEeecCcccc
Q 039097          241 VCPGYVKTEMTYNA----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL  289 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~  289 (290)
                      |+||+|+|++....                      +..+|||+|+.++||+++...+.+|+.+..+|..+
T Consensus       201 V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             EEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTTT
T ss_pred             EeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEeECcChh
Confidence            99999999986543                      13489999999999999999999999999998753

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.2e-46  Score=328.08  Aligned_cols=224  Identities=26%  Similarity=0.287  Sum_probs=196.5

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |. +|+||++|||||++|||+++|++|+++|++|++++|+.++.+ ..+++...+ .++.++.||++|+++++++++++.
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~v~~~~   78 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQ-PRATYLPVELQDDAQCRDAVAQTI   78 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcC-CCEEEEEeecCCHHHHHHHHHHHH
Confidence            55 799999999999999999999999999999999999987754 445555554 358899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++||+||+||||||+....+.                 +.+.++|++++++|+.++|+++++++|+|+++ +|+|||+||
T Consensus        79 ~~~G~iDiLVNnAGi~~~~~~-----------------~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS  140 (258)
T 4gkb_A           79 ATFGRLDGLVNNAGVNDGIGL-----------------DAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISS  140 (258)
T ss_dssp             HHHSCCCEEEECCCCCCCCCT-----------------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECC
T ss_pred             HHhCCCCEEEECCCCCCCCCc-----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEee
Confidence            999999999999997643221                 33889999999999999999999999999765 499999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++..+|++||+|+.+|+|++|.|+  .|||
T Consensus       141 ~~~~~~~-------------------------------------------~~~~~Y~asKaav~~ltr~lA~ela~~gIr  177 (258)
T 4gkb_A          141 KTAVTGQ-------------------------------------------GNTSGYCASKGAQLALTREWAVALREHGVR  177 (258)
T ss_dssp             THHHHCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            9988765                                           677899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC----------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+|+|+|.+.+                      +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       178 VN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          178 VNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             EEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence            99999999999997642                      124899999999999999999999999999886

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=1.7e-46  Score=324.55  Aligned_cols=216  Identities=21%  Similarity=0.290  Sum_probs=189.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|+||||||++|||+++|++|+++|++|++++|+++.+++..++    . .++.+++||++|+++++++++++.+++|+|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~----~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE----R-PNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT----C-TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c-CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            59999999999999999999999999999999997665544332    2 358899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+||||||+....+..                +.+.++|++++++|+.++|++++++.|+|++++ |+|||+||..+..+
T Consensus        77 DiLVNNAG~~~~~~~~----------------~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~  139 (247)
T 3ged_A           77 DVLVNNACRGSKGILS----------------SLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQS  139 (247)
T ss_dssp             CEEEECCCCCCCCGGG----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSC
T ss_pred             CEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccC
Confidence            9999999987655443                348999999999999999999999999998764 99999999998876


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEeecc
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPG  244 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v~PG  244 (290)
                      .                                           ++..+|++||+|+.+|+|+||.|+ ++||||+|+||
T Consensus       140 ~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG  176 (247)
T 3ged_A          140 E-------------------------------------------PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPG  176 (247)
T ss_dssp             C-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEC
T ss_pred             C-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecC
Confidence            5                                           667899999999999999999999 79999999999


Q ss_pred             eeecCcccCC-----------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          245 YVKTEMTYNA-----------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       245 ~v~T~~~~~~-----------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+|++....           +..+|||+|+.++||+++  .+.+|+.+..+|.-
T Consensus       177 ~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VDGG~  229 (247)
T 3ged_A          177 WINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVDGGM  229 (247)
T ss_dssp             SBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTG
T ss_pred             cCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEECcCH
Confidence            9999997664           235999999999999973  58999999998863

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.3e-46  Score=324.19  Aligned_cols=218  Identities=26%  Similarity=0.305  Sum_probs=191.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|+..  ++..+++...+ .++..++||++|+++++++++     +
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDG-GNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTT-CCEEEEECCTTSTTTTTTSST-----T
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhC-CcEEEEEccCCCHHHHHHHHH-----h
Confidence            479999999999999999999999999999999999864  45566666555 468999999999999887764     4


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~~  161 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.|+|+++++++|+|+++ .+|+|||+||..
T Consensus        78 g~iDiLVNNAGi~~~~~~~~----------------~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~  141 (247)
T 4hp8_A           78 AGFDILVNNAGIIRRADSVE----------------FSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLL  141 (247)
T ss_dssp             TCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CCCCEEEECCCCCCCCCccc----------------ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechh
Confidence            89999999999976655443                3999999999999999999999999999766 468999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+.+|||+||.|+  .|||||
T Consensus       142 ~~~g~-------------------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN  178 (247)
T 4hp8_A          142 SFQGG-------------------------------------------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVN  178 (247)
T ss_dssp             GTSCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hCCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            98765                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|+|||.+..                 +.-+|||+|..++||+++...+.+|+.+..+|.
T Consensus       179 aV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          179 AIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             EEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence            999999999997542                 134899999999999999999999999999885

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.5e-45  Score=320.09  Aligned_cols=230  Identities=17%  Similarity=0.181  Sum_probs=205.3

Q ss_pred             CCcCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |.+|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+.+.+.++.++.+++||++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            8999999999999875  99999999999999999999999999998888888777667999999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .+++|++|+||||||+....+..            ....+.+.++|...+++|+.+++.+++.+.++++  ++|+||++|
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~------------~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnis  146 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLR------------GRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATT  146 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGT------------SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEE
T ss_pred             HHHhCCCCEEEeccccccccccc------------cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEe
Confidence            99999999999999986533221            1223458899999999999999999999999876  468999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+.+|+|+||.|+  .||
T Consensus       147 S~~~~~~~-------------------------------------------~~~~~Y~asKaal~~ltr~lA~Ela~~gI  183 (256)
T 4fs3_A          147 YLGGEFAV-------------------------------------------QNYNVMGVAKASLEANVKYLALDLGPDNI  183 (256)
T ss_dssp             CGGGTSCC-------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             ccccccCc-------------------------------------------ccchhhHHHHHHHHHHHHHHHHHhCccCe
Confidence            99988765                                           667899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |||+|+||+++|++.+...                 ..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       184 rVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          184 RVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             EEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            9999999999999977642                 34899999999999999889999999999885

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=8.4e-45  Score=323.68  Aligned_cols=289  Identities=58%  Similarity=0.899  Sum_probs=240.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   80 (290)
                      ..+++|++|||||++|||+++|++|+++|++|++++|+..+.++..+++...++.++.++.+|+++. ++++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3577999999999999999999999999999999999999999999999877767899999999998 999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCccc--------------chhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh
Q 039097           81 HFGKLDILVNNAGITGISSDADTLS--------------GFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL  146 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l  146 (290)
                      .++++|+||||||+...........              ............+.+.+++++++++|+.|++++++.++|+|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            9999999999999874321000000              00000112233455899999999999999999999999999


Q ss_pred             ccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHH
Q 039097          147 QLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYT  226 (290)
Q Consensus       147 ~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~  226 (290)
                      ++++.++||++||..+..+..........+.+...++..+++.....+..++........+++++...|++||+|+++++
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            98888999999999988765444334445666777888899999888888888888888888888899999999999999


Q ss_pred             HHHHhhCCCeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCccccC
Q 039097          227 RILAKKYPNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETLF  290 (290)
Q Consensus       227 ~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~~  290 (290)
                      ++|+.++++|+||+|+||+|.|+|.+..+..+++++++.+++++..++....|.+|..++.+.|
T Consensus       248 ~~la~e~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s~~a~~  311 (311)
T 3o26_A          248 RVLANKIPKFQVNCVCPGLVKTEMNYGIGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSELSAF  311 (311)
T ss_dssp             HHHHHHCTTSEEEEECCCSBCSGGGTTCCSBCHHHHHHHHHHHHTCCSSCCCSCEETC------
T ss_pred             HHHHhhcCCceEEEecCCceecCCcCCCCCCCHHHHHHHHHHHHhCCCCCCCceEeccccccCC
Confidence            9999999889999999999999999998889999999999999999998999999999988776

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.2e-45  Score=314.82  Aligned_cols=211  Identities=26%  Similarity=0.314  Sum_probs=182.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+++       ....++..++||++|+++++++++    +++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------~~~~~~~~~~~Dv~~~~~v~~~~~----~~g   77 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------PRHPRIRREELDITDSQRLQRLFE----ALP   77 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------CCCTTEEEEECCTTCHHHHHHHHH----HCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------hhcCCeEEEEecCCCHHHHHHHHH----hcC
Confidence            589999999999999999999999999999999999876543       223468999999999999888775    579


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||+..+  .                .+.+.++|++++++|+.++|+++++++|+|+++ +|+|||+||..+.
T Consensus        78 ~iDiLVNNAGi~~~--~----------------~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~  138 (242)
T 4b79_A           78 RLDVLVNNAGISRD--R----------------EEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYST  138 (242)
T ss_dssp             CCSEEEECCCCCCG--G----------------GGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCC--c----------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeecccc
Confidence            99999999997532  1                134889999999999999999999999999765 5999999999998


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+|
T Consensus       139 ~~~-------------------------------------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV  175 (242)
T 4b79_A          139 FGS-------------------------------------------ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAI  175 (242)
T ss_dssp             SCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             CCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            765                                           667899999999999999999999  48999999


Q ss_pred             ecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+|||.+...                 ..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       176 ~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          176 APGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             EECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence            99999999976631                 34899999999999999999999999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.5e-45  Score=320.40  Aligned_cols=220  Identities=24%  Similarity=0.310  Sum_probs=190.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|+..+.           ..+..++++|++++++++++++++.++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------LPEELFVEADLTTKEGCAIVAEATRQR   75 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------SCTTTEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            368999999999999999999999999999999999986431           123457899999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +|++|+||||||+......              .+.+.+.++|++++++|+.++|+++++++|+|++++.|+||++||..
T Consensus        76 ~G~iDilVnnAG~~~~~~~--------------~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~  141 (261)
T 4h15_A           76 LGGVDVIVHMLGGSSAAGG--------------GFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQ  141 (261)
T ss_dssp             TSSCSEEEECCCCCCCCSS--------------CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCccCCC--------------CcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehh
Confidence            9999999999997643211              11234899999999999999999999999999998889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                          |.+...|++||+|+.+|+|+||.|+  .|||||
T Consensus       142 ~~~~~------------------------------------------~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN  179 (261)
T 4h15_A          142 RVLPL------------------------------------------PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVV  179 (261)
T ss_dssp             GTSCC------------------------------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            87654                                          2356889999999999999999999  489999


Q ss_pred             EeecceeecCcccCC-----------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-----------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|++....                             +..+|||+|+.++||+++...+.+|+.+..+|..
T Consensus       180 ~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          180 RVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             EEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            999999999975321                             1348999999999999999999999999998863

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-43  Score=310.58  Aligned_cols=229  Identities=27%  Similarity=0.269  Sum_probs=205.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..++.++.+|++|+++++++++++.+
T Consensus         5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (262)
T 3pk0_A            5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVE   84 (262)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999999999888888776656799999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++||++||.
T Consensus        85 ~~g~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~  148 (262)
T 3pk0_A           85 EFGGIDVVCANAGVFPDAPLAT----------------MTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSI  148 (262)
T ss_dssp             HHSCCSEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCS
T ss_pred             HhCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEech
Confidence            9999999999999876554433                389999999999999999999999999998888999999999


Q ss_pred             CCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      .+. .+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       149 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~  185 (262)
T 3pk0_A          149 TGPITGY-------------------------------------------PGWSHYGATKAAQLGFMRTAAIELAPHKIT  185 (262)
T ss_dssp             BTTTBCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhccCCC-------------------------------------------CCChhhHHHHHHHHHHHHHHHHHHHhhCcE
Confidence            875 433                                           566899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++....               ...+|||+|+.++|++++.....+|+.+..++..
T Consensus       186 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~  251 (262)
T 3pk0_A          186 VNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAIAVDGGQ  251 (262)
T ss_dssp             EEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCe
Confidence            99999999999975442               2358999999999999988889999999988754

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.1e-43  Score=309.34  Aligned_cols=230  Identities=26%  Similarity=0.312  Sum_probs=199.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence            677889999999999999999999999999999999999988888888886544 4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+... .+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS  165 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPID----------------DLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSS  165 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTT----------------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HhCCCCEEEECCCCCCCCCchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcC
Confidence            99999999999998643 3332                338999999999999999999999999999888899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+.....                                         .++...|++||+|+++++++++.|+  .+|+
T Consensus       166 ~~~~~~~~-----------------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  204 (283)
T 3v8b_A          166 INGTRTFT-----------------------------------------TPGATAYTATKAAQVAIVQQLALELGKHHIR  204 (283)
T ss_dssp             SBTTTBCC-----------------------------------------STTCHHHHHHHHHHHHHHHHHHHHTTTTTEE
T ss_pred             hhhccCCC-----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhCccCcE
Confidence            98865210                                         1457899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|+|++....                        ...+|||+|+.+++++++.....+|+.+..+|..
T Consensus       205 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          205 VNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             EEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             EEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcCc
Confidence            99999999999986542                        1237899999999999988889999999998763

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=6.5e-43  Score=306.14  Aligned_cols=227  Identities=24%  Similarity=0.242  Sum_probs=203.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... ...++.++.+|++|.++++++++++.+.
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            688999999999999999999999999999999999999988888888764 3345999999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++||++||..
T Consensus        85 ~g~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  148 (265)
T 3lf2_A           85 LGCASILVNNAGQGRVSTFAE----------------TTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLL  148 (265)
T ss_dssp             HCSCSEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGG
T ss_pred             cCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcc
Confidence            999999999999875544433                3899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       149 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  185 (265)
T 3lf2_A          149 ASQPE-------------------------------------------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVN  185 (265)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             cCCCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            87764                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC---------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++....                           +..+|||+|+.+++++++.....+|+.+..++..
T Consensus       186 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  261 (265)
T 3lf2_A          186 GILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASPLSAYTTGSHIDVSGGL  261 (265)
T ss_dssp             EEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSC
T ss_pred             EEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCC
Confidence            999999999874321                           1248999999999999988889999999998864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=8.1e-43  Score=307.89  Aligned_cols=228  Identities=27%  Similarity=0.324  Sum_probs=199.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------cccHHHHHHHHHhcCCCcEEEEEeeCCCH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD------------EKGGLEAVEKLKHSGFDNVIFHQLDVADP   68 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~   68 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...+ .++.++.+|++|+
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~   83 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG-RRCISAKVDVKDR   83 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC-CeEEEEeCCCCCH
Confidence            778999999999999999999999999999999999997            334445555554443 5699999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL  148 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~  148 (290)
                      ++++++++++.+.++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~  147 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIALLPE----------------VESAQWDEVIGTNLTGTFNTIAAVAPGMIK  147 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTC----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999876554433                389999999999999999999999999998


Q ss_pred             CCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          149 SDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       149 ~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                      ++.|+||++||..+..+.                                           ++...|++||+|+++|+++
T Consensus       148 ~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~  184 (281)
T 3s55_A          148 RNYGRIVTVSSMLGHSAN-------------------------------------------FAQASYVSSKWGVIGLTKC  184 (281)
T ss_dssp             HTCEEEEEECCGGGGSCC-------------------------------------------TTCHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECChhhcCCC-------------------------------------------CCCchhHHHHHHHHHHHHH
Confidence            888999999999887654                                           5668999999999999999


Q ss_pred             HHhhC--CCeEEEEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhccCCC
Q 039097          229 LAKKY--PNFCINCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHKGG  276 (290)
Q Consensus       229 la~e~--~~i~vn~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~~~  276 (290)
                      ++.|+  .+|+||+|+||+|.|++.+.                              .+..+|||+|+.+++++++....
T Consensus       185 la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~  264 (281)
T 3s55_A          185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSH  264 (281)
T ss_dssp             HHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccC
Confidence            99999  48999999999999998652                              12348999999999999998889


Q ss_pred             CceeEeecCccc
Q 039097          277 PSGLFFSRKEET  288 (290)
Q Consensus       277 ~~g~~~~~~~~~  288 (290)
                      .+|+.+..++..
T Consensus       265 itG~~i~vdgG~  276 (281)
T 3s55_A          265 ITGTVLPIDAGA  276 (281)
T ss_dssp             CCSCEEEESTTG
T ss_pred             CCCCEEEECCCc
Confidence            999999988764

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=2.7e-43  Score=305.74  Aligned_cols=225  Identities=29%  Similarity=0.353  Sum_probs=200.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+++.+++..+++..    ...++.+|++|+++++++++++.+
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD----NGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cceEEEEeCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999998888777766642    477899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||.
T Consensus        80 ~~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~  143 (248)
T 3op4_A           80 EFGGVDILVNNAGITRDNLLM----------------RMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSV  143 (248)
T ss_dssp             HHCCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcch
Confidence            999999999999987654433                3389999999999999999999999999998888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+  .+|+|
T Consensus       144 ~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v  180 (248)
T 3op4_A          144 VGTMGN-------------------------------------------AGQANYAAAKAGVIGFTKSMAREVASRGVTV  180 (248)
T ss_dssp             HHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhcCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEE
Confidence            877654                                           567899999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++.+..               ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       181 n~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG~  245 (248)
T 3op4_A          181 NTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGM  245 (248)
T ss_dssp             EEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCe
Confidence            9999999999997653               1358999999999999988889999999998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=8.3e-43  Score=309.94  Aligned_cols=229  Identities=27%  Similarity=0.280  Sum_probs=205.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..++.++.+|++|.++++++++++.+
T Consensus        36 m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  115 (293)
T 3rih_A           36 MFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVD  115 (293)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999999999998888776656799999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|.|++++.++||++||.
T Consensus       116 ~~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~  179 (293)
T 3rih_A          116 AFGALDVVCANAGIFPEARLDT----------------MTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSI  179 (293)
T ss_dssp             HHSCCCEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCS
T ss_pred             HcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeCh
Confidence            9999999999999876544433                389999999999999999999999999998888999999999


Q ss_pred             CCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      .+. .+.                                           ++...|++||+|+++|+++++.|+  .+|+
T Consensus       180 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  216 (293)
T 3rih_A          180 TGPVTGY-------------------------------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVT  216 (293)
T ss_dssp             BTTTBBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhccCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeE
Confidence            875 433                                           456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|.|++....               ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       217 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~  282 (293)
T 3rih_A          217 VNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGGQ  282 (293)
T ss_dssp             EEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            99999999999875432               1348999999999999988889999999988764

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=9.5e-43  Score=307.38  Aligned_cols=227  Identities=27%  Similarity=0.298  Sum_probs=198.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-------------CcccHHHHHHHHHhcCCCcEEEEEeeCCC
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-------------DEKGGLEAVEKLKHSGFDNVIFHQLDVAD   67 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~   67 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|             +.+++++..+++...+ .++.++.+|++|
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~   88 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLDVRD   88 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTC
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcCCCC
Confidence            56799999999999999999999999999999999998             4555666666665543 568999999999


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ  147 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~  147 (290)
                      .++++++++++.++++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|+
T Consensus        89 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~  152 (280)
T 3pgx_A           89 DAALRELVADGMEQFGRLDVVVANAGVLSWGRVW----------------ELTDEQWDTVIGVNLTGTWRTLRATVPAMI  152 (280)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999987654433                338999999999999999999999999998


Q ss_pred             cCC-CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHH
Q 039097          148 LSD-SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYT  226 (290)
Q Consensus       148 ~~~-~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~  226 (290)
                      +++ .|+||++||..+..+.                                           ++...|++||+|+++|+
T Consensus       153 ~~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~  189 (280)
T 3pgx_A          153 EAGNGGSIVVVSSSAGLKAT-------------------------------------------PGNGHYSASKHGLTALT  189 (280)
T ss_dssp             HHCSCEEEEEECCGGGTSCC-------------------------------------------TTBHHHHHHHHHHHHHH
T ss_pred             hcCCCCEEEEEcchhhccCC-------------------------------------------CCchhHHHHHHHHHHHH
Confidence            765 6899999999887654                                           56789999999999999


Q ss_pred             HHHHhhC--CCeEEEEeecceeecCcccC------------------------CCCCChhhhccchhhhhhccCCCCcee
Q 039097          227 RILAKKY--PNFCINCVCPGYVKTEMTYN------------------------AGRLTVEEGAESPVWLALLHKGGPSGL  280 (290)
Q Consensus       227 ~~la~e~--~~i~vn~v~PG~v~T~~~~~------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~  280 (290)
                      ++++.|+  .+|+||+|+||++.|++...                        .+..+|||+|+.+++++++.....+|+
T Consensus       190 ~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~  269 (280)
T 3pgx_A          190 NTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGT  269 (280)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSC
T ss_pred             HHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCC
Confidence            9999998  48999999999999998653                        113489999999999999988899999


Q ss_pred             EeecCcc
Q 039097          281 FFSRKEE  287 (290)
Q Consensus       281 ~~~~~~~  287 (290)
                      .+..++.
T Consensus       270 ~i~vdGG  276 (280)
T 3pgx_A          270 QIPVDKG  276 (280)
T ss_dssp             EEEESTT
T ss_pred             EEEECCC
Confidence            9988875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.1e-43  Score=309.50  Aligned_cols=229  Identities=27%  Similarity=0.301  Sum_probs=203.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++|.++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999999999888888888764445799999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      +++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++ .++||++||
T Consensus        95 ~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS  158 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHPQPVVD----------------TDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVAS  158 (266)
T ss_dssp             HHTSCSEEEEECCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcc
Confidence            9999999999999876544333                38999999999999999999999999998765 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++|+++++.|+  .+|+
T Consensus       159 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gI~  195 (266)
T 4egf_A          159 AAALAPL-------------------------------------------PDHYAYCTSKAGLVMATKVLARELGPHGIR  195 (266)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhhccCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhhCeE
Confidence            9887654                                           567899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|.|++.+..                 ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       196 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 4egf_A          196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGVDIPVDGGY  263 (266)
T ss_dssp             EEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCCc
Confidence            99999999999985431                 2358999999999999988889999999988764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=7.1e-43  Score=304.48  Aligned_cols=226  Identities=26%  Similarity=0.305  Sum_probs=202.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999988888888886654 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+. +                .+.++|++++++|+.++++++++++|+|++++.|+||++||..
T Consensus        87 ~g~id~lv~nAg~~~~~~~-~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  149 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPF-D----------------MPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMA  149 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCT-T----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCC-C----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHH
Confidence            9999999999998765443 2                3889999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       150 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn  186 (256)
T 3gaf_A          150 GENTN-------------------------------------------VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN  186 (256)
T ss_dssp             GTCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence            87654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....                ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       187 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG~  251 (256)
T 3gaf_A          187 AIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGG  251 (256)
T ss_dssp             EEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccCCEEEECCCc
Confidence            999999999985431                2358999999999999988889999999988764

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.2e-42  Score=302.19  Aligned_cols=227  Identities=27%  Similarity=0.343  Sum_probs=202.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeC--CCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV--ADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~~~   80 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..++.++.+|+  ++.++++++++++.+
T Consensus         9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A            9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999988888888766655688999999  999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+... .+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS  152 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMS----------------EQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSS  152 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTT----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             hCCCCCEEEECCccCCCCCCcc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence            99999999999998643 2322                238999999999999999999999999999888899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCI  238 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~v  238 (290)
                      ..+..+.                                           ++...|++||+|+++|+++++.|+ +.|+|
T Consensus       153 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~irv  189 (252)
T 3f1l_A          153 SVGRQGR-------------------------------------------ANWGAYAASKFATEGMMQVLADEYQQRLRV  189 (252)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEE
T ss_pred             hhhccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCcEE
Confidence            9887654                                           567899999999999999999999 45999


Q ss_pred             EEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+++|++....       ...+|+|+|+.++|++++.....+|+.+..++..
T Consensus       190 n~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG~  246 (252)
T 3f1l_A          190 NCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPGR  246 (252)
T ss_dssp             EEEECCSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC-
T ss_pred             EEEecCcccCchhhhhCCccchhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCCc
Confidence            9999999999985432       2358999999999999998889999999998864

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=6.3e-43  Score=307.37  Aligned_cols=228  Identities=22%  Similarity=0.271  Sum_probs=204.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVG-HDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT-CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999999999888888887654 4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||.
T Consensus       100 ~~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~  163 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRKPMI----------------ELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSL  163 (271)
T ss_dssp             HTCCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             HCCCCCEEEECCCCCCCCCch----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccH
Confidence            999999999999987554433                3389999999999999999999999999998888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++|+++++.|+  .+|+|
T Consensus       164 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  200 (271)
T 4ibo_A          164 TSELAR-------------------------------------------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQA  200 (271)
T ss_dssp             GGTSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HhCCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEE
Confidence            887654                                           567899999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++.+..                 ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       201 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  267 (271)
T 4ibo_A          201 NAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGGM  267 (271)
T ss_dssp             EEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCCe
Confidence            9999999999986532                 2358999999999999988889999999988864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-42  Score=305.37  Aligned_cols=227  Identities=23%  Similarity=0.249  Sum_probs=198.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-------------CcccHHHHHHHHHhcCCCcEEEEEeeCCCH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-------------DEKGGLEAVEKLKHSGFDNVIFHQLDVADP   68 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~   68 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|             +.+.+++..+++...+ .++.++.+|++|.
T Consensus         7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~   85 (277)
T 3tsc_A            7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN-RRIVAAVVDTRDF   85 (277)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCH
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCH
Confidence            3689999999999999999999999999999999998             4555556666655443 4689999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL  148 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~  148 (290)
                      ++++++++++.++++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++
T Consensus        86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~  149 (277)
T 3tsc_A           86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWD----------------DITPEDFRDVMDINVTGTWNTVMAGAPRIIE  149 (277)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999987654332                3389999999999999999999999999987


Q ss_pred             CC-CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 039097          149 SD-SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR  227 (290)
Q Consensus       149 ~~-~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~  227 (290)
                      ++ .|+||++||..+..+.                                           ++...|++||+|+++|++
T Consensus       150 ~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~  186 (277)
T 3tsc_A          150 GGRGGSIILISSAAGMKMQ-------------------------------------------PFMIHYTASKHAVTGLAR  186 (277)
T ss_dssp             HTSCEEEEEECCGGGTSCC-------------------------------------------SSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEccHhhCCCC-------------------------------------------CCchhhHHHHHHHHHHHH
Confidence            65 6899999999887654                                           567899999999999999


Q ss_pred             HHHhhC--CCeEEEEeecceeecCcccC-------------------------CCCCChhhhccchhhhhhccCCCCcee
Q 039097          228 ILAKKY--PNFCINCVCPGYVKTEMTYN-------------------------AGRLTVEEGAESPVWLALLHKGGPSGL  280 (290)
Q Consensus       228 ~la~e~--~~i~vn~v~PG~v~T~~~~~-------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~  280 (290)
                      +|+.|+  .+|+||+|+||+|+|++...                         ....+|||+|+.++|++++.....+|+
T Consensus       187 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~  266 (277)
T 3tsc_A          187 AFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAA  266 (277)
T ss_dssp             HHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCC
Confidence            999999  48999999999999998643                         013589999999999999998899999


Q ss_pred             EeecCccc
Q 039097          281 FFSRKEET  288 (290)
Q Consensus       281 ~~~~~~~~  288 (290)
                      .+..++..
T Consensus       267 ~i~vdGG~  274 (277)
T 3tsc_A          267 QIPVDQGS  274 (277)
T ss_dssp             EEEESTTG
T ss_pred             EEeeCCCc
Confidence            99988753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=8.1e-43  Score=302.56  Aligned_cols=225  Identities=24%  Similarity=0.299  Sum_probs=200.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++|.++++++++++.+
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   76 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI----GKKARAIAADISDPGSVKALFAEIQA   76 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999999988887777666    34689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      .++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++ .++||++||
T Consensus        77 ~~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  140 (247)
T 3rwb_A           77 LTGGIDILVNNASIVPFVAWD----------------DVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIAS  140 (247)
T ss_dssp             HHSCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             HCCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence            999999999999987544433                338999999999999999999999999998765 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++|+++++.|+  .+|+
T Consensus       141 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  177 (247)
T 3rwb_A          141 NTFFAGT-------------------------------------------PNMAAYVAAKGGVIGFTRALATELGKYNIT  177 (247)
T ss_dssp             THHHHTC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhhccCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            9877654                                           567899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+++|++....                +..+|||+|+.+++++++.....+|+.+..++..
T Consensus       178 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~  244 (247)
T 3rwb_A          178 ANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQTLNVDAGM  244 (247)
T ss_dssp             EEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            99999999999975432                2348999999999999998889999999988753

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-42  Score=306.13  Aligned_cols=228  Identities=25%  Similarity=0.292  Sum_probs=201.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence            557899999999999999999999999999999999999998888888876543 4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+... .+..                +.+.++|++++++|+.|+++++++++|+|++++.|+||++||
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS  145 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEIS----------------SLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSS  145 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             HcCCCCEEEECCCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            99999999999998643 2222                348999999999999999999999999999888899999999


Q ss_pred             CCCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          160 SLGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       160 ~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      ..+. .+.                                           ++...|++||+|+++|+++++.|+  .+|
T Consensus       146 ~~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI  182 (280)
T 3tox_A          146 FVGHTAGF-------------------------------------------AGVAPYAASKAGLIGLVQALAVELGARGI  182 (280)
T ss_dssp             SBTTTBCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             hhhCcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCe
Confidence            9886 332                                           456899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccC-C------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYN-A------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~-~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||+|.|++... .                  ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       183 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  253 (280)
T 3tox_A          183 RVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVTGAALLADGGA  253 (280)
T ss_dssp             EEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCCc
Confidence            99999999999998643 1                  1348999999999999988889999999998864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=2.5e-42  Score=305.56  Aligned_cols=228  Identities=21%  Similarity=0.244  Sum_probs=197.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC----------------cccHHHHHHHHHhcCCCcEEEEEeeC
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD----------------EKGGLEAVEKLKHSGFDNVIFHQLDV   65 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~Dl   65 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+                .+++++..+++...+ .++.++.+|+
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv   85 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDV   85 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCC
Confidence            36889999999999999999999999999999999987                444555555555443 4699999999


Q ss_pred             CCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchh
Q 039097           66 ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL  145 (290)
Q Consensus        66 ~~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~  145 (290)
                      +|+++++++++++.++++++|+||||||+.......               .+.+.++|++++++|+.++++++++++|+
T Consensus        86 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~---------------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~  150 (286)
T 3uve_A           86 RDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTL---------------DKTSEEDWTEMIDINLAGVWKTVKAGVPH  150 (286)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCG---------------GGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCcc---------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            999999999999999999999999999987543311               23389999999999999999999999999


Q ss_pred             hccCC-CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHH
Q 039097          146 LQLSD-SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNA  224 (290)
Q Consensus       146 l~~~~-~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~  224 (290)
                      |+++. .|+||++||..+..+.                                           ++...|++||+|+++
T Consensus       151 ~~~~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~  187 (286)
T 3uve_A          151 MIAGGRGGSIILTSSVGGLKAY-------------------------------------------PHTGHYVAAKHGVVG  187 (286)
T ss_dssp             HHHHTSCEEEEEECCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             HHhCCCCcEEEEECchhhccCC-------------------------------------------CCccHHHHHHHHHHH
Confidence            98765 6899999999887754                                           567899999999999


Q ss_pred             HHHHHHhhC--CCeEEEEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhc
Q 039097          225 YTRILAKKY--PNFCINCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALL  272 (290)
Q Consensus       225 ~~~~la~e~--~~i~vn~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~  272 (290)
                      |+++|+.|+  .+|+||+|+||+|.|+|.+.                              .+..+|||+|+.++|++++
T Consensus       188 ~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~  267 (286)
T 3uve_A          188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASD  267 (286)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCc
Confidence            999999998  48999999999999998753                              1234899999999999998


Q ss_pred             cCCCCceeEeecCccc
Q 039097          273 HKGGPSGLFFSRKEET  288 (290)
Q Consensus       273 ~~~~~~g~~~~~~~~~  288 (290)
                      .....+|+.+..++..
T Consensus       268 ~a~~itG~~i~vdGG~  283 (286)
T 3uve_A          268 EARYITGVTLPIDAGS  283 (286)
T ss_dssp             GGTTCCSCEEEESTTG
T ss_pred             cccCCcCCEEeECCcc
Confidence            8889999999998864

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-42  Score=306.84  Aligned_cols=229  Identities=25%  Similarity=0.356  Sum_probs=198.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++....+.++.++.+|++|.++++++++++.
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   99 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVA   99 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            56889999999999999999999999999999999999 55667777777766555679999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.|+||++||
T Consensus       100 ~~~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS  163 (281)
T 3v2h_A          100 DRFGGADILVNNAGVQFVEKIE----------------DFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIAS  163 (281)
T ss_dssp             HHTSSCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHCCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            9999999999999987544433                338999999999999999999999999999888899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       164 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  200 (281)
T 3v2h_A          164 AHGLVAS-------------------------------------------PFKSAYVAAKHGIMGLTKTVALEVAESGVT  200 (281)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             cccccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            9887654                                           566899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC---------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++....                           ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       201 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~  278 (281)
T 3v2h_A          201 VNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGGW  278 (281)
T ss_dssp             EEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred             EEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence            99999999999985431                           1348999999999999988888999999988764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=5.1e-42  Score=305.62  Aligned_cols=227  Identities=23%  Similarity=0.259  Sum_probs=198.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------cccHHHHHHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD------------EKGGLEAVEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+            .+++++..+++...+ .++.++++|++|.++
T Consensus        25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQVDVRDFDA  103 (299)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCHHH
Confidence            6889999999999999999999999999999999987            455666666665544 469999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD  150 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~  150 (290)
                      ++++++++.+.++++|+||||||+.......               .+.+.++|++++++|+.++++++++++|+|+++.
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~---------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~  168 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEGTRL---------------NRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGK  168 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCCT---------------TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCCCch---------------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999987544311               2338999999999999999999999999987764


Q ss_pred             -CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          151 -SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       151 -~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                       .|+||++||..+..+.                                           ++...|++||+|+++|++++
T Consensus       169 ~~g~Iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~l  205 (299)
T 3t7c_A          169 RGGSIVFTSSIGGLRGA-------------------------------------------ENIGNYIASKHGLHGLMRTM  205 (299)
T ss_dssp             SCEEEEEECCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECChhhccCC-------------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence             6899999999887654                                           56789999999999999999


Q ss_pred             HhhC--CCeEEEEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhccCCCC
Q 039097          230 AKKY--PNFCINCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHKGGP  277 (290)
Q Consensus       230 a~e~--~~i~vn~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~~~~  277 (290)
                      +.|+  .+|+||+|+||+|+|++...                              .+..+|||+|+.+++++++.....
T Consensus       206 a~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~i  285 (299)
T 3t7c_A          206 ALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYI  285 (299)
T ss_dssp             HHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccC
Confidence            9999  38999999999999998653                              123489999999999999888899


Q ss_pred             ceeEeecCccc
Q 039097          278 SGLFFSRKEET  288 (290)
Q Consensus       278 ~g~~~~~~~~~  288 (290)
                      +|+.+..++..
T Consensus       286 tG~~i~vdGG~  296 (299)
T 3t7c_A          286 TGVSLPVDGGA  296 (299)
T ss_dssp             CSCEEEESTTG
T ss_pred             cCCEEeeCCCc
Confidence            99999998864

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.6e-42  Score=300.44  Aligned_cols=225  Identities=24%  Similarity=0.290  Sum_probs=200.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|++|||||++|||+++|++|+++|++|+++ +|+.+.+++..+++...+ .++.++.+|++|.++++++++++.+++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-VKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999997 888888888888776544 469999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus        81 g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~  144 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVM----------------ELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGS  144 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGG
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh
Confidence            9999999999976544433                338999999999999999999999999999888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++|+++++.|+  .+|+||+
T Consensus       145 ~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~  181 (258)
T 3oid_A          145 IRYL-------------------------------------------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNA  181 (258)
T ss_dssp             TSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEE
T ss_pred             CCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            7654                                           567899999999999999999999  4899999


Q ss_pred             eecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|++.+...                 ..+|||+|+.+++++++.....+|+.+..++..
T Consensus       182 v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG~  246 (258)
T 3oid_A          182 VSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGGR  246 (258)
T ss_dssp             EEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTTG
T ss_pred             EeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence            999999999876532                 358999999999999988889999999988764

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.8e-42  Score=303.67  Aligned_cols=225  Identities=27%  Similarity=0.341  Sum_probs=193.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++|+++++++++++.+
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL----GKDVFVFSANLSDRKSIKQLAEVAER   97 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            67889999999999999999999999999999999999988777766554    34689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|.|++++.|+||++||.
T Consensus        98 ~~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~  161 (266)
T 3grp_A           98 EMEGIDILVNNAGITRDGLFVR----------------MQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSI  161 (266)
T ss_dssp             HHTSCCEEEECCCCC-----CC----------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             HcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCH
Confidence            9999999999999875544333                388999999999999999999999999998888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+  .+|+|
T Consensus       162 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~v  198 (266)
T 3grp_A          162 VGVVGN-------------------------------------------PGQTNYCAAKAGLIGFSKALAQEIASRNITV  198 (266)
T ss_dssp             --------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HHcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence            887654                                           567899999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++.+..               ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       199 n~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3grp_A          199 NCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTLHINGGM  263 (266)
T ss_dssp             EEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            9999999999986543               1347999999999999988889999999998764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-42  Score=301.86  Aligned_cols=221  Identities=24%  Similarity=0.345  Sum_probs=191.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            678999999999999999999999999999999999998888888887654 4688999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.|+||++||..+.
T Consensus        81 ~iD~lVnnAG~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~  144 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLA----------------AVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGAL  144 (264)
T ss_dssp             CCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHc
Confidence            999999999987544433                3389999999999999999999999999998888999999999887


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .+.                                           ++...|++||+|+++|+++++.|+++|+||+|+|
T Consensus       145 ~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~P  181 (264)
T 3tfo_A          145 SVV-------------------------------------------PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNP  181 (264)
T ss_dssp             CCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEE
T ss_pred             ccC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            654                                           5678999999999999999999999999999999


Q ss_pred             ceeecCcccCCC--------------CCChhhhccchhhhhhccCCCCceeEeec
Q 039097          244 GYVKTEMTYNAG--------------RLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       244 G~v~T~~~~~~~--------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      |+|+|++.....              +.+|||+|+.++++++.+....+|.++-.
T Consensus       182 G~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~  236 (264)
T 3tfo_A          182 GVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQVIEAPQSVDTTEITIR  236 (264)
T ss_dssp             CCC-----------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred             CCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCCccCccceEEEe
Confidence            999999865421              36899999999999999887777766543

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=6.8e-42  Score=298.15  Aligned_cols=222  Identities=25%  Similarity=0.296  Sum_probs=196.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++.++.+|++|.++++++++++.+
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999988877766665    24689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++  .|+||++||.
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~  140 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFD----------------QVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSV  140 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCG
T ss_pred             HhCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECCh
Confidence            999999999999987544433                3389999999999999999999999999975  5899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+  .+|+|
T Consensus       141 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  177 (255)
T 4eso_A          141 ADEGGH-------------------------------------------PGMSVYSASKAALVSFASVLAAELLPRGIRV  177 (255)
T ss_dssp             GGSSBC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEE
T ss_pred             hhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence            887764                                           567899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+++|++....                     +..+|||+|+.+++++++ ....+|+.+..++..
T Consensus       178 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGG~  247 (255)
T 4eso_A          178 NSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAKLAVDGGL  247 (255)
T ss_dssp             EEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTCCSCEEEESTTT
T ss_pred             EEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCccCCEEEECCCc
Confidence            9999999999986531                     124899999999999997 778999999988764

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=6.2e-42  Score=298.65  Aligned_cols=227  Identities=19%  Similarity=0.223  Sum_probs=199.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+|++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|+++++++++++.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999998888888876544 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh-ccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL-QLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l-~~~~~~~iV~isS~  160 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+| ++...++||++||.
T Consensus        81 ~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  144 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAE----------------DLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVAT  144 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCG
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECch
Confidence            99999999999986544433                33899999999999999999999999999 44557899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC---CeE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP---NFC  237 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~---~i~  237 (290)
                      .+..+.                                           ++...|++||+|+++|+++++.|+.   +|+
T Consensus       145 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIr  181 (257)
T 3imf_A          145 YAWDAG-------------------------------------------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR  181 (257)
T ss_dssp             GGGSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             hhccCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhccccCeE
Confidence            887654                                           5678999999999999999999983   899


Q ss_pred             EEEeecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|.|++....                  +..+|||+|+.+++++++.....+|+.+..++..
T Consensus       182 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  250 (257)
T 3imf_A          182 VNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGGQ  250 (257)
T ss_dssp             EEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCCc
Confidence            99999999999964321                  1348999999999999988889999999988864

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.1e-42  Score=300.05  Aligned_cols=225  Identities=23%  Similarity=0.241  Sum_probs=198.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++++|++|+++++++++++.+
T Consensus         3 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            3 MKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI----GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999988887777666    24588999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++ .|+||++||
T Consensus        79 ~~g~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  142 (259)
T 4e6p_A           79 HAGGLDILVNNAALFDLAPIV----------------EITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMAS  142 (259)
T ss_dssp             HSSSCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECC
Confidence            999999999999987554433                338999999999999999999999999998765 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       143 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  179 (259)
T 4e6p_A          143 QAGRRGE-------------------------------------------ALVAIYCATKAAVISLTQSAGLDLIKHRIN  179 (259)
T ss_dssp             GGGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhhccCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCCE
Confidence            9887654                                           567899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++.+..                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       180 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~  256 (259)
T 4e6p_A          180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGGN  256 (259)
T ss_dssp             EEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTS
T ss_pred             EEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcCh
Confidence            99999999999975421                          2359999999999999988889999999988764

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2e-42  Score=304.09  Aligned_cols=226  Identities=28%  Similarity=0.381  Sum_probs=202.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ .++.++.+|++|.++++++++++.+++
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG-LEGRGAVLNVNDATAVDALVESTLKEF  103 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            5889999999999999999999999999999999999988888888876654 358889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.++++++++++|.|++++.|+||++||..+
T Consensus       104 g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  167 (270)
T 3ftp_A          104 GALNVLVNNAGITQDQLAMR----------------MKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG  167 (270)
T ss_dssp             SCCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh
Confidence            99999999999876544333                38899999999999999999999999998888899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++|+++++.|+  .+|+||+
T Consensus       168 ~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  204 (270)
T 3ftp_A          168 SAGN-------------------------------------------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNC  204 (270)
T ss_dssp             HHCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEE
Confidence            7654                                           567899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+|.|++....               ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       205 v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  267 (270)
T 3ftp_A          205 VAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGGM  267 (270)
T ss_dssp             EEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCCc
Confidence            99999999986542               1348999999999999988889999999998764

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=8.2e-42  Score=301.04  Aligned_cols=229  Identities=23%  Similarity=0.297  Sum_probs=202.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++...+ .++.++++|++|+++++++++++.++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVG-GKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999999998888887654 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~  160 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++ +++||++||.
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~  170 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVSVQAML----------------DMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASM  170 (276)
T ss_dssp             HSCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             cCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECch
Confidence            99999999999987554433                338999999999999999999999999998765 4899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+.....                                         +++...|++||+|+++++++++.|+  .+|+|
T Consensus       171 ~~~~~~~-----------------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrv  209 (276)
T 3r1i_A          171 SGHIINI-----------------------------------------PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRV  209 (276)
T ss_dssp             GGTSCCC-----------------------------------------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HhcccCC-----------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            8765421                                         1356889999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+|+|++.+..              ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       210 n~v~PG~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  273 (276)
T 3r1i_A          210 NSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGY  273 (276)
T ss_dssp             EEEEECCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEeeCCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEECcCc
Confidence            9999999999997642              2358999999999999998889999999988753

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.9e-42  Score=305.09  Aligned_cols=228  Identities=23%  Similarity=0.274  Sum_probs=201.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++....+.++.++.+|++|.++++++++++.++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999988888888886655567999999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|+++..++||++||..
T Consensus       103 ~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  166 (277)
T 4fc7_A          103 FGRIDILINCAAGNFLCPAG----------------ALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATL  166 (277)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSH
T ss_pred             cCCCCEEEECCcCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchh
Confidence            99999999999976544433                23899999999999999999999999999887789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       167 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  203 (277)
T 4fc7_A          167 GNRGQ-------------------------------------------ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN  203 (277)
T ss_dssp             HHHTC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hCCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            87654                                           566899999999999999999999  489999


Q ss_pred             EeecceeecCcccC------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++...                  ....+|||+|+.+++++++.....+|+.+..++..
T Consensus       204 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          204 SLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             EEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred             EEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCCc
Confidence            99999999985211                  12458999999999999988889999999998763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.5e-42  Score=303.57  Aligned_cols=224  Identities=29%  Similarity=0.313  Sum_probs=199.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++    +.++.++.+|++|.++++++++++.++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI----GCGAAACRVDVSDEQQIIAMVDACVAA  100 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCcceEEEecCCCHHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999988887777666    346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|.|++++.|+||++||..
T Consensus       101 ~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~  164 (277)
T 3gvc_A          101 FGGVDKLVANAGVVHLASLID----------------TTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLA  164 (277)
T ss_dssp             HSSCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence            999999999999876544433                3899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       165 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  201 (277)
T 3gvc_A          165 GQVAV-------------------------------------------GGTGAYGMSKAGIIQLSRITAAELRSSGIRSN  201 (277)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            87654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++.+..                      ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       202 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  272 (277)
T 3gvc_A          202 TLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGGT  272 (277)
T ss_dssp             EEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCcc
Confidence            999999999974321                      2358999999999999988889999999988863

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-41  Score=298.27  Aligned_cols=225  Identities=28%  Similarity=0.344  Sum_probs=199.2

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++|.++++++++++.++
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV----GRGAVHHVVDLTNEVSVRALIDFTIDT   82 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            3688999999999999999999999999999999999999988877776    346888999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+.......              ..+.+.++|++++++|+.++++++++++|+|++++.++||++||..
T Consensus        83 ~g~id~lv~nAg~~~~~~~~--------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  148 (271)
T 3tzq_B           83 FGRLDIVDNNAAHSDPADML--------------VTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSAT  148 (271)
T ss_dssp             HSCCCEEEECCCCCCTTCCC--------------GGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCCc--------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHH
Confidence            99999999999986331111              1234899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       149 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  185 (271)
T 3tzq_B          149 AHAAY-------------------------------------------DMSTAYACTKAAIETLTRYVATQYGRHGVRCN  185 (271)
T ss_dssp             GTSBC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HcCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence            87654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccC-C---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN-A---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~-~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|.|++... .               ...+|||+|+.+++++++.....+|+.+..++.
T Consensus       186 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          186 AIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             EEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            99999999998762 1               234899999999999998888999999999886

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=7.3e-42  Score=299.32  Aligned_cols=225  Identities=23%  Similarity=0.305  Sum_probs=199.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++++|++|.++++++++++.+++
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999998888888887654 469999999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+||||||.... .+.                .+.+.++|++++++|+.++++++++++|+|+++. |+||++||..
T Consensus        87 g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~  149 (264)
T 3ucx_A           87 GRVDVVINNAFRVPSMKPF----------------ANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMV  149 (264)
T ss_dssp             SCCSEEEECCCSCCCCCCG----------------GGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGG
T ss_pred             CCCcEEEECCCCCCCCCCc----------------hhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcch
Confidence            999999999998632 222                2348999999999999999999999999998765 9999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       150 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn  186 (264)
T 3ucx_A          150 VRHSQ-------------------------------------------AKYGAYKMAKSALLAMSQTLATELGEKGIRVN  186 (264)
T ss_dssp             GGCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred             hccCC-------------------------------------------CccHHHHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence            87654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++.+..                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       187 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          187 SVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             EEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            999999999975431                          2358999999999999988889999999988764

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.7e-41  Score=299.21  Aligned_cols=224  Identities=23%  Similarity=0.329  Sum_probs=198.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.+++..+++    +.++.++++|++|.++++++++++.+.
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI----GSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999988777766654    346899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.|+||++||..
T Consensus        99 ~g~iD~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  162 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGTTGNVVT----------------IPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYT  162 (277)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchh
Confidence            999999999999876544433                3899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       163 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  199 (277)
T 4dqx_A          163 ATSAI-------------------------------------------ADRTAYVASKGAISSLTRAMAMDHAKEGIRVN  199 (277)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hCcCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            87654                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccC---------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN---------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~---------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++...                     ....+|||+|+.+++++++.....+|+.+..++..
T Consensus       200 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (277)
T 4dqx_A          200 AVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGGS  269 (277)
T ss_dssp             EEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             EEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCch
Confidence            99999999998221                     01348999999999999988889999999998864

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.1e-42  Score=302.37  Aligned_cols=227  Identities=19%  Similarity=0.213  Sum_probs=201.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+.  .++.++.+|++|+++++++++++.+
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (281)
T 3svt_A            8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA   87 (281)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            68899999999999999999999999999999999999998888888876543  2789999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+... .+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||
T Consensus        88 ~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS  151 (281)
T 3svt_A           88 WHGRLHGVVHCAGGSENIGPIT----------------QVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISS  151 (281)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeC
Confidence            99999999999997432 2222                348999999999999999999999999999888899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       152 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~  188 (281)
T 3svt_A          152 IAASNTH-------------------------------------------RWFGAYGVTKSAVDHLMQLAADELGASWVR  188 (281)
T ss_dssp             HHHHSCC-------------------------------------------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHcCCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            9876654                                           456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|.|++.+..                 ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       189 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~  256 (281)
T 3svt_A          189 VNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQ  256 (281)
T ss_dssp             EEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCCh
Confidence            99999999999986542                 2348999999999999988888999999988753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.9e-41  Score=296.57  Aligned_cols=228  Identities=25%  Similarity=0.239  Sum_probs=200.1

Q ss_pred             CCcCCCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN-KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs-~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++|.++++++++++.
T Consensus        17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   96 (266)
T 3o38_A           17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTV   96 (266)
T ss_dssp             CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            456889999999998 5999999999999999999999999999998888877666689999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~is  158 (290)
                      ++++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|+|+++ ..++||++|
T Consensus        97 ~~~g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~s  160 (266)
T 3o38_A           97 EKAGRLDVLVNNAGLGGQTPVV----------------DMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNA  160 (266)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEEC
T ss_pred             HHhCCCcEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            9999999999999987554433                33899999999999999999999999999876 568999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++++++++.|+  .+|
T Consensus       161 S~~~~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi  197 (266)
T 3o38_A          161 SVLGWRAQ-------------------------------------------HSQSHYAAAKAGVMALTRCSAIEAVEFGV  197 (266)
T ss_dssp             CGGGTCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             CHHHcCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            99887654                                           567899999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+++|++.+..                ...+|||+|+.++++++......+|+++..++.
T Consensus       198 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          198 RINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             EEEEEEECCCCC-----------------CCTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             EEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence            999999999999986542                134899999999999998888999999998875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-41  Score=305.59  Aligned_cols=228  Identities=29%  Similarity=0.347  Sum_probs=197.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------cccHHHHHHHHHhcCCCcEEEEEeeCCCH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD------------EKGGLEAVEKLKHSGFDNVIFHQLDVADP   68 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~   68 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+++...+ .++.++.+|++|+
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~  119 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQG-RRIIARQADVRDL  119 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcC-CeEEEEECCCCCH
Confidence            667899999999999999999999999999999999886            444555555555443 5699999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL  148 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~  148 (290)
                      ++++++++++.++++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~  183 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVS----------------LTDQQWSDILQTNLIGAWHACRAVLPSMIE  183 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999876544433                389999999999999999999999999987


Q ss_pred             CC-CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 039097          149 SD-SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR  227 (290)
Q Consensus       149 ~~-~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~  227 (290)
                      +. +|+||++||..+..+.                                           ++...|++||+|+++|++
T Consensus       184 ~~~~g~Iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~  220 (317)
T 3oec_A          184 RGQGGSVIFVSSTVGLRGA-------------------------------------------PGQSHYAASKHGVQGLML  220 (317)
T ss_dssp             TCSCEEEEEECCGGGSSCC-------------------------------------------TTBHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECcHHhcCCC-------------------------------------------CCCcchHHHHHHHHHHHH
Confidence            65 6899999999887654                                           567899999999999999


Q ss_pred             HHHhhC--CCeEEEEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhccCC
Q 039097          228 ILAKKY--PNFCINCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHKG  275 (290)
Q Consensus       228 ~la~e~--~~i~vn~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~~  275 (290)
                      +|+.|+  .+|+||+|+||+|+|++...                              .+..+|||+|+.++|++++...
T Consensus       221 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~  300 (317)
T 3oec_A          221 SLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEAR  300 (317)
T ss_dssp             HHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCccc
Confidence            999999  48999999999999997531                              1224899999999999998888


Q ss_pred             CCceeEeecCccc
Q 039097          276 GPSGLFFSRKEET  288 (290)
Q Consensus       276 ~~~g~~~~~~~~~  288 (290)
                      ..+|+.+..++..
T Consensus       301 ~itG~~i~vdGG~  313 (317)
T 3oec_A          301 YIHGAAIPVDGGQ  313 (317)
T ss_dssp             TCCSCEEEESTTG
T ss_pred             CCCCCEEEECcch
Confidence            9999999998864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=1.3e-41  Score=299.31  Aligned_cols=227  Identities=20%  Similarity=0.232  Sum_probs=192.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-------HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-------GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+ .++.++.+|++|.++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   80 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG-GQGLALKCDIREEDQVRAA   80 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT-SEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHHHH
Confidence            46899999999999999999999999999999999998764       455555555443 5689999999999999999


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      ++++.++++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++|
T Consensus        81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i  144 (274)
T 3e03_A           81 VAATVDTFGGIDILVNNASAIWLRGTLD----------------TPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHI  144 (274)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGG----------------SCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEE
T ss_pred             HHHHHHHcCCCCEEEECCCcccCCCccc----------------CCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceE
Confidence            9999999999999999999875544332                389999999999999999999999999998888999


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+..                                         .++...|++||+|+++|+++++.|+ 
T Consensus       145 v~isS~~~~~~~~-----------------------------------------~~~~~~Y~asKaal~~l~~~la~e~~  183 (274)
T 3e03_A          145 LTLAPPPSLNPAW-----------------------------------------WGAHTGYTLAKMGMSLVTLGLAAEFG  183 (274)
T ss_dssp             EECCCCCCCCHHH-----------------------------------------HHHCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEECChHhcCCCC-----------------------------------------CCCCchHHHHHHHHHHHHHHHHHHhh
Confidence            9999998876410                                         0345789999999999999999999 


Q ss_pred             -CCeEEEEeecc-eeecCcccCCC------CCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          234 -PNFCINCVCPG-YVKTEMTYNAG------RLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       234 -~~i~vn~v~PG-~v~T~~~~~~~------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                       .+|+||+|+|| ++.|++....+      ..+|||+|+.++++++......+|+++.+++
T Consensus       184 ~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~itG~~i~~~g  244 (274)
T 3e03_A          184 PQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAVLTREAAGFHGQFLIDDE  244 (274)
T ss_dssp             GGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHHHHHHTSCCTTCCSCEEEHHH
T ss_pred             hcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHHHHHHhCccccccCCeEEEcCc
Confidence             48999999999 69999875432      4589999999999999888899999996554

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.2e-41  Score=294.84  Aligned_cols=225  Identities=26%  Similarity=0.328  Sum_probs=198.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|++|||||++|||+++|++|+++|++|++++|+ .+..++..+++...+ .++.++++|++|.++++++++++.+++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG-VDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999998875 466666666666544 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus        81 g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  144 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMR----------------MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVG  144 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhh
Confidence            99999999999876544433                38999999999999999999999999998888899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++++++++.|+  .+|+||+
T Consensus       145 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~  181 (246)
T 3osu_A          145 AVGN-------------------------------------------PGQANYVATKAGVIGLTKSAARELASRGITVNA  181 (246)
T ss_dssp             HHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            7654                                           566899999999999999999998  4899999


Q ss_pred             eecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++.+...               ..+|+|+|+.+++++++.....+|+.+..++..
T Consensus       182 v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG~  244 (246)
T 3osu_A          182 VAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVNGGM  244 (246)
T ss_dssp             EEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTS
T ss_pred             EEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999999876531               348999999999999988889999999988753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.3e-41  Score=297.01  Aligned_cols=226  Identities=25%  Similarity=0.290  Sum_probs=191.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|+++ +|+.+..++..+++...+ .++.++.+|++|.++++++++++.
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG-RSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT-SCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998 556666667777776544 468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      ++++++|+||||||... ..+..                +.+.++|++++++|+.++++++++++|+|++  .|+||++|
T Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~is  143 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIARKTIA----------------EMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFS  143 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCCCCTT----------------TCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEC
T ss_pred             HHhCCCCEEEECCCccCCCCChh----------------hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEc
Confidence            99999999999999763 33332                3389999999999999999999999999986  68999999


Q ss_pred             CCCCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCe
Q 039097          159 SSLGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNF  236 (290)
Q Consensus       159 S~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i  236 (290)
                      |..+. .+.                                           ++...|++||+|+++++++++.|+ ++|
T Consensus       144 S~~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~I  180 (259)
T 3edm_A          144 SQAGRDGGG-------------------------------------------PGALAYATSKGAVMTFTRGLAKEVGPKI  180 (259)
T ss_dssp             CHHHHHCCS-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CHHhccCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence            98776 332                                           456899999999999999999998 569


Q ss_pred             EEEEeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||++.|++.+...                ..+|||+|+.+++++++.....+|+.+..+|..
T Consensus       181 ~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~  248 (259)
T 3edm_A          181 RVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGV  248 (259)
T ss_dssp             EEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCS
T ss_pred             EEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence            9999999999999876531                248999999999999988889999999998864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.3e-41  Score=295.83  Aligned_cols=220  Identities=15%  Similarity=0.101  Sum_probs=186.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.||++|.++++++++++.+. 
T Consensus         4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            6889999999999999999999999999999999999999999888887664 47999999999999999999999999 


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus        82 g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  145 (252)
T 3h7a_A           82 APLEVTIFNVGANVNFPIL----------------ETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS  145 (252)
T ss_dssp             SCEEEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG
T ss_pred             CCceEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHH
Confidence            9999999999987654433                238999999999999999999999999999888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE-E
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI-N  239 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v-n  239 (290)
                      ..+.                                           ++...|++||+|+++|+++|+.|+  .+|+| |
T Consensus       146 ~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n  182 (252)
T 3h7a_A          146 LRGG-------------------------------------------SGFAAFASAKFGLRAVAQSMARELMPKNIHVAH  182 (252)
T ss_dssp             TCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cCCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEE
Confidence            7754                                           567899999999999999999999  48999 9


Q ss_pred             EeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEee
Q 039097          240 CVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      +|+||+++|++.+..              +..+|||+|+.++++++.+.....|++..
T Consensus       183 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l~s~~~~~~~~~i~~  240 (252)
T 3h7a_A          183 LIIDSGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQLYQQPKSAWTFEMEI  240 (252)
T ss_dssp             EEEC---------------------------CCHHHHHHHHHHHHHCCGGGBCSEEEE
T ss_pred             EecCCccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHHHhCchhcceeeEEe
Confidence            999999999987653              24689999999999999877666666643

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=9.3e-42  Score=301.09  Aligned_cols=225  Identities=30%  Similarity=0.346  Sum_probs=197.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.++++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG-HDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999999999998888888886654 4689999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhch--hhccCCCCeEEEEcCCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP--LLQLSDSARIVNVSSSL  161 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~--~l~~~~~~~iV~isS~~  161 (290)
                      ++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|  .|++++.|+||++||..
T Consensus       101 ~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~  164 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETA----------------DLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG  164 (279)
T ss_dssp             SCCEEEECCCCCCCSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGG
T ss_pred             CCcEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChh
Confidence            999999999987654433                238999999999999999999999999  67777779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       165 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  201 (279)
T 3sju_A          165 GKQGV-------------------------------------------MYAAPYTASKHGVVGFTKSVGFELAKTGITVN  201 (279)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEE
Confidence            87654                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++.+..                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       202 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~  276 (279)
T 3sju_A          202 AVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL  276 (279)
T ss_dssp             EEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred             EEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence            999999999985421                          1358999999999999988888999999988763

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=2.7e-41  Score=299.88  Aligned_cols=242  Identities=18%  Similarity=0.154  Sum_probs=197.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHH----------
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA----------   69 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~----------   69 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++....+.++.++++|+++.+          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            6789999999999999999999999999999999999 99888888888776333457999999999999          


Q ss_pred             -------HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHh
Q 039097           70 -------AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEAL  142 (290)
Q Consensus        70 -------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~  142 (290)
                             +++++++++.++++++|+||||||+....+..+.. .. .........+.+.++|++++++|+.+++++++++
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  161 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRND-ED-GHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  161 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC---------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcC-cc-ccccccccccccHHHHHHHHHHHhHHHHHHHHHH
Confidence                   99999999999999999999999987544332220 00 0000000011128999999999999999999999


Q ss_pred             chhhccCC------CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhh
Q 039097          143 IPLLQLSD------SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYI  216 (290)
Q Consensus       143 ~~~l~~~~------~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  216 (290)
                      +|+|++++      .++||++||..+..+.                                           ++...|+
T Consensus       162 ~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~-------------------------------------------~~~~~Y~  198 (291)
T 1e7w_A          162 AHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------------------LGYTIYT  198 (291)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCC-------------------------------------------TTCHHHH
T ss_pred             HHHHHhcCCCCCCCCcEEEEEechhhcCCC-------------------------------------------CCCchhH
Confidence            99998776      6899999999887654                                           5678999


Q ss_pred             hhHHHHHHHHHHHHhhC--CCeEEEEeecceeecCcccC-------------C--CCCChhhhccchhhhhhccCCCCce
Q 039097          217 LSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYN-------------A--GRLTVEEGAESPVWLALLHKGGPSG  279 (290)
Q Consensus       217 ~sKaa~~~~~~~la~e~--~~i~vn~v~PG~v~T~~~~~-------------~--~~~~~e~~a~~~~~l~~~~~~~~~g  279 (290)
                      +||+++++|+++|+.|+  .+|+||+|+||+++|++ +.             .  ...+|||+|+.+++++++.....+|
T Consensus       199 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG  277 (291)
T 1e7w_A          199 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITG  277 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-cCCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccC
Confidence            99999999999999998  48999999999999998 31             1  2358999999999999988888999


Q ss_pred             eEeecCccc
Q 039097          280 LFFSRKEET  288 (290)
Q Consensus       280 ~~~~~~~~~  288 (290)
                      +++..++..
T Consensus       278 ~~i~vdGG~  286 (291)
T 1e7w_A          278 TCVKVDGGY  286 (291)
T ss_dssp             CEEEESTTG
T ss_pred             cEEEECCCc
Confidence            999988763

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.8e-41  Score=291.98  Aligned_cols=222  Identities=19%  Similarity=0.183  Sum_probs=186.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|++|.++++++++++.+.++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----NAVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            468999999999999999999999999999999999988887777763    2589999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|+|++++ ++||++||..+.
T Consensus        77 ~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~  139 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGV----------------YTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQ  139 (235)
T ss_dssp             SCSEEEEECCCC------C----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECC
T ss_pred             CCcEEEECCCCCCCCChHh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhc
Confidence            9999999999865444333                38999999999999999999999999998765 599999999887


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|++||+|+++|+++++.|+  .+|+||+|
T Consensus       140 ~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v  176 (235)
T 3l6e_A          140 VGK-------------------------------------------ANESLYCASKWGMRGFLESLRAELKDSPLRLVNL  176 (235)
T ss_dssp             SSC-------------------------------------------SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEE
T ss_pred             CCC-------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEE
Confidence            764                                           567899999999999999999999  48999999


Q ss_pred             ecceeecCcccCC------CCCChhhhccchhhhhhccC-CCCceeEeecCcccc
Q 039097          242 CPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHK-GGPSGLFFSRKEETL  289 (290)
Q Consensus       242 ~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~~~~~  289 (290)
                      +||+++|++....      ...+|||+|+.+++++..+. ...+|..+......+
T Consensus       177 ~PG~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~~~~~~  231 (235)
T 3l6e_A          177 YPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGRNEGHH  231 (235)
T ss_dssp             EEEEECCCC-----------CBCHHHHHHHHHHHTCCCSSEEEEEEEEEECCC--
T ss_pred             eCCCccCcchhccCCCCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEecCCCCc
Confidence            9999999997654      34699999999999998544 567887777665543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.2e-41  Score=298.78  Aligned_cols=226  Identities=25%  Similarity=0.322  Sum_probs=197.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++| +.+..++..+++...+ .++.++.+|++|.++++++++++.++
T Consensus        25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG-GEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999998 5555666666665543 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||..
T Consensus       104 ~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  167 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLL----------------RMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVV  167 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHH
T ss_pred             cCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchh
Confidence            99999999999987554333                33899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       168 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn  204 (269)
T 4dmm_A          168 GEMGN-------------------------------------------PGQANYSAAKAGVIGLTKTVAKELASRGITVN  204 (269)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence            77654                                           566899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC------------CCCChhhhccchhhhhhc-cCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|++....            ...+|+|+|+.+++++++ .....+|+.+..++..
T Consensus       205 ~v~PG~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG~  266 (269)
T 4dmm_A          205 AVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGGL  266 (269)
T ss_dssp             EEEECCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTTS
T ss_pred             EEEECCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCCe
Confidence            999999999986542            245899999999999998 4567999999988764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.5e-41  Score=300.02  Aligned_cols=228  Identities=27%  Similarity=0.367  Sum_probs=188.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++| +.+.+++..+++...+ .++.++++|++|.++++++++++.
T Consensus        24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~  102 (280)
T 4da9_A           24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVDAVV  102 (280)
T ss_dssp             CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHHHHH
T ss_pred             hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999996 6666777777776544 469999999999999999999999


Q ss_pred             hhcCCccEEEEccccCC--CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeE
Q 039097           80 SHFGKLDILVNNAGITG--ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARI  154 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~i  154 (290)
                      ++++++|+||||||+..  ..+.                .+.+.++|++++++|+.++++++++++|+|+++.   .++|
T Consensus       103 ~~~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~I  166 (280)
T 4da9_A          103 AEFGRIDCLVNNAGIASIVRDDF----------------LDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSI  166 (280)
T ss_dssp             HHHSCCCEEEEECC------CCG----------------GGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred             HHcCCCCEEEECCCccccCCCCh----------------hhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEE
Confidence            99999999999999842  2222                2348999999999999999999999999998754   6899


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+.                                           ++...|++||+|+++++++++.|+ 
T Consensus       167 v~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  203 (280)
T 4da9_A          167 INITSVSAVMTS-------------------------------------------PERLDYCMSKAGLAAFSQGLALRLA  203 (280)
T ss_dssp             EEECCC--------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEcchhhccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHH
Confidence            999999887654                                           566899999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          234 -PNFCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                       .+|+||+|+||+|.|++....                ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       204 ~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  275 (280)
T 4da9_A          204 ETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGGL  275 (280)
T ss_dssp             TTTEEEEEEEECCBCC----------------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTTC
T ss_pred             HhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence             489999999999999986542                1238999999999999988888999999988864

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=7.1e-42  Score=297.20  Aligned_cols=228  Identities=24%  Similarity=0.344  Sum_probs=193.1

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |. ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....  ..++.++.+|++|.+++++++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            44 6889999999999999999999999999999999999999888888887653  25689999999999999999999


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      +.++++++|+||||||+....+. +                .+.++|++++++|+.++++++++++|+|++++.|+||++
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~-~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~i  143 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSL-S----------------EPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNV  143 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCC-S----------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHhcCCCCEEEECCCcCCCCCC-C----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence            99999999999999998754433 2                278999999999999999999999999998888999999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++...|++||+|+++|+++++.|+  .+
T Consensus       144 sS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~g  180 (250)
T 3nyw_A          144 ASRAAKYGF-------------------------------------------ADGGIYGSTKFALLGLAESLYRELAPLG  180 (250)
T ss_dssp             CC--------------------------------------------------CCTTHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ccHHhcCCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHhhhcC
Confidence            999887643                                           336899999999999999999998  48


Q ss_pred             eEEEEeecceeecCcccCC-------CCCChhhhccchhhhhhccCC-CCceeEeecCccc
Q 039097          236 FCINCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKG-GPSGLFFSRKEET  288 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~-~~~g~~~~~~~~~  288 (290)
                      |+||+|+||++.|++.+..       ...+|||+|+.++++++.+.. ..++..+..++..
T Consensus       181 i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~~~~~~i~vd~~~  241 (250)
T 3nyw_A          181 IRVTTLCPGWVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCLLNLSENVCIKDIVFEMKKSI  241 (250)
T ss_dssp             EEEEEEEESSBCSHHHHHTTCCSCGGGSBCHHHHHHHHHHHHTSCTTEECCEEEEEEHHHH
T ss_pred             cEEEEEecCcccCchhhhcCCCcccccCCCHHHHHHHHHHHHcCCCceEeeEEEEEeeccc
Confidence            9999999999999986543       246999999999999997664 5677777776653

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.8e-41  Score=298.76  Aligned_cols=224  Identities=21%  Similarity=0.185  Sum_probs=199.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|++++.++..+++...+ .++.++.+|++|.++++++++++.+. 
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~-  107 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAGTDLIERAEAI-  107 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHHHHHHHHHHHH-
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            5789999999999999999999999999999999999999988888887654 46899999999999999999999888 


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus       108 g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~  171 (275)
T 4imr_A          108 APVDILVINASAQINATLS----------------ALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ  171 (275)
T ss_dssp             SCCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh
Confidence            9999999999987544433                338999999999999999999999999999888899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++++++++.|+  .+|+||+
T Consensus       172 ~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  208 (275)
T 4imr_A          172 LRPK-------------------------------------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNT  208 (275)
T ss_dssp             TSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CCCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            7643                                           456789999999999999999999  4899999


Q ss_pred             eecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+|+|++....                   ...+|||+|+.+++++++.....+|+.+..+|.
T Consensus       209 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          209 LAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             EEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             EEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence            99999999975431                   134899999999999998888999999998874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-41  Score=294.96  Aligned_cols=227  Identities=23%  Similarity=0.215  Sum_probs=185.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+..++..+++    +.++.++.+|++|.++++++++++.+
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998877766665    24688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------CCCeE
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSARI  154 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~~~~i  154 (290)
                      +++++|+||||||+....+....            ..+.+.++|++++++|+.++++++++++|+|+++      ..|+|
T Consensus        78 ~~g~id~lv~nAg~~~~~~~~~~------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~i  145 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAPGEKILGR------------SGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVI  145 (257)
T ss_dssp             HHSCCCEEEECCCCCCCCCSEET------------TEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEE
T ss_pred             HcCCCCEEEECCCCCCCCccccc------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEE
Confidence            99999999999998754432211            1134789999999999999999999999999875      56899


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+.                                           ++...|++||+|+++++++++.|+ 
T Consensus       146 v~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~  182 (257)
T 3tpc_A          146 VNTASIAAFDGQ-------------------------------------------IGQAAYAASKGGVAALTLPAARELA  182 (257)
T ss_dssp             EEECCTHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEechhhccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            999999887654                                           566899999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          234 -PNFCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                       .+|+||+|+||+|.|++....                ...+|||+|+.+++++++  ...+|+.+..++..
T Consensus       183 ~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~--~~itG~~i~vdGG~  252 (257)
T 3tpc_A          183 RFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVKHICEN--TMLNGEVIRLDGAL  252 (257)
T ss_dssp             GGTEEEEEEEECCBSCC--------------CCSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             HcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc--CCcCCcEEEECCCc
Confidence             489999999999999986542                235899999999999975  57999999988864

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-42  Score=304.01  Aligned_cols=227  Identities=24%  Similarity=0.293  Sum_probs=200.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      .++++|++|||||++|||+++|++|+++|+   +|++++|+.+++++..+++.... +.++.++.||++|.+++++++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999998   99999999999988888887653 45789999999999999999999


Q ss_pred             HHhhcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           78 IRSHFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      +.++++++|+||||||+... .+..                +.+.++|++++++|+.|+++++++++|+|++++.|+||+
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~  172 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVG----------------QIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVN  172 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTT----------------SCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            99999999999999998652 2222                338999999999999999999999999999888899999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++...|++||+|+++|+++++.|+  .
T Consensus       173 isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~  209 (287)
T 3rku_A          173 LGSIAGRDAY-------------------------------------------PTGSIYCASKFAVGAFTDSLRKELINT  209 (287)
T ss_dssp             ECCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             ECChhhcCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999887654                                           567899999999999999999999  5


Q ss_pred             CeEEEEeecceeecCcccC---------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          235 NFCINCVCPGYVKTEMTYN---------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~---------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|+||+|+|++...               ..+++|||+|+.++++++......+|+.+..++.
T Consensus       210 gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g  277 (287)
T 3rku_A          210 KIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYATSRKQNTVIADTLIFPTN  277 (287)
T ss_dssp             SCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred             CCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCC
Confidence            8999999999999998421               1256899999999999999888888988776543

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=4.8e-41  Score=295.02  Aligned_cols=225  Identities=24%  Similarity=0.288  Sum_probs=194.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++++ .+..++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   92 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVA   92 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998765 455666666666544 5689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++  .|+||++||.
T Consensus        93 ~~g~id~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~  154 (270)
T 3is3_A           93 HFGHLDIAVSNSGVVSFGHLK----------------DVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSN  154 (270)
T ss_dssp             HHSCCCEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCT
T ss_pred             HcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCc
Confidence            999999999999987544433                3389999999999999999999999999975  6899999998


Q ss_pred             CC-cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LG-KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      .+ ..+.                                           ++...|++||+|+++|+++++.|+  .+|+
T Consensus       155 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  191 (270)
T 3is3_A          155 TSKDFSV-------------------------------------------PKHSLYSGSKGAVDSFVRIFSKDCGDKKIT  191 (270)
T ss_dssp             TTTTCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhccCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCeE
Confidence            74 3332                                           466899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC---------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++.+..                           +..+|||+|+.+++++++.....+|+.+..++..
T Consensus       192 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          192 VNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             EEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             EEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence            99999999999986520                           1346999999999999988889999999988753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-41  Score=291.62  Aligned_cols=227  Identities=25%  Similarity=0.290  Sum_probs=202.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|++++.++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG-FKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999988888888776654 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus        80 ~~~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~  143 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMM----------------RMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVV  143 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             cCCCCEEEECCCCCCCCchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchh
Confidence            99999999999987554333                23899999999999999999999999999888889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  180 (247)
T 3lyl_A          144 GSAGN-------------------------------------------PGQTNYCAAKAGVIGFSKSLAYEVASRNITVN  180 (247)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence            77654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++.+...               ..+|||+|+.++++++......+|+.+..++.-
T Consensus       181 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG~  244 (247)
T 3lyl_A          181 VVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGGM  244 (247)
T ss_dssp             EEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCCE
Confidence            9999999999976631               348999999999999988888999999988753

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-41  Score=290.53  Aligned_cols=225  Identities=28%  Similarity=0.327  Sum_probs=198.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeC--CCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV--ADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~~   79 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+...+.++.+|+  ++.++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999999999988888877655677888877  99999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|+||||||+.......               .+.+.++|++++++|+.+++++++.++|+|++++.++||++||
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~---------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS  154 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPL---------------EQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSS  154 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCG---------------GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECC
T ss_pred             HhCCCCCEEEECCccCCCCCCc---------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcc
Confidence            9999999999999986432211               2348999999999999999999999999999888899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC---CCe
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---PNF  236 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~---~~i  236 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+   .+|
T Consensus       155 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i  191 (247)
T 3i1j_A          155 SVGRKGR-------------------------------------------ANWGAYGVSKFATEGLMQTLADELEGVTAV  191 (247)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred             hhhcCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhcCCCCe
Confidence            9887654                                           567899999999999999999998   489


Q ss_pred             EEEEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          237 CINCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      +||+|+||+++|+|....       ...+|||+|+.++++++......+|+.+..
T Consensus       192 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~itG~~i~~  246 (247)
T 3i1j_A          192 RANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYLMGPDSTGINGQALNA  246 (247)
T ss_dssp             EEEEEECCCCSSHHHHHHSTTSCGGGSCCGGGGTHHHHHHHSGGGTTCCSCEEEC
T ss_pred             EEEEEecCcccCccchhcccccCccCCCCHHHHHHHHHHHhCchhccccCeeecC
Confidence            999999999999985432       245899999999999998888999998864

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.3e-41  Score=295.04  Aligned_cols=223  Identities=26%  Similarity=0.372  Sum_probs=187.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++ |+.+..++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG-GKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45799999999999999999999999999999985 55556666666665544 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++  .|+||++||..
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~  164 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIA----------------ETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQ  164 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTH
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChh
Confidence            99999999999987544433                3389999999999999999999999999975  48999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       165 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  201 (267)
T 3u5t_A          165 VGLLH-------------------------------------------PSYGIYAAAKAGVEAMTHVLSKELRGRDITVN  201 (267)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEE
T ss_pred             hccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEE
Confidence            76543                                           566899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                ...+|||+|+.+++++++.....+|+.+..+|.
T Consensus       202 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          202 AVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             EEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             EEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            999999999986431                134899999999999998888999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=4.9e-41  Score=295.51  Aligned_cols=214  Identities=24%  Similarity=0.305  Sum_probs=179.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|++|.++++++++++.+
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----DDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----SCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHHH
Confidence            667889999999999999999999999999999999999888887777663    4688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEEEE
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNV  157 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV~i  157 (290)
                      +++++|+||||||+... .+..                +.+.++|++++++|+.++++++++++|.|++++  .|+||++
T Consensus        99 ~~g~iD~lVnnAg~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~i  162 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPAIPME----------------DLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINN  162 (272)
T ss_dssp             HHSCCCEEEECCCCCCCSSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEE
T ss_pred             HcCCCCEEEECCCCCCCCCChh----------------hCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEE
Confidence            99999999999998643 2222                338999999999999999999999999998775  6899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++...|++||+|+++|+++++.|+  .+
T Consensus       163 sS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~g  199 (272)
T 4dyv_A          163 GSISATSPR-------------------------------------------PYSAPYTATKHAITGLTKSTSLDGRVHD  199 (272)
T ss_dssp             CCSSTTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             CchhhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccC
Confidence            999987754                                           567899999999999999999998  48


Q ss_pred             eEEEEeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCC
Q 039097          236 FCINCVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGP  277 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~  277 (290)
                      |+||+|+||+|+|++.+..              +..+|||+|+.++++++.+....
T Consensus       200 I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~  255 (272)
T 4dyv_A          200 IACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYMASLPLDAN  255 (272)
T ss_dssp             EEEEEEEEEECC------------------------CHHHHHHHHHHHHHSCTTSC
T ss_pred             EEEEEEEECcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHHhCCCCcCc
Confidence            9999999999999987653              24589999999999999877543

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=5.7e-41  Score=296.92  Aligned_cols=225  Identities=18%  Similarity=0.225  Sum_probs=196.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-------cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-------GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+       .+++..+++...+ .++.+++||++|.++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG-GQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT-SEEEEEECCTTSHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHH
Confidence            3588999999999999999999999999999999999976       4566666666554 4699999999999999999


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      ++++.++++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++|
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~i  147 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAINLGSIEE----------------VPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHI  147 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCCCCCTTT----------------SCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEE
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEE
Confidence            9999999999999999999876554433                389999999999999999999999999998888999


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+..                                          ++...|++||+|+++|+++|+.|+ 
T Consensus       148 v~isS~~~~~~~~------------------------------------------~~~~~Y~asKaal~~~~~~la~e~~  185 (285)
T 3sc4_A          148 LTLSPPIRLEPKW------------------------------------------LRPTPYMMAKYGMTLCALGIAEELR  185 (285)
T ss_dssp             EECCCCCCCSGGG------------------------------------------SCSHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             EEECChhhccCCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876420                                          345889999999999999999999 


Q ss_pred             -CCeEEEEeecc-eeecCcccCC--------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          234 -PNFCINCVCPG-YVKTEMTYNA--------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       234 -~~i~vn~v~PG-~v~T~~~~~~--------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                       .+|+||+|+|| ++.|++.+..        +..+|||+|+.++++++.+. ..+|+.+..++
T Consensus       186 ~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l~s~~~-~~tG~~i~~dg  247 (285)
T 3sc4_A          186 DAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVVLNKPS-SYTGNTLLCED  247 (285)
T ss_dssp             GGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHHHHHHTSCT-TCCSCEEEHHH
T ss_pred             ccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHHHHHhCCcc-cccceEEEEcC
Confidence             48999999999 6899875542        24589999999999999888 88999987665

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=5.9e-41  Score=295.10  Aligned_cols=225  Identities=28%  Similarity=0.280  Sum_probs=195.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|+ +..++..+++...+ .++.++.+|++|.++++++.+. .++
T Consensus        27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~-~~~  103 (273)
T 3uf0_A           27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGG-GSAEAVVADLADLEGAANVAEE-LAA  103 (273)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTT-CEEEEEECCTTCHHHHHHHHHH-HHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHH-HHh
Confidence            46889999999999999999999999999999999966 45566666665543 4689999999999999999554 456


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.|+||++||..
T Consensus       104 ~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~  167 (273)
T 3uf0_A          104 TRRVDVLVNNAGIIARAPAE----------------EVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASML  167 (273)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCCcEEEECCCCCCCCCch----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchH
Confidence            79999999999987654433                33899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       168 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  204 (273)
T 3uf0_A          168 SFQGG-------------------------------------------RNVAAYAASKHAVVGLTRALASEWAGRGVGVN  204 (273)
T ss_dssp             GTSCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            87654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++....                 ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       205 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG~  270 (273)
T 3uf0_A          205 ALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGW  270 (273)
T ss_dssp             EEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            999999999986532                 2368999999999999988889999999998864

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-40  Score=291.86  Aligned_cols=225  Identities=25%  Similarity=0.300  Sum_probs=195.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++++. +..++..+++...+ .++.++.+|++|.++++++++++.++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~  106 (271)
T 3v2g_A           28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG-GRAVAIRADNRDAEAIEQAIRETVEA  106 (271)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999997664 55666666666544 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++  .++||++||..
T Consensus       107 ~g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~  168 (271)
T 3v2g_A          107 LGGLDILVNSAGIWHSAPLE----------------ETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNL  168 (271)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGG
T ss_pred             cCCCcEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChh
Confidence            99999999999987554433                3389999999999999999999999999974  68999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +....                                          .++...|++||+|+++|+++++.|+  .+|+||
T Consensus       169 ~~~~~------------------------------------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn  206 (271)
T 3v2g_A          169 AELVP------------------------------------------WPGISLYSASKAALAGLTKGLARDLGPRGITVN  206 (271)
T ss_dssp             GTCCC------------------------------------------STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hccCC------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            65431                                          1456899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++....              ...+|||+|+.++|++++.....+|+.+..++..
T Consensus       207 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  269 (271)
T 3v2g_A          207 IVHPGSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGGA  269 (271)
T ss_dssp             EEEECSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEecCCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcCc
Confidence            999999999997543              1348999999999999988889999999998864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.3e-41  Score=297.59  Aligned_cols=225  Identities=19%  Similarity=0.213  Sum_probs=189.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE---KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|..   +.+++..+++... +.++.++.+|++|.+++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-GAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-TCEEEEEECCCCSHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHH
Confidence            4578899999999999999999999999999999987754   3455566666554 35799999999999999999999


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      +.++++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|+  +.|+||++
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~i  146 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIV----------------ETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITI  146 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEE
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEE
Confidence            999999999999999987654433                338999999999999999999999999995  45899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++...|++||+|+++|+++++.|+  .+
T Consensus       147 sS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~g  183 (262)
T 3ksu_A          147 ATSLLAAYT-------------------------------------------GFYSTYAGNKAPVEHYTRAASKELMKQQ  183 (262)
T ss_dssp             CCCHHHHHH-------------------------------------------CCCCC-----CHHHHHHHHHHHHTTTTT
T ss_pred             echhhccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcC
Confidence            999876654                                           456789999999999999999999  48


Q ss_pred             eEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          236 FCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+|+||+|+|++....                ...+|||+|+.+++++++ ....+|+.+..+|..
T Consensus       184 i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i~vdGg~  251 (262)
T 3ksu_A          184 ISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWINGQTIFANGGY  251 (262)
T ss_dssp             CEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHHHHHHHHTT-TTTCCSCEEEESTTC
T ss_pred             cEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCccCCEEEECCCc
Confidence            9999999999999986442                135899999999999998 778999999998864

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=3.5e-41  Score=295.48  Aligned_cols=224  Identities=20%  Similarity=0.221  Sum_probs=196.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ ...+.++.+|+++.++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            36889999999999999999999999999999999999999888888887665 3468889999999999887765    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||.
T Consensus        82 ~~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~  145 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEPVEYF----------------DIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASE  145 (267)
T ss_dssp             HCCCCSEEEECCCCCCCCCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCG
T ss_pred             hcCCCCEEEECCCCCCCCccc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcch
Confidence            478999999999987654433                3389999999999999999999999999998888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+  .+|+|
T Consensus       146 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v  182 (267)
T 3t4x_A          146 AAIMPS-------------------------------------------QEMAHYSATKTMQLSLSRSLAELTTGTNVTV  182 (267)
T ss_dssp             GGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred             hhccCC-------------------------------------------CcchHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            887654                                           567899999999999999999999  47999


Q ss_pred             EEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++...                              .+..+|||+|+.+++++++.....+|+.+..++..
T Consensus       183 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~  262 (267)
T 3t4x_A          183 NTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGGL  262 (267)
T ss_dssp             EEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcCccccCccCCeEEECCCc
Confidence            999999999986321                              12358999999999999988889999999998763

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.8e-41  Score=291.55  Aligned_cols=220  Identities=25%  Similarity=0.294  Sum_probs=192.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++|++|||||++|||+++|++|+++|  +.|++.+|+.+++++..+++    +.++.++.+|++|.++++++++++.+++
T Consensus         1 Mgk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            1 MGKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             -CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            37999999999999999999999985  78999999988777766655    2468999999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+||||||+..+ .+..                +.+.++|++++++|+.++++++++++|+|++++ |+||++||..
T Consensus        77 g~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~  139 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVN----------------EIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDA  139 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTT----------------SCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSC
T ss_pred             CCccEEEECCcccCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCch
Confidence            999999999998643 3322                338999999999999999999999999998765 9999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+++|+||+|
T Consensus       140 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v  176 (254)
T 3kzv_A          140 CNMYF-------------------------------------------SSWGAYGSSKAALNHFAMTLANEERQVKAIAV  176 (254)
T ss_dssp             CCCSS-------------------------------------------CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             hccCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHhhccCcEEEEE
Confidence            87754                                           56789999999999999999999999999999


Q ss_pred             ecceeecCcccCCC------------------------CCChhhhccchhhhhhccC-CCCceeEeecCccc
Q 039097          242 CPGYVKTEMTYNAG------------------------RLTVEEGAESPVWLALLHK-GGPSGLFFSRKEET  288 (290)
Q Consensus       242 ~PG~v~T~~~~~~~------------------------~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~~~~  288 (290)
                      +||+++|++.....                        ..+|||+|+.+++++++.. ...+|+++..++..
T Consensus       177 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          177 APGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             ECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred             eCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence            99999999976531                        3489999999999999884 88999999998864

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=8.2e-41  Score=293.23  Aligned_cols=227  Identities=26%  Similarity=0.379  Sum_probs=197.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|+++.++++++++++.+.+
T Consensus        18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999998888877777733223468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC-
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL-  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~-  161 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||.. 
T Consensus        98 g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~  161 (267)
T 1vl8_A           98 GKLDTVVNAAGINRRHPAE----------------EFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV  161 (267)
T ss_dssp             SCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred             CCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcch
Confidence            9999999999986543322                33889999999999999999999999999988789999999987 


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++++++++++.|+  .+|+||
T Consensus       162 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  198 (267)
T 1vl8_A          162 EEVTM-------------------------------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVN  198 (267)
T ss_dssp             TCCCS-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hccCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            65543                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....                 ...+|+++|+.+++++++.....+|+.+..++..
T Consensus       199 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  264 (267)
T 1vl8_A          199 VIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGGW  264 (267)
T ss_dssp             EEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCcCCeEEECCCC
Confidence            999999999985421                 2358999999999999988788999999888753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.4e-40  Score=290.77  Aligned_cols=225  Identities=28%  Similarity=0.322  Sum_probs=192.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|+++.++++++++++.+
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~  102 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAIAAFATGVLA  102 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999998888888886654 4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      .++++|+||||||+... .+..                +.+.++|++++++|+.+++++++.++|+|++++.++||++||
T Consensus       103 ~~g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS  166 (262)
T 3rkr_A          103 AHGRCDVLVNNAGVGWFGGPLH----------------TMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISS  166 (262)
T ss_dssp             HHSCCSEEEECCCCCCCSSCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred             hcCCCCEEEECCCccCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEec
Confidence            99999999999998432 2222                338999999999999999999999999999888899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       167 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~  203 (262)
T 3rkr_A          167 LAGKNPV-------------------------------------------ADGAAYTASKWGLNGLMTSAAEELRQHQVR  203 (262)
T ss_dssp             SCSSCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhhcCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            9987654                                           567899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          238 INCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      ||+|+||++.|++....       +..+|+|+|+.++++++.+....+|+++...
T Consensus       204 v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~~~i~p  258 (262)
T 3rkr_A          204 VSLVAPGSVRTEFGVGLSAKKSALGAIEPDDIADVVALLATQADQSFISEVLVRP  258 (262)
T ss_dssp             EEEEEECCC----------------CCCHHHHHHHHHHHHTCCTTCCEEEEEEEC
T ss_pred             EEEEecCCCcCCcccccccccccccCCCHHHHHHHHHHHhcCccccccCcEEecc
Confidence            99999999999997653       2469999999999999988888888776543

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=8.2e-41  Score=294.50  Aligned_cols=227  Identities=23%  Similarity=0.278  Sum_probs=194.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------cccHHHHHHHHHhcCCCcEEEEEeeCCCHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD------------EKGGLEAVEKLKHSGFDNVIFHQLDVADPA   69 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   69 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+            .+.+++..+.+...+ .++.++.+|++|++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVRDRE   87 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTTCHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCCCHH
Confidence            46889999999999999999999999999999999987            455555555555544 46999999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      +++++++++.++++++|+||||||+.....                    +.++|++++++|+.++++++++++|+|+++
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~--------------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~  147 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAPMSA--------------------GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ  147 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCCCSS--------------------THHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCCCCC--------------------CHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999864321                    578999999999999999999999999876


Q ss_pred             C-CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          150 D-SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       150 ~-~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                      + .|+||++||..+..+...                                       ..++...|++||+|+++|+++
T Consensus       148 ~~~g~iv~isS~~~~~~~~~---------------------------------------~~~~~~~Y~asKaa~~~~~~~  188 (278)
T 3sx2_A          148 GTGGSIVLISSSAGLAGVGS---------------------------------------ADPGSVGYVAAKHGVVGLMRV  188 (278)
T ss_dssp             CSCEEEEEECCGGGTSCCCC---------------------------------------SSHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEEccHHhcCCCcc---------------------------------------CCCCchHhHHHHHHHHHHHHH
Confidence            4 689999999988764310                                       013467899999999999999


Q ss_pred             HHhhC--CCeEEEEeecceeecCcccCC-------------------------CCCChhhhccchhhhhhccCCCCceeE
Q 039097          229 LAKKY--PNFCINCVCPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLALLHKGGPSGLF  281 (290)
Q Consensus       229 la~e~--~~i~vn~v~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~  281 (290)
                      ++.|+  .+|+||+|+||+|.|++....                         ...+|||+|+.+++++++.....+|+.
T Consensus       189 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~  268 (278)
T 3sx2_A          189 YANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVT  268 (278)
T ss_dssp             HHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCE
Confidence            99999  489999999999999987531                         234899999999999998888999999


Q ss_pred             eecCccc
Q 039097          282 FSRKEET  288 (290)
Q Consensus       282 ~~~~~~~  288 (290)
                      +..++..
T Consensus       269 i~vdGG~  275 (278)
T 3sx2_A          269 LPVDAGF  275 (278)
T ss_dssp             EEESTTT
T ss_pred             EeECCCc
Confidence            9988753

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=8e-41  Score=292.25  Aligned_cols=220  Identities=17%  Similarity=0.197  Sum_probs=185.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.++..+..++.      .+.++.+|+++.++++++++++.+
T Consensus        22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA------GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH------TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc------CCeEEECCCCCHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999999999987765544443      278899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+..... .                +.+.++|++++++|+.++++++++++|+|++++.|+||++||.
T Consensus        96 ~~g~iD~lv~nAg~~~~~~-~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~  158 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAET-P----------------GEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDD  158 (260)
T ss_dssp             HCSCCSEEEECCCCCCCCC-T----------------TCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             hcCCCCEEEECCCccCCCC-C----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCh
Confidence            9999999999999875433 1                2278999999999999999999999999998888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN  239 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn  239 (290)
                      .+..+.                                           ++...|++||+|+++|+++++.|+ ++|+||
T Consensus       159 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn  195 (260)
T 3gem_A          159 VTRKGS-------------------------------------------SKHIAYCATKAGLESLTLSFAARFAPLVKVN  195 (260)
T ss_dssp             GGGTCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred             hhcCCC-------------------------------------------CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEE
Confidence            887654                                           567899999999999999999999 679999


Q ss_pred             EeecceeecCcccCC-------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....             ...+|||+|+.+++++.  ....+|+.+..++..
T Consensus       196 ~v~PG~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~--~~~itG~~i~vdGG~  255 (260)
T 3gem_A          196 GIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD--STYVTGTTLTVNGGR  255 (260)
T ss_dssp             EEEECTTCC---------------CCSCCCCCTHHHHHHHHHHHH--CSSCCSCEEEESTTT
T ss_pred             EEeecccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhh--CCCCCCCEEEECCCc
Confidence            999999999974331             13479999999999983  456899999988764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.7e-41  Score=295.92  Aligned_cols=221  Identities=24%  Similarity=0.273  Sum_probs=186.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...++..+.++++|++|.++++++++++.+++
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           30 SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF  109 (281)
T ss_dssp             ----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999999988888888876655557899999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEEEEcC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNVSS  159 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV~isS  159 (290)
                      +++|+||||||+... .+..                +.+.++|++++++|+.++++++++++|.|+++.  .|+||++||
T Consensus       110 g~iD~lvnnAG~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS  173 (281)
T 4dry_A          110 ARLDLLVNNAGSNVPPVPLE----------------EVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGS  173 (281)
T ss_dssp             SCCSEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECC
Confidence            999999999998643 2222                348999999999999999999999999998775  689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       174 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  210 (281)
T 4dry_A          174 ISAQTPR-------------------------------------------PNSAPYTATKHAITGLTKSTALDGRMHDIA  210 (281)
T ss_dssp             GGGTCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHhCCCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            9887654                                           567899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCC-CceeEe
Q 039097          238 INCVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGG-PSGLFF  282 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~-~~g~~~  282 (290)
                      ||+|+||+|.|++.+..              +..+|||+|+.++++++.+... ..+..+
T Consensus       211 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i~~~~i  270 (281)
T 4dry_A          211 CGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVLTMTV  270 (281)
T ss_dssp             EEEEEEECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             EEEEEECcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHHhCCCccCccccEEE
Confidence            99999999999987643              2468999999999999987743 344443

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=2.2e-40  Score=294.74  Aligned_cols=229  Identities=14%  Similarity=0.167  Sum_probs=194.0

Q ss_pred             CCcCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |+++++|++|||||+|  |||+++|++|+++|++|++++|+....+...+.....+  .+.+++||++|.++++++++++
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHH
Confidence            4568899999999997  99999999999999999999999765444333333322  3688999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+.....            ....+.+.+.++|++++++|+.+++++++.++|+|++  .|+||++|
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~------------~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~is  168 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNE------------LKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLS  168 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHH------------HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEE
T ss_pred             HHHcCCCCEEEECCCcCCccc------------ccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEE
Confidence            999999999999999864310            0011223489999999999999999999999999975  68999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++|+++++.|+  .+|
T Consensus       169 S~~~~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI  205 (296)
T 3k31_A          169 YYGAEKVV-------------------------------------------PHYNVMGVCKAALEASVKYLAVDLGKQQI  205 (296)
T ss_dssp             CGGGTSCC-------------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred             ehhhccCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCc
Confidence            99887654                                           566899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||+|.|++....                 ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       206 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  274 (296)
T 3k31_A          206 RVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGY  274 (296)
T ss_dssp             EEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCCEEEECCCc
Confidence            999999999999987653                 1349999999999999988889999999988764

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-40  Score=288.79  Aligned_cols=226  Identities=27%  Similarity=0.339  Sum_probs=197.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +|++|++|||||++|||+++|++|+++|++|++++| ++++.++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            1 MLKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLG-SDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999 7777777777776543 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus        80 ~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  143 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLM----------------RMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVV  143 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHH
Confidence            99999999999986543322                33889999999999999999999999999877779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++++++++++.|+  .+|+||
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  180 (246)
T 2uvd_A          144 GVTGN-------------------------------------------PGQANYVAAKAGVIGLTKTSAKELASRNITVN  180 (246)
T ss_dssp             HHHCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            76543                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....               ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       181 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~  244 (246)
T 2uvd_A          181 AIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTLNVDGGM  244 (246)
T ss_dssp             EEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcCc
Confidence            999999999986542               1358999999999999887788999999888763

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8.5e-41  Score=293.53  Aligned_cols=227  Identities=24%  Similarity=0.266  Sum_probs=194.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+..+ .+...+++... +.++.++.+|+++.++++++++++.+
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999996544 44444445443 45699999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|+|++++.++||++||.
T Consensus       104 ~~g~id~li~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  167 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVRDKLAI----------------KMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASI  167 (271)
T ss_dssp             HHSSCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             hcCCCCEEEECCCcCCCcccc----------------cCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            999999999999987654433                2388999999999999999999999999998888999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|++.++++++.|+  .+|+|
T Consensus       168 ~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  204 (271)
T 4iin_A          168 IGERGN-------------------------------------------MGQTNYSASKGGMIAMSKSFAYEGALRNIRF  204 (271)
T ss_dssp             HHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred             hhcCCC-------------------------------------------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEE
Confidence            876654                                           567899999999999999999998  58999


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++.+..               ...+|||+|+.+++++++.....+|+.+..++.-
T Consensus       205 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG~  269 (271)
T 4iin_A          205 NSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL  269 (271)
T ss_dssp             EEEEECSBCCC------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCCe
Confidence            9999999999986653               1348999999999999988888999999988753

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=1e-40  Score=292.41  Aligned_cols=228  Identities=22%  Similarity=0.244  Sum_probs=198.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.... +.++.++.+|++|.++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988887777776542 34688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+... .+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS  152 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTE----------------SFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTAS  152 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             HcCCCCEEEECCCcCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            99999999999998643 2222                338899999999999999999999999998877899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+++++++++++.|+  .+|+
T Consensus       153 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  189 (267)
T 1iy8_A          153 VGGIRGI-------------------------------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIR  189 (267)
T ss_dssp             GGGTSBC-------------------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhhccCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHHHhcCeE
Confidence            9887654                                           566899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++....                       ...+|||+|+.++++++++....+|+.+..++..
T Consensus       190 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  263 (267)
T 1iy8_A          190 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  263 (267)
T ss_dssp             EEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             EEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            99999999999874320                       1248999999999999988788999999988763

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=9.2e-41  Score=291.54  Aligned_cols=226  Identities=26%  Similarity=0.327  Sum_probs=193.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|++|||||++|||+++|++|+++|++|++++|++++ +++..+++....+.++.++.+|++|.++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999999999877 7777777755423468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||..+
T Consensus        82 g~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  145 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIE----------------DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHh
Confidence            9999999999986543322                238899999999999999999999999998877799999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       146 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  182 (260)
T 1x1t_A          146 LVAS-------------------------------------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANA  182 (260)
T ss_dssp             TSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEE
T ss_pred             CcCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEE
Confidence            7653                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC---------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA---------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|++....                           ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       183 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG~  257 (260)
T 1x1t_A          183 ICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGGW  257 (260)
T ss_dssp             EEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCCc
Confidence            99999999985421                           1248999999999999987778999999888753

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.7e-40  Score=294.78  Aligned_cols=227  Identities=21%  Similarity=0.218  Sum_probs=194.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.....+...+.....+.++.++.+|++|+++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999775544444443444457999999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||........               .+.+.++|++++++|+.++++++++++|+|++  .++||++||..
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~---------------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~  185 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGL---------------EYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIV  185 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSG---------------GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTH
T ss_pred             cCCCCEEEECCCCcCCCCCc---------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechH
Confidence            99999999999986432211               23388999999999999999999999999974  57999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++|+++++.|+  .+|+||
T Consensus       186 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  222 (291)
T 3ijr_A          186 AYEGN-------------------------------------------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVN  222 (291)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hcCCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence            77654                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccC----------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|.|++...                ....+|||+|+.+++++++.....+|+.+..++..
T Consensus       223 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  287 (291)
T 3ijr_A          223 GVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGGV  287 (291)
T ss_dssp             EEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred             EEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCCc
Confidence            99999999998532                12358999999999999988889999999998864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.6e-40  Score=289.91  Aligned_cols=226  Identities=24%  Similarity=0.279  Sum_probs=189.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++|.++++++++++.+
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI----GDAALAVAADISKEADVDAAVEAALS   79 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999988877776665    34689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC----CCeEEE
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD----SARIVN  156 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~----~~~iV~  156 (290)
                      .++++|+||||||+.......               .+.+.++|++++++|+.+++++++.++|+|+++.    .++||+
T Consensus        80 ~~g~id~li~~Ag~~~~~~~~---------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~  144 (261)
T 3n74_A           80 KFGKVDILVNNAGIGHKPQNA---------------ELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILN  144 (261)
T ss_dssp             HHSCCCEEEECCCCCCCSCCG---------------GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred             hcCCCCEEEECCccCCCCCCc---------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence            999999999999987532211               1238899999999999999999999999998653    578999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++...|++||+|+++++++++.|+  .
T Consensus       145 isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~  181 (261)
T 3n74_A          145 VASTGAGRPR-------------------------------------------PNLAWYNATKGWVVSVTKALAIELAPA  181 (261)
T ss_dssp             ECCTTTTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             eCchhhcCCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999887654                                           566889999999999999999998  4


Q ss_pred             CeEEEEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          235 NFCINCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+||+++|++....                   ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       182 gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~  254 (261)
T 3n74_A          182 KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGGR  254 (261)
T ss_dssp             TEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             CcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCCc
Confidence            89999999999999986642                   1358999999999999988889999999998864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.5e-40  Score=286.86  Aligned_cols=220  Identities=28%  Similarity=0.351  Sum_probs=191.0

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |. ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.
T Consensus         1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~   79 (247)
T 2jah_A            1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAG-AKVHVLELDVADRQGVDAAVASTV   79 (247)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHH
Confidence            54 4889999999999999999999999999999999999888888777776543 468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++ |+||++||
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS  142 (247)
T 2jah_A           80 EALGGLDILVNNAGIMLLGPVED----------------ADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSS  142 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCCSTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECC
T ss_pred             HHcCCCCEEEECCCCCCCCchhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEcc
Confidence            99999999999999875443332                38899999999999999999999999998766 99999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       143 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  179 (247)
T 2jah_A          143 IAGRVNV-------------------------------------------RNAAVYQATKFGVNAFSETLRQEVTERGVR  179 (247)
T ss_dssp             GGGTCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             HHhcCCC-------------------------------------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence            9887654                                           456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC--------------CC--CChhhhccchhhhhhccCCCCceeE
Q 039097          238 INCVCPGYVKTEMTYNA--------------GR--LTVEEGAESPVWLALLHKGGPSGLF  281 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------~~--~~~e~~a~~~~~l~~~~~~~~~g~~  281 (290)
                      ||+|+||++.|++....              +.  .+|||+|+.++++++.+....++.+
T Consensus       180 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i  239 (247)
T 2jah_A          180 VVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPHHATVHEI  239 (247)
T ss_dssp             EEEEEECSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHHHHSCTTEEEEEE
T ss_pred             EEEEECCCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHHhCCCccCccceE
Confidence            99999999999986432              12  6999999999999998776655554

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.1e-40  Score=292.67  Aligned_cols=228  Identities=21%  Similarity=0.210  Sum_probs=192.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|+++.++++++++++.++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            3688999999999999999999999999999999999987766655443    356899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+.........           ...+.+.++|++++++|+.++++++++++|+|+++. |+||++||..
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~-----------~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~  144 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALAD-----------LPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNA  144 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGG-----------SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGG
T ss_pred             cCCCCEEEECCCcCcccccccc-----------CChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecch
Confidence            9999999999998653322111           111235688999999999999999999999998654 8999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~  240 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+ ++|+||+
T Consensus       145 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~  181 (281)
T 3zv4_A          145 GFYPN-------------------------------------------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNG  181 (281)
T ss_dssp             GTSSS-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred             hccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence            87654                                           567899999999999999999998 5699999


Q ss_pred             eecceeecCcccCC-------------------------CCCChhhhccchhhhhh-ccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLAL-LHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~-~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|+|....                         +..+|||+|+.++++++ ......+|+.+..++..
T Consensus       182 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~  255 (281)
T 3zv4_A          182 VAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM  255 (281)
T ss_dssp             EEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred             EECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence            99999999986421                         13489999999999999 56677999999988764

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.5e-40  Score=292.97  Aligned_cols=227  Identities=29%  Similarity=0.317  Sum_probs=197.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+  ++.++.+|++|.++++++++++.+
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~  101 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG--DCQAIPADLSSEAGARRLAQALGE  101 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS--CEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--ceEEEEeeCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999888877777775433  688899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC----CeEEE
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS----ARIVN  156 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~----~~iV~  156 (290)
                      .++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|+++..    ++||+
T Consensus       102 ~~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~  165 (276)
T 2b4q_A          102 LSARLDILVNNAGTSWGAALES----------------YPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVIN  165 (276)
T ss_dssp             HCSCCSEEEECCCCCCCCCTTS----------------CCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEE
T ss_pred             hcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEE
Confidence            9999999999999875443332                388999999999999999999999999987655    89999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCch-hhhhhHHHHHHHHHHHHhhC--
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAA-AYILSKAAMNAYTRILAKKY--  233 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sKaa~~~~~~~la~e~--  233 (290)
                      +||..+..+.                                           ++.. .|++||++++.++++++.|+  
T Consensus       166 isS~~~~~~~-------------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~  202 (276)
T 2b4q_A          166 IGSVAGISAM-------------------------------------------GEQAYAYGPSKAALHQLSRMLAKELVG  202 (276)
T ss_dssp             ECCGGGTCCC-------------------------------------------CCSCTTHHHHHHHHHHHHHHHHHHHGG
T ss_pred             ECCHHHcCCC-------------------------------------------CCCccccHHHHHHHHHHHHHHHHHhcc
Confidence            9999876543                                           3345 89999999999999999998  


Q ss_pred             CCeEEEEeecceeecCcccC--------------C---CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          234 PNFCINCVCPGYVKTEMTYN--------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~--------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      .+|+||+|+||++.|++...              .   ...+|||+|+.++++++++....+|+.+..++..
T Consensus       203 ~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  274 (276)
T 2b4q_A          203 EHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF  274 (276)
T ss_dssp             GTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             cCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            48999999999999998542              1   1348999999999999988888999999988764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.5e-40  Score=289.14  Aligned_cols=228  Identities=27%  Similarity=0.304  Sum_probs=198.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++....+.++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999888887777776542346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  146 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNETIME----------------AADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASIC  146 (263)
T ss_dssp             HSSCSEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchh
Confidence            999999999999875443332                3889999999999999999999999999877779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       147 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  183 (263)
T 3ai3_A          147 AVQPL-------------------------------------------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVN  183 (263)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            87643                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccC------------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN------------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~------------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++...                        .   ...+|+|+|+.++++++.+....+|+.+..++..
T Consensus       184 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~  259 (263)
T 3ai3_A          184 CINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM  259 (263)
T ss_dssp             EEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTC
T ss_pred             EEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCCc
Confidence            99999999986321                        1   1358999999999999877778899999888753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-40  Score=290.47  Aligned_cols=226  Identities=28%  Similarity=0.314  Sum_probs=194.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|++|.++++++++++.+.+
T Consensus        18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4779999999999999999999999999999999999888887777776543 468899999999999999999999999


Q ss_pred             -CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 -GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       +++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++||++||..
T Consensus        97 ~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~  160 (273)
T 1ae1_A           97 DGKLNILVNNAGVVIHKEAKD----------------FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIA  160 (273)
T ss_dssp             TSCCCEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGG
T ss_pred             CCCCcEEEECCCCCCCCChhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHh
Confidence             89999999999875444332                3889999999999999999999999999887779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|++.++++++.|+  .+|+||
T Consensus       161 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  197 (273)
T 1ae1_A          161 GFSAL-------------------------------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVN  197 (273)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            87653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....                     ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       198 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  267 (273)
T 1ae1_A          198 SVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGF  267 (273)
T ss_dssp             EEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCCc
Confidence            999999999985431                     1348999999999999988788999999888753

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-40  Score=291.10  Aligned_cols=225  Identities=24%  Similarity=0.254  Sum_probs=196.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            36889999999999999999999999999999999999888887777776543 46889999999999999999999999


Q ss_pred             cCCccEEEEccccC-CCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++++|+||||||+. ...+..                +.+.++|++++++|+.++++++++++|.|++++.++||++||.
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~  145 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQ----------------DYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM  145 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             hCCCCEEEECCCCCCCCCccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcch
Confidence            99999999999986 333322                3388999999999999999999999999988777999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+++++++++++.|+  .+|+|
T Consensus       146 ~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  182 (262)
T 1zem_A          146 AGVKGP-------------------------------------------PNMAAYGTSKGAIIALTETAALDLAPYNIRV  182 (262)
T ss_dssp             HHHSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence            876543                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecCcccC--------------------C-----------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          239 NCVCPGYVKTEMTYN--------------------A-----------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       239 n~v~PG~v~T~~~~~--------------------~-----------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |+|+||++.|++...                    .           +..+|||+|+.+++++++.....+|+.+..+|
T Consensus       183 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG  261 (262)
T 1zem_A          183 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  261 (262)
T ss_dssp             EEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             EEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCC
Confidence            999999999997422                    0           12489999999999999888889999998876

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.3e-40  Score=287.29  Aligned_cols=223  Identities=25%  Similarity=0.307  Sum_probs=187.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|++ +++++   ++... +.++.++.+|++|.++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL-GRRVLTVKCDVSQPGDVEAFGKQVIST   79 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc-CCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            58899999999999999999999999999999999997 55544   33322 346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.++||++||..
T Consensus        80 ~g~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  143 (249)
T 2ew8_A           80 FGRCDILVNNAGIYPLIPFD----------------ELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT  143 (249)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchh
Confidence            99999999999986543322                33889999999999999999999999999887779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  180 (249)
T 2ew8_A          144 YWLKI-------------------------------------------EAYTHYISTKAANIGFTRALASDLGKDGITVN  180 (249)
T ss_dssp             GGSCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEE
Confidence            87653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCccc-CC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTY-NA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~-~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++.. ..                ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       181 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG~  246 (249)
T 2ew8_A          181 AIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM  246 (249)
T ss_dssp             EEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSSC
T ss_pred             EEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCCc
Confidence            9999999999865 21                1248999999999999987788999999888753

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-40  Score=287.94  Aligned_cols=221  Identities=26%  Similarity=0.303  Sum_probs=192.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|++++ ++..+++.     + .++.+|++|.++++++++++.+
T Consensus         1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-----G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-----C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-----C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            888999999999999999999999999999999999999877 65555553     3 7789999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|.|++++.++||++||.
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~  137 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALT----------------VRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV  137 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             HcCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccc
Confidence            9999999999999875443332                388999999999999999999999999998878999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||++++.++++++.|+  .+|+|
T Consensus       138 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  174 (256)
T 2d1y_A          138 QGLFAE-------------------------------------------QENAAYNASKGGLVNLTRSLALDLAPLRIRV  174 (256)
T ss_dssp             GGTSBC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cccCCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            887654                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecCcccC---------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYN---------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~---------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++...                     ....+|||+|+.++++++......+|+.+..++.
T Consensus       175 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          175 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             EEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            999999999987421                     0135899999999999998877889999888775

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=3.2e-40  Score=287.86  Aligned_cols=224  Identities=21%  Similarity=0.214  Sum_probs=194.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHH---CCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLAL---NGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~---~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++++|++|||||++|||+++|++|++   +|++|++++|+.+++++..+++.... +.++.++.+|+++.++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   89999999999988888888876553 357899999999999999999999


Q ss_pred             Hh--hcCCcc--EEEEccccCCC--CCCCCcccchhhhcccccccc-cChHHHHHhhhcccchHHHHHHHhchhhccC--
Q 039097           79 RS--HFGKLD--ILVNNAGITGI--SSDADTLSGFIEEGVARGKMT-QTYESAEKCLQTNYLGAKRMCEALIPLLQLS--  149 (290)
Q Consensus        79 ~~--~~~~id--~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~--  149 (290)
                      .+  .++++|  +||||||+...  .+..                + .+.++|++++++|+.++++++++++|.|+++  
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~----------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~  146 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFL----------------NVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPG  146 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGG----------------GCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTT
T ss_pred             HhccccccCCccEEEECCcccCCCCcchh----------------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            98  678899  99999998643  1111                2 3789999999999999999999999999877  


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                      ..|+||++||..+..+.                                           ++...|++||+|++++++++
T Consensus       147 ~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~l  183 (259)
T 1oaa_A          147 LSKTVVNISSLCALQPY-------------------------------------------KGWGLYCAGKAARDMLYQVL  183 (259)
T ss_dssp             CEEEEEEECCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCchhcCCC-------------------------------------------CCccHHHHHHHHHHHHHHHH
Confidence            56899999999887654                                           56689999999999999999


Q ss_pred             HhhCCCeEEEEeecceeecCcccC--------------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          230 AKKYPNFCINCVCPGYVKTEMTYN--------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       230 a~e~~~i~vn~v~PG~v~T~~~~~--------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +.|+++|+||+|+||++.|+|...                    ....+|||+|+.+++++.. ....+|+.+..++
T Consensus       184 a~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          184 AAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHHHHHhh-ccccCCcEEeccC
Confidence            999977999999999999998542                    1246999999999999985 5678999998764

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=3.3e-40  Score=283.51  Aligned_cols=223  Identities=24%  Similarity=0.294  Sum_probs=196.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999998888888886544567999999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++ ..+++|++||..+..
T Consensus        81 id~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~  143 (235)
T 3l77_A           81 VDVVVANAGLGYFKRLEE----------------LSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSAR  143 (235)
T ss_dssp             CSEEEECCCCCCCCCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSS
T ss_pred             CCEEEECCccccccCccc----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcc
Confidence            999999999876554433                389999999999999999999999999953 458999999988766


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      +.                                           ++...|++||+|+++++++++.+.++|+||+|+||
T Consensus       144 ~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG  180 (235)
T 3l77_A          144 LI-------------------------------------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPG  180 (235)
T ss_dssp             CC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEC
T ss_pred             cC-------------------------------------------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCC
Confidence            53                                           45689999999999999999888789999999999


Q ss_pred             eeecCcccCCC-------CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          245 YVKTEMTYNAG-------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v~T~~~~~~~-------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++|++.....       ..+|||+|+.+++++..+....+|+++..++.
T Consensus       181 ~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~~~  230 (235)
T 3l77_A          181 AVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRSVY  230 (235)
T ss_dssp             SBSSSTTTCCSCCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECCTT
T ss_pred             ccccccccccCCcccccCCCCHHHHHHHHHHHHcCCCCCccceEEEeecc
Confidence            99999976642       36999999999999999998889998776654

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.9e-40  Score=290.23  Aligned_cols=230  Identities=22%  Similarity=0.234  Sum_probs=201.4

Q ss_pred             CcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccH-HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGG-LEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         2 ~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .++++|++|||||+  +|||+++|++|+++|++|++++|+..+. ++..+++....+.++.++.+|++|.++++++++++
T Consensus        16 ~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (267)
T 3gdg_A           16 LSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDV   95 (267)
T ss_dssp             HCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHH
T ss_pred             cCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHH
Confidence            36789999999999  9999999999999999999999987765 67777776555567999999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|+|++++.++||++|
T Consensus        96 ~~~~g~id~li~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~is  159 (267)
T 3gdg_A           96 VADFGQIDAFIANAGATADSGILD----------------GSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITA  159 (267)
T ss_dssp             HHHTSCCSEEEECCCCCCCSCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             HHHcCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEc
Confidence            999999999999999876554433                3899999999999999999999999999988889999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeE
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFC  237 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~  237 (290)
                      |..+..+..                                         +++...|++||+|+++++++++.|+ +.|+
T Consensus       160 S~~~~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~  198 (267)
T 3gdg_A          160 SMSGHIANF-----------------------------------------PQEQTSYNVAKAGCIHMARSLANEWRDFAR  198 (267)
T ss_dssp             CGGGTSCCS-----------------------------------------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCE
T ss_pred             cccccccCC-----------------------------------------CCCCCcchHHHHHHHHHHHHHHHHhccCcE
Confidence            998765420                                         1356899999999999999999999 4599


Q ss_pred             EEEeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++.+..+               ..+|||+|+.+++++++.....+|+.+..++.-
T Consensus       199 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG~  264 (267)
T 3gdg_A          199 VNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTTGADLLIDGGY  264 (267)
T ss_dssp             EEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             EEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccccccCCEEEECCce
Confidence            999999999999976532               236999999999999988889999999988764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-40  Score=292.78  Aligned_cols=235  Identities=22%  Similarity=0.282  Sum_probs=194.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC------------cccHHHHHHHHHhcCCCcEEEEEeeCCCH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD------------EKGGLEAVEKLKHSGFDNVIFHQLDVADP   68 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~   68 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+            ...+++...++... +.++.++.+|++|.
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT-GRKAYTAEVDVRDR   83 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT-TSCEEEEECCTTCH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc-CCceEEEEccCCCH
Confidence            778999999999999999999999999999999999997            44455555555444 35699999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL  148 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~  148 (290)
                      ++++++++++.++++++|+||||||+.....                  +.+.++|++++++|+.++++++++++|+|+ 
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~------------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-  144 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLGA------------------HLPVQAFADAFDVDFVGVINTVHAALPYLT-  144 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCT------------------TCCTHHHHHHHHHHTHHHHHHHHHHGGGCC-
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCcccC------------------cCCHHHHHHHhhhhhhhhHHHHHHHHHHhh-
Confidence            9999999999999999999999999865331                  127899999999999999999999999994 


Q ss_pred             CCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          149 SDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       149 ~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                       ..++||++||..+..+....                               +.. .....++...|++||+|+++++++
T Consensus       145 -~~g~iv~isS~~~~~~~~~~-------------------------------~~~-~~~~~~~~~~Y~asK~a~~~~~~~  191 (287)
T 3pxx_A          145 -SGASIITTGSVAGLIAAAQP-------------------------------PGA-GGPQGPGGAGYSYAKQLVDSYTLQ  191 (287)
T ss_dssp             -TTCEEEEECCHHHHHHHHCC-------------------------------C------CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -cCcEEEEeccchhccccccc-------------------------------ccc-cccCCCccchHHHHHHHHHHHHHH
Confidence             46899999998876543100                               000 000003457899999999999999


Q ss_pred             HHhhC--CCeEEEEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhccCCC
Q 039097          229 LAKKY--PNFCINCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHKGG  276 (290)
Q Consensus       229 la~e~--~~i~vn~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~~~  276 (290)
                      ++.|+  .+|+||+|+||+|.|++.+.                              .+..+|||+|+.++|++++....
T Consensus       192 la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~  271 (287)
T 3pxx_A          192 LAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRY  271 (287)
T ss_dssp             HHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcC
Confidence            99999  38999999999999998753                              12347899999999999988889


Q ss_pred             CceeEeecCccc
Q 039097          277 PSGLFFSRKEET  288 (290)
Q Consensus       277 ~~g~~~~~~~~~  288 (290)
                      .+|+.+..++..
T Consensus       272 itG~~i~vdGG~  283 (287)
T 3pxx_A          272 VTGLQFKVDAGA  283 (287)
T ss_dssp             CCSCEEEESTTG
T ss_pred             CCCceEeECchh
Confidence            999999998864

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=4.4e-40  Score=292.50  Aligned_cols=227  Identities=22%  Similarity=0.204  Sum_probs=193.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+..  ..++..+.+.. .+.++.++.+|++|.++++++++++.
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE-CGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH-TTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH-cCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998733  33444444443 34568999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|+||||||.......               +.+.+.++|++++++|+.++++++++++|+|++  +|+||++||
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~---------------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS  186 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPE---------------IKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSS  186 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSS---------------GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECC
T ss_pred             HHcCCCCEEEECCCCcCCCCC---------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECC
Confidence            999999999999998643221               123489999999999999999999999999974  489999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++|+++++.|+  .+|+
T Consensus       187 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  223 (294)
T 3r3s_A          187 IQAYQPS-------------------------------------------PHLLDYAATKAAILNYSRGLAKQVAEKGIR  223 (294)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             hhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            9887654                                           567899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccC-----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcccc
Q 039097          238 INCVCPGYVKTEMTYN-----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL  289 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~-----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~  289 (290)
                      ||+|+||+|+|++...                 ....+|||+|+.+++++++.....+|+.+..++...
T Consensus       224 vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  292 (294)
T 3r3s_A          224 VNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGGEH  292 (294)
T ss_dssp             EEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             EEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            9999999999998321                 023589999999999999888899999999988643

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.8e-40  Score=299.12  Aligned_cols=225  Identities=24%  Similarity=0.295  Sum_probs=195.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-------HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-------GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|+.++       +++..+++...+ .++.++.+|++|+++++++
T Consensus        41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG-GKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHH
Confidence            46789999999999999999999999999999999999775       455666665544 4689999999999999999


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      ++++.++++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++|
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~I  183 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAISLTNTLD----------------TPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHI  183 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEE
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEE
Confidence            9999999999999999999876554433                389999999999999999999999999998888999


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+..                                         .++...|++||+|+++++++++.|+ 
T Consensus       184 V~iSS~~~~~~~~-----------------------------------------~~~~~~Y~aSKaal~~l~~~la~e~~  222 (346)
T 3kvo_A          184 LNISPPLNLNPVW-----------------------------------------FKQHCAYTIAKYGMSMYVLGMAEEFK  222 (346)
T ss_dssp             EEECCCCCCCGGG-----------------------------------------TSSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEECCHHHcCCCC-----------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhc
Confidence            9999998876420                                         0456899999999999999999999 


Q ss_pred             CCeEEEEeecce-eecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          234 PNFCINCVCPGY-VKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       234 ~~i~vn~v~PG~-v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .+|+||+|+||+ +.|++.+..       ...+||++|+.++++++. ....+|+++ .++
T Consensus       223 ~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~itG~~i-vdg  281 (346)
T 3kvo_A          223 GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIFQK-PKSFTGNFV-IDE  281 (346)
T ss_dssp             TTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHHHHHTS-CTTCCSCEE-EHH
T ss_pred             CCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHHHHHhc-CCCCCceEE-ECC
Confidence            589999999995 999875442       246999999999999998 778899998 443

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-40  Score=284.85  Aligned_cols=220  Identities=25%  Similarity=0.241  Sum_probs=192.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++      .+.++.+|++|.++++++++++.+++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAHL   75 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------CCEEEEecCCCHHHHHHHHHHHHHHc
Confidence            588999999999999999999999999999999999987666554433      17788999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||.. 
T Consensus        76 g~id~lvn~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-  138 (245)
T 1uls_A           76 GRLDGVVHYAGITRDNFHW----------------KMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-  138 (245)
T ss_dssp             SSCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-
Confidence            9999999999986543322                33889999999999999999999999999988789999999987 


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       139 ~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  175 (245)
T 1uls_A          139 YLGN-------------------------------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNT  175 (245)
T ss_dssp             GGCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             hcCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEE
Confidence            5432                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++....               ...+|+|+|+.+++++++.....+|+.+..++..
T Consensus       176 v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~  238 (245)
T 1uls_A          176 LAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (245)
T ss_dssp             EEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence            99999999986542               1358999999999999988788999999888753

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-40  Score=297.27  Aligned_cols=242  Identities=18%  Similarity=0.156  Sum_probs=197.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHH----------
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA----------   69 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~----------   69 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++ |+.+++++..+++....+.++.++.+|+++.+          
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  120 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS  120 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccc
Confidence            4458899999999999999999999999999999999 99888888887776334457999999999999          


Q ss_pred             -------HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHh
Q 039097           70 -------AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEAL  142 (290)
Q Consensus        70 -------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~  142 (290)
                             +++++++++.++++++|+||||||+....+..+.. .. .........+.+.++|++++++|+.+++++++++
T Consensus       121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~-~~-~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  198 (328)
T 2qhx_A          121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRND-ED-GHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  198 (328)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC---------------CHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcC-cc-ccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence                   99999999999999999999999987544332220 00 0000000111128999999999999999999999


Q ss_pred             chhhccCC------CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhh
Q 039097          143 IPLLQLSD------SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYI  216 (290)
Q Consensus       143 ~~~l~~~~------~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~  216 (290)
                      +|.|++++      .++||++||..+..+.                                           ++...|+
T Consensus       199 ~~~m~~~~~~~~~~~g~IV~isS~~~~~~~-------------------------------------------~~~~~Y~  235 (328)
T 2qhx_A          199 AHRVAGTPAKHRGTNYSIINMVDAMTNQPL-------------------------------------------LGYTIYT  235 (328)
T ss_dssp             HHHHHHSCGGGSCSCEEEEEECCTTTTSCC-------------------------------------------TTCHHHH
T ss_pred             HHHHHhcCCcCCCCCcEEEEECchhhccCC-------------------------------------------CCcHHHH
Confidence            99998776      7899999999887654                                           5668999


Q ss_pred             hhHHHHHHHHHHHHhhC--CCeEEEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCce
Q 039097          217 LSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSG  279 (290)
Q Consensus       217 ~sKaa~~~~~~~la~e~--~~i~vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g  279 (290)
                      +||+|+++|+++|+.|+  .+|+||+|+||+|.|++ ...               ...+|||+|+.+++++++.....+|
T Consensus       236 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG  314 (328)
T 2qhx_A          236 MAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITG  314 (328)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999999  48999999999999998 321               2358999999999999987888999


Q ss_pred             eEeecCccc
Q 039097          280 LFFSRKEET  288 (290)
Q Consensus       280 ~~~~~~~~~  288 (290)
                      +++..++..
T Consensus       315 ~~i~vdGG~  323 (328)
T 2qhx_A          315 TCVKVDGGY  323 (328)
T ss_dssp             CEEEESTTG
T ss_pred             cEEEECCCc
Confidence            999988763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=2.8e-40  Score=289.90  Aligned_cols=226  Identities=25%  Similarity=0.264  Sum_probs=195.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++|++|||||++|||+++|++|+++|++|++.+ |+.+..++..+++... +.++.++.+|++|.++++++++++.+.
T Consensus        22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-GRDFKAYAVDVADFESCERCAEKVLAD  100 (269)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999998 4555455555555443 356899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus       101 ~g~id~li~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~  164 (269)
T 3gk3_A          101 FGKVDVLINNAGITRDATFMK----------------MTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVN  164 (269)
T ss_dssp             HSCCSEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             cCCCCEEEECCCcCCCcchhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChh
Confidence            999999999999876544333                3899999999999999999999999999888889999999988


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       165 ~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~  201 (269)
T 3gk3_A          165 GSRGA-------------------------------------------FGQANYASAKAGIHGFTKTLALETAKRGITVN  201 (269)
T ss_dssp             HHHCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence            77654                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++.+...                ..+|+|+|+.++++++......+|+.+..++..
T Consensus       202 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~  266 (269)
T 3gk3_A          202 TVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGGM  266 (269)
T ss_dssp             EEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTS
T ss_pred             EEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCCE
Confidence            9999999999876531                238999999999999988888999999998864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=4.8e-40  Score=291.19  Aligned_cols=237  Identities=19%  Similarity=0.194  Sum_probs=193.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCC----HHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVAD----PAAIHSVAD   76 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~----~~~v~~~~~   76 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+. +++++..+++....+.++.++.+|+++    .++++++++
T Consensus        19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~   98 (288)
T 2x9g_A           19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN   98 (288)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence            467899999999999999999999999999999999998 777777777763344578999999999    999999999


Q ss_pred             HHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC------
Q 039097           77 FIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD------  150 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~------  150 (290)
                      ++.+.++++|+||||||+....+.....   .   ..+.....+.++|++++++|+.+++++++.++|.|+++.      
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  172 (288)
T 2x9g_A           99 SCFRAFGRCDVLVNNASAFYPTPLVQGD---H---EDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSS  172 (288)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCCC--------------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CC
T ss_pred             HHHHhcCCCCEEEECCCCCCCCcccccc---c---hhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCC
Confidence            9999999999999999987543321000   0   000001147899999999999999999999999998765      


Q ss_pred             CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 039097          151 SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA  230 (290)
Q Consensus       151 ~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la  230 (290)
                      .++||++||..+..+.                                           ++...|++||+|+++|+++++
T Consensus       173 ~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la  209 (288)
T 2x9g_A          173 NLSIVNLCDAMVDQPC-------------------------------------------MAFSLYNMGKHALVGLTQSAA  209 (288)
T ss_dssp             CEEEEEECCTTTTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecccccCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHH
Confidence            6899999999887654                                           556899999999999999999


Q ss_pred             hhC--CCeEEEEeecceeecCcccC-----------C---CC-CChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          231 KKY--PNFCINCVCPGYVKTEMTYN-----------A---GR-LTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       231 ~e~--~~i~vn~v~PG~v~T~~~~~-----------~---~~-~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      .|+  .+|+||+|+||++.|++ ..           .   .. .+||++|+.++++++......+|+++..++..
T Consensus       210 ~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~  283 (288)
T 2x9g_A          210 LELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL  283 (288)
T ss_dssp             HHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             HHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence            998  48999999999999998 21           1   12 69999999999999988888999999988763

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=4.4e-40  Score=287.24  Aligned_cols=225  Identities=27%  Similarity=0.328  Sum_probs=197.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|++|.++++++++++.+++
T Consensus         6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999888887777776543 468899999999999999999999999


Q ss_pred             -CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 -GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||..
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  148 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAK----------------DYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS  148 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGG
T ss_pred             CCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchh
Confidence             8999999999986543322                23889999999999999999999999999888789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       149 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  185 (260)
T 2ae2_A          149 GALAV-------------------------------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN  185 (260)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            76543                                           456899999999999999999999  489999


Q ss_pred             EeecceeecCcccC--------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN--------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~--------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++...                    ....+|||+|+.+++++++.....+|+.+..++.
T Consensus       186 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          186 GVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             EEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            99999999987431                    0135899999999999988777899999988875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=3.5e-40  Score=286.90  Aligned_cols=226  Identities=26%  Similarity=0.306  Sum_probs=198.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++|++|||||++|||+++|++|+++|++|++.+ |+....++..+++...+ .++.++.+|++|.++++++++++.++
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALG-FDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC-CeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            46799999999999999999999999999999988 67777777777776544 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|+|++++.++||++||..
T Consensus        89 ~g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  152 (256)
T 3ezl_A           89 VGEIDVLVNNAGITRDVVFRK----------------MTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVN  152 (256)
T ss_dssp             TCCEEEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCC
T ss_pred             cCCCCEEEECCCCCCCCchhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchh
Confidence            999999999999876544333                3899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       153 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  189 (256)
T 3ezl_A          153 GQKGQ-------------------------------------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVN  189 (256)
T ss_dssp             GGGSC-------------------------------------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence            87754                                           567899999999999999999998  489999


Q ss_pred             EeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++.+...               ..+|||+|+.++++++......+|+.+..++..
T Consensus       190 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~  253 (256)
T 3ezl_A          190 TVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGL  253 (256)
T ss_dssp             EEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCE
Confidence            9999999999876532               348999999999999988888999999988764

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=6.1e-40  Score=291.45  Aligned_cols=229  Identities=17%  Similarity=0.211  Sum_probs=189.0

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |.++++|++|||||+  +|||+++|++|+++|++|++++|++.. .+..+++....+ ++.++.||++|.++++++++++
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~  103 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEELG-AFVAGHCDVADAASIDAVFETL  103 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHH
Confidence            457899999999999  559999999999999999999999543 333444433332 4889999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+.....            ....+.+.+.++|++++++|+.++++++++++|+|++  .|+||++|
T Consensus       104 ~~~~g~iD~lVnnAG~~~~~~------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~is  169 (293)
T 3grk_A          104 EKKWGKLDFLVHAIGFSDKDE------------LTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLT  169 (293)
T ss_dssp             HHHTSCCSEEEECCCCCCHHH------------HTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEE
T ss_pred             HHhcCCCCEEEECCccCCccc------------ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEe
Confidence            999999999999999874200            0011223489999999999999999999999999984  68999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++|+++++.|+  .+|
T Consensus       170 S~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI  206 (293)
T 3grk_A          170 YYGAEKVM-------------------------------------------PNYNVMGVAKAALEASVKYLAVDLGPQNI  206 (293)
T ss_dssp             CGGGTSBC-------------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             ehhhccCC-------------------------------------------CchHHHHHHHHHHHHHHHHHHHHHhHhCC
Confidence            99887654                                           566899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||+|.|++.+...                 ..+|||+|+.+++++++.....+|+.+..++..
T Consensus       207 ~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  275 (293)
T 3grk_A          207 RVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGY  275 (293)
T ss_dssp             EEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCCcceEEEECCCc
Confidence            9999999999999866532                 358999999999999988889999999988764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1e-39  Score=285.64  Aligned_cols=229  Identities=17%  Similarity=0.184  Sum_probs=194.9

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+....+...+........++.++.+|++|.++++++++++.+
T Consensus         4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (266)
T 3oig_A            4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE   83 (266)
T ss_dssp             CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence            7899999999999  66999999999999999999999965444433333333433799999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+......            .....+.+.++|++++++|+.+++++++.++|+|++  .++||++||.
T Consensus        84 ~~g~id~li~~Ag~~~~~~~------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~  149 (266)
T 3oig_A           84 QVGVIHGIAHCIAFANKEEL------------VGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYL  149 (266)
T ss_dssp             HHSCCCEEEECCCCCCGGGG------------SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECG
T ss_pred             HhCCeeEEEEcccccccccc------------ccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecc
Confidence            99999999999998752110            112234589999999999999999999999999973  5899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++|+++++.|+  .+|+|
T Consensus       150 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  186 (266)
T 3oig_A          150 GGELVM-------------------------------------------PNYNVMGVAKASLDASVKYLAADLGKENIRV  186 (266)
T ss_dssp             GGTSCC-------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cccccC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            887654                                           567899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+|.|++.+...                 ..+|+|+|+.++++++......+|+.+..++.-
T Consensus       187 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG~  253 (266)
T 3oig_A          187 NSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGF  253 (266)
T ss_dssp             EEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCCe
Confidence            99999999999876532                 358999999999999988888999999988753

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.8e-40  Score=290.19  Aligned_cols=216  Identities=31%  Similarity=0.382  Sum_probs=190.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.....           ..+..+++|++|.++++++++++.+++
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------NVSDHFKIDVTNEEEVKEAVEKTTKKY   79 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------TSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------CceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999876431           246788999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus        80 g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~  143 (269)
T 3vtz_A           80 GRIDILVNNAGIEQYSPLH----------------LTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS  143 (269)
T ss_dssp             SCCCEEEECCCCCCCCCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh
Confidence            9999999999987544433                238899999999999999999999999999888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v  241 (290)
                      ..+.                                           ++...|++||+|+++|+++++.|+ ++|+||+|
T Consensus       144 ~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v  180 (269)
T 3vtz_A          144 YAAT-------------------------------------------KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAV  180 (269)
T ss_dssp             TSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred             ccCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            7654                                           567899999999999999999998 68999999


Q ss_pred             ecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          242 CPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       242 ~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|.|++....                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       181 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  253 (269)
T 3vtz_A          181 CPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGGL  253 (269)
T ss_dssp             EECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence            9999999985321                          1348999999999999988889999999988753

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3e-40  Score=291.38  Aligned_cols=232  Identities=26%  Similarity=0.262  Sum_probs=197.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCC--cEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+..  ++.++.+|++|.++++++++++
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999998888877777654421  6899999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+....+...            ...+.+.++|++++++|+.+++++++.++|.|++++ ++||++|
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~------------~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~is  147 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGT------------TGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVS  147 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCC------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCc------------ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEec
Confidence            999999999999999865433100            012348899999999999999999999999998665 9999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                          .++...|++||+++++++++++.|+  .+|
T Consensus       148 S~~~~~~~------------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi  185 (280)
T 1xkq_A          148 SIVAGPQA------------------------------------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGI  185 (280)
T ss_dssp             CGGGSSSC------------------------------------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CccccCCC------------------------------------------CCcccHHHHHHHHHHHHHHHHHHHhccCCe
Confidence            98776532                                          0345789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhcc-CCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~~~~  287 (290)
                      +||+|+||++.|++....                        ...+|||+|+.++++++.+ ....+|+.+..++.
T Consensus       186 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          186 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             EEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            999999999999974321                        1358999999999999887 67889999988875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-40  Score=289.87  Aligned_cols=222  Identities=25%  Similarity=0.256  Sum_probs=192.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.    .++.++.+|++|.++++++++++.+
T Consensus         1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~   76 (263)
T 2a4k_A            1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVSDPKAVEAVFAEALE   76 (263)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC----SSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHH
Confidence            788999999999999999999999999999999999999877666555442    4688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+| ++ .++||++||.
T Consensus        77 ~~g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~  138 (263)
T 2a4k_A           77 EFGRLHGVAHFAGVAHSALSW----------------NLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSV  138 (263)
T ss_dssp             HHSCCCEEEEGGGGTTTTC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCC
T ss_pred             HcCCCcEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecc
Confidence            999999999999987544333                23889999999999999999999999999 54 7899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+. +.                                           ++...|++||+++++++++++.|+  .+|+|
T Consensus       139 ~~~-~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  174 (263)
T 2a4k_A          139 AGL-GA-------------------------------------------FGLAHYAAGKLGVVGLARTLALELARKGVRV  174 (263)
T ss_dssp             TTC-CH-------------------------------------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEE
T ss_pred             hhc-CC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence            887 43                                           345789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++....               ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       175 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG~  239 (263)
T 2a4k_A          175 NVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR  239 (263)
T ss_dssp             EEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEEECCCc
Confidence            9999999999986542               1358999999999999988888999999888753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.1e-40  Score=286.76  Aligned_cols=227  Identities=26%  Similarity=0.295  Sum_probs=178.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999998888888886654 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+......             ....+.+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus        84 ~g~id~li~~Ag~~~~~~~-------------~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  150 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKL-------------DFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTA  150 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGG-------------GCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--
T ss_pred             cCCCCEEEECCCcCCCCCC-------------cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcc
Confidence            9999999999998532111             112234899999999999999999999999999988889999999997


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..                                              +...|++||+|+++++++++.|+  .+|+||
T Consensus       151 ~~~----------------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  184 (253)
T 3qiv_A          151 AWL----------------------------------------------YSNYYGLAKVGINGLTQQLSRELGGRNIRIN  184 (253)
T ss_dssp             -------------------------------------------------------CCHHHHHHHHHHHHHHTTTTTEEEE
T ss_pred             ccC----------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            753                                              23679999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++.+...                ..+|+|+|+.++++++......+|+.+..++..
T Consensus       185 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  249 (253)
T 3qiv_A          185 AIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGGQ  249 (253)
T ss_dssp             EEEC-------------------------------CCHHHHHHHHHHSGGGTTCCSCEEEC----
T ss_pred             EEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCCe
Confidence            9999999999865421                247999999999999988888999999988754

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.9e-41  Score=293.62  Aligned_cols=217  Identities=28%  Similarity=0.320  Sum_probs=189.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+...+            ...+.+|+++.++++++++++.+
T Consensus        23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~------------~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA------------DLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC------------SEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh------------hhccCcCCCCHHHHHHHHHHHHH
Confidence            667899999999999999999999999999999999998654321            23458999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||.
T Consensus        91 ~~g~iD~lvnnAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~  154 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVISRGRIT----------------ETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASC  154 (266)
T ss_dssp             HHSCCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred             hcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCH
Confidence            999999999999987654433                3389999999999999999999999999998888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+  .+|+|
T Consensus       155 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  191 (266)
T 3uxy_A          155 WGLRPG-------------------------------------------PGHALYCLTKAALASLTQCMGMDHAPQGIRI  191 (266)
T ss_dssp             BTTBCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HhCCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            887654                                           567899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++.+..                      ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       192 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  263 (266)
T 3uxy_A          192 NAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGK  263 (266)
T ss_dssp             EEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCE
Confidence            9999999999975321                      2348999999999999998889999999998864

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.3e-40  Score=288.21  Aligned_cols=222  Identities=26%  Similarity=0.297  Sum_probs=194.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++.++.+|+++.++++++++++.+++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999987766655554    2368889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||..+
T Consensus        78 g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLE----------------TESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG  141 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh
Confidence            9999999999986543322                238899999999999999999999999998877799999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       142 ~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  178 (254)
T 1hdc_A          142 LMGL-------------------------------------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS  178 (254)
T ss_dssp             TSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             ccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            7653                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC---------------CCC-ChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA---------------GRL-TVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~-~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||++.|++.+..               ... +|||+|+.+++++++.....+|+.+..++.
T Consensus       179 v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          179 VHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             EEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            99999999974320               124 899999999999998877899999988875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-40  Score=293.33  Aligned_cols=230  Identities=26%  Similarity=0.281  Sum_probs=196.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCC--cEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+..  ++.++.+|++|.++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            66789999999999999999999999999999999999998888877777654431  6899999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+....+.              .+.+.+.++|++++++|+.++++++++++|.|++++ |+||++|
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~--------------~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~is  165 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGT--------------ANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVS  165 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSC--------------CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEC
T ss_pred             HHhcCCCCEEEECCCcCcCCCC--------------ccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEc
Confidence            9999999999999998654320              012348899999999999999999999999998776 9999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                          .++...|++||+|+++++++++.|+  .+|
T Consensus       166 S~~~~~~~------------------------------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI  203 (297)
T 1xhl_A          166 SIVAGPQA------------------------------------------HSGYPYYACAKAALDQYTRCTAIDLIQHGV  203 (297)
T ss_dssp             CGGGSSSC------------------------------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred             CchhccCC------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCe
Confidence            98776532                                          0345789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhcc-CCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~~~~  287 (290)
                      +||+|+||++.|++....                        ...+|||+|+.+++++++. ....+|+.+..++.
T Consensus       204 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG  279 (297)
T 1xhl_A          204 RVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG  279 (297)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             EEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCC
Confidence            999999999999984321                        1358999999999999887 67899999988875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=4.3e-40  Score=287.27  Aligned_cols=226  Identities=19%  Similarity=0.130  Sum_probs=196.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++.... +.++.++.+|++|.++++++++++.+.
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL   83 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            5889999999999999999999999999999999999888887777776432 226889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++ +|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus        84 ~g-id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  146 (260)
T 2z1n_A           84 GG-ADILVYSTGGPRPGRFM----------------ELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVT  146 (260)
T ss_dssp             TC-CSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cC-CCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence            98 99999999976443322                33889999999999999999999999999887779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++++++++++.|+  .+|+||
T Consensus       147 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  183 (260)
T 2z1n_A          147 LLRPW-------------------------------------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVN  183 (260)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            87653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCccc----------CC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTY----------NA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~----------~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++..          ..                ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       184 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~  258 (260)
T 2z1n_A          184 AVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGGA  258 (260)
T ss_dssp             EEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             EEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            9999999999865          11                0238999999999999988888999999988753

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.3e-40  Score=290.82  Aligned_cols=227  Identities=28%  Similarity=0.384  Sum_probs=198.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   95 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAVVE   95 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999888887777776544 4588999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchh--hccCCCCeEEEEc
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL--LQLSDSARIVNVS  158 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~--l~~~~~~~iV~is  158 (290)
                      .++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.  |++++.++||++|
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~is  159 (277)
T 2rhc_B           96 RYGPVDVLVNNAGRPGGGATA----------------ELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIA  159 (277)
T ss_dssp             HTCSCSEEEECCCCCCCSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEEC
T ss_pred             HhCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEEC
Confidence            999999999999986543322                3388999999999999999999999999  8877678999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||++++.++++++.|+  .+|
T Consensus       160 S~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi  196 (277)
T 2rhc_B          160 STGGKQGV-------------------------------------------VHAAPYSASKHGVVGFTKALGLELARTGI  196 (277)
T ss_dssp             CGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred             ccccccCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            99876653                                           456899999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||++.|++....                          ...+|+|+|+.++++++.+....+|+.+..++.
T Consensus       197 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          197 TVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             EEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            999999999999974211                          135899999999999998877899999988875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1e-39  Score=285.14  Aligned_cols=223  Identities=26%  Similarity=0.313  Sum_probs=194.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++..    .+.++.+|++|.++++++++++.++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD----AARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG----GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc----CceEEEecCCCHHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999999998777766665532    4788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~  142 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIED----------------YALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE  142 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehh
Confidence            999999999999875443332                3889999999999999999999999999887779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++++++++++.|+  .+|+||
T Consensus       143 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  179 (260)
T 1nff_A          143 GLAGT-------------------------------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVN  179 (260)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhCccCcEEE
Confidence            87653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccC----------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN----------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~----------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++...          ....+|+|+|+.++++++......+|+.+..++.
T Consensus       180 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          180 SIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             EEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeCCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            99999999998541          1235899999999999988777889999888775

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.2e-39  Score=284.36  Aligned_cols=226  Identities=24%  Similarity=0.288  Sum_probs=197.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+.+
T Consensus        11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           11 PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEG-LSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999999888877777776544 458899999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+||||||+... .+.                .+.+.++|++++++|+.++++++++++|+|++++.++||++||..
T Consensus        90 g~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  153 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNI----------------IDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVG  153 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCG----------------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGG
T ss_pred             CCCCEEEECCCCCCCCCCc----------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechh
Confidence            999999999997532 221                233889999999999999999999999999888789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       154 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  190 (260)
T 2zat_A          154 AYHPF-------------------------------------------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVN  190 (260)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            87643                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccC-----------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN-----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~-----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++...                 ....+|||+|+.++++++......+|+.+..++..
T Consensus       191 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~  256 (260)
T 2zat_A          191 CLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGT  256 (260)
T ss_dssp             EEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             EEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCc
Confidence            99999999998532                 12458999999999999988778899999888754

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=6.1e-40  Score=286.03  Aligned_cols=224  Identities=24%  Similarity=0.267  Sum_probs=194.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc--HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG--GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++|++|||||++|||+++|++|+++|++|++++|+.++  +++..+++...+ .++.++.+|++|.++++++++++.+++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            37999999999999999999999999999999999877  677777775543 468999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC-CeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~-~~iV~isS~~  161 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++. ++||++||..
T Consensus        80 g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  143 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLL----------------EVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIA  143 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGG
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcch
Confidence            9999999999986543322                3388999999999999999999999999987766 8999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++++++++++.|+  .+|+||
T Consensus       144 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn  180 (258)
T 3a28_C          144 AIQGF-------------------------------------------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVN  180 (258)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence            77654                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccC-----------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN-----------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~-----------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++...                       .   ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       181 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  255 (258)
T 3a28_C          181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM  255 (258)
T ss_dssp             EEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             EEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence            99999999997431                       0   1348999999999999988888999999988763

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=5.6e-40  Score=285.91  Aligned_cols=223  Identities=24%  Similarity=0.328  Sum_probs=195.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|++|.++++++++++.++++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            6899999999999999999999999999999999888887777776543 468899999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCcc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGKL  164 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~~  164 (290)
                      |+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..
T Consensus        81 d~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  144 (256)
T 1geg_A           81 DVIVNNAGVAPSTPIE----------------SITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV  144 (256)
T ss_dssp             CEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             CEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC
Confidence            9999999986443322                338899999999999999999999999998766 68999999998876


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|++||+++++++++++.|+  .+|+||+|+
T Consensus       145 ~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~  181 (256)
T 1geg_A          145 GN-------------------------------------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC  181 (256)
T ss_dssp             CC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             CC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEE
Confidence            54                                           456899999999999999999998  489999999


Q ss_pred             cceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          243 PGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       243 PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||++.|++....                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       182 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  253 (256)
T 1geg_A          182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  253 (256)
T ss_dssp             ECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             ECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence            999999874311                          1358999999999999988888999999988763

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=2e-40  Score=298.35  Aligned_cols=226  Identities=23%  Similarity=0.285  Sum_probs=198.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC----------cccHHHHHHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD----------EKGGLEAVEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+          .+..++..+++...+ .++.++.+|++|.++
T Consensus        22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~  100 (322)
T 3qlj_A           22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-GEAVADGSNVADWDQ  100 (322)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-CEEEEECCCTTSHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-CcEEEEECCCCCHHH
Confidence            667899999999999999999999999999999999998          666777777776654 468999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD  150 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~  150 (290)
                      ++++++++.++++++|+||||||+....+..                +.+.++|++++++|+.+++++++++.|+|++..
T Consensus       101 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~  164 (322)
T 3qlj_A          101 AAGLIQTAVETFGGLDVLVNNAGIVRDRMIA----------------NTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLS  164 (322)
T ss_dssp             HHHHHHHHHHHHSCCCEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcc
Confidence            9999999999999999999999987654433                338999999999999999999999999987432


Q ss_pred             ------CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHH
Q 039097          151 ------SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNA  224 (290)
Q Consensus       151 ------~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~  224 (290)
                            +|+||++||..+..+.                                           ++...|++||+|+++
T Consensus       165 ~~~~~~~g~IV~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~  201 (322)
T 3qlj_A          165 KAGKAVDGRIINTSSGAGLQGS-------------------------------------------VGQGNYSAAKAGIAT  201 (322)
T ss_dssp             HTTCCCCEEEEEECCHHHHHCB-------------------------------------------TTCHHHHHHHHHHHH
T ss_pred             ccCCCCCcEEEEEcCHHHccCC-------------------------------------------CCCccHHHHHHHHHH
Confidence                  3799999999887654                                           566899999999999


Q ss_pred             HHHHHHhhC--CCeEEEEeecceeecCcccCC------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          225 YTRILAKKY--PNFCINCVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       225 ~~~~la~e~--~~i~vn~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+++++.|+  .+|+||+|+|| +.|++....            ...+|||+|+.+++++++.....+|+++..++.
T Consensus       202 l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~~~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  277 (322)
T 3qlj_A          202 LTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG  277 (322)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETT
T ss_pred             HHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhhccccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            999999998  48999999999 999987653            235899999999999998888899999988775

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=1.1e-39  Score=287.77  Aligned_cols=229  Identities=16%  Similarity=0.119  Sum_probs=197.0

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |.++++|++|||||+  +|||+++|++|+++|++|++++|+.  .++..+++....+ ++.++.||+++.++++++++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFN-PAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGC-CSEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHHHH
Confidence            778999999999988  7899999999999999999999997  4555666655544 4889999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccc-cChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT-QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      .+.++++|+||||||+........            ...+ .+.++|++++++|+.++++++++++|+|+++ .++||++
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~------------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~i  164 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEG------------NFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVAL  164 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSS------------CHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEE
T ss_pred             HHHcCCCCEEEECCccCCCcccCC------------ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEE
Confidence            999999999999999875321111            1112 4889999999999999999999999999866 6899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++...|++||+|+++++++++.|+  .+
T Consensus       165 sS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~~~~~la~e~~~~g  201 (280)
T 3nrc_A          165 TYIGAEKAM-------------------------------------------PSYNTMGVAKASLEATVRYTALALGEDG  201 (280)
T ss_dssp             ECGGGTSCC-------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             eccccccCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHHHHcC
Confidence            999887654                                           567899999999999999999998  48


Q ss_pred             eEEEEeecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          236 FCINCVCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+|+||+|.|++.+...                 ..+|||+|+.+++++++.....+|+.+..++..
T Consensus       202 i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG~  271 (280)
T 3nrc_A          202 IKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAGY  271 (280)
T ss_dssp             CEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTTG
T ss_pred             cEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCCc
Confidence            99999999999999976532                 458999999999999988888999999988764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.4e-39  Score=286.41  Aligned_cols=228  Identities=18%  Similarity=0.215  Sum_probs=193.0

Q ss_pred             CCcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |.++++|++|||||+  +|||+++|++|+++|++|++++|+.+ .++..+++....+ .+.++.+|++|.++++++++++
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~   78 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSV   78 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHH
Confidence            778999999999999  99999999999999999999999976 5556666655433 3788999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+......            ...+.+.+.++|++++++|+.++++++++++|.|++  +++||++|
T Consensus        79 ~~~~g~id~lv~nAg~~~~~~~------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~is  144 (275)
T 2pd4_A           79 KKDLGSLDFIVHSVAFAPKEAL------------EGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLS  144 (275)
T ss_dssp             HHHTSCEEEEEECCCCCCGGGG------------SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEE
T ss_pred             HHHcCCCCEEEECCccCccccC------------CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEe
Confidence            9999999999999998643100            001123488999999999999999999999999974  48999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++++++++.|+  .+|
T Consensus       145 S~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi  181 (275)
T 2pd4_A          145 YLGSTKYM-------------------------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHI  181 (275)
T ss_dssp             CGGGTSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             cchhcCCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCe
Confidence            98876653                                           456889999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+|.|++.+..                 ...+||++|+.+++++++.....+|+++..++.
T Consensus       182 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          182 RVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             EEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            999999999999986532                 135899999999999998777889999887764

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-39  Score=284.62  Aligned_cols=228  Identities=21%  Similarity=0.261  Sum_probs=192.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.....+...+.....+.++.++.+|++|.++++++++++.+++
T Consensus         4 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            4 GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF   83 (264)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            45689999999999999999999999999999998876665554444443334579999999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           83 GKLDILVNNAGITG--ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        83 ~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++|+||||||+..  ..+.                .+.+.++|++++++|+.+++++++.++|+|++++.++||++||.
T Consensus        84 g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~  147 (264)
T 3i4f_A           84 GKIDFLINNAGPYVFERKKL----------------VDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQ  147 (264)
T ss_dssp             SCCCEEECCCCCCCCSCCCG----------------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CCCCEEEECCcccccCCCcc----------------ccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeec
Confidence            99999999999532  2222                23488999999999999999999999999998888999999998


Q ss_pred             CCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ... ...                                          .++...|++||+|+++++++++.|+  .+|+
T Consensus       148 ~~~~~~~------------------------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  185 (264)
T 3i4f_A          148 GADSAPG------------------------------------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGIT  185 (264)
T ss_dssp             TGGGCCC------------------------------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhcccCC------------------------------------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            432 211                                          0456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||++.|++.+..               ...+|||+|+.+++++++.....+|+.+..++.-
T Consensus       186 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG~  251 (264)
T 3i4f_A          186 ANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDMITGTIIEVTGAV  251 (264)
T ss_dssp             EEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCSC
T ss_pred             EEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCce
Confidence            99999999999997653               1348999999999999988888999999998764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.3e-40  Score=286.15  Aligned_cols=219  Identities=26%  Similarity=0.307  Sum_probs=188.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+..+..+          .++.++.+|++|+++++++++++.+
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----------~~~~~~~~Dv~d~~~v~~~~~~~~~   92 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----------PDIHTVAGDISKPETADRIVREGIE   92 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----------TTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------CceEEEEccCCCHHHHHHHHHHHHH
Confidence            557889999999999999999999999999999999998765322          2589999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.++||++||.
T Consensus        93 ~~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~  156 (260)
T 3un1_A           93 RFGRIDSLVNNAGVFLAKPFV----------------EMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTS  156 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCT
T ss_pred             HCCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEech
Confidence            999999999999987654433                3389999999999999999999999999998888999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+..                                         ..+...|++||+|+++++++++.|+  .+|+|
T Consensus       157 ~~~~~~~-----------------------------------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~v  195 (260)
T 3un1_A          157 LVDQPMV-----------------------------------------GMPSALASLTKGGLNAVTRSLAMEFSRSGVRV  195 (260)
T ss_dssp             TTTSCBT-----------------------------------------TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred             hhccCCC-----------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEE
Confidence            7754320                                         0345789999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++....            ...+|+|+|+.++++  ......+|+.+..++..
T Consensus       196 n~v~PG~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~itG~~i~vdGG~  255 (260)
T 3un1_A          196 NAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITGEILHVDGGQ  255 (260)
T ss_dssp             EEEEECCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCCSCEEEESTTG
T ss_pred             EEEeecCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCCCcEEEECCCe
Confidence            9999999999986542            234899999999999  34557899999888754

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=1.9e-39  Score=285.35  Aligned_cols=225  Identities=19%  Similarity=0.216  Sum_probs=189.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCH----HHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADP----AAIHSVADF   77 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~----~~v~~~~~~   77 (290)
                      +|++|++|||||++|||+++|++|+++|++|++++| +++++++..+++....+.++.++.+|++|.    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            478999999999999999999999999999999999 888788777777665345689999999999    999999999


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccCh-----------HHHHHhhhcccchHHHHHHHhchhh
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY-----------ESAEKCLQTNYLGAKRMCEALIPLL  146 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~vNv~~~~~l~~~~~~~l  146 (290)
                      +.+.++++|+||||||+....+..+.                +.           ++|++++++|+.++++++++++|+|
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~  151 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYPTPLLPG----------------DDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQ  151 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSCC---------------------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccc----------------CcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            99999999999999998754433222                44           8999999999999999999999999


Q ss_pred             ccCCC------CeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHH
Q 039097          147 QLSDS------ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKA  220 (290)
Q Consensus       147 ~~~~~------~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKa  220 (290)
                      + ++.      ++||++||..+..+.                                           ++...|++||+
T Consensus       152 ~-~~~~~~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~Y~asK~  187 (276)
T 1mxh_A          152 G-EGGAWRSRNLSVVNLCDAMTDLPL-------------------------------------------PGFCVYTMAKH  187 (276)
T ss_dssp             --------CCCEEEEEECCGGGGSCC-------------------------------------------TTCHHHHHHHH
T ss_pred             h-cCCCCCCCCcEEEEECchhhcCCC-------------------------------------------CCCeehHHHHH
Confidence            8 555      899999999887654                                           55689999999


Q ss_pred             HHHHHHHHHHhhC--CCeEEEEeecceeecCcccC-----------C---C-CCChhhhccchhhhhhccCCCCceeEee
Q 039097          221 AMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYN-----------A---G-RLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       221 a~~~~~~~la~e~--~~i~vn~v~PG~v~T~~~~~-----------~---~-~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      ++++++++++.|+  .+|+||+|+||++.|+ ...           .   . ..+|+|+|+.++++++......+|+++.
T Consensus       188 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~  266 (276)
T 1mxh_A          188 ALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLK  266 (276)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEE
Confidence            9999999999998  3899999999999998 211           1   1 4589999999999999877788999998


Q ss_pred             cCccc
Q 039097          284 RKEET  288 (290)
Q Consensus       284 ~~~~~  288 (290)
                      .++..
T Consensus       267 vdgG~  271 (276)
T 1mxh_A          267 VDGGL  271 (276)
T ss_dssp             ESTTG
T ss_pred             ECCch
Confidence            88753

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=6.3e-40  Score=287.51  Aligned_cols=214  Identities=23%  Similarity=0.302  Sum_probs=185.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++.       ....+.++.+|++|.++++++++++.+.+
T Consensus        13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (266)
T 3p19_A           13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------NLPNTLCAQVDVTDKYTFDTAITRAEKIY   85 (266)
T ss_dssp             --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------hcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence            36789999999999999999999999999999999996554321       22368899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.|+++++++++|.|++++.|+||++||..+
T Consensus        86 g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~  149 (266)
T 3p19_A           86 GPADAIVNNAGMMLLGQIDT----------------QEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAG  149 (266)
T ss_dssp             CSEEEEEECCCCCCCCCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG
T ss_pred             CCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh
Confidence            99999999999876544433                38999999999999999999999999999888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++++++++.|+  .+|+||+
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~  186 (266)
T 3p19_A          150 KKTF-------------------------------------------PDHAAYCGTKFAVHAISENVREEVAASNVRVMT  186 (266)
T ss_dssp             TSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            7654                                           567899999999999999999998  4899999


Q ss_pred             eecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEe
Q 039097          241 VCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFF  282 (290)
Q Consensus       241 v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~  282 (290)
                      |+||+|+|++.....                 ..+|||+|+.+++++..+.....+.+.
T Consensus       187 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~~i~  245 (266)
T 3p19_A          187 IAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIREIA  245 (266)
T ss_dssp             EEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEEEEE
T ss_pred             EeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccceeeE
Confidence            999999999876531                 358999999999999988865555543

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-39  Score=283.19  Aligned_cols=222  Identities=26%  Similarity=0.275  Sum_probs=194.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++.++.+|++|.++++++++++.+.
T Consensus         2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999988777766665    346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++ ++||++||..
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~  140 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMET----------------GRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVS  140 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGG
T ss_pred             cCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchh
Confidence            999999999999875443332                38899999999999999999999999998877 9999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C--CeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P--NFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~--~i~  237 (290)
                      +..+.                                           ++...|++||+++++++++++.|+  .  +|+
T Consensus       141 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~  177 (253)
T 1hxh_A          141 SWLPI-------------------------------------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIR  177 (253)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             hcCCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeE
Confidence            87653                                           456899999999999999999998  3  899


Q ss_pred             EEEeecceeecCcccC----------------C-C---CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYN----------------A-G---RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~----------------~-~---~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||++.|++...                . +   ..+|+|+|+.+++++++.....+|+.+..++.
T Consensus       178 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             EEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             EEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            9999999999987432                0 1   23799999999999998888899999988875

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=8.9e-40  Score=284.80  Aligned_cols=222  Identities=22%  Similarity=0.201  Sum_probs=181.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.   .+++    +.++.++.+|++|.++++++++.+.+ 
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV---VADL----GDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH---HHHT----CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH---HHhc----CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            468899999999999999999999999999999999965432   2222    34689999999999999999998877 


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc--------CCCCe
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL--------SDSAR  153 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~--------~~~~~  153 (290)
                      ++++|+||||||+....+.            .....+.+.++|++++++|+.++++++++++|+|++        +..|+
T Consensus        77 ~g~id~lv~nAg~~~~~~~------------~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~  144 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRV------------LSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGV  144 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHH------------HHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEE
T ss_pred             hCCCCEEEECCCCCCCccc------------ccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcE
Confidence            8999999999997632111            011112488999999999999999999999999987        56789


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                           ++...|++||+|+++|+++++.|+
T Consensus       145 iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~  181 (257)
T 3tl3_A          145 IINTASVAAFDGQ-------------------------------------------IGQAAYSASKGGVVGMTLPIARDL  181 (257)
T ss_dssp             EEEECCCC--CCH-------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEcchhhcCCC-------------------------------------------CCCccHHHHHHHHHHHHHHHHHHh
Confidence            9999999887654                                           456899999999999999999999


Q ss_pred             --CCeEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          234 --PNFCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                        .+|+||+|+||+|+|++.+..                ...+|||+|+.+++++++  ...+|+.+..++..
T Consensus       182 ~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~--~~itG~~i~vdGG~  252 (257)
T 3tl3_A          182 ASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEYGALAVHIIEN--PMLNGEVIRLDGAI  252 (257)
T ss_dssp             GGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             cccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC--CCCCCCEEEECCCc
Confidence              489999999999999987642                235899999999999986  57999999998864

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.1e-39  Score=283.97  Aligned_cols=227  Identities=25%  Similarity=0.287  Sum_probs=195.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++. .|+....++..+++...+ .++.++.+|++|.++++++++++.
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG-GNGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHH
Confidence            356889999999999999999999999999999765 567777777777776654 468999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc-cCCCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ-LSDSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~-~~~~~~iV~is  158 (290)
                      ++++++|+||||||+....+..                +.+.++|++++++|+.+++++++.+++.|. ++..++||++|
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~is  163 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARDAAFP----------------ALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLS  163 (267)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             HHhCCccEEEECCCCCCCCccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEc
Confidence            9999999999999987544332                238999999999999999999999998886 56678999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++++++++.|+  .+|
T Consensus       164 S~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi  200 (267)
T 4iiu_A          164 SVSGVMGN-------------------------------------------RGQVNYSAAKAGIIGATKALAIELAKRKI  200 (267)
T ss_dssp             CHHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             chHhccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCe
Confidence            98877654                                           567899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+++|++....              ...+|||+|+.+++++++.....+|+.+..++.
T Consensus       201 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          201 TVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             EEEEEEECSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEEEeeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            999999999999997642              235899999999999998888999999998875

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.9e-39  Score=283.80  Aligned_cols=227  Identities=19%  Similarity=0.253  Sum_probs=190.8

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+.. .++..+++....+. +.++.+|++|.++++++++++.+
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGS-DLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCC-eEEEEcCCCCHHHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999975 55566666554333 78899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||+......            .....+.+.++|++++++|+.++++++++++|.|+++ +++||++||.
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~------------~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~  162 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEF------------KGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYY  162 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGG------------SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECG
T ss_pred             HcCCCCEEEECCCCCCcccC------------CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccc
Confidence            99999999999998643100            0011234889999999999999999999999999864 5899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++++++++.|+  .+|+|
T Consensus       163 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  199 (285)
T 2p91_A          163 GAEKVV-------------------------------------------PHYNVMGIAKAALESTVRYLAYDIAKHGHRI  199 (285)
T ss_dssp             GGTSBC-------------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             hhccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence            876543                                           456789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++.+..                 ...+||++|+.++++++......+|+++..++.
T Consensus       200 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          200 NAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             EEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            9999999999986532                 135899999999999988777889998887765

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-39  Score=280.10  Aligned_cols=228  Identities=19%  Similarity=0.194  Sum_probs=190.1

Q ss_pred             CcCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ..+++|++|||||+  +|||+++|++|+++|++|++++|+.. ..+..+++....+ .+.++.||++|.++++++++++.
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~   87 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLK   87 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999  99999999999999999999999954 4445555554443 38899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccc-cChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT-QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      ++++++|+||||||+.......            ....+ .+.++|++++++|+.+++++++.++|+|++  .++||++|
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~is  153 (271)
T 3ek2_A           88 THWDSLDGLVHSIGFAPREAIA------------GDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLS  153 (271)
T ss_dssp             HHCSCEEEEEECCCCCCGGGGS------------SCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEE
T ss_pred             HHcCCCCEEEECCccCcccccc------------CccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEe
Confidence            9999999999999987531100            01112 489999999999999999999999999984  58999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++|+++++.|+  .+|
T Consensus       154 S~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi  190 (271)
T 3ek2_A          154 YLGAERAI-------------------------------------------PNYNTMGLAKAALEASVRYLAVSLGAKGV  190 (271)
T ss_dssp             CGGGTSBC-------------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccccccCC-------------------------------------------CCccchhHHHHHHHHHHHHHHHHHHhcCc
Confidence            99887654                                           566899999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +||+|+||+|.|++.+..                 ...+||++|+.+++++++.....+|+.+..++..
T Consensus       191 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~  259 (271)
T 3ek2_A          191 RVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGF  259 (271)
T ss_dssp             EEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTG
T ss_pred             EEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCe
Confidence            999999999999997653                 2358999999999999988888999999988764

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.3e-39  Score=288.80  Aligned_cols=214  Identities=23%  Similarity=0.272  Sum_probs=189.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus        26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG-FDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHH
Confidence            446889999999999999999999999999999999999999888888887654 4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      .++++|+||||||+....+..+                .+.++|++++++|+.|+++++++++|.|++++ .++||++||
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS  168 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQ----------------MNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS  168 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred             hCCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence            9999999999999875544333                38999999999999999999999999998766 689999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++|+.|+  .+|+
T Consensus       169 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  205 (301)
T 3tjr_A          169 FAGLVPN-------------------------------------------AGLGTYGVAKYGVVGLAETLAREVKPNGIG  205 (301)
T ss_dssp             GGGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence            9887754                                           567899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC-------------------------CCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||+|+||+|+|++....                         ...+||++|+.++..+...+
T Consensus       206 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          206 VSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             EEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHTC
T ss_pred             EEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence            99999999999986531                         13589999999999887665

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-39  Score=284.68  Aligned_cols=231  Identities=27%  Similarity=0.289  Sum_probs=189.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc--CCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS--GFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...  .+.++.++.+|++|.++++++++++
T Consensus         1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   80 (278)
T 1spx_A            1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   80 (278)
T ss_dssp             -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence            77899999999999999999999999999999999999988888777776321  2346889999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .++++++|+||||||+....+..+.            ....+.++|++++++|+.++++++++++|.|++++ ++||++|
T Consensus        81 ~~~~g~id~lv~~Ag~~~~~~~~~~------------~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~is  147 (278)
T 1spx_A           81 LGKFGKLDILVNNAGAAIPDSQSKT------------GTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNIS  147 (278)
T ss_dssp             HHHHSCCCEEEECCC-------------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC
T ss_pred             HHHcCCCCEEEECCCCCCCcccccc------------cccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEe
Confidence            9999999999999998643322110            01127899999999999999999999999998765 9999999


Q ss_pred             CCCC-cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          159 SSLG-KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       159 S~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      |..+ ..+.                                           ++...|++||++++.++++++.|+  .+
T Consensus       148 S~~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~g  184 (278)
T 1spx_A          148 SIASGLHAT-------------------------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHG  184 (278)
T ss_dssp             CTTSSSSCC-------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             cccccccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9987 5543                                           456889999999999999999998  48


Q ss_pred             eEEEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhccCCC-CceeEeecCcc
Q 039097          236 FCINCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLHKGG-PSGLFFSRKEE  287 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~~~~-~~g~~~~~~~~  287 (290)
                      |+||+|+||++.|++....                        ...+|+|+|+.++++++.+... .+|+.+..++.
T Consensus       185 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG  261 (278)
T 1spx_A          185 IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG  261 (278)
T ss_dssp             CEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             cEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCC
Confidence            9999999999999985321                        1348999999999999876655 88999988765

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=5.4e-39  Score=283.32  Aligned_cols=228  Identities=18%  Similarity=0.208  Sum_probs=194.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|+++.++++++++++ +
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~-~   99 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL----GNRAEFVSTNVTSEDSVLAAIEAA-N   99 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHH-T
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHH-H
Confidence            45788999999999999999999999999999999999988888777776    346899999999999999999999 8


Q ss_pred             hcCCccEEEEc-cccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc------CCCCe
Q 039097           81 HFGKLDILVNN-AGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL------SDSAR  153 (290)
Q Consensus        81 ~~~~id~li~~-Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~------~~~~~  153 (290)
                      +++++|++||| ||+.........           ...+.+.++|++++++|+.+++++++.++|.|++      +..++
T Consensus       100 ~~~~id~lv~~aag~~~~~~~~~~-----------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~  168 (281)
T 3ppi_A          100 QLGRLRYAVVAHGGFGVAQRIVQR-----------DGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGA  168 (281)
T ss_dssp             TSSEEEEEEECCCCCCCCCCSBCT-----------TSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEE
T ss_pred             HhCCCCeEEEccCccccccccccc-----------ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeE
Confidence            88999999999 554433222110           0113488999999999999999999999999976      45689


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                           ++...|++||+|+++++++|+.|+
T Consensus       169 iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~  205 (281)
T 3ppi_A          169 LVLTASIAGYEGQ-------------------------------------------IGQTAYAAAKAGVIGLTIAAARDL  205 (281)
T ss_dssp             EEEECCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecccccCCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHH
Confidence            9999999887754                                           567899999999999999999999


Q ss_pred             --CCeEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcccc
Q 039097          234 --PNFCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL  289 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~  289 (290)
                        .+|+||+|+||+|.|++.+..                ...+|||+|+.+++++.+  ...+|+.+..++...
T Consensus       206 ~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~--~~~tG~~i~vdGG~~  277 (281)
T 3ppi_A          206 SSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN--GYINGEVMRLDGAQR  277 (281)
T ss_dssp             GGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTTCC
T ss_pred             hhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC--CCcCCcEEEECCCcc
Confidence              489999999999999986652                235899999999999985  468999999888643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=4.5e-39  Score=281.55  Aligned_cols=226  Identities=19%  Similarity=0.175  Sum_probs=190.6

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|++ +.++..+++....+. ..++.+|++|.++++++++++.+
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGS-DIVLQCDVAEDASIDTMFAELGK   83 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTC-CCEEECCTTCHHHHHHHHHHHHT
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCC-cEEEEccCCCHHHHHHHHHHHHH
Confidence            4889999999999  9999999999999999999999987 555666666554333 47889999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccc-cChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT-QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++++|+||||||+......            .....+ .+.++|++++++|+.++++++++++|+|++  +|+||++||
T Consensus        84 ~~g~iD~lv~~Ag~~~~~~~------------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS  149 (265)
T 1qsg_A           84 VWPKFDGFVHSIGFAPGDQL------------DGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSY  149 (265)
T ss_dssp             TCSSEEEEEECCCCCCGGGG------------SSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEEC
T ss_pred             HcCCCCEEEECCCCCCcccc------------CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcc
Confidence            99999999999998642100            001112 388999999999999999999999999974  489999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+++++++++++.|+  .+|+
T Consensus       150 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~  186 (265)
T 1qsg_A          150 LGAERAI-------------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVR  186 (265)
T ss_dssp             GGGTSBC-------------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEE
T ss_pred             hhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            8876643                                           456789999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||++.|++.+..                 ...+|||+|+.+++++++.....+|+.+..++.
T Consensus       187 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          187 VNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             EEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence            99999999999986532                 135899999999999988777889999888775

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=3.9e-39  Score=280.46  Aligned_cols=223  Identities=25%  Similarity=0.347  Sum_probs=192.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.+  ++..+++... +.++.++.+|++|.++++++++++.+++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH-GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT-SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999876  4455566543 3468889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||..+
T Consensus        78 g~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  141 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVE----------------QFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHG  141 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchh
Confidence            9999999999986443322                238899999999999999999999999999887899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       142 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  178 (255)
T 2q2v_A          142 LVGS-------------------------------------------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA  178 (255)
T ss_dssp             TSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred             ccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            7653                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccC-----------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYN-----------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~-----------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||++.|++...                       .   ...+|+|+|+.++++++......+|+.+..++.
T Consensus       179 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          179 ICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             EEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            9999999987321                       0   124899999999999998777889999988775

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.5e-39  Score=282.82  Aligned_cols=223  Identities=26%  Similarity=0.304  Sum_probs=192.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|++++.++..+++.    .++.++.+|++|.++++++++++.++
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT----TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877666555442    25788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~  160 (290)
                      ++++|+||||||+....+..                +.+.++|++.+++|+.++++++++++|+|++++ .++||++||.
T Consensus        84 ~g~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  147 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMRPAV----------------DITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASL  147 (263)
T ss_dssp             HTCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG
T ss_pred             cCCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccc
Confidence            99999999999986543322                238899999999999999999999999998776 6899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||++++.++++++.|+  .+|+|
T Consensus       148 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  184 (263)
T 3ak4_A          148 AAKVGA-------------------------------------------PLLAHYSASKFAVFGWTQALAREMAPKNIRV  184 (263)
T ss_dssp             GGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             ccccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEE
Confidence            876543                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecCcccC--------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYN--------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~--------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++...                          ....+|+|+|+.++++++......+|+.+..++.
T Consensus       185 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          185 NCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             EEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             EEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            999999999987421                          0135899999999999998777899999988875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.9e-39  Score=282.38  Aligned_cols=216  Identities=26%  Similarity=0.319  Sum_probs=183.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|++++++            .+.++.+|++|.++++++++++.++
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE------------GFLAVKCDITDTEQVEQAYKEIEET   84 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc------------cceEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999876533            2678999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.++||++||..
T Consensus        85 ~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~  148 (253)
T 2nm0_A           85 HGPVEVLIANAGVTKDQLLM----------------RMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVV  148 (253)
T ss_dssp             TCSCSEEEEECSCCTTTC-------------------CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCC
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchh
Confidence            99999999999986543332                23789999999999999999999999999887779999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       149 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn  185 (253)
T 2nm0_A          149 GLLGS-------------------------------------------AGQANYAASKAGLVGFARSLARELGSRNITFN  185 (253)
T ss_dssp             CCCCH-------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEE
T ss_pred             hCCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            87643                                           345789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++....               ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       186 ~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG~  249 (253)
T 2nm0_A          186 VVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL  249 (253)
T ss_dssp             EEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCcc
Confidence            999999999986531               1358999999999999988888999999988764

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=6.9e-39  Score=278.28  Aligned_cols=226  Identities=24%  Similarity=0.343  Sum_probs=196.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ..+++|++|||||++|||+++|++|+++|++|+++ .|+.++.++..+++...+ .++.++.+|+++.++++++++++.+
T Consensus         3 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            3 SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-CceEEEecCcCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999886 677777777777776554 4688999999999999999999988


Q ss_pred             hcC------CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           81 HFG------KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        81 ~~~------~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      .++      ++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|+|+  +.++|
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~i  143 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIE----------------ETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRI  143 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEE
T ss_pred             HhcccccCCcccEEEECCCCCCCCChh----------------hCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEE
Confidence            764      499999999986544332                238899999999999999999999999995  35799


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+.                                           ++...|++||+|+++++++++.|+ 
T Consensus       144 v~isS~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~  180 (255)
T 3icc_A          144 INISSAATRISL-------------------------------------------PDFIAYSMTKGAINTMTFTLAKQLG  180 (255)
T ss_dssp             EEECCGGGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEeCChhhccCC-------------------------------------------CCcchhHHhHHHHHHHHHHHHHHHH
Confidence            999999887654                                           567899999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCcccc
Q 039097          234 -PNFCINCVCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL  289 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~  289 (290)
                       .+|+||+|+||++.|++.+...                 ..+|||+|+.++++++......+|+.+..++...
T Consensus       181 ~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          181 ARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             GGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred             hcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCCee
Confidence             4899999999999999976531                 3489999999999999888899999999988653

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=6.2e-39  Score=280.82  Aligned_cols=217  Identities=25%  Similarity=0.343  Sum_probs=189.9

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|++++            +.++.++.+|++|.++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------~~~~~~~~~Dl~~~~~v~~~~~~~~~   70 (264)
T 2dtx_A            3 FSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------EAKYDHIECDVTNPDQVKASIDHIFK   70 (264)
T ss_dssp             CGGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            346889999999999999999999999999999999998765            23578899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||.
T Consensus        71 ~~g~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  134 (264)
T 2dtx_A           71 EYGSISVLVNNAGIESYGKIE----------------SMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSV  134 (264)
T ss_dssp             HHSCCCEEEECCCCCCCBCTT----------------TSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCG
T ss_pred             HcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCc
Confidence            999999999999987544333                2388999999999999999999999999998878999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCIN  239 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn  239 (290)
                      .+..+.                                           ++...|++||++++.++++++.|+ +.|+||
T Consensus       135 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn  171 (264)
T 2dtx_A          135 QASIIT-------------------------------------------KNASAYVTSKHAVIGLTKSIALDYAPLLRCN  171 (264)
T ss_dssp             GGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred             hhccCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence            876643                                           456899999999999999999998 349999


Q ss_pred             EeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....                          ...+|+|+|+.++++++......+|+.+..++..
T Consensus       172 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (264)
T 2dtx_A          172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGL  246 (264)
T ss_dssp             EEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence            999999999874311                          1358999999999999987788999999888753

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=4.8e-39  Score=282.80  Aligned_cols=223  Identities=24%  Similarity=0.277  Sum_probs=185.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+|+ |++|||||++|||+++|++|+++|++|++++|+.+++++..+++...  .++.++.+|++|.++++++++++.+.
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK--TRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3566 99999999999999999999999999999999988887777776543  36889999999999999999999999


Q ss_pred             cCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC-eEEEEcC
Q 039097           82 FGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA-RIVNVSS  159 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~-~iV~isS  159 (290)
                      ++++|+||||||+... .+..                +.+.++|++++++|+.+++++++.++|.|++++.| +||++||
T Consensus        95 ~g~iD~lvnnAG~~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS  158 (272)
T 2nwq_A           95 FATLRGLINNAGLALGTDPAQ----------------SCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS  158 (272)
T ss_dssp             GSSCCEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             hCCCCEEEECCCCCCCCCCcc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            9999999999998642 2222                33889999999999999999999999999877778 9999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+++++++++++.|+  .+|+
T Consensus       159 ~~~~~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~el~~~gIr  195 (272)
T 2nwq_A          159 VAGKWPY-------------------------------------------PGSHVYGGTKAFVEQFSLNLRCDLQGTGVR  195 (272)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHTTCTTSCCE
T ss_pred             chhccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhCccCeE
Confidence            9887653                                           456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccC---------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYN---------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~---------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||++.|++...               ..+.+|||+|+.++++++.+ ...+|+.+..++.
T Consensus       196 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~~-~~~~g~~i~v~~~  259 (272)
T 2nwq_A          196 VTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQP-AHLNINSLEIMPV  259 (272)
T ss_dssp             EEEEEECSBC--------------------CCCCBCHHHHHHHHHHHHTSC-TTEEEEEEEEEET
T ss_pred             EEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHHhCCC-ccCccceEEEeec
Confidence            9999999999998532               12468999999999999864 4677877765543

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.9e-39  Score=280.61  Aligned_cols=224  Identities=21%  Similarity=0.163  Sum_probs=190.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh-
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH-   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   81 (290)
                      +|++|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+ .++.++.+|++|.++++++++++.++ 
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            5789999999999999999999999999999999999888887777776543 46889999999999999999999886 


Q ss_pred             cCCccEEEEccc--cC-----CCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           82 FGKLDILVNNAG--IT-----GISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        82 ~~~id~li~~Ag--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      ++++|+||||||  +.     ...+.                .+.+.++|++++++|+.+++++++.++|.|++++.++|
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~----------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~i  144 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAF----------------WETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLI  144 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCT----------------TTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEE
T ss_pred             CCCceEEEECCccccccccccCCCcc----------------ccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEE
Confidence            899999999995  32     11121                23478999999999999999999999999988778999


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+                                            .+...|++||+|+++++++++.|+ 
T Consensus       145 v~isS~~~~~~--------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~  180 (260)
T 2qq5_A          145 VVISSPGSLQY--------------------------------------------MFNVPYGVGKAACDKLAADCAHELR  180 (260)
T ss_dssp             EEECCGGGTSC--------------------------------------------CSSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEEcChhhcCC--------------------------------------------CCCCchHHHHHHHHHHHHHHHHHhc
Confidence            99999877543                                            234789999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccCC----------------C----CCChhhhccchhhhhhccC-CCCceeEeecCcc
Q 039097          234 -PNFCINCVCPGYVKTEMTYNA----------------G----RLTVEEGAESPVWLALLHK-GGPSGLFFSRKEE  287 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~~----------------~----~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~~~  287 (290)
                       .+|+||+|+||++.|+|....                .    ..+||++|+.+++++++.. ...+|+++..++.
T Consensus       181 ~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~~~~~itG~~i~~~~~  256 (260)
T 2qq5_A          181 RHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPNILSLSGKVLPSCDL  256 (260)
T ss_dssp             GGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCTTGGGGTTCEEEHHHH
T ss_pred             cCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCcccccccceeechhhh
Confidence             489999999999999985431                0    1268999999999999876 3789999987764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.1e-38  Score=286.61  Aligned_cols=215  Identities=23%  Similarity=0.312  Sum_probs=184.7

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||+||||+++|++|+++|++|++++|+.+++++..+++...+. .++.++.+|+++.++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5678999999999999999999999999999999999999998888888876553 278999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------CCCe
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSAR  153 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~~~~  153 (290)
                      +.++++|+||||||+....+..+                .+.++|++++++|+.|++++++.++|.|+++      ..|+
T Consensus        83 ~~~g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~  146 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQPIEE----------------SSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGH  146 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCE
T ss_pred             HhCCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcE
Confidence            99999999999999875544333                3889999999999999999999999999764      5789


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                           ++...|++||+|+++|+++++.|+
T Consensus       147 iV~isS~a~~~~~-------------------------------------------~~~~~Y~aSKaal~~~~~~la~e~  183 (319)
T 3ioy_A          147 VVNTASMAAFLAA-------------------------------------------GSPGIYNTTKFAVRGLSESLHYSL  183 (319)
T ss_dssp             EEEECCGGGTCCC-------------------------------------------SSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecccccccCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999987764                                           566899999999999999999998


Q ss_pred             --CCeEEEEeecceeecCcccCCC---------------------------CCChhhhccchhhhhhccC
Q 039097          234 --PNFCINCVCPGYVKTEMTYNAG---------------------------RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~~---------------------------~~~~e~~a~~~~~l~~~~~  274 (290)
                        .+|+|++|+||+|.|++.....                           ..+|+++|+.++..+..++
T Consensus       184 ~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~al~~~~  253 (319)
T 3ioy_A          184 LKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIEAMKANR  253 (319)
T ss_dssp             GGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred             hhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHHHHHcCC
Confidence              4899999999999999865421                           1689999999998877655

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=5.6e-39  Score=281.65  Aligned_cols=227  Identities=17%  Similarity=0.161  Sum_probs=187.8

Q ss_pred             CCcCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCcccH-HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGG-LEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |.++++|++|||||  ++|||+++|++|+++|++|++++|+.++. ++..    ...+.++.++.+|++|.+++++++++
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT----DRLPAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH----TTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHH----HhcCCCceEEEccCCCHHHHHHHHHH
Confidence            45699999999999  99999999999999999999999987552 3322    22234678899999999999999999


Q ss_pred             HHhhcC---CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           78 IRSHFG---KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        78 ~~~~~~---~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                      +.++++   ++|+||||||+......           ......+.+.++|++++++|+.++++++++++|+|++  .|+|
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~-----------~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~i  144 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGM-----------GINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSI  144 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGS-----------TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEE
T ss_pred             HHHHhCCCCCceEEEECCccCccccc-----------cccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeE
Confidence            999999   99999999998642100           0011123488999999999999999999999999975  3799


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+ .+.                                           +....|++||+++++++++++.|+ 
T Consensus       145 v~iss~~~-~~~-------------------------------------------~~~~~Y~asKaa~~~l~~~la~e~~  180 (269)
T 2h7i_A          145 VGMDFDPS-RAM-------------------------------------------PAYNWMTVAKSALESVNRFVAREAG  180 (269)
T ss_dssp             EEEECCCS-SCC-------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCccc-ccc-------------------------------------------CchHHHHHHHHHHHHHHHHHHHHhc
Confidence            99999765 222                                           456889999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccC--------------------------C--CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          234 -PNFCINCVCPGYVKTEMTYN--------------------------A--GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~--------------------------~--~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                       .+|+||+|+||+++|++.+.                          .  ...+|||+|+.+++++++.....+|+.+..
T Consensus       181 ~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~v  260 (269)
T 2h7i_A          181 KYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYA  260 (269)
T ss_dssp             TTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEE
T ss_pred             ccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEe
Confidence             48999999999999996321                          1  135899999999999998888899999999


Q ss_pred             Cccc
Q 039097          285 KEET  288 (290)
Q Consensus       285 ~~~~  288 (290)
                      ++..
T Consensus       261 dGG~  264 (269)
T 2h7i_A          261 DGGA  264 (269)
T ss_dssp             STTG
T ss_pred             cCCe
Confidence            8763

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=2.1e-38  Score=275.09  Aligned_cols=217  Identities=22%  Similarity=0.207  Sum_probs=183.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.+.        .. .  .+.++.+|++|.++++++++++.++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~-~--~~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQ-Y--PFATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SC-C--SSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hc-C--CceEEEcCCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998752        11 1  2778899999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.++||++||..
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~  135 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQ----------------LSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDA  135 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             cCCCCEEEECCCcCCCCCccc----------------CCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchh
Confidence            999999999999875443332                3889999999999999999999999999887789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       136 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  172 (250)
T 2fwm_X          136 AHTPR-------------------------------------------IGMSAYGASKAALKSLALSVGLELAGSGVRCN  172 (250)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hCCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEE
Confidence            87653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC----------------------C---CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA----------------------G---RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------------~---~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....                      +   ..+|||+|+.+++++++.....+|+.+..++..
T Consensus       173 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~  246 (250)
T 2fwm_X          173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGGS  246 (250)
T ss_dssp             EEEECCC------------------------------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence            999999999974321                      1   247899999999999988888999999988763

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.8e-38  Score=277.28  Aligned_cols=222  Identities=19%  Similarity=0.235  Sum_probs=190.4

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|+++ .++..+++....+. +.++.+|++|.++++++++++.+
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGG-ALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTC-CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCC-cEEEECCCCCHHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999975 55555666544333 78899999999999999999999


Q ss_pred             hcCCccEEEEccccCCC----CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           81 HFGKLDILVNNAGITGI----SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      .++++|+||||||+...    .+.                .+.+.++|++++++|+.++++++++++|.|++  +|+||+
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~----------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~  144 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRY----------------IDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVT  144 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCG----------------GGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEE
T ss_pred             HcCCCCEEEECCCCCCcccCCCCc----------------ccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEE
Confidence            99999999999998642    121                23488999999999999999999999999974  489999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++...|++||+++++++++++.|+  .
T Consensus       145 isS~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~  181 (261)
T 2wyu_A          145 LTYYASEKVV-------------------------------------------PKYNVMAIAKAALEASVRYLAYELGPK  181 (261)
T ss_dssp             EECGGGTSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             EecccccCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9998876543                                           456789999999999999999998  4


Q ss_pred             CeEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          235 NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|+||++.|++....                 ...+|||+|+.+++++++.....+|+.+..++.
T Consensus       182 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          182 GVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             TCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            89999999999999986432                 135899999999999988777889999888775

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=7.2e-39  Score=277.63  Aligned_cols=216  Identities=28%  Similarity=0.332  Sum_probs=183.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|++++.++            +..+.+|++|.++++++++++.+.
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------------~~~~~~D~~~~~~~~~~~~~~~~~   78 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG------------LFGVEVDVTDSDAVDRAFTAVEEH   78 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------------SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH------------hcCeeccCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998765432            224889999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++++.++||++||..
T Consensus        79 ~g~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  142 (247)
T 1uzm_A           79 QGPVEVLVSNAGLSADAFLM----------------RMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS  142 (247)
T ss_dssp             HSSCSEEEEECSCCC---------------------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             cCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHh
Confidence            99999999999987543332                23889999999999999999999999999988789999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|++.++++++.|+  .+|+||
T Consensus       143 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  179 (247)
T 1uzm_A          143 GLWGI-------------------------------------------GNQANYAASKAGVIGMARSIARELSKANVTAN  179 (247)
T ss_dssp             C------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            87653                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....               ...+|||+|+.++++++......+|+.+..++..
T Consensus       180 ~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG~  243 (247)
T 1uzm_A          180 VVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  243 (247)
T ss_dssp             EEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCCc
Confidence            999999999975421               2358999999999999987788999999988763

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.2e-38  Score=276.42  Aligned_cols=216  Identities=27%  Similarity=0.352  Sum_probs=181.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|++|.++++++++++.++++++|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   76 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG----DNLYIAQLDVRNRAAIEEMLASLPAEWCNID   76 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHTSCTTTCCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CceEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999999999887777666652    3688999999999999999999999999999


Q ss_pred             EEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           87 ILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      +||||||+.. ..+..                +.+.++|++++++|+.+++++++.++|+|++++.++||++||..+..+
T Consensus        77 ~lvnnAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~  140 (248)
T 3asu_A           77 ILVNNAGLALGMEPAH----------------KASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP  140 (248)
T ss_dssp             EEEECCCCCCCCSCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC
T ss_pred             EEEECCCcCCCCCchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC
Confidence            9999999863 22222                338899999999999999999999999998777899999999988765


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|++||+++++++++++.|+  .+|+||+|+|
T Consensus       141 ~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  177 (248)
T 3asu_A          141 Y-------------------------------------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP  177 (248)
T ss_dssp             C-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEE
T ss_pred             C-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            4                                           456899999999999999999998  4899999999


Q ss_pred             ceee-cCcccC---------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          244 GYVK-TEMTYN---------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       244 G~v~-T~~~~~---------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |++. |++...               ..+.+|||+|+.++++++.+ ...+|+.+..++
T Consensus       178 G~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l~s~~-~~~~g~~i~v~~  235 (248)
T 3asu_A          178 GLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLP-AHVNINTLEMMP  235 (248)
T ss_dssp             CSBCC----------------------CCBCHHHHHHHHHHHHHSC-TTCCCCEEEECC
T ss_pred             cccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHHhcCC-ccceeeEEEEcc
Confidence            9999 998531               12468999999999999864 466777665443

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-39  Score=278.58  Aligned_cols=219  Identities=25%  Similarity=0.256  Sum_probs=185.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+++++++.. ++     .++.++.+|++|.++++++    .+
T Consensus         1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-----~~~~~~~~D~~~~~~~~~~----~~   70 (246)
T 2ag5_A            1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-----PGIQTRVLDVTKKKQIDQF----AN   70 (246)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-----TTEEEEECCTTCHHHHHHH----HH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-----cCceEEEeeCCCHHHHHHH----HH
Confidence            78899999999999999999999999999999999999976544332 22     2588999999999998844    44


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+....+..                +.+.++|++.+++|+.++++++++++|+|++++.++||++||.
T Consensus        71 ~~~~id~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~  134 (246)
T 2ag5_A           71 EVERLDVLFNVAGFVHHGTVL----------------DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV  134 (246)
T ss_dssp             HCSCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred             HhCCCCEEEECCccCCCCCcc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEech
Confidence            578999999999987543322                2388999999999999999999999999988778999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                          +++...|++||++++.++++++.|+  .+|+|
T Consensus       135 ~~~~~~------------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  172 (246)
T 2ag5_A          135 ASSVKG------------------------------------------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC  172 (246)
T ss_dssp             BTTTBC------------------------------------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             HhCcCC------------------------------------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            876543                                          1256899999999999999999998  48999


Q ss_pred             EEeecceeecCcccC---------------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYN---------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~---------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++...                     ....+|||+|+.+++++++.....+|+.+..++.
T Consensus       173 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          173 NCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             EEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             EEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            999999999997432                     0134899999999999998888899999998875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.9e-38  Score=278.59  Aligned_cols=225  Identities=26%  Similarity=0.316  Sum_probs=188.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++|++|||||++|||+++|++|+++|++|+++ .|+.+..++..+++...+ .++.++.+|++|.++++++++++.+.+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-GEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            357999999999999999999999999999887 677777777777776543 468999999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC---CCCeEEEEc
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS---DSARIVNVS  158 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~---~~~~iV~is  158 (290)
                      +++|+||||||+... .+..                +.+.++|++++++|+.+++++++.++|.|++.   ..++||++|
T Consensus       103 g~id~li~nAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~is  166 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVD----------------EMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVS  166 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CCCCEEEECCCCCCCCCChh----------------hCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEc
Confidence            999999999998754 2222                33899999999999999999999999999863   468999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                          +++...|++||+|+++++++++.|+  .+|
T Consensus       167 S~~~~~~~------------------------------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi  204 (272)
T 4e3z_A          167 SMAAILGS------------------------------------------ATQYVDYAASKAAIDTFTIGLAREVAAEGI  204 (272)
T ss_dssp             CTHHHHCC------------------------------------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             chHhccCC------------------------------------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCc
Confidence            99876543                                          1355789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+|.|++....                ...+|||+|+.++++++......+|+++..++.
T Consensus       205 ~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          205 RVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             EEEEEEECSBC------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            999999999999986541                124699999999999998888899999998874

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=4.5e-38  Score=277.86  Aligned_cols=225  Identities=23%  Similarity=0.272  Sum_probs=191.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+..+ .++..+++...+ .++.++.+|+++.++++++++++.+.
T Consensus        26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC-CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998754 444455555443 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|+  ..++||++||..
T Consensus       105 ~g~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~  166 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVSFGHVK----------------DVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSIT  166 (283)
T ss_dssp             HSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGG
T ss_pred             cCCCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechh
Confidence            99999999999987543332                338899999999999999999999999993  468999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                          +++...|++||+++++++++++.|+  .+|+||
T Consensus       167 ~~~~~------------------------------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  204 (283)
T 1g0o_A          167 GQAKA------------------------------------------VPKHAVYSGSKGAIETFARCMAIDMADKKITVN  204 (283)
T ss_dssp             GTCSS------------------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hccCC------------------------------------------CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            76543                                          1236889999999999999999998  489999


Q ss_pred             EeecceeecCcccC------------------------C----CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN------------------------A----GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~------------------------~----~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++...                        .    ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       205 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~  281 (283)
T 1g0o_A          205 VVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  281 (283)
T ss_dssp             EEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence            99999999997321                        0    1248999999999999988888999999988764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-38  Score=280.17  Aligned_cols=221  Identities=27%  Similarity=0.375  Sum_probs=189.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||++|||+++|++|+++|++|++++|++++.++..+++.     .+.++.+|++|.++++++++++.++
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877666555542     3788999999999999999999999


Q ss_pred             cCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++++|+||||||+... .+.                .+.+.++|++++++|+.++++++++++|+|+++ .++||++||.
T Consensus        80 ~g~iD~lv~nAg~~~~~~~~----------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~  142 (270)
T 1yde_A           80 FGRLDCVVNNAGHHPPPQRP----------------EETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSL  142 (270)
T ss_dssp             HSCCCEEEECCCCCCCCCCG----------------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCH
T ss_pred             cCCCCEEEECCCCCCCCCCc----------------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCc
Confidence            9999999999998643 222                233889999999999999999999999999765 5899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+++++++++++.|+  .+|+|
T Consensus       143 ~~~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  179 (270)
T 1yde_A          143 VGAIGQ-------------------------------------------AQAVPYVATKGAVTAMTKALALDESPYGVRV  179 (270)
T ss_dssp             HHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             cccCCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence            776543                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecCcccC------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYN------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++...                  .   +..+|+|+|+.+++++++ ....+|+.+..++..
T Consensus       180 n~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~itG~~i~vdGG~  249 (270)
T 1yde_A          180 NCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGA  249 (270)
T ss_dssp             EEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTT
T ss_pred             EEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCcCCCEEEECCCe
Confidence            999999999997421                  0   124899999999999997 578899999888753

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=5.6e-38  Score=269.31  Aligned_cols=219  Identities=27%  Similarity=0.268  Sum_probs=181.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++|++|||||+||||++++++|+++|++|++++|+++++++..+++.     ++.++.+|++|.++++++++++.+.++
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-----GALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----hceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999877666555442     578899999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||.....+..                +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+.
T Consensus        78 ~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  141 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVH----------------ELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGK  141 (234)
T ss_dssp             CCCEEEECCCCCCCSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTT
T ss_pred             CCCEEEECCCcCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhc
Confidence            999999999986443322                2388999999999999999999999999998878999999999876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|+++|++++.++++++.++  .++++|+|
T Consensus       142 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  178 (234)
T 2ehd_A          142 NPF-------------------------------------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNV  178 (234)
T ss_dssp             SCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             CCC-------------------------------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            543                                           456899999999999999999998  48999999


Q ss_pred             ecceeecCcccCCC----CCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          242 CPGYVKTEMTYNAG----RLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       242 ~PG~v~T~~~~~~~----~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +||++.|++....+    +.+|+|+|+.+++++..+....+|++....+
T Consensus       179 ~Pg~v~t~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          179 LPGSVDTGFAGNTPGQAWKLKPEDVAQAVLFALEMPGHAMVSEIELRPT  227 (234)
T ss_dssp             ECC----------------CCHHHHHHHHHHHHHSCCSSCCCEEECCC-
T ss_pred             EeCCCcCCcccccccccCCCCHHHHHHHHHHHhCCCcccccceEEEeec
Confidence            99999999866432    4799999999999999888888888765544

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=4.5e-38  Score=272.36  Aligned_cols=227  Identities=26%  Similarity=0.253  Sum_probs=196.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++|++|||||+||||+++|++|+++|++|++++|+++..++..+++...  .++.++.+|++|.++++++++++.+
T Consensus         1 ~~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   78 (251)
T 1zk4_A            1 SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEK   78 (251)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999999987777766665432  4689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC-CeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~-~~iV~isS  159 (290)
                      .++++|+||||||.....+..                +.+.++|++++++|+.+++++++.++|.|++++. ++||++||
T Consensus        79 ~~~~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS  142 (251)
T 1zk4_A           79 AFGPVSTLVNNAGIAVNKSVE----------------ETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS  142 (251)
T ss_dssp             HHSSCCEEEECCCCCCCCCTT----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECC
T ss_pred             HhCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            999999999999986543332                2388999999999999999999999999988766 89999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CC
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PN  235 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~  235 (290)
                      ..+..+.                                           ++...|++||++++.++++++.|+    .+
T Consensus       143 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~  179 (251)
T 1zk4_A          143 IEGFVGD-------------------------------------------PSLGAYNASKGAVRIMSKSAALDCALKDYD  179 (251)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred             chhccCC-------------------------------------------CCCccchHHHHHHHHHHHHHHHHhcccCCC
Confidence            9876543                                           456899999999999999999886    38


Q ss_pred             eEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          236 FCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|++|+||++.|++....                ...+|+|+|+.+++++.......+|+.+..++..
T Consensus       180 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  248 (251)
T 1zk4_A          180 VRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             EEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             eEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcccccccCcEEEECCCc
Confidence            9999999999999975432                1348999999999999887777899999887753

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=5.3e-38  Score=273.59  Aligned_cols=227  Identities=24%  Similarity=0.315  Sum_probs=195.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||+||||+++|++|+++|++|++++| +.++.++..+++...+ .++.++.+|+++.++++++++++.
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999 7766766666665443 468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~is  158 (290)
                      +.++++|+||||||.....+..                +.+.++|++.+++|+.+++++++.++|.|++++ .++||++|
T Consensus        81 ~~~g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~is  144 (261)
T 1gee_A           81 KEFGKLDVMINNAGLENPVSSH----------------EMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMS  144 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEEC
T ss_pred             HHcCCCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeC
Confidence            9999999999999987543322                238899999999999999999999999998876 78999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||++++.++++++.++  .+|
T Consensus       145 S~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  181 (261)
T 1gee_A          145 SVHEKIPW-------------------------------------------PLFVHYAASKGGMKLMTETLALEYAPKGI  181 (261)
T ss_dssp             CGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred             CHHhcCCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHhcccCe
Confidence            98776543                                           456899999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||++.|++....                 ...+|+++|+.++++++......+|+.+..++.
T Consensus       182 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          182 RVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             EEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            999999999999985421                 135899999999999987777889999888765

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=7e-38  Score=270.18  Aligned_cols=225  Identities=23%  Similarity=0.215  Sum_probs=195.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      ++|++|||||+||||+++|++|+++|+       +|++++|+.++.++..+++... +.++.++.+|+++.+++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE-GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT-TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc-CCeeeEEEecCCCHHHHHHHHHH
Confidence            478999999999999999999999999       9999999988777777776543 34689999999999999999999


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      +.+.++++|+||||||.....+..                +.+.++|++.+++|+.+++++++.++|+|++++.++||++
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~i  143 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALS----------------DLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFI  143 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            999999999999999987543322                2388999999999999999999999999987777999999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++...|++||+++++++++++.++  .+
T Consensus       144 sS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~g  180 (244)
T 2bd0_A          144 TSVAATKAF-------------------------------------------RHSSIYCMSKFGQRGLVETMRLYARKCN  180 (244)
T ss_dssp             CCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             ecchhcCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhhccC
Confidence            999876643                                           456899999999999999999998  48


Q ss_pred             eEEEEeecceeecCcccCC------CCCChhhhccchhhhhhccCCCCceeEeecCcccc
Q 039097          236 FCINCVCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL  289 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~  289 (290)
                      ++|++|+||++.|++....      ...+|+++|+.+++++..+....+|.++..++...
T Consensus       181 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~~~~  240 (244)
T 2bd0_A          181 VRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEIILRPTSGD  240 (244)
T ss_dssp             EEEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSCTTEEEEEEEEEETTCC
T ss_pred             cEEEEEECCCccchhhhhccccccccCCCHHHHHHHHHHHHhCCccccchheEEeccccc
Confidence            9999999999999997653      34689999999999999888888888877666544

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-38  Score=274.36  Aligned_cols=219  Identities=24%  Similarity=0.275  Sum_probs=178.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .++.++.+|+++.+++.+++++    +
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~----~   82 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISK----T   82 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHT----C
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHh----c
Confidence            5789999999999999999999999999999999999888777766653    3688999999999998888765    4


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|+++..++||++||..+
T Consensus        83 ~~id~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~  146 (249)
T 3f9i_A           83 SNLDILVCNAGITSDTLAIR----------------MKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG  146 (249)
T ss_dssp             SCCSEEEECCC-----------------------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC
T ss_pred             CCCCEEEECCCCCCCCcccc----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHh
Confidence            78999999999875443322                37899999999999999999999999998888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++++++++.|+  .+|+||+
T Consensus       147 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  183 (249)
T 3f9i_A          147 IAGN-------------------------------------------PGQANYCASKAGLIGMTKSLSYEVATRGITVNA  183 (249)
T ss_dssp             --CC-------------------------------------------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             ccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence            7654                                           567899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++.+..               ...+|||+|+.++++++......+|+.+..++..
T Consensus       184 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG~  246 (249)
T 3f9i_A          184 VAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM  246 (249)
T ss_dssp             EEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCCE
Confidence            99999999987653               2347999999999999988888999999988753

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=1.3e-37  Score=272.33  Aligned_cols=265  Identities=38%  Similarity=0.608  Sum_probs=210.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLAL-NGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|++|||||+||||+++|++|++ +|++|++++|+.++.++..+++...+ .++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence            5689999999999999999999999 99999999999888888777776543 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccC-hHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT-YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+||||||+.......                 .+ .+++++++++|+.+++++++.++|.|++  .++||++||..
T Consensus        81 g~id~li~~Ag~~~~~~~~-----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~  141 (276)
T 1wma_A           81 GGLDVLVNNAGIAFKVADP-----------------TPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIM  141 (276)
T ss_dssp             SSEEEEEECCCCCCCTTCC-----------------SCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHH
T ss_pred             CCCCEEEECCcccccCCCc-----------------cccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChh
Confidence            9999999999986432211                 13 5889999999999999999999999875  47999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC------CC
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY------PN  235 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~------~~  235 (290)
                      +..+............+...+++.++......+......+.....++|  ...|++||++++.+++.++.++      .+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~  219 (276)
T 1wma_A          142 SVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDK  219 (276)
T ss_dssp             HHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCC--SCHHHHHHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred             hhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCc--cchhHHHHHHHHHHHHHHHHHhhcccCCCc
Confidence            764311000000000111234555566666666555554443333332  2789999999999999999997      38


Q ss_pred             eEEEEeecceeecCcccCCCCCChhhhccchhhhhhccC--CCCceeEeecCccccC
Q 039097          236 FCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHK--GGPSGLFFSRKEETLF  290 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~--~~~~g~~~~~~~~~~~  290 (290)
                      |+||+|+||++.|++.+.....+|+++|+.+++++..+.  ...+|+++..++...|
T Consensus       220 i~v~~v~PG~v~t~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~~~~~~~  276 (276)
T 1wma_A          220 ILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  276 (276)
T ss_dssp             CEEEEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             eEEEEecCCccccCcCCccccCChhHhhhhHhhhhcCcccccccCceEeccCceecC
Confidence            999999999999999887777899999999999998663  4789999998887776

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=5.9e-38  Score=271.00  Aligned_cols=228  Identities=24%  Similarity=0.272  Sum_probs=196.3

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |. ++++|++|||||+||||++++++|+++|++|++++|++++.++..+++....+.++.++.+|++|.++++++++++.
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            44 58899999999999999999999999999999999998887777776654333468999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +.++++|+||||||.....+..                +.+.++|++.+++|+.+++++++.++|.|++++.++||++||
T Consensus        81 ~~~~~~d~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS  144 (248)
T 2pnf_A           81 NLVDGIDILVNNAGITRDKLFL----------------RMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISS  144 (248)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECC
T ss_pred             HhcCCCCEEEECCCCCCCCccc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            9999999999999986543322                238899999999999999999999999998777789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|+++|++++.+++.++.++  .+++
T Consensus       145 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~  181 (248)
T 2pnf_A          145 VVGFTGN-------------------------------------------VGQVNYSTTKAGLIGFTKSLAKELAPRNVL  181 (248)
T ss_dssp             HHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHhcCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            8765543                                           456889999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+|+||++.|++....               ...+|+++|+.+++++.......+|+.+..++.
T Consensus       182 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          182 VNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             EEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            99999999999986532               134799999999999987767788998887764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=5.8e-38  Score=276.60  Aligned_cols=219  Identities=25%  Similarity=0.280  Sum_probs=187.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|++|.++++++++++.+.+
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----PDRAEAISLDVTDGERIDVVAADVLARY   77 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999999999988877665543    3468999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||..+
T Consensus        78 g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~  141 (281)
T 3m1a_A           78 GRVDVLVNNAGRTQVGAFEE----------------TTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGG  141 (281)
T ss_dssp             SCCSEEEECCCCEEECCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCcCCCCChhh----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccc
Confidence            99999999999875444333                38899999999999999999999999999888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       142 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  178 (281)
T 3m1a_A          142 QLSF-------------------------------------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLI  178 (281)
T ss_dssp             TCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence            7654                                           567899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC----------------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          241 VCPGYVKTEMTYNA----------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |+||++.|++....                            ...+|+|+|+.+++++..+.  ..+.++..++
T Consensus       179 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~  250 (281)
T 3m1a_A          179 VEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK--TPLRLALGGD  250 (281)
T ss_dssp             EEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS--CCSEEEESHH
T ss_pred             EecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC--CCeEEecCch
Confidence            99999999985431                            13589999999999988765  4455554433

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.8e-37  Score=270.73  Aligned_cols=227  Identities=22%  Similarity=0.241  Sum_probs=189.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++|.++++++++++.+.
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL----GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999998888776665    246899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------CCCeEE
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSARIV  155 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~~~~iV  155 (290)
                      ++++|+||||||+....+..+.          ....+.+.++|++.+++|+.+++++++.+.|.|+++      +.++||
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~----------~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv  153 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVASKTYNL----------KKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVII  153 (265)
T ss_dssp             HSCCCEEEECCCCCCCCCSEET----------TTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEE
T ss_pred             CCCCCEEEECCccCCCCccccc----------cccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEE
Confidence            9999999999998754332210          000123789999999999999999999999999877      568999


Q ss_pred             EEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--
Q 039097          156 NVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--  233 (290)
Q Consensus       156 ~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--  233 (290)
                      ++||..+..+.                                           ++...|++||++++.++++++.++  
T Consensus       154 ~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~  190 (265)
T 2o23_A          154 NTASVAAFEGQ-------------------------------------------VGQAAYSASKGGIVGMTLPIARDLAP  190 (265)
T ss_dssp             EECCTHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             EeCChhhcCCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHhh
Confidence            99999776543                                           456899999999999999999998  


Q ss_pred             CCeEEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 PNFCINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .+|+||+|+||++.|++.+..                ...+|+++|+.+++++..  ...+|+.+..++.
T Consensus       191 ~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~i~vdgG  258 (265)
T 2o23_A          191 IGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN--PFLNGEVIRLDGA  258 (265)
T ss_dssp             GTEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTT
T ss_pred             cCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhc--CccCceEEEECCC
Confidence            489999999999999986431                134899999999999853  4689998888775

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=8.9e-38  Score=270.36  Aligned_cols=228  Identities=28%  Similarity=0.336  Sum_probs=194.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|++|||||+||||+++|++|+++|++|++++|+.++.++..+++....+.++.++.+|++|.++++++++++.+.+++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            37899999999999999999999999999999999888777776663323346899999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||.....+..             ...+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+..
T Consensus        81 id~li~~Ag~~~~~~~~-------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  147 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAG-------------VLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLV  147 (250)
T ss_dssp             CCEEEECCCCCCCTTCC-------------SGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred             CCEEEECCCCCCCCCcc-------------hhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhcc
Confidence            99999999986433210             01233789999999999999999999999999887779999999998765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|++||++++.++++++.|+  .+++||+|+
T Consensus       148 ~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~  184 (250)
T 2cfc_A          148 AF-------------------------------------------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVC  184 (250)
T ss_dssp             CC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             CC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEE
Confidence            43                                           456899999999999999999998  489999999


Q ss_pred             cceeecCcccC-C----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          243 PGYVKTEMTYN-A----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       243 PG~v~T~~~~~-~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||++.|++... .                ...+|+|+|+.+++++..+....+|+.+..++..
T Consensus       185 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  247 (250)
T 2cfc_A          185 PGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALVMDGAY  247 (250)
T ss_dssp             ECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred             eCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCEEEECCce
Confidence            99999998543 1                1238999999999999887778899999887753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-37  Score=275.48  Aligned_cols=227  Identities=28%  Similarity=0.303  Sum_probs=194.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..+++|++|||||+||||+++|++|+++|++|++++|++++.++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus        40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcC-CceeEEECCCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999888877777776543 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus       119 ~~~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  182 (285)
T 2c07_A          119 HKNVDILVNNAGITRDNLFL----------------RMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIV  182 (285)
T ss_dssp             CSCCCEEEECCCCCCCCCTT----------------TCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             cCCCCEEEECCCCCCCCchh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChh
Confidence            99999999999987544332                23889999999999999999999999999877779999999997


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.|+  .+|+||
T Consensus       183 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  219 (285)
T 2c07_A          183 GLTGN-------------------------------------------VGQANYSSSKAGVIGFTKSLAKELASRNITVN  219 (285)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence            76543                                           456899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....               ...+|+++|+.+++++.......+|+.+..++..
T Consensus       220 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG~  283 (285)
T 2c07_A          220 AIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  283 (285)
T ss_dssp             EEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCCc
Confidence            999999999986542               1358999999999999887778899999887753

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.2e-37  Score=272.17  Aligned_cols=226  Identities=25%  Similarity=0.256  Sum_probs=182.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|+++|++|++++|++++.++..+++...+ .++.++.+|+++.++++++++++.+.
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKG-FQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888887777776543 45889999999999999999999999


Q ss_pred             c-CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 F-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~-~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      + +++|+||||||+....+..                +.+.++|++++++|+.++++++++++|.|++.+.++||++||.
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~  152 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSKPTL----------------DYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSI  152 (266)
T ss_dssp             HTTCCSEEEEECCC------C----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--
T ss_pred             hCCCCcEEEECCCCCCCCChh----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccc
Confidence            9 8999999999986543332                2388999999999999999999999999988778999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||++++.++++++.++  .+++|
T Consensus       153 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  189 (266)
T 1xq1_A          153 AGVVSA-------------------------------------------SVGSIYSATKGALNQLARNLACEWASDGIRA  189 (266)
T ss_dssp             ---------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             hhccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEE
Confidence            876543                                           345789999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++....                ...+|+|+|+.++++++......+|+.+..++.
T Consensus       190 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          190 NAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             EEEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             EEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            9999999999985431                124899999999999987777889999888775

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.4e-37  Score=269.13  Aligned_cols=225  Identities=27%  Similarity=0.319  Sum_probs=194.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||+++|++|+++|++|++++|+.++.++..+++...+ .++.++.+|++|.++++++++++.+.+
T Consensus        10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A           10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999887777777776543 468999999999999999999999999


Q ss_pred             CCccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+||||||+.. ..+..                +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~  152 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAE----------------DMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMS  152 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTT----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             CCCCEEEECCCCCCCCCCcc----------------cCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecch
Confidence            99999999999865 22222                23889999999999999999999999999877779999999988


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCc--hhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANA--AAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      +..+.                                           ++.  ..|++||++++.++++++.++  .+|+
T Consensus       153 ~~~~~-------------------------------------------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~  189 (260)
T 3awd_A          153 GLIVN-------------------------------------------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIR  189 (260)
T ss_dssp             GTSCC-------------------------------------------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hcccC-------------------------------------------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            76543                                           223  789999999999999999998  4899


Q ss_pred             EEEeecceeecCccc-CC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTY-NA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~-~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |++|+||++.|++.. ..                ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       190 v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  256 (260)
T 3awd_A          190 ANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG  256 (260)
T ss_dssp             EEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence            999999999999865 11                135899999999999987777789988887765

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=3.1e-37  Score=271.53  Aligned_cols=229  Identities=22%  Similarity=0.283  Sum_probs=195.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||+||||+++|++|+++|++|++++|+.++.++..+.+...+ .++.++.+|++|.++++++++++.+.
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYG-VHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHC-SCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999999999999888777666665443 46889999999999999999999999


Q ss_pred             cCCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++++|+||||||+... .+...               +.+.++|++++++|+.+++++++.++|.|++++.++||++||.
T Consensus       109 ~g~id~li~~Ag~~~~~~~~~~---------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~  173 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQGPEID---------------VDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSI  173 (279)
T ss_dssp             HSCCSEEEECGGGSTTC--CCC---------------SSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCC
T ss_pred             hCCCCEEEECCcccccCCcccc---------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECch
Confidence            9999999999998654 22220               2378999999999999999999999999988778999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+..                                         +++...|++||++++.++++++.++  .+ +|
T Consensus       174 ~~~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v  211 (279)
T 3ctm_A          174 SGKIVNI-----------------------------------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RV  211 (279)
T ss_dssp             TTSCC--------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EE
T ss_pred             HhccCCC-----------------------------------------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CE
Confidence            8765410                                         1456899999999999999999998  37 99


Q ss_pred             EEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||++.|++....               ...+|+|+|+.++++++......+|+.+..++..
T Consensus       212 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG~  276 (279)
T 3ctm_A          212 NTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGSDVVIDGGY  276 (279)
T ss_dssp             EEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCccCCEEEECCCe
Confidence            9999999999986531               1358999999999999987778999999888763

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-37  Score=271.27  Aligned_cols=234  Identities=23%  Similarity=0.254  Sum_probs=195.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||+++|++|+++|++|++++|+..+..+..+++....+.++.++.+|++|.++++++++++.+.+
T Consensus        11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   90 (265)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            57899999999999999999999999999999999987777766666654434568999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~  161 (290)
                      +++|+||||||.....+..                +.+.++|++.+++|+.++++++++++|.|++++ .++||++||..
T Consensus        91 ~~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~  154 (265)
T 1h5q_A           91 GPISGLIANAGVSVVKPAT----------------ELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMS  154 (265)
T ss_dssp             CSEEEEEECCCCCCCSCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CCCCEEEECCCcCCCCchh----------------hCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCch
Confidence            9999999999987543322                238899999999999999999999999998655 48999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+....       .                             ....+...|++||++++.++++++.|+  .+|+||
T Consensus       155 ~~~~~~~~-------~-----------------------------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  198 (265)
T 1h5q_A          155 SQIINQSS-------L-----------------------------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVN  198 (265)
T ss_dssp             GTSCCEEE-------T-----------------------------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hhcccccc-------c-----------------------------cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEE
Confidence            76542100       0                             000235789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||++.|++....               ...+|+|+|+.+++++.......+|+.+..++..
T Consensus       199 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  262 (265)
T 1h5q_A          199 ALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  262 (265)
T ss_dssp             EEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             EEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHhhccCchhcCcCcEEEecCCE
Confidence            999999999986542               1358999999999999887778899988877653

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=8.6e-38  Score=271.07  Aligned_cols=222  Identities=27%  Similarity=0.322  Sum_probs=191.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcE-EEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNV-IFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|++|||||+||||+++|++|+++|++|++++|+++++++..+++.    .++ .++.+|++|.++++++++++.+
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----AAVAARIVADVTDAEAMTAAAAEAEA   82 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----ccceeEEEEecCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999887777666652    346 8899999999999999999988


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                       ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||.
T Consensus        83 -~~~id~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~  145 (254)
T 2wsb_A           83 -VAPVSILVNSAGIARLHDALE----------------TDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSM  145 (254)
T ss_dssp             -HSCCCEEEECCCCCCCBCSTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             -hCCCcEEEECCccCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecc
Confidence             899999999999875443332                388999999999999999999999999988778999999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCc--hhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANA--AAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      .+..+.                                           ++.  ..|++||++++.++++++.++  .++
T Consensus       146 ~~~~~~-------------------------------------------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi  182 (254)
T 2wsb_A          146 SGTIVN-------------------------------------------RPQFASSYMASKGAVHQLTRALAAEWAGRGV  182 (254)
T ss_dssp             GGTSCC-------------------------------------------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             hhccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCe
Confidence            876543                                           223  789999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++++|+||++.|++.+..                 ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       183 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  250 (254)
T 2wsb_A          183 RVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGAILAVDGG  250 (254)
T ss_dssp             EEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            999999999999975321                 135899999999999987777889999988765

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=4.7e-38  Score=268.30  Aligned_cols=200  Identities=24%  Similarity=0.264  Sum_probs=172.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |+++++|++|||||++|||+++|++|+++|++|++++|+.+                     +|++|+++++++++++  
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------cCCCCHHHHHHHHHHh--
Confidence            78899999999999999999999999999999999999864                     8999999999998865  


Q ss_pred             hcCCccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                        +++|+||||||... ..+..                +.+.++|++.+++|+.++++++++++|+|++  .|+||++||
T Consensus        58 --g~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS  117 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVV----------------DVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSG  117 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTT----------------TSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECC
T ss_pred             --CCCCEEEECCCCCCCCCCcc----------------cCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecc
Confidence              89999999999873 33332                3389999999999999999999999999975  589999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+.+|+||
T Consensus       118 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn  154 (223)
T 3uce_A          118 MLSRKVV-------------------------------------------ANTYVKAAINAAIEATTKVLAKELAPIRVN  154 (223)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTSEEE
T ss_pred             hhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            9887654                                           567899999999999999999999669999


Q ss_pred             EeecceeecCcccCCC-------------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG-------------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~-------------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|++.....                   ..+|||+|+.+++++..  ...+|+.+..++..
T Consensus       155 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~--~~~tG~~i~vdgG~  220 (223)
T 3uce_A          155 AISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN--SYMTGTVIDVDGGA  220 (223)
T ss_dssp             EEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC--TTCCSCEEEESTTG
T ss_pred             EEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC--CCCCCcEEEecCCe
Confidence            9999999999876531                   24899999999999873  56899999988764

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-37  Score=268.19  Aligned_cols=228  Identities=28%  Similarity=0.368  Sum_probs=182.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.++.++.. ++   .+.++.++.+|+++.++++++++++.+.
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SI---KDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TC---CCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hc---cCCceEEEEeecCCHHHHHHHHHHHHHh
Confidence            468999999999999999999999999  99999999987765432 22   2346899999999999999999999999


Q ss_pred             cC--CccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------C--
Q 039097           82 FG--KLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------D--  150 (290)
Q Consensus        82 ~~--~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~--  150 (290)
                      ++  ++|+||||||+.. ..+..                +.+.++|++++++|+.++++++++++|.|+++      +  
T Consensus        77 ~g~~~id~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~  140 (250)
T 1yo6_A           77 VGSDGLSLLINNAGVLLSYGTNT----------------EPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQL  140 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTTS----------------CCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCC
T ss_pred             cCCCCCcEEEECCcccCCCcccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcc
Confidence            98  9999999999875 33322                23889999999999999999999999999765      4  


Q ss_pred             ---CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 039097          151 ---SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR  227 (290)
Q Consensus       151 ---~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~  227 (290)
                         .++||++||..+..+...                                    ....+++...|++||++++.+++
T Consensus       141 ~~~~~~iv~isS~~~~~~~~~------------------------------------~~~~~~~~~~Y~~sK~a~~~~~~  184 (250)
T 1yo6_A          141 SVSRAAVITISSGLGSITDNT------------------------------------SGSAQFPVLAYRMSKAAINMFGR  184 (250)
T ss_dssp             CTTTCEEEEECCGGGCSTTCC------------------------------------STTSSSCBHHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEEeccCccccCCcc------------------------------------cccccCCccHHHHHHHHHHHHHH
Confidence               689999999987654210                                    00011356789999999999999


Q ss_pred             HHHhhC--CCeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          228 ILAKKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       228 ~la~e~--~~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++.++  .+++|++|+||++.|++.+.....+|+++|+.+++++.......+|+++..++.
T Consensus       185 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  246 (250)
T 1yo6_A          185 TLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNLK  246 (250)
T ss_dssp             HHHHHTGGGTCEEEEEECCCC-------------HHHHHHHHHHHTTCCGGGTTCEEETTEE
T ss_pred             HHHHHhccCCeEEEEEcCCceecCCCCCCCCCCHHHHHHHHHHHHhcccccCCCeEEEECCc
Confidence            999999  489999999999999998877788999999999999988777789999987765

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=1e-37  Score=269.49  Aligned_cols=225  Identities=28%  Similarity=0.349  Sum_probs=179.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|++|||||+||||+++|++|+++|++|+++ .|++...++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            5889999999999999999999999999999999 677777777666665543 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||.....+..                +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~  144 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLML----------------KMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIA  144 (247)
T ss_dssp             HSCCCEEEECC-------------------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--
T ss_pred             cCCCCEEEECCCCCCCCccc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChh
Confidence            99999999999986433322                23778999999999999999999999999877779999999997


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.++  .+++||
T Consensus       145 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  181 (247)
T 2hq1_A          145 GIIGN-------------------------------------------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCN  181 (247)
T ss_dssp             --------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence            76543                                           456889999999999999999998  489999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....               ...+|+|+|+.+++++..+....+|+.+..++.
T Consensus       182 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          182 AVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             EEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            999999999875431               135899999999999987777788998887765

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3.7e-38  Score=272.50  Aligned_cols=211  Identities=28%  Similarity=0.253  Sum_probs=182.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLAL-NGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++|++|||||++|||+++|++|++ .|+.|++.+|+....           ...+.++.+|++|.++++++++.+.  +
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-----------~~~~~~~~~Dv~~~~~v~~~~~~~~--~   68 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-----------AENLKFIKADLTKQQDITNVLDIIK--N   68 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-----------CTTEEEEECCTTCHHHHHHHHHHTT--T
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-----------cccceEEecCcCCHHHHHHHHHHHH--h
Confidence            4689999999999999999999999 788999999986521           1257899999999999999996554  6


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|+++  ++||++||..+
T Consensus        69 ~~id~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~  130 (244)
T 4e4y_A           69 VSFDGIFLNAGILIKGSIFD----------------IDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQC  130 (244)
T ss_dssp             CCEEEEEECCCCCCCBCTTT----------------SCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCCccc----------------CCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHH
Confidence            79999999999876544433                3899999999999999999999999999854  89999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+++++++|+.|+  .+|+||+
T Consensus       131 ~~~~-------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~  167 (244)
T 4e4y_A          131 FIAK-------------------------------------------PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNT  167 (244)
T ss_dssp             TCCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             ccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            7654                                           567899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++.+..                          ...+|||+|+.+++++++.....+|+.+..++..
T Consensus       168 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~  241 (244)
T 4e4y_A          168 VCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGGY  241 (244)
T ss_dssp             EEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccCCeEeECCCc
Confidence            99999999975431                          2358999999999999988889999999988764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=271.13  Aligned_cols=226  Identities=26%  Similarity=0.277  Sum_probs=190.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC------CCcEEEEEeeCCCHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG------FDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~------~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      ++++|++|||||+||||+++|++|+++|++|++++|+.++.++..+++...+      ..++.++.+|++|.++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            6889999999999999999999999999999999999887777666554332      1358899999999999999999


Q ss_pred             HHHhhcCCc-cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeE
Q 039097           77 FIRSHFGKL-DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARI  154 (290)
Q Consensus        77 ~~~~~~~~i-d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~i  154 (290)
                      ++.+.++++ |+||||||.....+..                +.+.++|++.+++|+.++++++++++|.|++++ .++|
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~i  147 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQDEFLL----------------HMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSI  147 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHhCCCCeEEEECCCcCCCcchh----------------hCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceE
Confidence            999999999 9999999987543322                238899999999999999999999999998765 6899


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||..+..+.                                           ++...|++||++++.+++.++.++ 
T Consensus       148 v~isS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~  184 (264)
T 2pd6_A          148 INISSIVGKVGN-------------------------------------------VGQTNYAASKAGVIGLTQTAARELG  184 (264)
T ss_dssp             EEECCTHHHHCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             EEECChhhccCC-------------------------------------------CCChhhHHHHHHHHHHHHHHHHHhh
Confidence            999998776543                                           456899999999999999999998 


Q ss_pred             -CCeEEEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 -PNFCINCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 -~~i~vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                       .+++|++|+||++.|++....               ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       185 ~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  254 (264)
T 2pd6_A          185 RHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGG  254 (264)
T ss_dssp             GGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence             489999999999999985432               124889999999999987777889999888775

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.4e-37  Score=268.17  Aligned_cols=215  Identities=24%  Similarity=0.294  Sum_probs=185.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|++|||||++|||+++|++|+++|++|++++|++++   ..+++   +   +.++.+|+++ ++++++++++.+.++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~---~~~~~~D~~~-~~~~~~~~~~~~~~g~i   71 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G---AVPLPTDLEK-DDPKGLVKRALEALGGL   71 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T---CEEEECCTTT-SCHHHHHHHHHHHHTSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C---cEEEecCCch-HHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999999999999765   22333   1   7788999999 99999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||..+..+
T Consensus        72 d~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  135 (239)
T 2ekp_A           72 HVLVHAAAVNVRKPALE----------------LSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTA  135 (239)
T ss_dssp             CEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred             CEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccC
Confidence            99999999875443332                38899999999999999999999999998877899999999987653


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      ..                                         +++...|++||++++.++++++.|+  .+|+||+|+|
T Consensus       136 ~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  174 (239)
T 2ekp_A          136 GG-----------------------------------------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP  174 (239)
T ss_dssp             CT-----------------------------------------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             CC-----------------------------------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEe
Confidence            20                                         1346899999999999999999998  4899999999


Q ss_pred             ceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          244 GYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       244 G~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |++.|++....                 ...+|||+|+.+++++++.....+|+.+..++.
T Consensus       175 g~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          175 GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             CSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence            99999985321                 135899999999999998778899999998876

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=4.5e-38  Score=271.48  Aligned_cols=216  Identities=13%  Similarity=0.063  Sum_probs=184.1

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |. +.++|++|||||++|||+++|++|+++|++|++++|++++.+           ....++.+|++|.++++++++++.
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~~   69 (241)
T 1dhr_A            1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVG   69 (241)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------CCcEEEEcCCCCHHHHHHHHHHHH
Confidence            44 467899999999999999999999999999999999976532           135678999999999999999999


Q ss_pred             hhc--CCccEEEEccccCCCCCC-CCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEE
Q 039097           80 SHF--GKLDILVNNAGITGISSD-ADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVN  156 (290)
Q Consensus        80 ~~~--~~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~  156 (290)
                      +++  +++|+||||||+....+. .                +.+.++|++.+++|+.++++++++++|+|++  +++||+
T Consensus        70 ~~~~~g~iD~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~  131 (241)
T 1dhr_A           70 KLLGDQKVDAILCVAGGWAGGNAKS----------------KSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTL  131 (241)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTC----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEE
T ss_pred             HHhCCCCCCEEEEcccccCCCCCcc----------------cCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEE
Confidence            999  799999999998754333 2                2378999999999999999999999999975  489999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC--
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--  234 (290)
                      +||..+..+.                                           ++...|++||+++++++++++.|+.  
T Consensus       132 isS~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~  168 (241)
T 1dhr_A          132 AGAKAALDGT-------------------------------------------PGMIGYGMAKGAVHQLCQSLAGKNSGM  168 (241)
T ss_dssp             ECCGGGGSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSC
T ss_pred             ECCHHHccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999887653                                           5678999999999999999999974  


Q ss_pred             --CeEEEEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          235 --NFCINCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       235 --~i~vn~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                        +|+||+|+||+++|++....       ...+||++|+.++++++......+|+++..++..
T Consensus       169 ~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          169 PSGAAAIAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVTTD  231 (241)
T ss_dssp             CTTCEEEEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEEET
T ss_pred             CCCeEEEEEecCcccCccccccCcchhhccCCCHHHHHHHHHHHhcCCCcCccceEEEEeCCC
Confidence              79999999999999986532       2357899999999999888888999999887643

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=7.6e-38  Score=268.15  Aligned_cols=214  Identities=21%  Similarity=0.189  Sum_probs=175.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.++.+|+++.++++++++++.+.   .|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d   74 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----SNNVGYRARDLASHQEVEQLFEQLDSI---PS   74 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----SSCCCEEECCTTCHHHHHHHHHSCSSC---CS
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hhccCeEeecCCCHHHHHHHHHHHhhc---CC
Confidence            68999999999999999999999999999999988777666555    346889999999999999999877543   49


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +||||||.....+..                +.+.++|++++++|+.+++++++.++|.|+++.+ +||++||..+..+.
T Consensus        75 ~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~  137 (230)
T 3guy_A           75 TVVHSAGSGYFGLLQ----------------EQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPK  137 (230)
T ss_dssp             EEEECCCCCCCSCGG----------------GSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCC
T ss_pred             EEEEeCCcCCCCccc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCC
Confidence            999999987544433                3389999999999999999999999999987654 99999999887654


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|++||+|+++++++++.|+  .+|+||+|+||
T Consensus       138 -------------------------------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG  174 (230)
T 3guy_A          138 -------------------------------------------AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPG  174 (230)
T ss_dssp             -------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEEC
T ss_pred             -------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECC
Confidence                                                       567899999999999999999999  38999999999


Q ss_pred             eeecCcccCC-------CCCChhhhccchhhhhhcc-CCCCceeEeecCcc
Q 039097          245 YVKTEMTYNA-------GRLTVEEGAESPVWLALLH-KGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~~~~  287 (290)
                      ++.|++.+..       ...+|||+|+.+++++..+ ....+|+.+..+..
T Consensus       175 ~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~~  225 (230)
T 3guy_A          175 GMATEFWETSGKSLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREGH  225 (230)
T ss_dssp             CC----------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC---
T ss_pred             cccChHHHhcCCCCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCCCC
Confidence            9999997654       2468999999999988744 45789998887654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1.1e-36  Score=267.54  Aligned_cols=226  Identities=20%  Similarity=0.262  Sum_probs=193.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++|+....++..+++...  .++.++.+|++|.++++++++++.+.+
T Consensus        13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999999999999999999999999999987766666555321  268999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||.......              ...+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+
T Consensus        91 ~~id~li~~Ag~~~~~~~--------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~  156 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPY--------------SILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS  156 (278)
T ss_dssp             SCCCEEEECCCCCCSSCS--------------STTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG
T ss_pred             CCCCEEEECCcccCCCCC--------------ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc
Confidence            999999999998643110              112338899999999999999999999999999877899999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCC-CchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPA-NAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      ..+.                                           + +...|++||++++.++++++.|+  .+|+|+
T Consensus       157 ~~~~-------------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  193 (278)
T 2bgk_A          157 FTAG-------------------------------------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN  193 (278)
T ss_dssp             TCCC-------------------------------------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             cCCC-------------------------------------------CCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            6543                                           2 45789999999999999999998  489999


Q ss_pred             EeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|++....                    ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       194 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  261 (278)
T 2bgk_A          194 CVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG  261 (278)
T ss_dssp             EEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCCCEEEECCc
Confidence            999999999986532                    135899999999999987777889999888765

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=1.5e-37  Score=300.69  Aligned_cols=219  Identities=25%  Similarity=0.297  Sum_probs=185.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++.+|.  ..++..+++...+ .++..+.+|++  .+.+++++++.+++
T Consensus       319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~g-~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG-GEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHTT-CEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhcC-CeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            6789999999999999999999999999999999874  2455566665543 35777788884  55678899999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |++|+||||||+....+..+                .+.++|++++++|+.|+|+++++++|+|++++.|+||++||..+
T Consensus       394 G~iDiLVnNAGi~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag  457 (604)
T 2et6_A          394 GTIDILVNNAGILRDRSFAK----------------MSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG  457 (604)
T ss_dssp             SCCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred             CCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence            99999999999875444333                38999999999999999999999999999888899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+|+.+|+++|+.|+  .+|+||+
T Consensus       458 ~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~  494 (604)
T 2et6_A          458 IYGN-------------------------------------------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNI  494 (604)
T ss_dssp             HSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             ccCC-------------------------------------------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            7654                                           567899999999999999999999  4899999


Q ss_pred             eecceeecCcccCC------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+ .|+|....      ...+||++|..++|++++... .+|+++..++.
T Consensus       495 v~PG~-~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~~~-itG~~~~vdGG  545 (604)
T 2et6_A          495 VAPHA-ETAMTLSIMREQDKNLYHADQVAPLLVYLGTDDVP-VTGETFEIGGG  545 (604)
T ss_dssp             EEECC-CCCC---------CCSSCGGGTHHHHHHTTSTTCC-CCSCEEEEETT
T ss_pred             EcCCC-CCccccccCchhhccCCCHHHHHHHHHHHhCCccC-CCCcEEEECCC
Confidence            99996 99986542      245899999999999998777 99999988764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.5e-37  Score=265.95  Aligned_cols=225  Identities=22%  Similarity=0.304  Sum_probs=194.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||++++++|+++|++|++++|++++.++..+++...+ .++.++.+|++|.++++++++++.+.+
T Consensus         8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A            8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999999999888777777776544 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||.....+.                 +.+.++|++.+++|+.+++++++.++|.|++.+.++||++||..+
T Consensus        87 ~~~d~vi~~Ag~~~~~~~-----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~  149 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPF-----------------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA  149 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCCC-----------------CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh
Confidence            999999999998654322                 227899999999999999999999999998877789999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||++++.+++.++.++  .++++|+
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~  186 (255)
T 1fmc_A          150 ENKN-------------------------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNG  186 (255)
T ss_dssp             TCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             cCCC-------------------------------------------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            6543                                           456889999999999999999998  5899999


Q ss_pred             eecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||++.|++....                ...+|+|+|+.+++++.......+|+.+..++..
T Consensus       187 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  250 (255)
T 1fmc_A          187 IAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             EEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCccccCCCcEEEECCce
Confidence            99999999875431                1348999999999999877667889888877654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=7e-38  Score=302.94  Aligned_cols=220  Identities=24%  Similarity=0.276  Sum_probs=188.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---------ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE---------KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      ++++|++|||||++|||+++|++|+++|++|++.+|+.         +.+++..+++...++ +   ..+|++|.+++++
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~-~---~~~d~~d~~~~~~   80 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGG-V---AVADYNNVLDGDK   80 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTC-E---EEEECCCTTCHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCC-e---EEEEcCCHHHHHH
Confidence            57899999999999999999999999999999998765         556677777765543 2   2369999988999


Q ss_pred             HHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCe
Q 039097           74 VADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSAR  153 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~  153 (290)
                      +++++.+++|+||+||||||+....+..+                .+.++|++++++|+.|+|+++++++|+|++++.|+
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~  144 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILRDASMKK----------------MTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGR  144 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence            99999999999999999999875444333                38999999999999999999999999999887899


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                           ++...|++||+|+.+|+++|+.|+
T Consensus       145 IVnisS~ag~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~El  181 (604)
T 2et6_A          145 IVNTSSPAGLYGN-------------------------------------------FGQANYASAKSALLGFAETLAKEG  181 (604)
T ss_dssp             EEEECCHHHHHCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCHHHcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHh
Confidence            9999999887654                                           567899999999999999999998


Q ss_pred             --CCeEEEEeecceeecCcccCC------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          234 --PNFCINCVCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                        .||+||+|+|| +.|+|....      ...+||++|..++++++.. ...+|+++..++.
T Consensus       182 ~~~gIrVn~v~Pg-~~T~m~~~~~~~~~~~~~~pe~vA~~v~~L~s~~-~~itG~~~~vdgG  241 (604)
T 2et6_A          182 AKYNIKANAIAPL-ARSRMTESIMPPPMLEKLGPEKVAPLVLYLSSAE-NELTGQFFEVAAG  241 (604)
T ss_dssp             GGGTEEEEEEEEC-CCCHHHHTTSCHHHHTTCSHHHHHHHHHHHTSSS-CCCCSCEEEEETT
T ss_pred             CccCeEEEEEccC-CcCccccccCChhhhccCCHHHHHHHHHHHhCCc-ccCCCCEEEECCC
Confidence              48999999998 688886542      2468999999999999987 7889999887764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.2e-37  Score=276.24  Aligned_cols=224  Identities=28%  Similarity=0.348  Sum_probs=181.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.+++||++|||||++|||+++|++|+++|++|++++|+..+.++..+++    +.++.++.+|++|.++++++++++  
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~d~~~v~~~~~~~--   84 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----AGQVEVRELDLQDLSSVRRFADGV--   84 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----SSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----cCCeeEEEcCCCCHHHHHHHHHhc--
Confidence            56789999999999999999999999999999999999988777665554    357999999999999999998876  


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                        +++|+||||||+..+.  .                +.+.++|++++++|+.++++++++++|.|++    +||++||.
T Consensus        85 --~~iD~lv~nAg~~~~~--~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~  140 (291)
T 3rd5_A           85 --SGADVLINNAGIMAVP--Y----------------ALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSM  140 (291)
T ss_dssp             --CCEEEEEECCCCCSCC--C----------------CBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCG
T ss_pred             --CCCCEEEECCcCCCCc--c----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeech
Confidence              7899999999986432  1                2278899999999999999999999999974    89999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC--e
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN--F  236 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~--i  236 (290)
                      .+..+.....                             +.... ....++...|++||+|++.++++++.|+  .+  |
T Consensus       141 ~~~~~~~~~~-----------------------------~~~~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i  190 (291)
T 3rd5_A          141 AHWPGRINLE-----------------------------DLNWR-SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPL  190 (291)
T ss_dssp             GGTTCCCCSS-----------------------------CTTCS-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             hhccCCCCcc-----------------------------ccccc-ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence            8775431100                             00000 0111456889999999999999999998  35  9


Q ss_pred             EEEEeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          237 CINCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +||+|+||+|.|++.+...               ..+||++|+.++++++.+  ..+|+++..++
T Consensus       191 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~l~~~~--~~~G~~~~vdg  253 (291)
T 3rd5_A          191 RALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQTLYAASQD--LPGDSFVGPRF  253 (291)
T ss_dssp             EEEEECCSGGGSCC--------------------CHHHHHHHHHHHHHHHSC--CCTTCEEEETT
T ss_pred             EEEEeeCCCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHcCC--CCCCceeCCcc
Confidence            9999999999999977642               125999999999999974  78999998765

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.8e-37  Score=268.13  Aligned_cols=227  Identities=21%  Similarity=0.250  Sum_probs=193.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||+||||++++++|+++|++|++++|+ ++++++..+++...+ .++.++.+|++|.++++++++++.
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999 777777777776543 468999999999999999999999


Q ss_pred             hhcCCccEEEEcccc-CCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--C---Ce
Q 039097           80 SHFGKLDILVNNAGI-TGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--S---AR  153 (290)
Q Consensus        80 ~~~~~id~li~~Ag~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~---~~  153 (290)
                      +.++++|+||||||. ....+..                +.+.++|++++++|+.++++++++++|.|++..  .   ++
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLP----------------EIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSA  144 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             HHcCCCCEEEECCCCcCCcCccc----------------cCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcE
Confidence            999999999999997 3322222                237899999999999999999999999997543  3   89


Q ss_pred             EEEEcCCCCcc-cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh
Q 039097          154 IVNVSSSLGKL-MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK  232 (290)
Q Consensus       154 iV~isS~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e  232 (290)
                      ||++||..+.. +.                                           ++...|++||++++.+++.++.+
T Consensus       145 iv~~sS~~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e  181 (258)
T 3afn_B          145 VISTGSIAGHTGGG-------------------------------------------PGAGLYGAAKAFLHNVHKNWVDF  181 (258)
T ss_dssp             EEEECCTHHHHCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecchhhccCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence            99999987654 32                                           45689999999999999999999


Q ss_pred             C--CCeEEEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCC-CCceeEeecCcc
Q 039097          233 Y--PNFCINCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKG-GPSGLFFSRKEE  287 (290)
Q Consensus       233 ~--~~i~vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~-~~~g~~~~~~~~  287 (290)
                      +  .+|+||+|+||++.|++....               ...+|+|+|+.+++++..... ..+|+.+..++.
T Consensus       182 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg  254 (258)
T 3afn_B          182 HTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGG  254 (258)
T ss_dssp             HGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTT
T ss_pred             hcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCC
Confidence            8  489999999999999986542               135899999999999886654 678988887764

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-37  Score=268.58  Aligned_cols=226  Identities=24%  Similarity=0.281  Sum_probs=191.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.++++|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ ..++.++.+|++|.++++++++++.
T Consensus        27 m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  106 (279)
T 1xg5_A           27 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR  106 (279)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999888887777776654 2468899999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCC--CeEEEE
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDS--ARIVNV  157 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~--~~iV~i  157 (290)
                      +.++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++.+.  ++||++
T Consensus       107 ~~~g~iD~vi~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~i  170 (279)
T 1xg5_A          107 SQHSGVDICINNAGLARPDTLLS----------------GSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIINI  170 (279)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred             HhCCCCCEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEE
Confidence            99999999999999875443332                388999999999999999999999999987763  899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----  233 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----  233 (290)
                      ||..+.....                                         .++...|+++|++++.+++.++.|+    
T Consensus       171 sS~~~~~~~~-----------------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  209 (279)
T 1xg5_A          171 NSMSGHRVLP-----------------------------------------LSVTHFYSATKYAVTALTEGLRQELREAQ  209 (279)
T ss_dssp             CCGGGTSCCS-----------------------------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cChhhcccCC-----------------------------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcC
Confidence            9998752110                                         0356789999999999999999996    


Q ss_pred             CCeEEEEeecceeecCcccC---------------CCCCChhhhccchhhhhhccCCCCceeEee
Q 039097          234 PNFCINCVCPGYVKTEMTYN---------------AGRLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~---------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      .+|+||+|+||++.|++...               ....+|+|+|+.+++++..+.....|.+.-
T Consensus       210 ~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~~~~~g~i~i  274 (279)
T 1xg5_A          210 THIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQM  274 (279)
T ss_dssp             CCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             CCeEEEEEecCcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHHHhcCCcceEeeeEEE
Confidence            38999999999999998321               124689999999999999887766776543

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=7.5e-37  Score=271.91  Aligned_cols=226  Identities=19%  Similarity=0.157  Sum_probs=191.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||+++|++|+++|++|++++|+.++.++..+++....+.++.++.+|++|.++++++++++.+.+
T Consensus        23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  102 (302)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999888887777765534568999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhc-cCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQ-LSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~-~~~~~~iV~isS~~  161 (290)
                      +++|+||||||.....+..                +.+.++|++.+++|+.+++++++.++|.|+ +...++||++||..
T Consensus       103 g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~  166 (302)
T 1w6u_A          103 GHPNIVINNAAGNFISPTE----------------RLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY  166 (302)
T ss_dssp             CSCSEEEECCCCCCCSCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTH
T ss_pred             CCCCEEEECCCCCCCCccc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccc
Confidence            9999999999976443322                238899999999999999999999999997 44568999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||++++.++++++.++  .+|+||
T Consensus       167 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~  203 (302)
T 1w6u_A          167 AETGS-------------------------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN  203 (302)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             cccCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            76543                                           456889999999999999999998  489999


Q ss_pred             EeecceeecC-cccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTE-MTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~-~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||++.|+ +....                 ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       204 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  269 (302)
T 1w6u_A          204 VIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGG  269 (302)
T ss_dssp             EEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccCCCEEEECCC
Confidence            9999999997 43221                 124899999999999987777789998887664

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-37  Score=270.05  Aligned_cols=215  Identities=28%  Similarity=0.368  Sum_probs=184.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|++|||||++|||+++|++|+++|++|++++|+.++.++..+++.... +.++.++.+|++|.++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            678999999999999999999999999999999999887777777765432 3468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEEEcC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVNVSS  159 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~isS  159 (290)
                      +++|+||||||+.                        +.++|++.+++|+.+++.+++.++|.|++..   .++||++||
T Consensus        85 g~id~lv~~Ag~~------------------------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS  140 (267)
T 2gdz_A           85 GRLDILVNNAGVN------------------------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  140 (267)
T ss_dssp             SCCCEEEECCCCC------------------------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCEEEECCCCC------------------------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence            9999999999975                        3467899999999999999999999998653   589999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH--HhhC--CC
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL--AKKY--PN  235 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l--a~e~--~~  235 (290)
                      ..+..+.                                           ++...|++||++++++++++  +.|+  .+
T Consensus       141 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~g  177 (267)
T 2gdz_A          141 LAGLMPV-------------------------------------------AQQPVYCASKHGIVGFTRSAALAANLMNSG  177 (267)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred             ccccCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHHHhccCC
Confidence            9887643                                           45688999999999999996  5666  58


Q ss_pred             eEEEEeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          236 FCINCVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+|+||++.|++....                       +..+|+|+|+.+++++++..  .+|+.+..++.
T Consensus       178 i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~--~~G~~~~v~gg  250 (267)
T 2gdz_A          178 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDDA--LNGAIMKITTS  250 (267)
T ss_dssp             EEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCTT--CSSCEEEEETT
T ss_pred             cEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcCcC--CCCcEEEecCC
Confidence            9999999999999974321                       13489999999999998653  78888877653

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.2e-37  Score=269.36  Aligned_cols=213  Identities=18%  Similarity=0.116  Sum_probs=182.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE-e--cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLT-A--RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|++|||||++|||+++|++|+++|++|+++ +  |+++++++..+++  .        .+|+.|.++++++++++.+.+
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~--------~~~~~~~~~v~~~~~~~~~~~   70 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--P--------GTIALAEQKPERLVDATLQHG   70 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--T--------TEEECCCCCGGGHHHHHGGGS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--C--------CCcccCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999 6  9987777666554  1        134448888999999999999


Q ss_pred             CCccEEEEccccCCC---CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           83 GKLDILVNNAGITGI---SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        83 ~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++|+||||||+...   .+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||
T Consensus        71 g~iD~lv~~Ag~~~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS  134 (244)
T 1zmo_A           71 EAIDTIVSNDYIPRPMNRLPLE----------------GTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITS  134 (244)
T ss_dssp             SCEEEEEECCCCCTTGGGCCST----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence            999999999998754   3332                338899999999999999999999999999887899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++...|++||+|+++++++++.|+  .+|+
T Consensus       135 ~~~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~  171 (244)
T 1zmo_A          135 SVGKKPL-------------------------------------------AYNPLYGPARAATVALVESAAKTLSRDGIL  171 (244)
T ss_dssp             GGGTSCC-------------------------------------------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhhCCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            9887654                                           456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcc---cC--------------C---CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMT---YN--------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~---~~--------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+++|++.   +.              .   ...+||++|+.+++++++.....+|+++..++.
T Consensus       172 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          172 LYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             EEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             EEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            99999999999997   31              1   135899999999999998777899999998875

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=3.1e-37  Score=268.11  Aligned_cols=213  Identities=24%  Similarity=0.301  Sum_probs=180.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCH-HHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADP-AAIHSVADFIR   79 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~-~~v~~~~~~~~   79 (290)
                      ++++|++|||||++|||+++|++|+++|++ |++++|+...  +..+++.... +.++.++.+|++|. ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            688999999999999999999999999996 9999998743  2334443332 34688999999998 99999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEE
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVN  156 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~  156 (290)
                      +.++++|+||||||+.                        +.++|++++++|+.++++++++++|.|+++.   .++||+
T Consensus        80 ~~~g~id~lv~~Ag~~------------------------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~  135 (254)
T 1sby_A           80 DQLKTVDILINGAGIL------------------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIAN  135 (254)
T ss_dssp             HHHSCCCEEEECCCCC------------------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEE
T ss_pred             HhcCCCCEEEECCccC------------------------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence            9999999999999974                        5578999999999999999999999997654   589999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++...|++||+++++++++++.++  .
T Consensus       136 isS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~  172 (254)
T 1sby_A          136 ICSVTGFNAI-------------------------------------------HQVPVYSASKAAVVSFTNSLAKLAPIT  172 (254)
T ss_dssp             ECCGGGTSCC-------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECchhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhccC
Confidence            9999887643                                           456899999999999999999987  4


Q ss_pred             CeEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          235 NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|+||+++|++.+..                 +..+||++|+.+++++.   ...+|+++..++.
T Consensus       173 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~~~~---~~~~G~~~~v~gG  239 (254)
T 1sby_A          173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIE---ANKNGAIWKLDLG  239 (254)
T ss_dssp             SEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHH---HCCTTCEEEEETT
T ss_pred             CeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHHHHHHH---cCCCCCEEEEeCC
Confidence            89999999999999986432                 22478999999999876   3467888877764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.3e-38  Score=284.64  Aligned_cols=223  Identities=14%  Similarity=0.237  Sum_probs=184.7

Q ss_pred             CCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcc---------cHHHHHHHHHhcC--CCcEEEEEeeCCCH--H
Q 039097            5 AKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEK---------GGLEAVEKLKHSG--FDNVIFHQLDVADP--A   69 (290)
Q Consensus         5 ~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~---------~~~~~~~~l~~~~--~~~~~~~~~Dl~~~--~   69 (290)
                      ++|++|||||++  |||+++|++|+++|++|++++|++.         +.+...+.+....  ...+.++.||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  9999999999999999998877652         2111111111111  12478889999988  8


Q ss_pred             ------------------HHHHHHHHHHhhcCCccEEEEccccCC--CCCCCCcccchhhhcccccccccChHHHHHhhh
Q 039097           70 ------------------AIHSVADFIRSHFGKLDILVNNAGITG--ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ  129 (290)
Q Consensus        70 ------------------~v~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (290)
                                        +++++++++.++++++|+||||||+..  ..+.                .+.+.++|+++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~----------------~~~~~~~~~~~~~  144 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDL----------------LNTSRKGYLDALS  144 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCG----------------GGCCHHHHHHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCc----------------ccCCHHHHHHHHH
Confidence                              999999999999999999999999742  2222                2348999999999


Q ss_pred             cccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 039097          130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP  209 (290)
Q Consensus       130 vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (290)
                      +|+.++++++++++|+|+++  |+||++||..+..+.                                           
T Consensus       145 vN~~g~~~l~~~~~p~m~~~--g~Iv~isS~~~~~~~-------------------------------------------  179 (329)
T 3lt0_A          145 KSSYSLISLCKYFVNIMKPQ--SSIISLTYHASQKVV-------------------------------------------  179 (329)
T ss_dssp             HHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCC-------------------------------------------
T ss_pred             HHhHHHHHHHHHHHHHHhhC--CeEEEEeCccccCCC-------------------------------------------
Confidence            99999999999999999875  899999999887654                                           


Q ss_pred             CCch-hhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccCC-------------------------------
Q 039097          210 ANAA-AYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYNA-------------------------------  254 (290)
Q Consensus       210 ~~~~-~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~~-------------------------------  254 (290)
                      ++.. .|++||+|+.+|+++|+.|+ +  +|+||+|+||+|.|+|.+..                               
T Consensus       180 ~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (329)
T 3lt0_A          180 PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGE  259 (329)
T ss_dssp             TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC------------------------------
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccccccccccccccccchhhccccc
Confidence            4454 89999999999999999998 4  89999999999999986542                               


Q ss_pred             -----------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          255 -----------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       255 -----------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                                                   ...+||++|+.++||+++.....+|+.+..+|..
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdGG~  322 (329)
T 3lt0_A          260 KEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGL  322 (329)
T ss_dssp             ------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             chhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcCCe
Confidence                                         1348999999999999988889999999998864

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=4.9e-37  Score=264.75  Aligned_cols=222  Identities=25%  Similarity=0.346  Sum_probs=190.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ||++|||||+||||+++|++|+++|++|+++ +|++++.++..+++...+ .++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999985 888877777766665443 46889999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||.....+..                +.+.++|++++++|+.+++++++.++|+|++++.++||++||..+..
T Consensus        80 id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~  143 (244)
T 1edo_A           80 IDVVVNNAGITRDTLLI----------------RMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI  143 (244)
T ss_dssp             CSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred             CCEEEECCCCCCCcCcc----------------cCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcC
Confidence            99999999987543322                23889999999999999999999999999877779999999987765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|++||++++.++++++.++  .+++||+|+
T Consensus       144 ~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  180 (244)
T 1edo_A          144 GN-------------------------------------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC  180 (244)
T ss_dssp             CC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred             CC-------------------------------------------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEe
Confidence            43                                           456899999999999999999998  589999999


Q ss_pred             cceeecCcccCC---------------CCCChhhhccchhhhhhc-cCCCCceeEeecCcc
Q 039097          243 PGYVKTEMTYNA---------------GRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEE  287 (290)
Q Consensus       243 PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~~~~  287 (290)
                      ||++.|++....               ...+|+|+|+.+++++.. .....+|+++..++.
T Consensus       181 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          181 PGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             ECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             eCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            999999985442               135899999999999843 345678999888765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1e-36  Score=267.66  Aligned_cols=213  Identities=26%  Similarity=0.316  Sum_probs=186.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||+||||+++|++|+++|++|++++|+++..++..+++...+ .++.++.+|++|.++++++++++.+.
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcC-CeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888887777776543 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|++++.++||++||..
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  169 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFA----------------TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA  169 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGG----------------GHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             CCCCcEEEECCCcCCCcchhh----------------CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechh
Confidence            999999999999875443322                3789999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-----CCe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-----PNF  236 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-----~~i  236 (290)
                      +..+.                                           ++...|++||++++.++++++.|+     .+|
T Consensus       170 ~~~~~-------------------------------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi  206 (272)
T 1yb1_A          170 GHVSV-------------------------------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGV  206 (272)
T ss_dssp             -CCCH-------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred             hcCCC-------------------------------------------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence            87643                                           345789999999999999999997     389


Q ss_pred             EEEEeecceeecCcccC-----CCCCChhhhccchhhhhhccC
Q 039097          237 CINCVCPGYVKTEMTYN-----AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~-----~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +||+|+||+++|++.+.     .+..+|+++|+.+++++..+.
T Consensus       207 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          207 KTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             EEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             EEEEEeCCcccCCccccccccccCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999998653     235799999999999987665

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=5.2e-37  Score=275.66  Aligned_cols=219  Identities=21%  Similarity=0.238  Sum_probs=185.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe---------cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA---------RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~---------r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      ++++|++|||||++|||+++|++|+++|++|++++         |+.++.++..+++...+..    ..+|+++.+++++
T Consensus         6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~----~~~D~~~~~~~~~   81 (319)
T 1gz6_A            6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK----AVANYDSVEAGEK   81 (319)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE----EEEECCCGGGHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe----EEEeCCCHHHHHH
Confidence            57899999999999999999999999999999975         4666677777777654422    3589999999999


Q ss_pred             HHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCe
Q 039097           74 VADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSAR  153 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~  153 (290)
                      +++++.+.++++|+||||||+....+..                +.+.++|+.++++|+.|+++++++++|+|++++.++
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~gr  145 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILRDRSFS----------------RISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGR  145 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCE
Confidence            9999999999999999999987543322                238899999999999999999999999998877899


Q ss_pred             EEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          154 IVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       154 iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      ||++||..+..+.                                           ++...|++||+|++.|+++|+.|+
T Consensus       146 IV~vsS~~~~~~~-------------------------------------------~~~~~Y~aSK~a~~~~~~~la~el  182 (319)
T 1gz6_A          146 IIMTASASGIYGN-------------------------------------------FGQANYSAAKLGLLGLANTLVIEG  182 (319)
T ss_dssp             EEEECCHHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEECChhhccCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999998776543                                           456899999999999999999998


Q ss_pred             --CCeEEEEeecceeecCcccCC------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          234 --PNFCINCVCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       234 --~~i~vn~v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                        .+|+||+|+||++ |++....      ...+|+++|+.+++++..+. ..+|++|..++
T Consensus       183 ~~~gI~vn~v~PG~~-t~~~~~~~~~~~~~~~~p~dvA~~~~~l~s~~~-~~tG~~~~v~G  241 (319)
T 1gz6_A          183 RKNNIHCNTIAPNAG-SRMTETVMPEDLVEALKPEYVAPLVLWLCHESC-EENGGLFEVGA  241 (319)
T ss_dssp             GGGTEEEEEEEEECC-STTTGGGSCHHHHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEET
T ss_pred             cccCEEEEEEeCCCc-cccccccCChhhhccCCHHHHHHHHHHHhCchh-hcCCCEEEECC
Confidence              4899999999998 8876542      23689999999999998653 56888887654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-36  Score=269.10  Aligned_cols=225  Identities=23%  Similarity=0.263  Sum_probs=192.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc----CCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS----GFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .+++|++|||||+||||+++|++|+++|++|++++|+.+++++..+++...    .+.++.++.+|+++.++++++++++
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888877777652    2446899999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .+.++++|+||||||.....+..                +.+.++|++++++|+.++++++++++|.+.+...++||++|
T Consensus        95 ~~~~g~id~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~is  158 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGGQFLSPAE----------------HISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNII  158 (303)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEEC
T ss_pred             HHHcCCCCEEEECCCCCCCCchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence            99999999999999976433322                23889999999999999999999999966555568999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |.. ..+.                                           ++...|+++|+++++++++++.++  .+|
T Consensus       159 S~~-~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  194 (303)
T 1yxm_A          159 VPT-KAGF-------------------------------------------PLAVHSGAARAGVYNLTKSLALEWACSGI  194 (303)
T ss_dssp             CCC-TTCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred             eec-ccCC-------------------------------------------CcchhhHHHHHHHHHHHHHHHHHhcccCe
Confidence            987 4332                                           456889999999999999999998  489


Q ss_pred             EEEEeecceeecCc--ccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEM--TYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~--~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||++.|++  ....                 ...+|+++|+.+++++.......+|+++..++.
T Consensus       195 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          195 RINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             EEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence            99999999999994  2110                 135899999999999988777889999888765

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=1.2e-36  Score=265.76  Aligned_cols=227  Identities=26%  Similarity=0.295  Sum_probs=193.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC---CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ++++|++|||||++|||+++|++|+++|   ++|++++|+..+.+. .+++...+ .++.++.+|+++.++++++++++.
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~   95 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNH-SNIHILEIDLRNFDAYDKLVADIE   95 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHC-TTEEEEECCTTCGGGHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccC-CceEEEEecCCChHHHHHHHHHHH
Confidence            4778999999999999999999999999   999999999877664 34444333 468999999999999999999999


Q ss_pred             hhcC--CccEEEEccccCC-CCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------C
Q 039097           80 SHFG--KLDILVNNAGITG-ISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------D  150 (290)
Q Consensus        80 ~~~~--~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~  150 (290)
                      +.++  ++|+||||||+.. ..+..                +.+.+++++++++|+.+++++++.++|.|+++      .
T Consensus        96 ~~~g~~~id~li~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~  159 (267)
T 1sny_A           96 GVTKDQGLNVLFNNAGIAPKSARIT----------------AVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQ  159 (267)
T ss_dssp             HHHGGGCCSEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             HhcCCCCccEEEECCCcCCCccccc----------------cCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccc
Confidence            9998  8999999999875 22222                23889999999999999999999999999865      3


Q ss_pred             -----CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHH
Q 039097          151 -----SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAY  225 (290)
Q Consensus       151 -----~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~  225 (290)
                           .++||++||..+..+...                                        .++...|++||++++.+
T Consensus       160 ~~~~~~~~iv~isS~~~~~~~~~----------------------------------------~~~~~~Y~~sK~a~~~~  199 (267)
T 1sny_A          160 PMGVGRAAIINMSSILGSIQGNT----------------------------------------DGGMYAYRTSKSALNAA  199 (267)
T ss_dssp             CSSTTTCEEEEECCGGGCSTTCC----------------------------------------SCCCHHHHHHHHHHHHH
T ss_pred             cccCCCceEEEEecccccccCCC----------------------------------------CCCchHHHHHHHHHHHH
Confidence                 589999999887654200                                        02457899999999999


Q ss_pred             HHHHHhhC--CCeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          226 TRILAKKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       226 ~~~la~e~--~~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++++.++  .+|+|++|+||+++|+|.....+.+|+++|+.+++++.......+|.++..++.
T Consensus       200 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~  263 (267)
T 1sny_A          200 TKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGT  263 (267)
T ss_dssp             HHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSC
T ss_pred             HHHHHHHhhcCCcEEEEeCCcceecCCCCCCCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCc
Confidence            99999998  489999999999999998887889999999999999998887889999987764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=3.4e-37  Score=268.10  Aligned_cols=215  Identities=16%  Similarity=0.108  Sum_probs=183.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||++|||+++|++|+++|++|++++|++++.++..+ +...+. ++..+     |.++++++++++.++++++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~-~~~~~-----d~~~v~~~~~~~~~~~g~iD   74 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYP-QLKPM-----SEQEPAELIEAVTSAYGQVD   74 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCT-TSEEC-----CCCSHHHHHHHHHHHHSCCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCC-cEEEE-----CHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999888776655 554432 33333     77888999999999999999


Q ss_pred             EEEEccccC-CCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           87 ILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      +||||||+. ...+..                +.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+
T Consensus        75 ~lv~nAg~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  138 (254)
T 1zmt_A           75 VLVSNDIFAPEFQPID----------------KYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP  138 (254)
T ss_dssp             EEEEECCCCCCCCCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSC
T ss_pred             EEEECCCcCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccC
Confidence            999999986 333322                338899999999999999999999999998877899999999988765


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeec
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCP  243 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~P  243 (290)
                      .                                           ++...|++||+++++++++++.|+  .+|+||+|+|
T Consensus       139 ~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  175 (254)
T 1zmt_A          139 W-------------------------------------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGP  175 (254)
T ss_dssp             C-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEE
T ss_pred             C-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec
Confidence            4                                           456899999999999999999998  4899999999


Q ss_pred             cee---------ecCcccCC--------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          244 GYV---------KTEMTYNA--------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       244 G~v---------~T~~~~~~--------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |++         +|++....              ...+|||+|+.+++++++.....+|+++..++.
T Consensus       176 G~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             SSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            999         89875531              135899999999999998777889999988875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.9e-36  Score=272.58  Aligned_cols=213  Identities=22%  Similarity=0.215  Sum_probs=171.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-----ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-----KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      +|++|++|||||++|||+++|++|+++|++|++++|+.     +++++..+.+... +.++.++.+|++|.+++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~-~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN-DVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc-CCcEEEEEeecCCHHHHHHHHHH
Confidence            57899999999999999999999999999999988863     3333433433333 34699999999999999999999


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      +.++++++|+||||||+....+..                +.+.++|++++++|+.|+++++++++|+|++++.|+||++
T Consensus        81 ~~~~~g~iD~lVnnAG~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~i  144 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMVFGPAE----------------AFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWI  144 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCBCSCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred             HHHHcCCCCEEEECCCcCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence            999999999999999987544433                2389999999999999999999999999998888999999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+....                                          +++...|++||+|+++++++++.|+  .+
T Consensus       145 sS~~~~~~~------------------------------------------~~~~~~Y~asKaa~~~~~~~la~el~~~g  182 (324)
T 3u9l_A          145 SSSSSAGGT------------------------------------------PPYLAPYFAAKAAMDAIAVQYARELSRWG  182 (324)
T ss_dssp             CCGGGTSCC------------------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ecchhccCC------------------------------------------CCcchhHHHHHHHHHHHHHHHHHHhhhhC
Confidence            999876432                                          1456889999999999999999998  48


Q ss_pred             eEEEEeecceeecCcccCC-----------------------------------CCCChhhhccchhhhhhccC
Q 039097          236 FCINCVCPGYVKTEMTYNA-----------------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-----------------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+||+|+||++.|++....                                   +..+|+++|+.++.....+.
T Consensus       183 I~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~  256 (324)
T 3u9l_A          183 IETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTAS  256 (324)
T ss_dssp             EEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCT
T ss_pred             cEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCC
Confidence            9999999999997763221                                   01477888888888887664

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.2e-36  Score=262.32  Aligned_cols=222  Identities=29%  Similarity=0.375  Sum_probs=190.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEE-EEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIF-HQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +|++|||||+||||+++|++|+++|++|+++ +|+.++.++..+++...+. ++.. +.+|++|.++++++++++.+.++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGS-PLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTC-SCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999999998 8988877777777765443 4555 89999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||+....+..                +.+.++|++.+++|+.+++++++.++|.|++.+.++||++||..+.
T Consensus        80 ~~d~li~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~  143 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLV----------------RMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGI  143 (245)
T ss_dssp             CCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH
T ss_pred             CCCEEEECCCCCCCCCcc----------------cCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhc
Confidence            999999999986543322                2388999999999999999999999999988777999999998776


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|++||++++.++++++.++  .+++++.|
T Consensus       144 ~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  180 (245)
T 2ph3_A          144 LGN-------------------------------------------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAV  180 (245)
T ss_dssp             HCC-------------------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             cCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEE
Confidence            543                                           456899999999999999999998  48999999


Q ss_pred             ecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||++.|++....               ...+|+|+|+.+++++..+....+|+++..++.
T Consensus       181 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  241 (245)
T 2ph3_A          181 APGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG  241 (245)
T ss_dssp             EECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             EEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence            9999999975532               134899999999999987767788998887764

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-37  Score=265.02  Aligned_cols=212  Identities=15%  Similarity=0.089  Sum_probs=181.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc-
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF-   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   82 (290)
                      |++|++|||||++|||+++|++|+++|++|++++|++++.+           ....++.+|++|.++++++++++.+.+ 
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   69 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQ   69 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------cccEEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999999976532           135678899999999999999999999 


Q ss_pred             -CCccEEEEccccCCCCCC-CCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           83 -GKLDILVNNAGITGISSD-ADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        83 -~~id~li~~Ag~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                       +++|+||||||+....+. .                +.+.++|++.+++|+.+++++++.++|+|++  .++||++||.
T Consensus        70 ~g~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~  131 (236)
T 1ooe_A           70 GSQVDGVFCVAGGWAGGSASS----------------KDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAA  131 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTS----------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCG
T ss_pred             CCCCCEEEECCcccCCCCCcc----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECch
Confidence             799999999998654333 2                2278999999999999999999999999975  4899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC----Ce
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP----NF  236 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~----~i  236 (290)
                      .+..+.                                           ++...|++||+++++++++++.|+.    +|
T Consensus       132 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi  168 (236)
T 1ooe_A          132 AAMGPT-------------------------------------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNS  168 (236)
T ss_dssp             GGGSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTC
T ss_pred             hhccCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCe
Confidence            887653                                           5678999999999999999999973    69


Q ss_pred             EEEEeecceeecCcccCC-------CCCChhhhccchhhhh-hccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLA-LLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~-~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+||+++|++....       ...+||++|+.+++++ ++.....+|+++..++.
T Consensus       169 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~~~~v~gg  227 (236)
T 1ooe_A          169 AVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKITTE  227 (236)
T ss_dssp             EEEEEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred             EEEEEecCcccCcchhhcCCCccccccCCHHHHHHHHHHHHcCCCcccccccEEEEecC
Confidence            999999999999986531       2358999999998555 66667889999887765

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.5e-36  Score=284.48  Aligned_cols=223  Identities=26%  Similarity=0.300  Sum_probs=187.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|+... ++..+.....   .+.++.||++|.++++++++++.+++
T Consensus       210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999999987432 2212222211   25689999999999999999999999


Q ss_pred             CC-ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GK-LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~-id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++ +|+||||||+.......                +.+.++|++++++|+.+++++.+.+.|.|++++.++||++||..
T Consensus       286 g~~id~lV~nAGv~~~~~~~----------------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a  349 (454)
T 3u0b_A          286 GGKVDILVNNAGITRDKLLA----------------NMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMA  349 (454)
T ss_dssp             TTCCSEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHH
T ss_pred             CCCceEEEECCcccCCCccc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChH
Confidence            86 99999999987654433                33899999999999999999999999999988889999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+++++|+++++.|+  .+|+||
T Consensus       350 ~~~g~-------------------------------------------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn  386 (454)
T 3u0b_A          350 GIAGN-------------------------------------------RGQTNYATTKAGMIGLAEALAPVLADKGITIN  386 (454)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred             hCCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            87654                                           567899999999999999999998  589999


Q ss_pred             EeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|....+               ..+|+|+|+.++|+++......+|+.+..++..
T Consensus       387 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG~  450 (454)
T 3u0b_A          387 AVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQA  450 (454)
T ss_dssp             EEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSSB
T ss_pred             EEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCcc
Confidence            9999999999976531               238999999999999988899999999998864

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2.3e-36  Score=260.67  Aligned_cols=218  Identities=24%  Similarity=0.256  Sum_probs=184.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||+||||++++++|+++|++|++++|+++++++..+++.     ...++.+|++|.++++++++    .
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALG----S   73 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHT----T
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-----CCCEEEEeCCCHHHHHHHHH----H
Confidence            56899999999999999999999999999999999999877665554432     35667999999999888876    5


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~  160 (290)
                      ++++|+||||||.....+..                +.+.++|++.+++|+.+++++++++.|.|++++ .++||++||.
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~  137 (244)
T 3d3w_A           74 VGPVDLLVNNAAVALLQPFL----------------EVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ  137 (244)
T ss_dssp             CCCCCEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             cCCCCEEEECCccCCCcchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCch
Confidence            68999999999986543322                237899999999999999999999999998765 6899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||++++.++++++.|+  .+++|
T Consensus       138 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v  174 (244)
T 3d3w_A          138 CSQRAV-------------------------------------------TNHSVYCSTKGALDMLTKVMALELGPHKIRV  174 (244)
T ss_dssp             GGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            876543                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++....                 ...+|+|+|+.+++++.......+|+.+..++.
T Consensus       175 ~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          175 NAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             EEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            9999999999975410                 135899999999999987767789998887765

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=9.6e-37  Score=264.88  Aligned_cols=212  Identities=18%  Similarity=0.086  Sum_probs=181.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.++|++|||||++|||+++|++|+++|++|++++|+..+..             -..+.+|++|.++++++++++.+++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~d~~d~~~v~~~~~~~~~~~   85 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-------------DHSFTIKDSGEEEIKSVIEKINSKS   85 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-------------SEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-------------ccceEEEeCCHHHHHHHHHHHHHHc
Confidence            345899999999999999999999999999999999976532             2357899999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+||||||+....+..               .+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+
T Consensus        86 g~iD~li~~Ag~~~~~~~~---------------~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~  148 (251)
T 3orf_A           86 IKVDTFVCAAGGWSGGNAS---------------SDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAA  148 (251)
T ss_dssp             CCEEEEEECCCCCCCBCTT---------------STTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGG
T ss_pred             CCCCEEEECCccCCCCCcc---------------cccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhh
Confidence            9999999999987544311               12378999999999999999999999999975  589999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCI  238 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~v  238 (290)
                      ..+.                                           ++...|++||+|++.++++++.|+    .+|+|
T Consensus       149 ~~~~-------------------------------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v  185 (251)
T 3orf_A          149 LNRT-------------------------------------------SGMIAYGATKAATHHIIKDLASENGGLPAGSTS  185 (251)
T ss_dssp             GSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEE
T ss_pred             ccCC-------------------------------------------CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEE
Confidence            7654                                           567899999999999999999995    48999


Q ss_pred             EEeecceeecCcccCC-------CCCChhhhccchhhhhhc-cCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++.+..       ...+|+|+|+.+++++.. .....+|+.+.....
T Consensus       186 ~~v~PG~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v~~g  242 (251)
T 3orf_A          186 LGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKFETK  242 (251)
T ss_dssp             EEEEESCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEEEEE
T ss_pred             EEEecCcCcCcchhhhcccccccccCCHHHHHHHHHHHhcCccccCCcceEEEEecC
Confidence            9999999999986542       236899999999999998 667789998876543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-35  Score=260.05  Aligned_cols=224  Identities=25%  Similarity=0.283  Sum_probs=191.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|++|||||+||||++++++|+++|++|++++| +.+..++..+++...+ .++.++.+|++|.++++++++++.+
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 6666666666665543 4688999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||.....+..                +.+.++|++++++|+.+++++++++++.|++  +++||++||.
T Consensus        96 ~~~~~d~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~  157 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWCDEL----------------EVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSI  157 (274)
T ss_dssp             HHSCEEEEECCCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCG
T ss_pred             HcCCCCEEEECCCCCCCcccc----------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCEEEEEcCh
Confidence            999999999999986543322                2388999999999999999999999999983  3899999999


Q ss_pred             CCc-ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LGK-LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      .+. .+.                                           ++...|++||++++.+++.++.++  .+++
T Consensus       158 ~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~  194 (274)
T 1ja9_A          158 AAVMTGI-------------------------------------------PNHALYAGSKAAVEGFCRAFAVDCGAKGVT  194 (274)
T ss_dssp             GGTCCSC-------------------------------------------CSCHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             HhccCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            876 332                                           456889999999999999999998  5899


Q ss_pred             EEEeecceeecCccc------------CC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTY------------NA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~------------~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++.|+||++.|++..            ..                ...+|+|+|+.+++++..+....+|+.+..++.
T Consensus       195 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          195 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             EEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            999999999998754            11                134899999999999987777788998887764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.8e-36  Score=292.54  Aligned_cols=221  Identities=22%  Similarity=0.238  Sum_probs=176.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEec---------CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTAR---------DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIH   72 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~   72 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|         +...+++..+++...+..    +.+|+++.++++
T Consensus        15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~D~~d~~~~~   90 (613)
T 3oml_A           15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE----AVADYNSVIDGA   90 (613)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC----EEECCCCGGGHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe----EEEEeCCHHHHH
Confidence            4688999999999999999999999999999999988         777778888888766543    348999999999


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC
Q 039097           73 SVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA  152 (290)
Q Consensus        73 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~  152 (290)
                      ++++++.+.++++|+||||||+....+..+                .+.++|++++++|+.|+++++++++|+|++++.|
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g  154 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDRSLVK----------------TSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG  154 (613)
T ss_dssp             HHHC----------CEECCCCCCCCCCSTT----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCCCccc----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            999999999999999999999876544433                3899999999999999999999999999998889


Q ss_pred             eEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh
Q 039097          153 RIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK  232 (290)
Q Consensus       153 ~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e  232 (290)
                      +||++||..+..+.                                           ++...|++||+|+++|+++|+.|
T Consensus       155 ~IV~isS~a~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~e  191 (613)
T 3oml_A          155 RIIMTSSNSGIYGN-------------------------------------------FGQVNYTAAKMGLIGLANTVAIE  191 (613)
T ss_dssp             EEEEECCHHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCHHHcCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHH
Confidence            99999999887654                                           56789999999999999999999


Q ss_pred             C--CCeEEEEeecceeecCcccCC------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          233 Y--PNFCINCVCPGYVKTEMTYNA------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       233 ~--~~i~vn~v~PG~v~T~~~~~~------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +  .+|+||+|+||++ |+|....      ...+||++|+.++++++.. ...+|+++..++.
T Consensus       192 ~~~~gI~vn~v~Pg~~-t~~~~~~~~~~~~~~~~pedvA~~v~~L~s~~-~~~tG~~i~vdGG  252 (613)
T 3oml_A          192 GARNNVLCNVIVPTAA-SRMTEGILPDILFNELKPKLIAPVVAYLCHES-CEDNGSYIESAAG  252 (613)
T ss_dssp             HGGGTEEEEEEEEC-------CCCCCHHHHTTCCGGGTHHHHHHTTSTT-CCCCSCEEEEETT
T ss_pred             hCccCeEEEEEECCCC-ChhhhhccchhhhhcCCHHHHHHHHHHhcCCC-cCCCceEEEECCC
Confidence            9  4899999999975 6665543      2468999999999999987 6789999887764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-36  Score=256.92  Aligned_cols=218  Identities=24%  Similarity=0.254  Sum_probs=184.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++|++|||||+||||++++++|+++|++|++++|++++.++..+++     ..+.++.+|++|.++++++++    .
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~----~   73 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----PGIEPVCVDLGDWDATEKALG----G   73 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----TTCEEEECCTTCHHHHHHHHT----T
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCCcEEecCCCHHHHHHHHH----H
Confidence            4689999999999999999999999999999999999987666554432     135667999999999988877    5


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~  160 (290)
                      ++++|+||||||.....+..                +.+.++|++++++|+.+++++++.+.|.|++++ .++||++||.
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~  137 (244)
T 1cyd_A           74 IGPVDLLVNNAALVIMQPFL----------------EVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM  137 (244)
T ss_dssp             CCCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             cCCCCEEEECCcccCCCCcc----------------cCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcch
Confidence            68899999999986543322                238899999999999999999999999998766 6899999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||++++.++++++.++  .++++
T Consensus       138 ~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v  174 (244)
T 1cyd_A          138 VAHVTF-------------------------------------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRV  174 (244)
T ss_dssp             GGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhcCCC-------------------------------------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            876543                                           456899999999999999999998  48999


Q ss_pred             EEeecceeecCcccC-----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYN-----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~-----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++|+||++.|++...                 ....+|+|+|+.+++++..+....+|+.+..++.
T Consensus       175 ~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          175 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  240 (244)
T ss_dssp             EEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             EEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence            999999999997431                 1235899999999999988777789998887764

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2e-36  Score=271.72  Aligned_cols=225  Identities=16%  Similarity=0.212  Sum_probs=157.7

Q ss_pred             cCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCc-----------ccHH-----------HHHHHHHhcCCC--
Q 039097            3 ETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDE-----------KGGL-----------EAVEKLKHSGFD--   56 (290)
Q Consensus         3 ~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~-----------~~~~-----------~~~~~l~~~~~~--   56 (290)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|++           ++++           +..+++...+..  
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV   85 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence            378999999999  89999999999999999999998752           1111           122223222110  


Q ss_pred             cEEEEEee------------CCC--------HHHHHHHHHHHHhhcCCccEEEEccccCC--CCCCCCcccchhhhcccc
Q 039097           57 NVIFHQLD------------VAD--------PAAIHSVADFIRSHFGKLDILVNNAGITG--ISSDADTLSGFIEEGVAR  114 (290)
Q Consensus        57 ~~~~~~~D------------l~~--------~~~v~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~  114 (290)
                      ...++.+|            +++        .++++++++++.++++++|+||||||+..  ..+.              
T Consensus        86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~--------------  151 (319)
T 2ptg_A           86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPL--------------  151 (319)
T ss_dssp             CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCG--------------
T ss_pred             ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCcc--------------
Confidence            12334333            343        45899999999999999999999999753  1222              


Q ss_pred             cccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHH
Q 039097          115 GKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQY  194 (290)
Q Consensus       115 ~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (290)
                        .+.+.++|++++++|+.++++++++++|+|++  +|+||++||..+..+.                            
T Consensus       152 --~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~----------------------------  199 (319)
T 2ptg_A          152 --LQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVI----------------------------  199 (319)
T ss_dssp             --GGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC---------------------------------
T ss_pred             --ccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhc--CceEEEEecccccccc----------------------------
Confidence              23489999999999999999999999999975  3899999999886643                            


Q ss_pred             HhhhcCCCCCCCCCCCCc-hhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccCC----------------
Q 039097          195 LNDYKEGSPETKGWPANA-AAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYNA----------------  254 (290)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~-~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~~----------------  254 (290)
                                     ++. ..|++||+|+++|+++|+.|+ +  +|+||+|+||+|+|+|.+..                
T Consensus       200 ---------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  264 (319)
T 2ptg_A          200 ---------------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYS  264 (319)
T ss_dssp             ----------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----------------------
T ss_pred             ---------------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHH
Confidence                           334 589999999999999999997 3  89999999999999985431                


Q ss_pred             -------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          255 -------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       255 -------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                             ...+||++|+.++|+++......+|+++..++..
T Consensus       265 ~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~  305 (319)
T 2ptg_A          265 EANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL  305 (319)
T ss_dssp             --------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             hccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence                   1248999999999999988888999999988763

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4.7e-36  Score=270.35  Aligned_cols=209  Identities=22%  Similarity=0.203  Sum_probs=170.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHh-----cCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKH-----SGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~-----~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ++|++|||||++|||+++|++|+++|++|++++|+..+.++..+.+..     ..+.++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999999888876554433333322     123468999999999999999999883


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                        ++++|+||||||+....+..                +.+.++|++++++|+.++++++++++|+|+++..++||++||
T Consensus        81 --~g~iD~lVnnAG~~~~~~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS  142 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLGPLE----------------ALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS  142 (327)
T ss_dssp             --TSCCSEEEECCCCCCCSCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred             --cCCCCEEEECCCcCCCCchh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECC
Confidence              58999999999986443322                238899999999999999999999999998777899999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           +....|++||+++++++++++.|+  .+|+
T Consensus       143 ~~~~~~~-------------------------------------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~  179 (327)
T 1jtv_A          143 VGGLMGL-------------------------------------------PFNDVYCASKFALEGLCESLAVLLLPFGVH  179 (327)
T ss_dssp             GGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             cccccCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            9887653                                           456899999999999999999998  4899


Q ss_pred             EEEeecceeecCcccCCC--------------------------------CCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYNAG--------------------------------RLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~~--------------------------------~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||+|+||+|.|+|.....                                ..+||++|+.+++++..++
T Consensus       180 v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~l~~~~~  248 (327)
T 1jtv_A          180 LSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK  248 (327)
T ss_dssp             EEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             EEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHcCCC
Confidence            999999999999965421                                1489999999999988654

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=3.2e-36  Score=270.00  Aligned_cols=223  Identities=18%  Similarity=0.196  Sum_probs=177.4

Q ss_pred             cCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCcc-----------cHHHHHHHHHhcCC--CcEEEEEe----
Q 039097            3 ETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEK-----------GGLEAVEKLKHSGF--DNVIFHQL----   63 (290)
Q Consensus         3 ~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~~-----------~~~~~~~~l~~~~~--~~~~~~~~----   63 (290)
                      ++++|++|||||  ++|||+++|++|+++|++|++++|++.           ++++. +++.. +.  ..+.++.+    
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPD-GSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTT-SCBCCCSCEEECCTTC
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhc-cccccccccccccccc
Confidence            478999999999  899999999999999999999998641           11111 12211 11  01234444    


Q ss_pred             --------eCCC--------HHHHHHHHHHHHhhcCCccEEEEccccCC--CCCCCCcccchhhhcccccccccChHHHH
Q 039097           64 --------DVAD--------PAAIHSVADFIRSHFGKLDILVNNAGITG--ISSDADTLSGFIEEGVARGKMTQTYESAE  125 (290)
Q Consensus        64 --------Dl~~--------~~~v~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (290)
                              |++|        .++++++++++.++++++|+||||||+..  ..+.                .+.+.++|+
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~----------------~~~~~~~~~  147 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPL----------------LETSRKGYL  147 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCG----------------GGCCHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCc----------------ccCCHHHHH
Confidence                    3443        66899999999999999999999999753  1222                234899999


Q ss_pred             HhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCC
Q 039097          126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPET  205 (290)
Q Consensus       126 ~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (290)
                      +++++|+.++++++++++|+|++  +|+||++||..+..+.                                       
T Consensus       148 ~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~---------------------------------------  186 (315)
T 2o2s_A          148 AASSNSAYSFVSLLQHFGPIMNE--GGSAVTLSYLAAERVV---------------------------------------  186 (315)
T ss_dssp             HHHHHHTHHHHHHHHHHSTTEEE--EEEEEEEEEGGGTSCC---------------------------------------
T ss_pred             HHHhhhhHHHHHHHHHHHHHHhc--CCEEEEEecccccccC---------------------------------------
Confidence            99999999999999999999975  3899999999876643                                       


Q ss_pred             CCCCCCc-hhhhhhHHHHHHHHHHHHhhC---CCeEEEEeecceeecCcccCC-----------------------CCCC
Q 039097          206 KGWPANA-AAYILSKAAMNAYTRILAKKY---PNFCINCVCPGYVKTEMTYNA-----------------------GRLT  258 (290)
Q Consensus       206 ~~~~~~~-~~Y~~sKaa~~~~~~~la~e~---~~i~vn~v~PG~v~T~~~~~~-----------------------~~~~  258 (290)
                          ++. ..|++||+|+++|+++|+.|+   .+|+||+|+||+|+|++....                       +..+
T Consensus       187 ----~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  262 (315)
T 2o2s_A          187 ----PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNAPLRRDLH  262 (315)
T ss_dssp             ----TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHSSSCCCCC
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccCCCCCCCC
Confidence                333 589999999999999999997   389999999999999974321                       1358


Q ss_pred             hhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          259 VEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       259 ~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||++|+.++|++++.....+|+++..++..
T Consensus       263 pedvA~~v~~L~s~~~~~itG~~i~vdGG~  292 (315)
T 2o2s_A          263 SDDVGGAALFLLSPLARAVSGVTLYVDNGL  292 (315)
T ss_dssp             HHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence            999999999999988888999999988763

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=2.4e-35  Score=260.68  Aligned_cols=210  Identities=27%  Similarity=0.303  Sum_probs=181.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|++|||||+||||+++|++|+++|++|++++|+++++++..+++...+..++.++.+|++|.++++++++++.+.+
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999999888887777766655578999999999999999999999999


Q ss_pred             CCccEEEEc-cccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNN-AGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~-Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++|+|||| ||.... +..                +.+.+++++++++|+.++++++++++|.|++. .++||++||..
T Consensus       105 g~iD~li~naag~~~~-~~~----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~  166 (286)
T 1xu9_A          105 GGLDMLILNHITNTSL-NLF----------------HDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLA  166 (286)
T ss_dssp             TSCSEEEECCCCCCCC-CCC----------------CSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGG
T ss_pred             CCCCEEEECCccCCCC-ccc----------------cCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcc
Confidence            999999999 565422 211                23789999999999999999999999998765 48999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~  237 (290)
                      +..+.                                           ++...|++||++++.++++++.|+    .+++
T Consensus       167 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~  203 (286)
T 1xu9_A          167 GKVAY-------------------------------------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVS  203 (286)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCE
T ss_pred             cccCC-------------------------------------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeE
Confidence            76653                                           456899999999999999999987    4899


Q ss_pred             EEEeecceeecCcccC-------CCCCChhhhccchhhhhhcc
Q 039097          238 INCVCPGYVKTEMTYN-------AGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~-------~~~~~~e~~a~~~~~l~~~~  273 (290)
                      |++|+||+++|++...       ....+||++|+.++..+...
T Consensus       204 v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          204 ITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             EEEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHTT
T ss_pred             EEEeecCccCChhHHHhccccccCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999998532       24579999999999877644

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.5e-35  Score=271.79  Aligned_cols=227  Identities=16%  Similarity=0.049  Sum_probs=175.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCcccHHH------------HHHHHHhcCCCcEEEEEeeCCCHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLAL-NGIITVLTARDEKGGLE------------AVEKLKHSGFDNVIFHQLDVADPAAI   71 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~Dl~~~~~v   71 (290)
                      .+|++|||||++|||+++|++|++ +|++|++++|+.+..++            ..+.+... +.++..+.+|++|.+++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CCcEEEEEecCCCHHHH
Confidence            489999999999999999999999 99999999998665432            22344443 34688999999999999


Q ss_pred             HHHHHHHHhhc-CCccEEEEccccC-------------CCCCCCCcccchh---h-hccc-ccccccChHHHHHhhhccc
Q 039097           72 HSVADFIRSHF-GKLDILVNNAGIT-------------GISSDADTLSGFI---E-EGVA-RGKMTQTYESAEKCLQTNY  132 (290)
Q Consensus        72 ~~~~~~~~~~~-~~id~li~~Ag~~-------------~~~~~~~~~~~~~---~-~~~~-~~~~~~~~~~~~~~~~vNv  132 (290)
                      +++++++.+++ |+||+||||||..             ...+..+.+.+..   . ..+. ....+.+.++|++++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 9999999999972             1111110000000   0 0000 0112458999999999999


Q ss_pred             chHH-HHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCC
Q 039097          133 LGAK-RMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPAN  211 (290)
Q Consensus       133 ~~~~-~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      .+.+ .+++.+.+.+....+|+||++||..+..+.                                           +.
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~-------------------------------------------p~  255 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITW-------------------------------------------PI  255 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH-------------------------------------------HH
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC-------------------------------------------CC
Confidence            9997 778877654332346899999999987654                                           33


Q ss_pred             c--hhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecceeecCcccCCC---------------CCChhhhccchhhhhhc
Q 039097          212 A--AAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALL  272 (290)
Q Consensus       212 ~--~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~  272 (290)
                      .  ..|++||+|+.+|+|+||.|+  .|||||+|+||+|.|++....+               .-+||++++.+.+|+++
T Consensus       256 ~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd  335 (422)
T 3s8m_A          256 YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRE  335 (422)
T ss_dssp             HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcc
Confidence            3  789999999999999999999  4899999999999999987653               24789999999999998


Q ss_pred             cCC
Q 039097          273 HKG  275 (290)
Q Consensus       273 ~~~  275 (290)
                      ..+
T Consensus       336 ~ly  338 (422)
T 3s8m_A          336 RLY  338 (422)
T ss_dssp             TTT
T ss_pred             hhh
Confidence            653

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-35  Score=257.26  Aligned_cols=210  Identities=20%  Similarity=0.240  Sum_probs=176.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++|++|||||++|||+++|++|+++|++|++++|+++.    .+++   +  .+.++ +|+  .++++++++++    
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~---~--~~~~~-~D~--~~~~~~~~~~~----   79 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRS---G--HRYVV-CDL--RKDLDLLFEKV----   79 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHT---C--SEEEE-CCT--TTCHHHHHHHS----
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhh---C--CeEEE-eeH--HHHHHHHHHHh----
Confidence            5789999999999999999999999999999999998632    2222   1  46677 999  55677777654    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      .++|+||||||+....+..                +.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+
T Consensus        80 ~~iD~lv~~Ag~~~~~~~~----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~  143 (249)
T 1o5i_A           80 KEVDILVLNAGGPKAGFFD----------------ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV  143 (249)
T ss_dssp             CCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             cCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHh
Confidence            3899999999976443322                338899999999999999999999999998877799999999987


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++...|++||+++++++++++.|+  .+|+||+
T Consensus       144 ~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  180 (249)
T 1o5i_A          144 ISPI-------------------------------------------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNC  180 (249)
T ss_dssp             TSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cCCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            7643                                           456899999999999999999998  4899999


Q ss_pred             eecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||++.|++....                ...+|||+|+.++++++......+|+++..++.
T Consensus       181 v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          181 VAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             EEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            99999999975321                134899999999999998777899999988875

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=2.4e-35  Score=268.15  Aligned_cols=225  Identities=12%  Similarity=-0.041  Sum_probs=175.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCcccHH-----------HH-HHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLAL-NGIITVLTARDEKGGL-----------EA-VEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~r~~~~~~-----------~~-~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      ..+|++|||||++|||+++|++|++ +|++|++++|+.+..+           +. .+.+... +.++..+.+|++|+++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTSHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CCceEEEECCCCCHHH
Confidence            4589999999999999999999999 9999999998765432           12 2233333 3468899999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCC-------------CCCCCcccchh-----hhcccccccccChHHHHHhhhccc
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGI-------------SSDADTLSGFI-----EEGVARGKMTQTYESAEKCLQTNY  132 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~-------------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~vNv  132 (290)
                      ++++++++.+++|++|+||||||....             .+..+.+.+-.     ..-......+.+.++|++++++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            999999999999999999999997411             11100000000     000000124569999999999999


Q ss_pred             chHH-HHHHHhch-hhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCC
Q 039097          133 LGAK-RMCEALIP-LLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPA  210 (290)
Q Consensus       133 ~~~~-~l~~~~~~-~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (290)
                      .+.+ .+++.+.+ .|++ .+|+||++||..+..+.                                           +
T Consensus       204 ~~~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~-------------------------------------------p  239 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITH-------------------------------------------D  239 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGT-------------------------------------------T
T ss_pred             hhHHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcC-------------------------------------------C
Confidence            9998 77777664 4554 45899999999987654                                           4


Q ss_pred             Cc--hhhhhhHHHHHHHHHHHHhhC--C-CeEEEEeecceeecCcccCCC---------------CCChhhhccchhhhh
Q 039097          211 NA--AAYILSKAAMNAYTRILAKKY--P-NFCINCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLA  270 (290)
Q Consensus       211 ~~--~~Y~~sKaa~~~~~~~la~e~--~-~i~vn~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~  270 (290)
                      ..  ..|++||+|+++++|+||.|+  . |||||+|+||++.|++....+               .-+||++++.+.+|+
T Consensus       240 ~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~  319 (405)
T 3zu3_A          240 IYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLY  319 (405)
T ss_dssp             TTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence            44  899999999999999999999  5 899999999999999977653               238899999999999


Q ss_pred             hcc
Q 039097          271 LLH  273 (290)
Q Consensus       271 ~~~  273 (290)
                      ++.
T Consensus       320 sd~  322 (405)
T 3zu3_A          320 KDS  322 (405)
T ss_dssp             HHT
T ss_pred             hcc
Confidence            973

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.3e-35  Score=263.72  Aligned_cols=223  Identities=16%  Similarity=0.218  Sum_probs=176.9

Q ss_pred             cCCCcEEEEecCC--CchhHHHHHHHHHCCCeEEEEecCcc-----------cHHHHHHHHHhcCC-CcEEEEEee----
Q 039097            3 ETAKRYAVVTGAN--KGIGYEVVRQLALNGIITVLTARDEK-----------GGLEAVEKLKHSGF-DNVIFHQLD----   64 (290)
Q Consensus         3 ~~~~k~~lITGgs--~gIG~aia~~L~~~g~~Vi~~~r~~~-----------~~~~~~~~l~~~~~-~~~~~~~~D----   64 (290)
                      ++++|++|||||+  +|||+++|++|+++|++|++++|++.           ++++. +++..... .....+.+|    
T Consensus         5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCC
T ss_pred             ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceecc
Confidence            5889999999999  99999999999999999999987631           11111 11111000 112334443    


Q ss_pred             ----C----CC--------HHHHHHHHHHHHhhcCCccEEEEccccCC--CCCCCCcccchhhhcccccccccChHHHHH
Q 039097           65 ----V----AD--------PAAIHSVADFIRSHFGKLDILVNNAGITG--ISSDADTLSGFIEEGVARGKMTQTYESAEK  126 (290)
Q Consensus        65 ----l----~~--------~~~v~~~~~~~~~~~~~id~li~~Ag~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (290)
                          +    +|        +++++++++++.++++++|+||||||+..  ..+.                .+.+.++|++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~----------------~~~~~~~~~~  147 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPL----------------LETSRKGYLA  147 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCG----------------GGCCHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCc----------------ccCCHHHHHH
Confidence                2    22        67899999999999999999999999753  1221                2348999999


Q ss_pred             hhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCC
Q 039097          127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETK  206 (290)
Q Consensus       127 ~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (290)
                      ++++|+.++++++++++|+|++  +|+||++||..+..+.                                        
T Consensus       148 ~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~----------------------------------------  185 (297)
T 1d7o_A          148 AISASSYSFVSLLSHFLPIMNP--GGASISLTYIASERII----------------------------------------  185 (297)
T ss_dssp             HHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCC----------------------------------------
T ss_pred             HHHHhhhHHHHHHHHHHHHhcc--CceEEEEeccccccCC----------------------------------------
Confidence            9999999999999999999975  4899999999876643                                        


Q ss_pred             CCCCCc-hhhhhhHHHHHHHHHHHHhhC---CCeEEEEeecceeecCcccCC-----------------CCCChhhhccc
Q 039097          207 GWPANA-AAYILSKAAMNAYTRILAKKY---PNFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAES  265 (290)
Q Consensus       207 ~~~~~~-~~Y~~sKaa~~~~~~~la~e~---~~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~  265 (290)
                         ++. ..|++||+|+++|+++++.|+   .+|+||+|+||++.|++.+..                 ...+|||+|+.
T Consensus       186 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~  262 (297)
T 1d7o_A          186 ---PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNA  262 (297)
T ss_dssp             ---TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHH
T ss_pred             ---CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHHHhhccCCCCCCCCHHHHHHH
Confidence               344 589999999999999999997   389999999999999986542                 13589999999


Q ss_pred             hhhhhhccCCCCceeEeecCcc
Q 039097          266 PVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       266 ~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +++++++.....+|+++..++.
T Consensus       263 v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          263 AAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             HHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHhCccccCCCCCEEEECCC
Confidence            9999998778899999988875

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=1.4e-36  Score=262.65  Aligned_cols=205  Identities=20%  Similarity=0.215  Sum_probs=151.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||++|||+++|++|++ |++|++++|+++.+++..+ +     ..+.++.+|+++..+ .+.+.+..++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~-----~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-I-----EGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-S-----TTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-h-----cCCcceecccchHHH-HHHHHHHHHh
Confidence            367899999999999999999999987 9999999999776655433 1     358899999999877 5555555667


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+                .+.++|++++++|+.+++++++.++|.|+++. |+||++||..
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~----------------~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~  135 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEA----------------GSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGA  135 (245)
T ss_dssp             CSCCSEEEECC--------------------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---
T ss_pred             cCCCCEEEECCCcCCCCchhh----------------CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcc
Confidence            889999999999875544332                38899999999999999999999999998765 8999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|++||+|+++++++++.|+  .+|+||
T Consensus       136 ~~~~~-------------------------------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  172 (245)
T 3e9n_A          136 GNGPH-------------------------------------------PGNTIYAASKHALRGLADAFRKEEANNGIRVS  172 (245)
T ss_dssp             --------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             cccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            87654                                           556899999999999999999998  489999


Q ss_pred             EeecceeecCcccCC-----------CCCChhhhccchhhhhhccC
Q 039097          240 CVCPGYVKTEMTYNA-----------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +|+||++.|++.+..           ...+|+|+|+.+++++..+.
T Consensus       173 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          173 TVSPGPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             EEEECCC----------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             EEecCCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHHHcCCC
Confidence            999999999987653           24689999999999998665

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-34  Score=246.24  Aligned_cols=212  Identities=21%  Similarity=0.163  Sum_probs=177.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|++|||||+||||++++++|+++|++|++++|++. .            ..+.++.+|++|.++++++++++ +++++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            3789999999999999999999999999999999865 1            13578999999999999999999 88899


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---C---CeEEEEc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---S---ARIVNVS  158 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~---~~iV~is  158 (290)
                      +|++|||||.....+..+.            ..+.+.++|++.+++|+.+++++++++++.|+++.   .   ++||++|
T Consensus        67 ~d~li~~ag~~~~~~~~~~------------~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~s  134 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGK------------EGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTA  134 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCS------------SSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEEC
T ss_pred             ceEEEEcccccCccccccc------------ccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeC
Confidence            9999999998754333221            01125569999999999999999999999998764   3   3999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||++++.++++++.|+  .+|
T Consensus       135 S~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi  171 (242)
T 1uay_A          135 SVAAFEGQ-------------------------------------------IGQAAYAASKGGVVALTLPAARELAGWGI  171 (242)
T ss_dssp             CTHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             ChhhccCC-------------------------------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCc
Confidence            99776543                                           456899999999999999999998  489


Q ss_pred             EEEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|++|+||++.|++....                ...+|+|+|+.+++++..  ...+|+.+..++.
T Consensus       172 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gG  236 (242)
T 1uay_A          172 RVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGA  236 (242)
T ss_dssp             EEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTT
T ss_pred             EEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--CCCCCcEEEEcCC
Confidence            999999999999975432                124899999999999986  5688998887765

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=2.6e-35  Score=255.97  Aligned_cols=226  Identities=19%  Similarity=0.160  Sum_probs=164.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||++|||+++|++|+++|++|++++|++++.+.             . +.+|+++.++++++++++   .+++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~-~~~Dl~~~~~v~~~~~~~---~~~id   64 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------D-LSTAEGRKQAIADVLAKC---SKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------C-TTSHHHHHHHHHHHHTTC---TTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------c-cccCCCCHHHHHHHHHHh---CCCCC
Confidence            689999999999999999999999999999998765321             1 679999999998888743   37999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +||||||+...                       .+.|++++++|+.++++++++++|.|++++.++||++||..+....
T Consensus        65 ~lv~~Ag~~~~-----------------------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~  121 (257)
T 1fjh_A           65 GLVLCAGLGPQ-----------------------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLA  121 (257)
T ss_dssp             EEEECCCCCTT-----------------------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSC
T ss_pred             EEEECCCCCCC-----------------------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccc
Confidence            99999997521                       2338999999999999999999999998877999999999876321


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                      .......      ..+...+..... ...... .+       .++...|++||++++.++++++.++  .+|+||+|+||
T Consensus       122 ~~~~~~~------~~~~~~~~~~~~-~~~~~~-~~-------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG  186 (257)
T 1fjh_A          122 FDKNPLA------LALEAGEEAKAR-AIVEHA-GE-------QGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPG  186 (257)
T ss_dssp             GGGCTTH------HHHHHTCHHHHH-HHHHTC-CT-------THHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEEC
T ss_pred             cccchhh------hhhcccchhhhh-hhhhcc-cC-------CCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeC
Confidence            1000000      000000000000 000000 00       1356899999999999999999998  58999999999


Q ss_pred             eeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          245 YVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++.|++.+..                  ...+|+++|+.+++++..+....+|+++..++.
T Consensus       187 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          187 ATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             C---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCCccchhhccchhHHHHHHhcccccCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence            9999986532                  135899999999999998877899999988775

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=2.1e-33  Score=259.08  Aligned_cols=238  Identities=13%  Similarity=0.049  Sum_probs=181.4

Q ss_pred             CCCcEEEEecCCCchhHH--HHHHHHHCCCeEEEEecCcccH-----------HHHHHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            4 TAKRYAVVTGANKGIGYE--VVRQLALNGIITVLTARDEKGG-----------LEAVEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~a--ia~~L~~~g~~Vi~~~r~~~~~-----------~~~~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      ..+|++|||||++|||++  +|++|+++|++|++++|+....           .+..+++....+.++..+.||++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            468999999999999999  9999999999999999976542           233333333344568999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCC-------------CCCCCCcccchh---hh--cccccccccChHHHHHhhhccc
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITG-------------ISSDADTLSGFI---EE--GVARGKMTQTYESAEKCLQTNY  132 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~-------------~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~vNv  132 (290)
                      ++++++++.+++|++|+||||||...             ..+..+.+.+..   ..  -......+.+.++|+.++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            99999999999999999999999741             111110000000   00  0000113458999999999999


Q ss_pred             chHH-HHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCC
Q 039097          133 LGAK-RMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPAN  211 (290)
Q Consensus       133 ~~~~-~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      .+.+ .+++.+.+.+....+++||++||..+..+.                                           +.
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~-------------------------------------------p~  254 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY-------------------------------------------KI  254 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT-------------------------------------------TT
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC-------------------------------------------Cc
Confidence            9998 777777664443456899999999887654                                           44


Q ss_pred             c--hhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccCCC---------------CCChhhhccchhhhhh
Q 039097          212 A--AAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLAL  271 (290)
Q Consensus       212 ~--~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~  271 (290)
                      +  ..|++||+|+++++++||.|+ +  |||||+|+||+|.|++....+               .-++|++++.+.++++
T Consensus       255 ~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~s  334 (418)
T 4eue_A          255 YREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFS  334 (418)
T ss_dssp             TTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhh
Confidence            4  899999999999999999999 4  799999999999999877653               2378999999999998


Q ss_pred             ccCCCCceeEeecCc
Q 039097          272 LHKGGPSGLFFSRKE  286 (290)
Q Consensus       272 ~~~~~~~g~~~~~~~  286 (290)
                      +.-  .+|..+..++
T Consensus       335 d~~--~~g~~~~~D~  347 (418)
T 4eue_A          335 EKI--YSNEKIQFDD  347 (418)
T ss_dssp             HTT--SSSSCCCCCT
T ss_pred             ccc--cCCCccccCC
Confidence            744  4566655444

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.98  E-value=8.6e-32  Score=225.55  Aligned_cols=190  Identities=16%  Similarity=0.167  Sum_probs=161.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+||||++++++|+ +|++|++++|++.                  .+.+|+++.++++++++++    +++|+
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------~~~~D~~~~~~~~~~~~~~----~~~d~   61 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------DVTVDITNIDSIKKMYEQV----GKVDA   61 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------SEECCTTCHHHHHHHHHHH----CCEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------ceeeecCCHHHHHHHHHHh----CCCCE
Confidence            79999999999999999999 9999999999864                  3789999999999998875    78999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      ||||||.....+..                +.+.++|++.+++|+.+++++++.+.+.|++  +++||++||..+..+. 
T Consensus        62 vi~~ag~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~-  122 (202)
T 3d7l_A           62 IVSATGSATFSPLT----------------ELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPI-  122 (202)
T ss_dssp             EEECCCCCCCCCGG----------------GCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCC-
T ss_pred             EEECCCCCCCCChh----------------hCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCC-
Confidence            99999976433322                2388999999999999999999999999874  3899999998776543 


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEeeccee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYV  246 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v~PG~v  246 (290)
                                                                ++...|+++|++++.+++.++.|+ .+++++.|+||++
T Consensus       123 ------------------------------------------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v  160 (202)
T 3d7l_A          123 ------------------------------------------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVL  160 (202)
T ss_dssp             ------------------------------------------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCB
T ss_pred             ------------------------------------------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCcc
Confidence                                                      456899999999999999999998 5899999999999


Q ss_pred             ecCccc------CCCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          247 KTEMTY------NAGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       247 ~T~~~~------~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      .|++..      .....+++|+|+.+++++.   ...+|+.+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~v  201 (202)
T 3d7l_A          161 EESWDKLEPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQV  201 (202)
T ss_dssp             GGGHHHHGGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEE
T ss_pred             CCchhhhhhhccccCCCCHHHHHHHHHHhhh---ccccCceEec
Confidence            999743      1345799999999887762   3577877654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=4.2e-32  Score=282.72  Aligned_cols=222  Identities=18%  Similarity=0.197  Sum_probs=183.2

Q ss_pred             CcCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKG-IGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         2 ~~~~~k~~lITGgs~g-IG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      ++++||++|||||++| ||+++|++|+++|++|+++ +|+.++.++..+++...   .+.++.++.||++|.++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4688999999999998 9999999999999999998 57777777776666432   24578999999999999999999


Q ss_pred             HHHhh-----cC-CccEEEEccccCCCC-CCCCcccchhhhcccccccccC--hHHHHHhhhcccchHHHHHHHh--chh
Q 039097           77 FIRSH-----FG-KLDILVNNAGITGIS-SDADTLSGFIEEGVARGKMTQT--YESAEKCLQTNYLGAKRMCEAL--IPL  145 (290)
Q Consensus        77 ~~~~~-----~~-~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vNv~~~~~l~~~~--~~~  145 (290)
                      ++.++     +| ++|+||||||+.... +..+                .+  .++|+++|++|+.+++.+++.+  +|.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d----------------~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~  814 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEH----------------IDSKSEFAHRIMLTNILRMMGCVKKQKSARG  814 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGG----------------CCHHHHHHHHHHTHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhh----------------CCcchHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            99998     66 999999999986543 3222                25  8999999999999999999998  899


Q ss_pred             hccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHH
Q 039097          146 LQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAY  225 (290)
Q Consensus       146 l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~  225 (290)
                      |++++.++||++||..+..+                                             +...|++||+|+++|
T Consensus       815 m~~~~~G~IVnISS~ag~~g---------------------------------------------g~~aYaASKAAL~~L  849 (1887)
T 2uv8_A          815 IETRPAQVILPMSPNHGTFG---------------------------------------------GDGMYSESKLSLETL  849 (1887)
T ss_dssp             CCSCCEEEEEEECSCTTCSS---------------------------------------------CBTTHHHHHHHGGGH
T ss_pred             hhhCCCCEEEEEcChHhccC---------------------------------------------CCchHHHHHHHHHHH
Confidence            98777789999999987653                                             347899999999999


Q ss_pred             -HHHHHhhC-CCeEEEEeecceee-cCcccCC------------CCCChhhhccchhhhhhcc-CCCCceeEeec
Q 039097          226 -TRILAKKY-PNFCINCVCPGYVK-TEMTYNA------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSR  284 (290)
Q Consensus       226 -~~~la~e~-~~i~vn~v~PG~v~-T~~~~~~------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~  284 (290)
                       ++.++.++ +.|+||+|+||+|. |+|....            ...+|+++|+.++++++.. ....+|+.+..
T Consensus       850 ttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~~~plr~~sPEEVA~avlfLaSd~~as~iTGq~I~V  924 (1887)
T 2uv8_A          850 FNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  924 (1887)
T ss_dssp             HHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHHTTSCCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEE
T ss_pred             HHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHHhcCCCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence             99999998 35999999999999 8875421            2348999999999999876 44567777654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=1.9e-32  Score=277.51  Aligned_cols=221  Identities=19%  Similarity=0.194  Sum_probs=184.1

Q ss_pred             cCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKG-IGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         3 ~~~~k~~lITGgs~g-IG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      ++++|++|||||++| ||+++|++|+++|++|+++ +|+.+++++..+++....   +.++.++.||++|.+++++++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~  552 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF  552 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence            578999999999998 9999999999999999998 677777777777764332   34789999999999999999999


Q ss_pred             HHhh-----cC-CccEEEEccccCCCC-CCCCcccchhhhcccccccccC--hHHHHHhhhcccchHHHHHHHh--chhh
Q 039097           78 IRSH-----FG-KLDILVNNAGITGIS-SDADTLSGFIEEGVARGKMTQT--YESAEKCLQTNYLGAKRMCEAL--IPLL  146 (290)
Q Consensus        78 ~~~~-----~~-~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vNv~~~~~l~~~~--~~~l  146 (290)
                      +.++     ++ ++|+||||||+.... +..+                .+  .++|++++++|+.+++.+++.+  .|.|
T Consensus       553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~d----------------lt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M  616 (1688)
T 2pff_A          553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEH----------------IDSKSEFAHRIMLTNILRMMGCVKKQKSARGI  616 (1688)
T ss_dssp             HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSS----------------CTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHhccccccCCCCeEEEECCCcCCCCCChhh----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence            9998     77 999999999986543 3322                25  8999999999999999999998  8888


Q ss_pred             ccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHH-
Q 039097          147 QLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAY-  225 (290)
Q Consensus       147 ~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~-  225 (290)
                      ++++.++||++||..+..+                                             +...|++||+|+++| 
T Consensus       617 ~krggGrIVnISSiAG~~G---------------------------------------------g~saYaASKAAL~aLt  651 (1688)
T 2pff_A          617 ETRPAQVILPMSPNHGTFG---------------------------------------------GDGMYSESKLSLETLF  651 (1688)
T ss_dssp             TTSCEEECCCCCSCTTTSS---------------------------------------------CBTTHHHHHHHHTHHH
T ss_pred             HhCCCCEEEEEEChHhccC---------------------------------------------CchHHHHHHHHHHHHH
Confidence            8777789999999987653                                             347899999999999 


Q ss_pred             HHHHHhhC-CCeEEEEeecceee-cCcccCC------------CCCChhhhccchhhhhhcc-CCCCceeEeec
Q 039097          226 TRILAKKY-PNFCINCVCPGYVK-TEMTYNA------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSR  284 (290)
Q Consensus       226 ~~~la~e~-~~i~vn~v~PG~v~-T~~~~~~------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~  284 (290)
                      ++.++.++ +.|+||+|+||++. |+|....            ...+||++|+.+++++++. ....+|+.+..
T Consensus       652 trsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~~~~l~~iplR~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V  725 (1688)
T 2pff_A          652 NRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIEKMGVRTFSQKEMAFNLLGLLTPEVVELCQKSPVMA  725 (1688)
T ss_dssp             HHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTCSTTTSSSSCCCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred             HHHHHHHcCCCeEEEEEEECcCcCCcccCCchHHHHHHHhCCCCCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence            78888888 45999999999999 7875421            2348999999999999866 34456766654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=2e-31  Score=223.87  Aligned_cols=193  Identities=23%  Similarity=0.213  Sum_probs=160.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||+||||++++++|+++  +|++++|++++.++..+++.     . .++.+|++|.+++++++++    ++++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~----~~~id   68 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEE----AGPLD   68 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHH----HCSEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHh----cCCCC
Confidence            58999999999999999999998  99999999877766665553     1 7889999999999999887    68999


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +||||||.....+..+                .+.++|++.+++|+.+++++++++    ++.+.++||++||..+..+.
T Consensus        69 ~vi~~ag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~  128 (207)
T 2yut_A           69 LLVHAVGKAGRASVRE----------------AGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQV  128 (207)
T ss_dssp             EEEECCCCCCCBCSCC-------------------CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSS
T ss_pred             EEEECCCcCCCCChhh----------------CCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCC
Confidence            9999999865443332                278899999999999999999999    33445899999998776543


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++...|+++|++++.+++.++.++  .+++++.++||
T Consensus       129 -------------------------------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg  165 (207)
T 2yut_A          129 -------------------------------------------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLP  165 (207)
T ss_dssp             -------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCC
T ss_pred             -------------------------------------------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecC
Confidence                                                       456899999999999999999998  58999999999


Q ss_pred             eeecCcccC-----CCCCChhhhccchhhhhhccC
Q 039097          245 YVKTEMTYN-----AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       245 ~v~T~~~~~-----~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++.|++...     ....+|+|+|+.+++++..+.
T Consensus       166 ~v~t~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          166 AVATGLWAPLGGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             CBCSGGGGGGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             cccCCCccccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            999998443     235799999999999987665

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=6.2e-31  Score=273.48  Aligned_cols=221  Identities=18%  Similarity=0.151  Sum_probs=182.0

Q ss_pred             cCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKG-IGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         3 ~~~~k~~lITGgs~g-IG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      +++||++|||||++| ||+++|++|+++|++|++++ |+...+.+..+++...   .+.++.++.||++|.+++++++++
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~  728 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY  728 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence            578999999999999 99999999999999999995 6666666666555322   245789999999999999999999


Q ss_pred             HHhh---cC-CccEEEEccccCCCC-CCCCcccchhhhcccccccccC--hHHHHHhhhcccchHHHHHHH--hchhhcc
Q 039097           78 IRSH---FG-KLDILVNNAGITGIS-SDADTLSGFIEEGVARGKMTQT--YESAEKCLQTNYLGAKRMCEA--LIPLLQL  148 (290)
Q Consensus        78 ~~~~---~~-~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vNv~~~~~l~~~--~~~~l~~  148 (290)
                      +.++   +| +||+||||||+.... +..+                .+  .++|++++++|+.+++++++.  +++.|++
T Consensus       729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d----------------~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~  792 (1878)
T 2uv9_A          729 IYDTKNGLGWDLDYVVPFAAIPENGREIDS----------------IDSKSELAHRIMLTNLLRLLGAIKTQKKERGYET  792 (1878)
T ss_dssp             HHCSSSSCCCCCSEEEECCCCCCTTCCTTC----------------CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCS
T ss_pred             HHHhhcccCCCCcEEEeCcccccCCCChhh----------------cCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh
Confidence            9998   99 999999999987543 3332                26  799999999999999999977  7788887


Q ss_pred             CCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          149 SDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       149 ~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                      ++.|+||++||..+..+                                             +...|++||+|+++|++.
T Consensus       793 ~~~G~IVnISS~ag~~g---------------------------------------------g~~aYaASKAAL~aLt~~  827 (1878)
T 2uv9_A          793 RPAQVILPLSPNHGTFG---------------------------------------------NDGLYSESKLALETLFNR  827 (1878)
T ss_dssp             CCEEECCEECSCSSSSS---------------------------------------------CCSSHHHHHHHHTTHHHH
T ss_pred             CCCCEEEEEcchhhccC---------------------------------------------CchHHHHHHHHHHHHHHH
Confidence            76789999999988763                                             246899999999999887


Q ss_pred             HHhh-C-CCeEEEEeecceee-cCcccC------------CCCCChhhhccchhhhhhccC-CCCceeEeec
Q 039097          229 LAKK-Y-PNFCINCVCPGYVK-TEMTYN------------AGRLTVEEGAESPVWLALLHK-GGPSGLFFSR  284 (290)
Q Consensus       229 la~e-~-~~i~vn~v~PG~v~-T~~~~~------------~~~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~  284 (290)
                      ++.+ + +.|+||+|+||++. |+|...            ....+|+++|+.++++++... ...+|+.+..
T Consensus       828 laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~~plr~~sPeEVA~avlfLaSd~a~s~iTGq~I~V  899 (1878)
T 2uv9_A          828 WYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEKLGVRTFSQQEMAFNLLGLMAPAIVNLCQSDPVFA  899 (1878)
T ss_dssp             HHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHTTTCCCBCHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred             HHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHhcCCCCCCHHHHHHHHHHHhCCcccccccCcEEEE
Confidence            6654 6 45999999999999 998543            134589999999999988664 4566766554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=7.7e-31  Score=249.86  Aligned_cols=207  Identities=15%  Similarity=0.056  Sum_probs=172.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEE-ecCc-------------ccHHHHHHHHHhcCCCcEEEEEeeCCCHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLT-ARDE-------------KGGLEAVEKLKHSGFDNVIFHQLDVADPA   69 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   69 (290)
                      .+|++|||||+||||+++|++|+++|++ |+++ +|+.             +..++..+++...+ .++.++.||++|.+
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG-ATATVVTCDLTDAE  328 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT-CEEEEEECCTTSHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC-CEEEEEECCCCCHH
Confidence            5799999999999999999999999997 7777 8883             44566677776554 46999999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      +++++++++. ++++||+||||||+....+..+                .+.++|++++++|+.|++++.+.+.+.++++
T Consensus       329 ~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~----------------~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~  391 (525)
T 3qp9_A          329 AAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAA----------------TDADALARVVTAKATAALHLDRLLREAAAAG  391 (525)
T ss_dssp             HHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTT----------------CCHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHH-hcCCCcEEEECCcCCCCCchhh----------------CCHHHHHHHHHHHHHHHHHHHHHhccccccC
Confidence            9999999998 7899999999999986554443                3899999999999999999999999999877


Q ss_pred             C-CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          150 D-SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       150 ~-~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                      + .++||++||..+..+.                                           ++...|+++|+++++|++.
T Consensus       392 ~~~~~iV~~SS~a~~~g~-------------------------------------------~g~~~YaaaKa~l~~lA~~  428 (525)
T 3qp9_A          392 GRPPVLVLFSSVAAIWGG-------------------------------------------AGQGAYAAGTAFLDALAGQ  428 (525)
T ss_dssp             -CCCEEEEEEEGGGTTCC-------------------------------------------TTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCHHHcCCC-------------------------------------------CCCHHHHHHHHHHHHHHHH
Confidence            6 6899999999988765                                           6779999999999998643


Q ss_pred             HHhhCCCeEEEEeecceeecCcccC-----------CCCCChhhhccchhhhhhccC
Q 039097          229 LAKKYPNFCINCVCPGYVKTEMTYN-----------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       229 la~e~~~i~vn~v~PG~v~T~~~~~-----------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++.  .++++++|+||++.|+|...           ...++|+++++.+.+++..+.
T Consensus       429 ~~~--~gi~v~sI~pG~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~~l~~~l~~~~  483 (525)
T 3qp9_A          429 HRA--DGPTVTSVAWSPWEGSRVTEGATGERLRRLGLRPLAPATALTALDTALGHGD  483 (525)
T ss_dssp             CCS--SCCEEEEEEECCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             HHh--CCCCEEEEECCccccccccchhhHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            322  48999999999999999733           235799999999999887665

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=2e-30  Score=224.16  Aligned_cols=224  Identities=21%  Similarity=0.138  Sum_probs=168.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||+||||++++++|+++|++|++++|++++.+.              .+.+|+++.++++++++++   .+++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------~~~~D~~~~~~~~~~~~~~---~~~~d   64 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA--------------DLSTPGGRETAVAAVLDRC---GGVLD   64 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------------CTTSHHHHHHHHHHHHHHH---TTCCS
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc--------------cccCCcccHHHHHHHHHHc---CCCcc
Confidence            589999999999999999999999999999998765321              1678999999999988865   36899


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +||||||...                       ..+.+++.+++|+.+++++++++.+.|++.+.++||++||..+..+.
T Consensus        65 ~vi~~Ag~~~-----------------------~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~  121 (255)
T 2dkn_A           65 GLVCCAGVGV-----------------------TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG  121 (255)
T ss_dssp             EEEECCCCCT-----------------------TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTT
T ss_pred             EEEECCCCCC-----------------------cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccc
Confidence            9999999753                       12347899999999999999999999988777899999999876532


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                      .........   ....+......+    ....          +++...|++||++++.+++.++.++  .+++++.++||
T Consensus       122 ~~~~~~~~~---~~~~~~~~~~~~----~~~~----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg  184 (255)
T 2dkn_A          122 AAELPMVEA---MLAGDEARAIEL----AEQQ----------GQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPG  184 (255)
T ss_dssp             GGGCHHHHH---HHHTCHHHHHHH----HHHH----------CCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEEC
T ss_pred             ccccchhhh---hcccchhhhhhh----cccc----------CCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCC
Confidence            100000000   000000000000    0000          1345789999999999999999997  58999999999


Q ss_pred             eeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          245 YVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++.|++....                  ...+++|+|+.+++++..+....+|+++..++.
T Consensus       185 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  245 (255)
T 2dkn_A          185 AVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGG  245 (255)
T ss_dssp             CBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccchhhhhcccchhhHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCC
Confidence            9999864321                  246899999999999987766788888877654

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=4e-28  Score=229.07  Aligned_cols=203  Identities=21%  Similarity=0.195  Sum_probs=166.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE---KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +|++|||||+||||+++|++|+++|+ +|++++|+.   +..++..+++...+ .++.++.||++|.++++++++++.+.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dvtd~~~v~~~~~~i~~~  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG-VRVTIAACDAADREALAALLAELPED  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC-CeEEEEEccCCCHHHHHHHHHHHHHh
Confidence            59999999999999999999999999 789999974   33556666666544 57999999999999999999998777


Q ss_pred             cCCccEEEEccccC-CCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGIT-GISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                       +++|+||||||+. ...+..+                .+.++|++++++|+.+++++.+.+.+.    ..++||++||.
T Consensus       318 -g~ld~vVh~AGv~~~~~~l~~----------------~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~  376 (496)
T 3mje_A          318 -APLTAVFHSAGVAHDDAPVAD----------------LTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSG  376 (496)
T ss_dssp             -SCEEEEEECCCCCCSCCCTTT----------------CCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEH
T ss_pred             -CCCeEEEECCcccCCCCCccc----------------CCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeCh
Confidence             7899999999987 4443333                389999999999999999999988654    45799999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      .+..+.                                           ++...|+++|+++++|++.++.  .++++++
T Consensus       377 a~~~g~-------------------------------------------~g~~~YaAaKa~ldala~~~~~--~Gi~v~s  411 (496)
T 3mje_A          377 AAVWGS-------------------------------------------GGQPGYAAANAYLDALAEHRRS--LGLTASS  411 (496)
T ss_dssp             HHHTTC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHH--TTCCCEE
T ss_pred             HhcCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHh--cCCeEEE
Confidence            887765                                           5678999999999999986654  4899999


Q ss_pred             eecceeecCcccC------------CCCCChhhhccchhhhhhccCC
Q 039097          241 VCPGYVKTEMTYN------------AGRLTVEEGAESPVWLALLHKG  275 (290)
Q Consensus       241 v~PG~v~T~~~~~------------~~~~~~e~~a~~~~~l~~~~~~  275 (290)
                      |+||++.++....            ...++|+++++.+.+.+.....
T Consensus       412 V~pG~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          412 VAWGTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             EEECEESSSCC------CHHHHHTTEEEECHHHHHHHHHHHHHHTCS
T ss_pred             EECCcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHHHcCCCc
Confidence            9999886654322            1246899999988888776653

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=8.2e-28  Score=210.23  Aligned_cols=204  Identities=21%  Similarity=0.108  Sum_probs=155.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |++|++|||||+||||++++++|+++|++|++++|++.+..          ...+.++.+|++|.+++.++++       
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            45789999999999999999999999999999999976533          2468999999999999998887       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||..                        +.+.|++++++|+.+++++++++    ++.+.++||++||..+.
T Consensus        64 ~~D~vi~~Ag~~------------------------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~  115 (267)
T 3rft_A           64 GCDGIVHLGGIS------------------------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTI  115 (267)
T ss_dssp             TCSEEEECCSCC------------------------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGG
T ss_pred             CCCEEEECCCCc------------------------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHh
Confidence            689999999974                        44668899999999999999999    44456899999998776


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ......                              .+..+. ..+.+...|+.||++.+.+++.++.++ +++++.|.|
T Consensus       116 g~~~~~------------------------------~~~~e~-~~~~~~~~Y~~sK~~~e~~~~~~a~~~-g~~~~~vr~  163 (267)
T 3rft_A          116 GYYPQT------------------------------ERLGPD-VPARPDGLYGVSKCFGENLARMYFDKF-GQETALVRI  163 (267)
T ss_dssp             TTSBTT------------------------------SCBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEE
T ss_pred             CCCCCC------------------------------CCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHh-CCeEEEEEe
Confidence            422100                              000000 011345789999999999999999887 778888888


Q ss_pred             ceeecCcccCC---CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          244 GYVKTEMTYNA---GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       244 G~v~T~~~~~~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      |.+.+++....   ..++++++++.+..++..+. ...+.++..+
T Consensus       164 ~~v~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~-~~~~~~~~~s  207 (267)
T 3rft_A          164 GSCTPEPNNYRMLSTWFSHDDFVSLIEAVFRAPV-LGCPVVWGAS  207 (267)
T ss_dssp             CBCSSSCCSTTHHHHBCCHHHHHHHHHHHHHCSC-CCSCEEEECC
T ss_pred             ecccCCCCCCCceeeEEcHHHHHHHHHHHHhCCC-CCceEEEEeC
Confidence            88777654432   23688998888777766444 3333444443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=1.8e-27  Score=258.45  Aligned_cols=211  Identities=18%  Similarity=0.179  Sum_probs=164.8

Q ss_pred             cCCCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEecCccc-----HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKG-IGYEVVRQLALNGIITVLTARDEKG-----GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         3 ~~~~k~~lITGgs~g-IG~aia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      .++||++|||||++| ||+++|++|+++|++|++++|+.+.     +++..+++... +.++..+.||++|.++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~-G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF-DATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT-TCEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc-CCeEEEEEecCCCHHHHHHHHH
Confidence            478999999999999 9999999999999999999998776     44555555333 3468899999999999999999


Q ss_pred             HHHh----hcCCccEEEEccccC----CCCCCCCcccchhhhcccccccccChHHHH----HhhhcccchHHHHHHHhch
Q 039097           77 FIRS----HFGKLDILVNNAGIT----GISSDADTLSGFIEEGVARGKMTQTYESAE----KCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        77 ~~~~----~~~~id~li~~Ag~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~vNv~~~~~l~~~~~~  144 (290)
                      ++.+    .+|++|+||||||+.    .......               +.+.++|+    ..+++|+.+++.+++.+.+
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~---------------~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~ 2276 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRV---------------AGDMSEVGSRAEMEMKVLLWAVQRLISGLSK 2276 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCC---------------CCTTSCTTSHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCccccccc---------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9998    899999999999972    1111100               11334444    4499999999999999999


Q ss_pred             hhccCCCC----eEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHH
Q 039097          145 LLQLSDSA----RIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKA  220 (290)
Q Consensus       145 ~l~~~~~~----~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKa  220 (290)
                      .|++...+    .|+++|+..+..                                             ++...|++||+
T Consensus      2277 ~m~~~~~g~~~~ii~~~ss~~g~~---------------------------------------------g~~~aYsASKa 2311 (3089)
T 3zen_D         2277 IGAERDIASRLHVVLPGSPNRGMF---------------------------------------------GGDGAYGEAKS 2311 (3089)
T ss_dssp             HHHHTTCCCCEEEEEEECSSTTSC---------------------------------------------SSCSSHHHHGG
T ss_pred             HHHHcCCCceeEEEEECCcccccC---------------------------------------------CCchHHHHHHH
Confidence            99876542    233344433322                                             23468999999


Q ss_pred             HHHHHHHHHHhh--C-CCeEEEEeecceee-cCcccCC------------CCCChhhhccchhhhhhccC
Q 039097          221 AMNAYTRILAKK--Y-PNFCINCVCPGYVK-TEMTYNA------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       221 a~~~~~~~la~e--~-~~i~vn~v~PG~v~-T~~~~~~------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+.+|+|+||.|  + ++|+||+++||+|. |++....            +..+|+|+|..+++|+++..
T Consensus      2312 Al~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~~~~r~~~PeEIA~avlfLaS~~a 2381 (3089)
T 3zen_D         2312 ALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEEAGVTTYTTDEMAAMLLDLCTVET 2381 (3089)
T ss_dssp             GHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGGGSCBCEEHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHhcCCCCCCHHHHHHHHHHHhChhh
Confidence            999999999999  6 68999999999998 7765432            23479999999999998654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.95  E-value=5.1e-27  Score=233.29  Aligned_cols=201  Identities=23%  Similarity=0.244  Sum_probs=165.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHH-HCCC-eEEEEecC---cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLA-LNGI-ITVLTARD---EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~-~~g~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .+|++|||||++|||+++|+.|+ ++|+ +|++++|+   .+..++..+++...+ .++.++.||++|.++++++++++.
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G-~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYG-AEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHH
Confidence            47999999999999999999999 7999 59999998   455667777776554 579999999999999999999998


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      +++ +||+||||||+....+..                +.+.++|++++++|+.|++++.+++.|.|      +||++||
T Consensus       608 ~~~-~id~lVnnAGv~~~~~~~----------------~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS  664 (795)
T 3slk_A          608 DEH-PLTAVVHAAGVLDDGVSE----------------SLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSS  664 (795)
T ss_dssp             TTS-CEEEEEECCCCCCCCCGG----------------GCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEE
T ss_pred             HhC-CCEEEEECCCcCCCCchh----------------hCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEcc
Confidence            876 999999999998654433                33899999999999999999999998877      8999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ..+..+.                                           +++..|+++|+++..|++.++.  .|+++|
T Consensus       665 ~ag~~g~-------------------------------------------~g~~~YaAaka~~~alA~~~~~--~Gi~v~  699 (795)
T 3slk_A          665 VSGVLGS-------------------------------------------GGQGNYAAANSFLDALAQQRQS--RGLPTR  699 (795)
T ss_dssp             THHHHTC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHH--TTCCEE
T ss_pred             HHhcCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHH--cCCeEE
Confidence            9988765                                           6789999999755555554433  599999


Q ss_pred             EeecceeecCcccC--------------CCCCChhhhccchhhhhhccC
Q 039097          240 CVCPGYVKTEMTYN--------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       240 ~v~PG~v~T~~~~~--------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +|+||++.|++...              ..+++++++.+.+...+...+
T Consensus       700 sI~pG~v~t~g~~~~~~~~~~~~~~~~g~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          700 SLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             EEEECCCSCCCHHHHHHHHHHHHHHHTTBCCCCHHHHHHHHHHHHTSSC
T ss_pred             EEECCeECcchhhccccHHHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999875321              235677887777666655444

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.94  E-value=2.6e-26  Score=216.86  Aligned_cols=203  Identities=20%  Similarity=0.161  Sum_probs=164.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcc---cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEK---GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++|||||+||||+++|++|+++|+ +|++++|+..   ..++..+++...+ .++.++.||++|.+++.++++++ .
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g-~~v~~~~~Dv~d~~~v~~~~~~i-~  302 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG-ARTTVAACDVTDRESVRELLGGI-G  302 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHTS-C
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC-CEEEEEEeCCCCHHHHHHHHHHH-H
Confidence            478999999999999999999999999 4999999875   3455556665543 56899999999999999999998 5


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||+.......                +.+.+++++++++|+.+++++.+.+.+    .+.++||++||.
T Consensus       303 ~~g~ld~VIh~AG~~~~~~l~----------------~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~  362 (486)
T 2fr1_A          303 DDVPLSAVFHAAATLDDGTVD----------------TLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSF  362 (486)
T ss_dssp             TTSCEEEEEECCCCCCCCCGG----------------GCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEH
T ss_pred             hcCCCcEEEECCccCCCCccc----------------cCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcCh
Confidence            678999999999987544332                238999999999999999999998854    356899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      .+..+.                                           ++...|+++|++++.|++.++.  .++++++
T Consensus       363 a~~~g~-------------------------------------------~g~~~Yaaaka~l~~la~~~~~--~gi~v~~  397 (486)
T 2fr1_A          363 ASAFGA-------------------------------------------PGLGGYAPGNAYLDGLAQQRRS--DGLPATA  397 (486)
T ss_dssp             HHHTCC-------------------------------------------TTCTTTHHHHHHHHHHHHHHHH--TTCCCEE
T ss_pred             HhcCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHh--cCCeEEE
Confidence            877654                                           5668999999999999876654  4899999


Q ss_pred             eecceeecC-cccC----------CCCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTE-MTYN----------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~-~~~~----------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+||++.++ |...          ...++++++++.+...+....
T Consensus       398 i~pG~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          398 VAWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             EEECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             EECCeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999876 4322          135799999999988877554

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=8.6e-26  Score=214.31  Aligned_cols=200  Identities=22%  Similarity=0.191  Sum_probs=165.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcc---cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEK---GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+|++|||||+||||++++++|+++|+ +|++++|+..   ..++..+++... +.++.++.||++|.+++.+++++   
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~-g~~v~~~~~Dvtd~~~v~~~~~~---  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH-GCEVVHAACDVAERDALAALVTA---  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT-TCEEEEEECCSSCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc-CCEEEEEEeCCCCHHHHHHHHhc---
Confidence            478999999999999999999999999 6999999864   345566666543 35699999999999999999886   


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                        +++|+||||||+.......                +.+.+++++++++|+.+++++.+.+.+. +  +.++||++||.
T Consensus       334 --~~ld~VVh~AGv~~~~~~~----------------~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~--~~~~~V~~SS~  392 (511)
T 2z5l_A          334 --YPPNAVFHTAGILDDAVID----------------TLSPESFETVRGAKVCGAELLHQLTADI-K--GLDAFVLFSSV  392 (511)
T ss_dssp             --SCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHHHHHHHHHHHTSSC-T--TCCCEEEEEEG
T ss_pred             --CCCcEEEECCcccCCcccc----------------cCCHHHHHHHHHHHHHHHHHHHHHHhhc-c--CCCEEEEEeCH
Confidence              6899999999987544332                2388999999999999999999987543 1  45799999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      .+..+.                                           ++...|+++|++++.+++.+.  ..++++++
T Consensus       393 a~~~g~-------------------------------------------~g~~~YaaaKa~ld~la~~~~--~~gi~v~s  427 (511)
T 2z5l_A          393 TGTWGN-------------------------------------------AGQGAYAAANAALDALAERRR--AAGLPATS  427 (511)
T ss_dssp             GGTTCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHH--TTTCCCEE
T ss_pred             HhcCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHH--HcCCcEEE
Confidence            887654                                           567899999999999998764  35899999


Q ss_pred             eeccee-ecCcccC----------CCCCChhhhccchhhhhhccC
Q 039097          241 VCPGYV-KTEMTYN----------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v-~T~~~~~----------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+||++ .|+|...          ...++|+++++.+...+....
T Consensus       428 v~pG~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al~~~~  472 (511)
T 2z5l_A          428 VAWGLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAMGRND  472 (511)
T ss_dssp             EEECCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred             EECCcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            999998 8888644          246899999999988877554

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=4.6e-26  Score=195.20  Aligned_cols=193  Identities=20%  Similarity=0.162  Sum_probs=150.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcE-EEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNV-IFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++|++|||||+|+||++++++|+++|++|++++|++++.++..+       ..+ .++.+|++         +.+.+
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------~~~~~~~~~Dl~---------~~~~~   80 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------RGASDIVVANLE---------EDFSH   80 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------TTCSEEEECCTT---------SCCGG
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------CCCceEEEcccH---------HHHHH
Confidence            46889999999999999999999999999999999999887655332       147 88999999         33444


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||..                        ..+++++.+++|+.+++++++++.    +.+.++||++||.
T Consensus        81 ~~~~~D~vi~~ag~~------------------------~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~  132 (236)
T 3e8x_A           81 AFASIDAVVFAAGSG------------------------PHTGADKTILIDLWGAIKTIQEAE----KRGIKRFIMVSSV  132 (236)
T ss_dssp             GGTTCSEEEECCCCC------------------------TTSCHHHHHHTTTHHHHHHHHHHH----HHTCCEEEEECCT
T ss_pred             HHcCCCEEEECCCCC------------------------CCCCccccchhhHHHHHHHHHHHH----HcCCCEEEEEecC
Confidence            556899999999975                        235678899999999999999993    3456899999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      .+..+...                                        +++...|+.+|++++.+++     ..+++++.
T Consensus       133 ~~~~~~~~----------------------------------------~~~~~~Y~~sK~~~e~~~~-----~~gi~~~~  167 (236)
T 3e8x_A          133 GTVDPDQG----------------------------------------PMNMRHYLVAKRLADDELK-----RSSLDYTI  167 (236)
T ss_dssp             TCSCGGGS----------------------------------------CGGGHHHHHHHHHHHHHHH-----HSSSEEEE
T ss_pred             CCCCCCCC----------------------------------------hhhhhhHHHHHHHHHHHHH-----HCCCCEEE
Confidence            65432100                                        0235789999999999886     34899999


Q ss_pred             eecceeecCcccC-----------CCCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          241 VCPGYVKTEMTYN-----------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       241 v~PG~v~T~~~~~-----------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      +.||++.++....           ....+++|+|+.+++++..+.  ..|+.|...
T Consensus       168 lrpg~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~v~  221 (236)
T 3e8x_A          168 VRPGPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH--TIGKTFEVL  221 (236)
T ss_dssp             EEECSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG--GTTEEEEEE
T ss_pred             EeCCcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc--ccCCeEEEe
Confidence            9999999987443           235689999999999988765  566666553

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=3.4e-25  Score=199.44  Aligned_cols=185  Identities=17%  Similarity=0.118  Sum_probs=145.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +++++|||||+|+||++++++|+++|++|++++|+.....+..+.+....+..+.++.+|++|.+++.+++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            5789999999999999999999999999999999988777766666554445688999999999999999886     48


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||......                    ..+...+.+++|+.+++++++++    ++.+.++||++||...+.
T Consensus        79 ~d~vih~A~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g  134 (341)
T 3enk_A           79 ITAAIHFAALKAVGE--------------------SVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYG  134 (341)
T ss_dssp             CCEEEECCCCCCHHH--------------------HHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBC
T ss_pred             CcEEEECccccccCc--------------------cccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEec
Confidence            999999999753211                    33455678999999999998877    555568999999976542


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      ....                               .+..+... ..+...|+.+|++.+.+++.++.++++++++.+.||
T Consensus       135 ~~~~-------------------------------~~~~e~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~  182 (341)
T 3enk_A          135 VPER-------------------------------SPIDETFP-LSATNPYGQTKLMAEQILRDVEAADPSWRVATLRYF  182 (341)
T ss_dssp             SCSS-------------------------------SSBCTTSC-CBCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred             CCCC-------------------------------CCCCCCCC-CCCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeec
Confidence            2100                               00000000 124578999999999999999999988999999999


Q ss_pred             eeecCc
Q 039097          245 YVKTEM  250 (290)
Q Consensus       245 ~v~T~~  250 (290)
                      .+.++.
T Consensus       183 ~v~G~~  188 (341)
T 3enk_A          183 NPVGAH  188 (341)
T ss_dssp             EEECCC
T ss_pred             cccCCc
Confidence            988763

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=1.2e-25  Score=192.94  Aligned_cols=181  Identities=14%  Similarity=0.088  Sum_probs=144.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++|++|||||+|+||++++++|+++|+  +|++++|++.+.++..       ...+.++.+|++|.+++.++++     
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhc-----
Confidence            5789999999999999999999999999  9999999876543211       1247889999999988877665     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+||||||...                       ..+.+++.+++|+.+++.+++++    ++.+.++||++||..
T Consensus        84 --~~d~vi~~ag~~~-----------------------~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           84 --GHDVGFCCLGTTR-----------------------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKG  134 (242)
T ss_dssp             --SCSEEEECCCCCH-----------------------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTT
T ss_pred             --CCCEEEECCCccc-----------------------ccCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCc
Confidence              7999999999641                       23456789999999999999887    444568999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +...                                             +...|+.+|++++.+++.++.+    +++.|
T Consensus       135 ~~~~---------------------------------------------~~~~Y~~sK~~~e~~~~~~~~~----~~~~v  165 (242)
T 2bka_A          135 ADKS---------------------------------------------SNFLYLQVKGEVEAKVEELKFD----RYSVF  165 (242)
T ss_dssp             CCTT---------------------------------------------CSSHHHHHHHHHHHHHHTTCCS----EEEEE
T ss_pred             CCCC---------------------------------------------CcchHHHHHHHHHHHHHhcCCC----CeEEE
Confidence            6431                                             2357999999999999865332    89999


Q ss_pred             ecceeecCcccC-------------C-------CCCChhhhccchhhhhhccC
Q 039097          242 CPGYVKTEMTYN-------------A-------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       242 ~PG~v~T~~~~~-------------~-------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .||++.|++...             .       ...+++|+|+.+++++..+.
T Consensus       166 rpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          166 RPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             ECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             cCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence            999999985321             1       13578999999999988665

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.91  E-value=9.1e-24  Score=179.11  Aligned_cols=191  Identities=10%  Similarity=0.060  Sum_probs=142.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~-~~g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.|+++||||+|+||++++++|+ ++|++|++++|+++ ++++..    . ....+.++.+|++|.+++.++++      
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~~D~~d~~~~~~~~~------   72 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----I-DHERVTVIEGSFQNPGXLEQAVT------   72 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----H-TSTTEEEEECCTTCHHHHHHHHT------
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----c-CCCceEEEECCCCCHHHHHHHHc------
Confidence            34789999999999999999999 89999999999976 544332    1 22468999999999999988876      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+||||||..                                   |+.     ++.+++.|++.+.++||++||..+
T Consensus        73 -~~d~vv~~ag~~-----------------------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           73 -NAEVVFVGAMES-----------------------------------GSD-----MASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             -TCSEEEESCCCC-----------------------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             -CCCEEEEcCCCC-----------------------------------Chh-----HHHHHHHHHhcCCCeEEEEeecee
Confidence             689999999941                                   111     677777778777789999999877


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCch-hhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAA-AYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      ......                 ....+    ..             +... .|+.+|.+++.+++.     .+++++.|
T Consensus       112 ~~~~~~-----------------~~~~~----~~-------------~~~~~~y~~~K~~~e~~~~~-----~~i~~~~v  152 (221)
T 3r6d_A          112 SGEFPV-----------------ALEKW----TF-------------DNLPISYVQGERQARNVLRE-----SNLNYTIL  152 (221)
T ss_dssp             TSCSCH-----------------HHHHH----HH-------------HTSCHHHHHHHHHHHHHHHH-----SCSEEEEE
T ss_pred             cCCCCc-----------------ccccc----cc-------------cccccHHHHHHHHHHHHHHh-----CCCCEEEE
Confidence            653210                 00000    00             0112 799999999998863     48999999


Q ss_pred             ecceeecC-cccCC-----------CCCChhhhccchhhhh--hccCCCCceeEeecCc
Q 039097          242 CPGYVKTE-MTYNA-----------GRLTVEEGAESPVWLA--LLHKGGPSGLFFSRKE  286 (290)
Q Consensus       242 ~PG~v~T~-~~~~~-----------~~~~~e~~a~~~~~l~--~~~~~~~~g~~~~~~~  286 (290)
                      .||++.++ .....           ...+++|+|+.+++++  .++....++.+....+
T Consensus       153 rpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~  211 (221)
T 3r6d_A          153 RLTWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEP  211 (221)
T ss_dssp             EECEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECT
T ss_pred             echhhcCCCCCcceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCC
Confidence            99999988 32221           1467899999999999  8777666666655443

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.91  E-value=6.5e-24  Score=190.66  Aligned_cols=226  Identities=17%  Similarity=0.115  Sum_probs=157.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEE-EeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH-QLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++++|||||+|+||++++++|+++|++|++++|+..+.+...+.+....+.++.++ .+|++|.+++.++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            46789999999999999999999999999999999997766555444433333468888 899999988777665     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+||....                       .+++.+.+++|+.++.++++++.+.   .+.++||++||..
T Consensus        83 --~~d~vih~A~~~~~-----------------------~~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~  134 (342)
T 1y1p_A           83 --GAAGVAHIASVVSF-----------------------SNKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTV  134 (342)
T ss_dssp             --TCSEEEECCCCCSC-----------------------CSCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGG
T ss_pred             --CCCEEEEeCCCCCC-----------------------CCCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHH
Confidence              69999999997531                       1245679999999999999998642   3457999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~  240 (290)
                      +........  .....+...+........   +.     +...  ..+.+...|+.||++.+.+++.++.++ ++++++.
T Consensus       135 ~~~~~~~~~--~~~~~~E~~~~~~~~~~~---~~-----~~~~--~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~  202 (342)
T 1y1p_A          135 SALIPKPNV--EGIYLDEKSWNLESIDKA---KT-----LPES--DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNA  202 (342)
T ss_dssp             GTCCCCTTC--CCCEECTTCCCHHHHHHH---HH-----SCTT--STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEE
T ss_pred             HhcCCCCCC--CCcccCccccCchhhhhh---cc-----cccc--ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            653210000  000011111111111100   00     0000  001235789999999999999999887 5899999


Q ss_pred             eecceeecCcccCC----------------------------CCCChhhhccchhhhhhcc
Q 039097          241 VCPGYVKTEMTYNA----------------------------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------------------~~~~~e~~a~~~~~l~~~~  273 (290)
                      +.||.+.++.....                            ....++|+|+.++.++..+
T Consensus       203 ~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~  263 (342)
T 1y1p_A          203 VLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP  263 (342)
T ss_dssp             EEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT
T ss_pred             EcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc
Confidence            99999999864321                            1246788999888887653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=3.3e-23  Score=176.01  Aligned_cols=200  Identities=12%  Similarity=0.010  Sum_probs=151.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +++|||||+|+||++++++|+++|++|++++|++.+....        ...+.++.+|++|.+++.++++       ++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~d   69 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--------NEHLKVKKADVSSLDEVCEVCK-------GAD   69 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--------CTTEEEECCCTTCHHHHHHHHT-------TCS
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--------cCceEEEEecCCCHHHHHHHhc-------CCC
Confidence            6899999999999999999999999999999997654321        1468999999999999888876       589


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||...                       +.   .+.+++|+.++.++++++.    +.+.++||++||..+....
T Consensus        70 ~vi~~a~~~~-----------------------~~---~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~~  119 (227)
T 3dhn_A           70 AVISAFNPGW-----------------------NN---PDIYDETIKVYLTIIDGVK----KAGVNRFLMVGGAGSLFIA  119 (227)
T ss_dssp             EEEECCCC--------------------------------CCSHHHHHHHHHHHHHH----HTTCSEEEEECCSTTSEEE
T ss_pred             EEEEeCcCCC-----------------------CC---hhHHHHHHHHHHHHHHHHH----HhCCCEEEEeCChhhccCC
Confidence            9999998641                       11   1378899999999999884    4455799999998766543


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ......                                 +....+...|+.+|++.+.+.+.++.+. +++++.+.||++
T Consensus       120 ~~~~~~---------------------------------~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v  165 (227)
T 3dhn_A          120 PGLRLM---------------------------------DSGEVPENILPGVKALGEFYLNFLMKEK-EIDWVFFSPAAD  165 (227)
T ss_dssp             TTEEGG---------------------------------GTTCSCGGGHHHHHHHHHHHHHTGGGCC-SSEEEEEECCSE
T ss_pred             CCCccc---------------------------------cCCcchHHHHHHHHHHHHHHHHHHhhcc-CccEEEEeCCcc
Confidence            110000                                 0001235789999999999999888755 899999999999


Q ss_pred             ecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          247 KTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       247 ~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      .++.....                ...+++|+|+.++.++..+.  ..|+.+...++
T Consensus       166 ~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~--~~g~~~~~~~~  220 (227)
T 3dhn_A          166 MRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK--HHQERFTIGYL  220 (227)
T ss_dssp             EESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC--CCSEEEEEECC
T ss_pred             cCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc--ccCcEEEEEee
Confidence            88754321                13578999999999998776  56666555443

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=5.5e-23  Score=186.11  Aligned_cols=191  Identities=16%  Similarity=0.147  Sum_probs=152.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC-CC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALN-GI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~-g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+++|++|||||+|+||++++++|+++ |+ +|++++|++.+..+..+++.   ...+.++.+|++|.+++.++++    
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~----   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALE----   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTT----
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHh----
Confidence            367899999999999999999999999 98 99999999877666555553   2468999999999998887775    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                         ++|+|||+||.....                    .......+.+++|+.++.++++++.+.    +.++||++||.
T Consensus        91 ---~~D~Vih~Aa~~~~~--------------------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~  143 (344)
T 2gn4_A           91 ---GVDICIHAAALKHVP--------------------IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTD  143 (344)
T ss_dssp             ---TCSEEEECCCCCCHH--------------------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCG
T ss_pred             ---cCCEEEECCCCCCCC--------------------chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCC
Confidence               689999999975310                    022445689999999999999999653    46799999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..                                              +...|+.||++.+.+++.++.++  .++++
T Consensus       144 ~~~~----------------------------------------------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~  177 (344)
T 2gn4_A          144 KAAN----------------------------------------------PINLYGATKLCSDKLFVSANNFKGSSQTQF  177 (344)
T ss_dssp             GGSS----------------------------------------------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEE
T ss_pred             ccCC----------------------------------------------CccHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence            5432                                              23689999999999999999886  58999


Q ss_pred             EEeecceeecCccc--------------C---------CCCCChhhhccchhhhhhcc
Q 039097          239 NCVCPGYVKTEMTY--------------N---------AGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       239 n~v~PG~v~T~~~~--------------~---------~~~~~~e~~a~~~~~l~~~~  273 (290)
                      +.+.||.+.++...              .         ....+++|+++.+++++..+
T Consensus       178 ~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          178 SVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             EEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC
T ss_pred             EEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc
Confidence            99999999875311              0         01357899999998887754

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.89  E-value=4.6e-23  Score=174.51  Aligned_cols=187  Identities=18%  Similarity=0.226  Sum_probs=147.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   86 (290)
                      ++|||||+|+||++++++|+++|++|++++|++.+.++.         ..+.++.+|++| .+++.++++       ++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~-------~~d   65 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLH-------GMD   65 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTT-------TCS
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHc-------CCC
Confidence            699999999999999999999999999999997654321         358999999999 888877765       699


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +||||||...                            .+.+++|+.++.++++++    ++.+.++||++||..+..+.
T Consensus        66 ~vi~~ag~~~----------------------------~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~  113 (219)
T 3dqp_A           66 AIINVSGSGG----------------------------KSLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPE  113 (219)
T ss_dssp             EEEECCCCTT----------------------------SSCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGG
T ss_pred             EEEECCcCCC----------------------------CCcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCC
Confidence            9999999752                            127899999999999998    44556799999998765432


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      .              +.+   .+.                   .+...|+.+|++.+.+++    +..+++++.+.||++
T Consensus       114 ~--------------~~e---~~~-------------------~~~~~Y~~sK~~~e~~~~----~~~~i~~~ilrp~~v  153 (219)
T 3dqp_A          114 K--------------WIG---AGF-------------------DALKDYYIAKHFADLYLT----KETNLDYTIIQPGAL  153 (219)
T ss_dssp             G--------------CCS---HHH-------------------HHTHHHHHHHHHHHHHHH----HSCCCEEEEEEECSE
T ss_pred             c--------------ccc---ccc-------------------ccccHHHHHHHHHHHHHH----hccCCcEEEEeCceE
Confidence            0              000   000                   124789999999999987    456999999999999


Q ss_pred             ecCcccC--------CCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          247 KTEMTYN--------AGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       247 ~T~~~~~--------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      .++....        ....+++|+|+.+++++..+.  ..|+.|..
T Consensus       154 ~g~~~~~~~~~~~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~~~i  197 (219)
T 3dqp_A          154 TEEEATGLIDINDEVSASNTIGDVADTIKELVMTDH--SIGKVISM  197 (219)
T ss_dssp             ECSCCCSEEEESSSCCCCEEHHHHHHHHHHHHTCGG--GTTEEEEE
T ss_pred             ecCCCCCccccCCCcCCcccHHHHHHHHHHHHhCcc--ccCcEEEe
Confidence            9876433        235689999999999988765  44666554

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.89  E-value=5.9e-23  Score=176.61  Aligned_cols=210  Identities=16%  Similarity=0.091  Sum_probs=150.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++|++|||||+|+||++++++|+++  |++|++++|++.+.++    +    ...+.++.+|++|.+++.++++     
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~----~~~~~~~~~D~~d~~~~~~~~~-----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----GGEADVFIGDITDADSINPAFQ-----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----TCCTTEEECCTTSHHHHHHHHT-----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c----CCCeeEEEecCCCHHHHHHHHc-----
Confidence            56889999999999999999999999  8999999998754432    2    2357789999999999888876     


Q ss_pred             cCCccEEEEccccCCCCCC--CCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           82 FGKLDILVNNAGITGISSD--ADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                        ++|+||||||.......  ...         .....+...+.+.+.+++|+.++.++++++.+    .+.++||++||
T Consensus        69 --~~d~vi~~a~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS  133 (253)
T 1xq6_A           69 --GIDALVILTSAVPKMKPGFDPT---------KGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGS  133 (253)
T ss_dssp             --TCSEEEECCCCCCEECTTCCTT---------SSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEE
T ss_pred             --CCCEEEEecccccccccccccc---------ccccchhhccccccceeeeHHHHHHHHHHHHH----cCCCEEEEEcC
Confidence              58999999997642110  000         00001113455667899999999999998853    34579999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ..+......                                      ..+.+...|+.+|++++.+++.     .+++++
T Consensus       134 ~~~~~~~~~--------------------------------------~~~~~~~~y~~sK~~~e~~~~~-----~~i~~~  170 (253)
T 1xq6_A          134 MGGTNPDHP--------------------------------------LNKLGNGNILVWKRKAEQYLAD-----SGTPYT  170 (253)
T ss_dssp             TTTTCTTCG--------------------------------------GGGGGGCCHHHHHHHHHHHHHT-----SSSCEE
T ss_pred             ccCCCCCCc--------------------------------------cccccchhHHHHHHHHHHHHHh-----CCCceE
Confidence            876432100                                      0001123577899999998863     589999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .+.||++.++.....               ...+++|+|+.+++++..+.  ..|+.|...+
T Consensus       171 ~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~~~--~~g~~~~i~~  230 (253)
T 1xq6_A          171 IIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE--AKNKAFDLGS  230 (253)
T ss_dssp             EEEECEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG--GTTEEEEEEE
T ss_pred             EEecceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcCcc--ccCCEEEecC
Confidence            999999999853221               13578999999999887654  3565555443

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=2.9e-22  Score=180.77  Aligned_cols=227  Identities=15%  Similarity=0.030  Sum_probs=162.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCcccH------------HHHHHHHHhcCCCcEEEEEeeCCCHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEKGG------------LEAVEKLKHSGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~-~~g~~Vi~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~Dl~~~~~   70 (290)
                      ..+|++||||||+|||+|++..|+ ..|+.|+++.+..+..            ....+.++..+ .+...+.||++|.++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-LYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-CCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC-CCceeEeCCCCCHHH
Confidence            457999999999999999999999 6899999998765432            22334444444 468999999999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCC-------------CCcccchh---hhc--ccccccccChHHHHHh---hh
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGISSD-------------ADTLSGFI---EEG--VARGKMTQTYESAEKC---LQ  129 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~-------------~~~~~~~~---~~~--~~~~~~~~~~~~~~~~---~~  129 (290)
                      ++++++++.+++|+||+||||+|.......             .+.+.+..   ...  ........+.++++.+   |.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            999999999999999999999997632111             01110000   000  0001112345555544   44


Q ss_pred             cccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 039097          130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP  209 (290)
Q Consensus       130 vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (290)
                      ....+.....+...+.|.  +++++|.+|+..+.....                         .                
T Consensus       207 ~s~~s~w~~al~~a~lla--~G~siva~SYiGse~t~P-------------------------~----------------  243 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQA-------------------------L----------------  243 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGHH-------------------------H----------------
T ss_pred             hhHHHHHHHHHHhhhccc--CCceEEEEeccCcceeec-------------------------C----------------
Confidence            455556666677777776  468999999987765330                         0                


Q ss_pred             CCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceeecCcccCCCCC---------------ChhhhccchhhhhhccC
Q 039097          210 ANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVKTEMTYNAGRL---------------TVEEGAESPVWLALLHK  274 (290)
Q Consensus       210 ~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~---------------~~e~~a~~~~~l~~~~~  274 (290)
                      .....++.+|++|+..++.|+.++.++++|++.||.+.|.-....|.+               +-|.+.+.+.+|+.+.-
T Consensus       244 Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v~~a~vT~AssaIP~~ply~~~l~kvmk~~g~heg~ieq~~rl~~~~l  323 (401)
T 4ggo_A          244 YRKGTIGKAKEHLEATAHRLNKENPSIRAFVSVNKGLVTRASAVIPVIPLYLASLFKVMKEKGNHEGCIEQITRLYAERL  323 (401)
T ss_dssp             HTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCCCCCTTGGGSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTT
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcCccccchhhcCCCchHHHHHHHHHHHhcCCCCchHHHHHHHHHHhh
Confidence            123468999999999999999999889999999999999988887632               44777777777776543

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.89  E-value=2.1e-22  Score=182.28  Aligned_cols=217  Identities=13%  Similarity=0.074  Sum_probs=156.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC----CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG----FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+....    ...+.++.+|++|.+++.++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            567899999999999999999999999999999998653332233222111    1358899999999998888776   


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                          ++|+|||+||.....                    .+.+++++.+++|+.++.++++++.+    .+.++||++||
T Consensus       102 ----~~d~vih~A~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS  153 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSVP--------------------RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAAS  153 (352)
T ss_dssp             ----TCSEEEECCSCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEE
T ss_pred             ----CCCEEEECCcccCch--------------------hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEecc
Confidence                699999999975211                    03467889999999999999999954    35579999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ...+.....         .                      +..+ +..+.+...|+.+|++.+.+++.++.++ +++++
T Consensus       154 ~~~~~~~~~---------~----------------------~~~E-~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~  200 (352)
T 1sb8_A          154 SSTYGDHPG---------L----------------------PKVE-DTIGKPLSPYAVTKYVNELYADVFSRCY-GFSTI  200 (352)
T ss_dssp             GGGGTTCCC---------S----------------------SBCT-TCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCE
T ss_pred             HHhcCCCCC---------C----------------------CCCC-CCCCCCCChhHHHHHHHHHHHHHHHHHc-CCCEE
Confidence            876432200         0                      0000 0001235789999999999999999887 89999


Q ss_pred             EeecceeecCcccCC------------------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          240 CVCPGYVKTEMTYNA------------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+.||.+.++.....                              ....++|+|+.++.++.... ...|..|...
T Consensus       201 ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~  275 (352)
T 1sb8_A          201 GLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGL-DARNQVYNIA  275 (352)
T ss_dssp             EEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEES
T ss_pred             EEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccc-cCCCceEEeC
Confidence            999999998864210                              12367888888877766422 2344455443

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.89  E-value=1.7e-22  Score=181.66  Aligned_cols=227  Identities=15%  Similarity=0.121  Sum_probs=152.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++|++|||||+|+||++++++|+++|++|++++|+........ .+....  ..++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999999876543322 221111  1258889999999998887775     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+|+.....                     ..+..++.+++|+.+++++++++.+..   ..++||++||..
T Consensus        77 --~~d~Vih~A~~~~~~---------------------~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~  130 (337)
T 2c29_D           77 --GCTGVFHVATPMDFE---------------------SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAG  130 (337)
T ss_dssp             --TCSEEEECCCCCCSS---------------------CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGG
T ss_pred             --CCCEEEEeccccCCC---------------------CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHh
Confidence              589999999864110                     112235789999999999999996542   257999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +..+....   .. ..+...+........       .          .++...|+.||++.+.+++.++.+. +++++.+
T Consensus       131 ~~~~~~~~---~~-~~~E~~~~~~~~~~~-------~----------~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~l  188 (337)
T 2c29_D          131 TVNIQEHQ---LP-VYDESCWSDMEFCRA-------K----------KMTAWMYFVSKTLAEQAAWKYAKEN-NIDFITI  188 (337)
T ss_dssp             GTSCSSSC---CS-EECTTCCCCHHHHHH-------H----------CCTTHHHHHHHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred             hcccCCCC---Cc-ccCcccCCchhhhcc-------c----------CCccchHHHHHHHHHHHHHHHHHHc-CCcEEEE
Confidence            65432100   00 000000000000000       0          0123579999999999998887655 8999999


Q ss_pred             ecceeecCcccCC-------------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          242 CPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       242 ~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .||.+.+|.....                         ....++|+|+.+++++..+.  ..|.++...+
T Consensus       189 rp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~  256 (337)
T 2c29_D          189 IPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIYLFENPK--AEGRYICSSH  256 (337)
T ss_dssp             EECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHHHHHCTT--CCEEEEECCE
T ss_pred             eCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHHHhcCcc--cCceEEEeCC
Confidence            9999999864321                         03577888888888776433  4566655443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.89  E-value=1.4e-22  Score=181.84  Aligned_cols=213  Identities=18%  Similarity=0.136  Sum_probs=153.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++++|||||+|+||++++++|+++|  ++|++++|+..  ..+. .+++.  ....+.++.+|++|.+++.+++.    
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~----   74 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPAN-LKDLE--DDPRYTFVKGDVADYELVKELVR----   74 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG-GTTTT--TCTTEEEEECCTTCHHHHHHHHH----
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhH-Hhhhc--cCCceEEEEcCCCCHHHHHHHhh----
Confidence            35579999999999999999999997  89999998742  2211 11121  12468899999999999888873    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                         ++|+|||+||....                    ..+.+++++.+++|+.++.++++++.+.   ...++||++||.
T Consensus        75 ---~~d~vih~A~~~~~--------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~  128 (336)
T 2hun_A           75 ---KVDGVVHLAAESHV--------------------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTD  128 (336)
T ss_dssp             ---TCSEEEECCCCCCH--------------------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEG
T ss_pred             ---CCCEEEECCCCcCh--------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccH
Confidence               79999999997521                    0145677889999999999999999875   224799999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+.....                               .+..+... ..+...|+.+|++.+.+++.++.++ +++++.
T Consensus       129 ~vyg~~~~-------------------------------~~~~E~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i  175 (336)
T 2hun_A          129 EVYGDILK-------------------------------GSFTENDR-LMPSSPYSATKAASDMLVLGWTRTY-NLNASI  175 (336)
T ss_dssp             GGGCCCSS-------------------------------SCBCTTBC-CCCCSHHHHHHHHHHHHHHHHHHHT-TCEEEE
T ss_pred             HHHCCCCC-------------------------------CCcCCCCC-CCCCCccHHHHHHHHHHHHHHHHHh-CCCEEE
Confidence            54321100                               00000001 1245689999999999999999887 899999


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +.||.+.++.....                          ....++|+|+.+++++..+   ..|..|..++
T Consensus       176 lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~v~~  244 (336)
T 2hun_A          176 TRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG---ESREIYNISA  244 (336)
T ss_dssp             EEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC---CTTCEEEECC
T ss_pred             EeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC---CCCCEEEeCC
Confidence            99999999864210                          1235789999988887643   2455554443

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=7.9e-23  Score=183.79  Aligned_cols=209  Identities=15%  Similarity=0.054  Sum_probs=151.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH-HHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE-AVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |++|++|||||+|+||++++++|+++|++|++++|++.+... ..+.+.  ...++.++.+|++|.+++.++++.+    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG--IENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT--CTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc--ccCceeEEECCCCCHHHHHHHHHhc----
Confidence            467899999999999999999999999999999998765432 222221  1235888999999999999998875    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+|||+||....                    ..+.+++++.+++|+.+++++++++.+. .  ..++||++||...
T Consensus        75 -~~d~vih~A~~~~~--------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~--~~~~iv~~SS~~v  130 (345)
T 2z1m_A           75 -QPDEVYNLAAQSFV--------------------GVSFEQPILTAEVDAIGVLRILEALRTV-K--PDTKFYQASTSEM  130 (345)
T ss_dssp             -CCSEEEECCCCCCH--------------------HHHTTSHHHHHHHHTHHHHHHHHHHHHH-C--TTCEEEEEEEGGG
T ss_pred             -CCCEEEECCCCcch--------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHh-C--CCceEEEEechhh
Confidence             79999999997521                    0135678899999999999999999742 1  1379999999864


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC-----CeE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP-----NFC  237 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-----~i~  237 (290)
                      +.....                               .+..+... ..+...|+.+|++.+.+++.++.++.     .+.
T Consensus       131 yg~~~~-------------------------------~~~~e~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~  178 (345)
T 2z1m_A          131 FGKVQE-------------------------------IPQTEKTP-FYPRSPYAVAKLFGHWITVNYREAYNMFACSGIL  178 (345)
T ss_dssp             GCSCSS-------------------------------SSBCTTSC-CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred             cCCCCC-------------------------------CCCCccCC-CCCCChhHHHHHHHHHHHHHHHHHhCCceEeeee
Confidence            322100                               00000000 13457899999999999999998862     345


Q ss_pred             EEEeecceeecCccc-----------C-------------CCCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTY-----------N-------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~-----------~-------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++.+.||...|.+..           .             .....++|+|+.+++++..+.
T Consensus       179 ~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~  239 (345)
T 2z1m_A          179 FNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE  239 (345)
T ss_dssp             CCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS
T ss_pred             eeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            578899987665311           0             014578999999999887544

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=2.6e-22  Score=181.89  Aligned_cols=208  Identities=16%  Similarity=0.042  Sum_probs=155.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++++++|||||+|+||++++++|+++|++|++++|++.+.....+.+.  ...++.++.+|+++.+++.++++.+     
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--VADGMQSEIGDIRDQNKLLESIREF-----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--TTTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--cCCceEEEEccccCHHHHHHHHHhc-----
Confidence            578999999999999999999999999999999998766544444332  1246889999999999999998865     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||+||....                    ..+.+++++.+++|+.++.++++++.+.   ...++||++||...+
T Consensus        80 ~~d~vih~A~~~~~--------------------~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vy  136 (357)
T 1rkx_A           80 QPEIVFHMAAQPLV--------------------RLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCY  136 (357)
T ss_dssp             CCSEEEECCSCCCH--------------------HHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGB
T ss_pred             CCCEEEECCCCccc--------------------ccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHh
Confidence            69999999996311                    1145678899999999999999999653   235799999998653


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC--------C
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--------N  235 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~--------~  235 (290)
                      .....                              ..+..+.. ...+...|+.+|++.+.+++.++.++.        +
T Consensus       137 g~~~~------------------------------~~~~~E~~-~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~g  185 (357)
T 1rkx_A          137 DNKEW------------------------------IWGYRENE-AMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG  185 (357)
T ss_dssp             CCCCS------------------------------SSCBCTTS-CBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC
T ss_pred             CCCCc------------------------------CCCCCCCC-CCCCCCccHHHHHHHHHHHHHHHHHHhhhhccccCC
Confidence            22100                              00000000 012457899999999999999998874        9


Q ss_pred             eEEEEeecceeecCcccC--------------------------CCCCChhhhccchhhhhhc
Q 039097          236 FCINCVCPGYVKTEMTYN--------------------------AGRLTVEEGAESPVWLALL  272 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~--------------------------~~~~~~e~~a~~~~~l~~~  272 (290)
                      ++++.+.||.+.++....                          ......+|+++.++.++..
T Consensus       186 i~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  248 (357)
T 1rkx_A          186 TAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQK  248 (357)
T ss_dssp             CEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHH
T ss_pred             ceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHHHHHHHh
Confidence            999999999999875421                          0124567888887777653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.88  E-value=6.9e-23  Score=178.56  Aligned_cols=192  Identities=20%  Similarity=0.147  Sum_probs=146.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .|++|||||+|+||++++++|+++|++|++++|++.+..          ...+.++.+|++|.+++.++++       ++
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            478999999999999999999999999999999875421          1247889999999998888776       58


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||..                        +.+.+++.+++|+.++.++++++.+    .+.++||++||..+...
T Consensus        65 d~vi~~a~~~------------------------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~  116 (267)
T 3ay3_A           65 DGIIHLGGVS------------------------VERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGY  116 (267)
T ss_dssp             SEEEECCSCC------------------------SCCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTT
T ss_pred             CEEEECCcCC------------------------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCC
Confidence            9999999975                        2245678999999999999999853    45679999999865532


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ....                              .+..+. ..+.+...|+.+|++.+.+++.++.+. +++++.+.||+
T Consensus       117 ~~~~------------------------------~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~lrp~~  164 (267)
T 3ay3_A          117 YPRT------------------------------TRIDTE-VPRRPDSLYGLSKCFGEDLASLYYHKF-DIETLNIRIGS  164 (267)
T ss_dssp             SBTT------------------------------SCBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHTT-CCCEEEEEECB
T ss_pred             CCCC------------------------------CCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHc-CCCEEEEecee
Confidence            1100                              000000 001235789999999999999887654 89999999999


Q ss_pred             e-ecCcccC--CCCCChhhhccchhhhhhccC
Q 039097          246 V-KTEMTYN--AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       246 v-~T~~~~~--~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      + .++....  ....+++++|+.++.++..+.
T Consensus       165 v~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  196 (267)
T 3ay3_A          165 CFPKPKDARMMATWLSVDDFMRLMKRAFVAPK  196 (267)
T ss_dssp             CSSSCCSHHHHHHBCCHHHHHHHHHHHHHSSC
T ss_pred             ecCCCCCCCeeeccccHHHHHHHHHHHHhCCC
Confidence            8 4443211  235789999999998887654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.88  E-value=6.2e-22  Score=178.23  Aligned_cols=232  Identities=15%  Similarity=0.057  Sum_probs=158.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |++|||||+|+||++++++|+++|++|++++|+. .......+.+...  .++.++.+|++|.+++.++++..     ++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL--GNFEFVHGDIRNKNDVTRLITKY-----MP   74 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC--CceEEEEcCCCCHHHHHHHHhcc-----CC
Confidence            4799999999999999999999999999999864 3333334444432  35888999999999999988862     69


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||....                    ..+.+++++.+++|+.++.++++++.+.+.   .++||++||...+..
T Consensus        75 d~vih~A~~~~~--------------------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~  131 (347)
T 1orr_A           75 DSCFHLAGQVAM--------------------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGD  131 (347)
T ss_dssp             SEEEECCCCCCH--------------------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTT
T ss_pred             CEEEECCcccCh--------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCC
Confidence            999999997421                    013567889999999999999999987653   269999999764432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ... .   +...+...+...           ....+..+. ....+...|+.+|++.+.+++.++.++ +++++.+.||+
T Consensus       132 ~~~-~---~~~e~~~~~~~~-----------~~~~~~~e~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~~  194 (347)
T 1orr_A          132 LEQ-Y---KYNETETRYTCV-----------DKPNGYDES-TQLDFHSPYGCSKGAADQYMLDYARIF-GLNTVVFRHSS  194 (347)
T ss_dssp             CTT-S---CEEECSSCEEET-----------TCTTCBCTT-SCCCCCHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECC
T ss_pred             CCc-C---Cccccccccccc-----------ccccCcccc-CCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEEccCc
Confidence            100 0   000000000000           000000000 011245789999999999999999887 89999999999


Q ss_pred             eecCcccCC----------------------C------------CCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          246 VKTEMTYNA----------------------G------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       246 v~T~~~~~~----------------------~------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +.++.....                      +            ...++|+|+.+++++..+. ...|+.|..++
T Consensus       195 v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~g~~~~v~~  268 (347)
T 1orr_A          195 MYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVS-KIRGNAFNIGG  268 (347)
T ss_dssp             EECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHH-HHTTCEEEESS
T ss_pred             eeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccc-cCCCCEEEeCC
Confidence            999863210                      0            2367888888888776311 23455555443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.88  E-value=7.9e-22  Score=178.18  Aligned_cols=217  Identities=13%  Similarity=0.077  Sum_probs=160.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC----CcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF----DNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .+++|++|||||+|+||++++++|+++|++|++++|+........+.+.....    .++.++.+|++|.+++.++++  
T Consensus        22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   99 (351)
T 3ruf_A           22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK--   99 (351)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT--
T ss_pred             CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc--
Confidence            35689999999999999999999999999999999987766665555544321    368999999999998888776  


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                           ++|+|||+||.....                    .+.+++.+.+++|+.++.++++++.    +.+.+++|++|
T Consensus       100 -----~~d~Vih~A~~~~~~--------------------~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~v~~S  150 (351)
T 3ruf_A          100 -----GVDHVLHQAALGSVP--------------------RSIVDPITTNATNITGFLNILHAAK----NAQVQSFTYAA  150 (351)
T ss_dssp             -----TCSEEEECCCCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEE
T ss_pred             -----CCCEEEECCccCCcc--------------------hhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEe
Confidence                 699999999975311                    1456678899999999999999984    34567999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEE
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI  238 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~v  238 (290)
                      |...+.....                               .+..+. ....+...|+.+|.+.+.+++.++.+. ++++
T Consensus       151 S~~vyg~~~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~  197 (351)
T 3ruf_A          151 SSSTYGDHPA-------------------------------LPKVEE-NIGNPLSPYAVTKYVNEIYAQVYARTY-GFKT  197 (351)
T ss_dssp             EGGGGTTCCC-------------------------------SSBCTT-CCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCC
T ss_pred             cHHhcCCCCC-------------------------------CCCccC-CCCCCCChhHHHHHHHHHHHHHHHHHh-CCCE
Confidence            9865432100                               000000 001235789999999999999999887 8999


Q ss_pred             EEeecceeecCcccCC------------------------------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          239 NCVCPGYVKTEMTYNA------------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~------------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      +.+.||.+.++.....                              .....+|+|+.++.++.... ...|..|..
T Consensus       198 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni  272 (351)
T 3ruf_A          198 IGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKD-SAKDNIYNV  272 (351)
T ss_dssp             EEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCG-GGCSEEEEE
T ss_pred             EEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhcc-ccCCCEEEe
Confidence            9999999988753221                              12457899998888776522 234455544

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.88  E-value=3.9e-22  Score=179.81  Aligned_cols=218  Identities=16%  Similarity=0.094  Sum_probs=150.3

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |+++++++||||||+|+||++++++|+++|  +.|+..+|......  .+.+.... ...+.++.+|++|.+++.++++.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence            456778999999999999999999999999  67888887642211  11122111 23689999999999999999886


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      .     ++|+|||+||......                    +.+++++.+++|+.++.++++++.    +.+.++||++
T Consensus        97 ~-----~~d~Vih~A~~~~~~~--------------------~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~v~~  147 (346)
T 4egb_A           97 R-----DVQVIVNFAAESHVDR--------------------SIENPIPFYDTNVIGTVTLLELVK----KYPHIKLVQV  147 (346)
T ss_dssp             H-----TCCEEEECCCCC-----------------------------CHHHHHHTHHHHHHHHHHH----HSTTSEEEEE
T ss_pred             c-----CCCEEEECCcccchhh--------------------hhhCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEe
Confidence            3     6999999999764221                    446678899999999999999984    3456799999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                      ||...+......                              .+..+. ....+...|+.+|.+.+.+++.++.+. +++
T Consensus       148 SS~~vy~~~~~~------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~  195 (346)
T 4egb_A          148 STDEVYGSLGKT------------------------------GRFTEE-TPLAPNSPYSSSKASADMIALAYYKTY-QLP  195 (346)
T ss_dssp             EEGGGGCCCCSS------------------------------CCBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH-CCC
T ss_pred             CchHHhCCCCcC------------------------------CCcCCC-CCCCCCChhHHHHHHHHHHHHHHHHHh-CCC
Confidence            997544321000                              000000 001245789999999999999999876 899


Q ss_pred             EEEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          238 INCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      ++.+.||.+.++.....                          ....++|+|+.++.++..+.   .|..|..
T Consensus       196 ~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i  265 (346)
T 4egb_A          196 VIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNI  265 (346)
T ss_dssp             EEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEE
T ss_pred             EEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEE
Confidence            99999999998854221                          12357899999988887655   4444443

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.88  E-value=2.5e-22  Score=182.02  Aligned_cols=225  Identities=16%  Similarity=0.118  Sum_probs=156.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-GIITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++|||||+|+||++++++|+++ |++|++++|+..  ..+. .+++..  ...+.++.+|++|.+++.+++++.     +
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES-LSDISE--SNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG-GTTTTT--CTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhh-hhhhhc--CCCeEEEECCCCCHHHHHHHHhhc-----C
Confidence            5999999999999999999998 799999998752  2221 112211  236889999999999999988762     7


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-----CCeEEEEcC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-----SARIVNVSS  159 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-----~~~iV~isS  159 (290)
                      +|+|||+||....                    ..+.+++++.+++|+.+++++++++.+.|+.-.     +++||++||
T Consensus        74 ~d~vih~A~~~~~--------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS  133 (361)
T 1kew_A           74 PDAVMHLAAESHV--------------------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHIST  133 (361)
T ss_dssp             CSEEEECCSCCCH--------------------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEE
T ss_pred             CCEEEECCCCcCh--------------------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCC
Confidence            9999999997531                    014567888999999999999999998865321     259999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ...+.......   ... ..                 ....+..+... ..+...|+.+|++.+.+++.++.++ +++++
T Consensus       134 ~~v~g~~~~~~---~~~-~~-----------------~~~~~~~E~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~  190 (361)
T 1kew_A          134 DEVYGDLPHPD---EVE-NS-----------------VTLPLFTETTA-YAPSSPYSASKASSDHLVRAWRRTY-GLPTI  190 (361)
T ss_dssp             GGGGCCCCCGG---GSC-TT-----------------SCCCCBCTTSC-CCCCSHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_pred             HHHhCCCcccc---ccc-cc-----------------ccCCCCCCCCC-CCCCCccHHHHHHHHHHHHHHHHHh-CCcEE
Confidence            75432110000   000 00                 00000000001 1345789999999999999999887 89999


Q ss_pred             EeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          240 CVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .+.||.+.++.....                          ....++|+|+.+++++..+   ..|..|..++
T Consensus       191 ~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~  260 (361)
T 1kew_A          191 VTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGG  260 (361)
T ss_dssp             EEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECC
T ss_pred             EEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecC
Confidence            999999999874310                          1236789999998887653   3455555443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.88  E-value=1.1e-22  Score=182.73  Aligned_cols=208  Identities=15%  Similarity=0.085  Sum_probs=147.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+     ..+.++.+|++|.+++.++++++    
T Consensus        17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-----~~v~~~~~Dl~d~~~~~~~~~~~----   87 (330)
T 2pzm_A           17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-----AGLSVIEGSVTDAGLLERAFDSF----   87 (330)
T ss_dssp             TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-----TTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-----CCceEEEeeCCCHHHHHHHHhhc----
Confidence            577899999999999999999999999999999999765432111111     35889999999999999988865    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+||||||.....                     +.++++  +++|+.+++++++++..    .+.++||++||..+
T Consensus        88 -~~D~vih~A~~~~~~---------------------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~  139 (330)
T 2pzm_A           88 -KPTHVVHSAAAYKDP---------------------DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALC  139 (330)
T ss_dssp             -CCSEEEECCCCCSCT---------------------TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGG
T ss_pred             -CCCEEEECCccCCCc---------------------cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHH
Confidence             799999999975321                     224455  99999999999999963    34679999999865


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE-EE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC-IN  239 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~-vn  239 (290)
                      +.....         .                    ..+..+..   .+...|+.+|++.+.+++.+  ++  ..+| ++
T Consensus       140 ~~~~~~---------~--------------------~~~~~E~~---~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~  185 (330)
T 2pzm_A          140 YGRPAT---------V--------------------PIPIDSPT---APFTSYGISKTAGEAFLMMS--DVPVVSLRLAN  185 (330)
T ss_dssp             GCSCSS---------S--------------------SBCTTCCC---CCCSHHHHHHHHHHHHHHTC--SSCEEEEEECE
T ss_pred             hCCCcc---------C--------------------CCCcCCCC---CCCChHHHHHHHHHHHHHHc--CCCEEEEeeee
Confidence            432100         0                    00000000   13468999999999999887  44  3567 57


Q ss_pred             EeecceeecCccc-----------------CCCCCChhhhcc-chhhhhhccCCCCceeEeecCc
Q 039097          240 CVCPGYVKTEMTY-----------------NAGRLTVEEGAE-SPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       240 ~v~PG~v~T~~~~-----------------~~~~~~~e~~a~-~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .+.||. .+++..                 ......++|+|+ .+++++..+.    |..|..++
T Consensus       186 v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~~~~~~~~----g~~~~v~~  245 (330)
T 2pzm_A          186 VTGPRL-AIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADLSLQEGRP----TGVFNVST  245 (330)
T ss_dssp             EECTTC-CSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHHHTSTTCC----CEEEEESC
T ss_pred             eECcCC-CCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHHHHhhcCC----CCEEEeCC
Confidence            888885 333210                 112357899999 8888876532    55555443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.87  E-value=3.6e-22  Score=178.04  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=145.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEec-Cccc---HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTAR-DEKG---GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r-~~~~---~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ||++|||||+|+||++++++|+++|++|++++| +++.   ... ..++.. ...++.++.+|++|.++++++++     
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSF-LTNLPG-ASEKLHFFNADLSNPDSFAAAIE-----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHH-HHTSTT-HHHHEEECCCCTTCGGGGHHHHT-----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHH-HHhhhc-cCCceEEEecCCCCHHHHHHHHc-----
Confidence            689999999999999999999999999999998 6432   111 111110 01247888999999999888776     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .+|+|||+|+...   ..                  ..+.+++++++|+.+++++++++.+..   +.++||++||..
T Consensus        74 --~~d~vih~A~~~~---~~------------------~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~  127 (322)
T 2p4h_X           74 --GCVGIFHTASPID---FA------------------VSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGS  127 (322)
T ss_dssp             --TCSEEEECCCCC-----------------------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGG
T ss_pred             --CCCEEEEcCCccc---CC------------------CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHH
Confidence              5899999997431   00                  112235689999999999999996541   357999999987


Q ss_pred             CcccccchhhhhcccCCccCcCHHHH-HHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERV-DEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      +..+....    ....+...+..... .+.                  .+....|+.||++.+.+++.++.+. +++++.
T Consensus       128 ~~~~~~~~----~~~~~e~~~~~~~~~~~~------------------~p~~~~Y~~sK~~~e~~~~~~~~~~-gi~~~~  184 (322)
T 2p4h_X          128 AVSFNGKD----KDVLDESDWSDVDLLRSV------------------KPFGWNYAVSKTLAEKAVLEFGEQN-GIDVVT  184 (322)
T ss_dssp             GTSCSSSC----CSEECTTCCCCHHHHHHH------------------CCTTHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred             HcccCCCC----CeecCCccccchhhhccc------------------CcccccHHHHHHHHHHHHHHHHHhc-CCcEEE
Confidence            55432100    00000000000000 000                  0111369999999999988877654 899999


Q ss_pred             eecceeecCcccCC------------------------CCCChhhhccchhhhhhccCCCCceeEe
Q 039097          241 VCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLHKGGPSGLFF  282 (290)
Q Consensus       241 v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~  282 (290)
                      +.||.+.+++....                        ....++|+|+.+++++..+.  .+|++.
T Consensus       185 lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~~~  248 (322)
T 2p4h_X          185 LILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHIYLLENSV--PGGRYN  248 (322)
T ss_dssp             EEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHHHHHHSCC--CCEEEE
T ss_pred             EcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHHHHhhCcC--CCCCEE
Confidence            99999999864320                        13577888888888876543  567755

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.87  E-value=1.4e-21  Score=176.17  Aligned_cols=169  Identities=14%  Similarity=0.049  Sum_probs=129.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+.++|+||||||+|+||++++++|+++|++|++++|++..             ..+.++.+|+++.+++.++++     
T Consensus        15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~-----   76 (347)
T 4id9_A           15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIM-----   76 (347)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHT-----
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHh-----
Confidence            45778999999999999999999999999999999998765             247889999999999888776     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+|+....                      +.+.+++.+++|+.++.++++++.    +.+.++||++||..
T Consensus        77 --~~d~vih~A~~~~~----------------------~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~V~~SS~~  128 (347)
T 4id9_A           77 --GVSAVLHLGAFMSW----------------------APADRDRMFAVNVEGTRRLLDAAS----AAGVRRFVFASSGE  128 (347)
T ss_dssp             --TCSEEEECCCCCCS----------------------SGGGHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEGG
T ss_pred             --CCCEEEECCcccCc----------------------chhhHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEECCHH
Confidence              79999999997532                      445568999999999999999984    34567999999975


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      .+.....                             ...+..+... ..+...|+.+|.+.+.+++.++.+. +++++.+
T Consensus       129 vyg~~~~-----------------------------~~~~~~E~~~-~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~il  177 (347)
T 4id9_A          129 VYPENRP-----------------------------EFLPVTEDHP-LCPNSPYGLTKLLGEELVRFHQRSG-AMETVIL  177 (347)
T ss_dssp             GTTTTSC-----------------------------SSSSBCTTSC-CCCCSHHHHHHHHHHHHHHHHHHHS-SSEEEEE
T ss_pred             HhCCCCC-----------------------------CCCCcCCCCC-CCCCChHHHHHHHHHHHHHHHHHhc-CCceEEE
Confidence            4322000                             0000000001 1345789999999999999998886 8999999


Q ss_pred             ecceee
Q 039097          242 CPGYVK  247 (290)
Q Consensus       242 ~PG~v~  247 (290)
                      .|+.+.
T Consensus       178 Rp~~v~  183 (347)
T 4id9_A          178 RFSHTQ  183 (347)
T ss_dssp             EECEEE
T ss_pred             ccceEe
Confidence            999888

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=1.9e-21  Score=178.48  Aligned_cols=191  Identities=18%  Similarity=0.100  Sum_probs=136.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHH-HCCCeEEEEecCccc---------HHHHHHHHHhcCC----Cc---EEEEEeeCCCH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEKG---------GLEAVEKLKHSGF----DN---VIFHQLDVADP   68 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~-~~g~~Vi~~~r~~~~---------~~~~~~~l~~~~~----~~---~~~~~~Dl~~~   68 (290)
                      ++++|||||+|+||++++++|+ ++|++|++++|+...         .+...+.+....+    ..   +.++.+|+++.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4589999999999999999999 999999999997654         2333222222211    13   88999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL  148 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~  148 (290)
                      +++.+++++    ++++|+|||+||.....                    .+.+++++.+++|+.+++++++++    ++
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~--------------------~~~~~~~~~~~~Nv~g~~~ll~a~----~~  133 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG--------------------ESVRDPLKYYDNNVVGILRLLQAM----LL  133 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH--------------------HHHHCHHHHHHHHHHHHHHHHHHH----HH
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC--------------------cchhhHHHHHHHHhHHHHHHHHHH----HH
Confidence            998888764    45699999999975311                    034677889999999999999987    33


Q ss_pred             CCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          149 SDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       149 ~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                      .+.++||++||...+......                ...        ....+..+. ..+.+...|+.+|++.+.+++.
T Consensus       134 ~~~~~iv~~SS~~v~g~~~~~----------------~~~--------~~~~~~~E~-~~~~p~~~Y~~sK~~~e~~~~~  188 (397)
T 1gy8_A          134 HKCDKIIFSSSAAIFGNPTMG----------------SVS--------TNAEPIDIN-AKKSPESPYGESKLIAERMIRD  188 (397)
T ss_dssp             TTCCEEEEEEEGGGTBSCCC-----------------------------CCCCBCTT-SCCBCSSHHHHHHHHHHHHHHH
T ss_pred             hCCCEEEEECCHHHhCCCCcc----------------ccc--------ccccCcCcc-CCCCCCCchHHHHHHHHHHHHH
Confidence            456799999996543211000                000        000000000 0112357899999999999999


Q ss_pred             HHhhCCCeEEEEeecceeecCc
Q 039097          229 LAKKYPNFCINCVCPGYVKTEM  250 (290)
Q Consensus       229 la~e~~~i~vn~v~PG~v~T~~  250 (290)
                      ++.++ +++++.+.||.+.++.
T Consensus       189 ~~~~~-gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          189 CAEAY-GIKGICLRYFNACGAH  209 (397)
T ss_dssp             HHHHH-CCEEEEEEECEEECCC
T ss_pred             HHHHH-CCcEEEEeccceeCCC
Confidence            99888 8999999999997764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.87  E-value=1.2e-21  Score=176.55  Aligned_cols=184  Identities=16%  Similarity=0.112  Sum_probs=135.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc------HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG------GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      +|++|||||+|+||++++++|+++|++|++++|+...      ..+..+++....+.++.++.+|++|.+++.+++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            5899999999999999999999999999999986543      233334443322245889999999999998888752 


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                          ++|+|||+||.....                    .+.+++++.+++|+.++.++++++    ++.+.++||++||
T Consensus        81 ----~~d~vih~A~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS  132 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAVG--------------------ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSS  132 (348)
T ss_dssp             ----CEEEEEECCSCCCHH--------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEE
T ss_pred             ----CCCEEEECCCCcCcc--------------------chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECc
Confidence                799999999975311                    034667889999999999999987    4445679999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ...+.....                               .+..+.....+....|+.+|++.+.+++.++.+.+++++.
T Consensus       133 ~~~~g~~~~-------------------------------~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~  181 (348)
T 1ek6_A          133 ATVYGNPQY-------------------------------LPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV  181 (348)
T ss_dssp             GGGGCSCSS-------------------------------SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             HHHhCCCCC-------------------------------CCcCCCCCCCCCCCchHHHHHHHHHHHHHHHhcCCCcceE
Confidence            765421100                               0000000001225789999999999999999884459999


Q ss_pred             EeecceeecC
Q 039097          240 CVCPGYVKTE  249 (290)
Q Consensus       240 ~v~PG~v~T~  249 (290)
                      .+.|+.+..+
T Consensus       182 ~lR~~~v~G~  191 (348)
T 1ek6_A          182 LLRYFNPTGA  191 (348)
T ss_dssp             EEEECEEECC
T ss_pred             EEeeccccCC
Confidence            9999887765

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.87  E-value=5.9e-22  Score=178.13  Aligned_cols=203  Identities=17%  Similarity=0.107  Sum_probs=144.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      .++|||||+|+||++++++|+++|++|++++|++.+.+.    +..   ..+.++.+|++|.+++.++++       ++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----l~~---~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR----LAY---LEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG----GGG---GCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh----hcc---CCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            379999999999999999999999999999998766432    211   247889999999998887775       699


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||....                      +.+++++.+++|+.++.++++++.+.    +.++||++||...+...
T Consensus        80 ~vih~a~~~~~----------------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~  133 (342)
T 2x4g_A           80 GVIFSAGYYPS----------------------RPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRH  133 (342)
T ss_dssp             EEEEC----------------------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCC
T ss_pred             EEEECCccCcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcC
Confidence            99999996521                      34567889999999999999999653    45799999998765422


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCC----chhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPAN----AAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ...                             ..+.  .+..+.+    ...|+.+|++.+.+++.++.+  +++++.+.
T Consensus       134 ~~~-----------------------------~~~~--E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~~--g~~~~ilr  180 (342)
T 2x4g_A          134 PQG-----------------------------LPGH--EGLFYDSLPSGKSSYVLCKWALDEQAREQARN--GLPVVIGI  180 (342)
T ss_dssp             TTS-----------------------------SCBC--TTCCCSSCCTTSCHHHHHHHHHHHHHHHHHHT--TCCEEEEE
T ss_pred             CCC-----------------------------CCCC--CCCCCCccccccChHHHHHHHHHHHHHHHhhc--CCcEEEEe
Confidence            000                             0000  0000112    568999999999999999875  89999999


Q ss_pred             cceeecCcc-c------------CC---------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          243 PGYVKTEMT-Y------------NA---------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       243 PG~v~T~~~-~------------~~---------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      ||.+.++.. .            ..         ....++|+|+.++.++..+.  . |..|...
T Consensus       181 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~-g~~~~v~  242 (342)
T 2x4g_A          181 PGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGR--I-GERYLLT  242 (342)
T ss_dssp             ECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSC--T-TCEEEEC
T ss_pred             CCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCC--C-CceEEEc
Confidence            999998865 2            00         13477889999888887654  2 4444443

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.87  E-value=5.4e-22  Score=215.96  Aligned_cols=176  Identities=19%  Similarity=0.105  Sum_probs=133.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHH---HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGL---EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+|++|||||++|||+++|+.|+++|++ |++++|+..+.+   +..+++... +.++.++.||++|.++++++++++. 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dvsd~~~v~~~~~~~~- 1960 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GVQVLVSTSNASSLDGARSLITEAT- 1960 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT-TCEEEEECCCSSSHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC-CCEEEEEecCCCCHHHHHHHHHHHH-
Confidence            5799999999999999999999999996 888899876543   344455443 3568899999999999999999987 


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++++||+||||||+....+..                +.+.++|++++++|+.|++++.+.+.+.|++.  ++||++||.
T Consensus      1961 ~~g~id~lVnnAgv~~~~~~~----------------~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~--g~iV~iSS~ 2022 (2512)
T 2vz8_A         1961 QLGPVGGVFNLAMVLRDAVLE----------------NQTPEFFQDVSKPKYSGTANLDRVTREACPEL--DYFVIFSSV 2022 (2512)
T ss_dssp             HHSCEEEEEECCCC--------------------------------CTTTTHHHHHHHHHHHHHHCTTC--CEEEEECCH
T ss_pred             hcCCCcEEEECCCcCCCCchh----------------hCCHHHHHHHHHHHHHHHHHHHHHHHHhcccC--CEEEEecch
Confidence            479999999999987543333                33889999999999999999999999888643  899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ++..+.                                           ++...|+++|+++.+|++.+..+  |....+
T Consensus      2023 ag~~g~-------------------------------------------~g~~~Y~aaKaal~~l~~~rr~~--Gl~~~a 2057 (2512)
T 2vz8_A         2023 SCGRGN-------------------------------------------AGQANYGFANSAMERICEKRRHD--GLPGLA 2057 (2512)
T ss_dssp             HHHTTC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHT--TSCCCE
T ss_pred             hhcCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHC--CCcEEE
Confidence            887764                                           56789999999999999976665  444444


Q ss_pred             eecce
Q 039097          241 VCPGY  245 (290)
Q Consensus       241 v~PG~  245 (290)
                      +.+|.
T Consensus      2058 ~~~g~ 2062 (2512)
T 2vz8_A         2058 VQWGA 2062 (2512)
T ss_dssp             EEECC
T ss_pred             EEccC
Confidence            44444

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.87  E-value=9.5e-22  Score=175.38  Aligned_cols=208  Identities=18%  Similarity=0.136  Sum_probs=153.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.+++|||||+|+||++++++|+++|++|++++|+... +.    +      .+.++.+|++|.+++.++++.     ++
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l------~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P------NVEMISLDIMDSQRVKKVISD-----IK   74 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T------TEEEEECCTTCHHHHHHHHHH-----HC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c------eeeEEECCCCCHHHHHHHHHh-----cC
Confidence            35799999999999999999999999999999998764 21    1      488899999999999998876     37


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+||.....                    .+.+++++.+++|+.++.++++++ +.+.  +.++||++||...+.
T Consensus        75 ~d~vih~A~~~~~~--------------------~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g  131 (321)
T 2pk3_A           75 PDYIFHLAAKSSVK--------------------DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYG  131 (321)
T ss_dssp             CSEEEECCSCCCHH--------------------HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTB
T ss_pred             CCEEEEcCcccchh--------------------hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcC
Confidence            99999999975311                    134568899999999999999999 5442  468999999986543


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      .....                             ..+..+. ..+.+...|+.+|++.+.+++.++.++ +++++.+.||
T Consensus       132 ~~~~~-----------------------------~~~~~E~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp~  180 (321)
T 2pk3_A          132 MILPE-----------------------------ESPVSEE-NQLRPMSPYGVSKASVGMLARQYVKAY-GMDIIHTRTF  180 (321)
T ss_dssp             SCCGG-----------------------------GCSBCTT-SCCBCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEEC
T ss_pred             CCCCC-----------------------------CCCCCCC-CCCCCCCccHHHHHHHHHHHHHHHHHc-CCCEEEEEeC
Confidence            21000                             0000000 011345789999999999999999876 8999999999


Q ss_pred             eeecCcccC-------------------------------CCCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          245 YVKTEMTYN-------------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       245 ~v~T~~~~~-------------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+.++....                               .....++|+|+.+++++..+   ..|..|..+
T Consensus       181 ~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~  249 (321)
T 2pk3_A          181 NHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVC  249 (321)
T ss_dssp             EEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEES
T ss_pred             cccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeC
Confidence            998875321                               01246788999888887755   234444433

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.87  E-value=2e-21  Score=178.72  Aligned_cols=200  Identities=12%  Similarity=0.048  Sum_probs=137.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH----------------HHHHHHHhcCCCcEEEEEeeCCCH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL----------------EAVEKLKHSGFDNVIFHQLDVADP   68 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~Dl~~~   68 (290)
                      ++.++|||||+|+||++++++|+++|++|++++|+.....                +....+.......+.++.+|+++.
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            5789999999999999999999999999999998743321                112222111224588999999999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL  148 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~  148 (290)
                      +++.++++.+     ++|+|||+||.......                 ..+++.+...+++|+.++.++++++.+.   
T Consensus        90 ~~~~~~~~~~-----~~D~Vih~A~~~~~~~~-----------------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---  144 (404)
T 1i24_A           90 EFLAESFKSF-----EPDSVVHFGEQRSAPYS-----------------MIDRSRAVYTQHNNVIGTLNVLFAIKEF---  144 (404)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHH-----------------TSCHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHhcc-----CCCEEEECCCCCCccch-----------------hhCccchhhhHHHHHHHHHHHHHHHHHh---
Confidence            9999988865     69999999997532100                 1155667889999999999999999643   


Q ss_pred             CCC-CeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCC-CCCCCCCCCchhhhhhHHHHHHHH
Q 039097          149 SDS-ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGS-PETKGWPANAAAYILSKAAMNAYT  226 (290)
Q Consensus       149 ~~~-~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Y~~sKaa~~~~~  226 (290)
                       +. ++||++||...+.... .    +.  +...+..            + ..+. ........+...|+.||++.+.++
T Consensus       145 -~~~~~~V~~SS~~vyg~~~-~----~~--~E~~~~~------------~-~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~  203 (404)
T 1i24_A          145 -GEECHLVKLGTMGEYGTPN-I----DI--EEGYITI------------T-HNGRTDTLPYPKQASSFYHLSKVHDSHNI  203 (404)
T ss_dssp             -CTTCEEEEECCGGGGCCCS-S----CB--CSSEEEE------------E-ETTEEEEEECCCCCCSHHHHHHHHHHHHH
T ss_pred             -CCCcEEEEeCcHHHhCCCC-C----CC--Ccccccc------------c-cccccccccCCCCCCChhHHHHHHHHHHH
Confidence             33 5999999975432110 0    00  0000000            0 0000 000000123568999999999999


Q ss_pred             HHHHhhCCCeEEEEeecceeecCcc
Q 039097          227 RILAKKYPNFCINCVCPGYVKTEMT  251 (290)
Q Consensus       227 ~~la~e~~~i~vn~v~PG~v~T~~~  251 (290)
                      +.++.++ +++++.+.||.+.+|..
T Consensus       204 ~~~~~~~-gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          204 AFTCKAW-GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             HHHHHHH-CCEEEEEEECEEECSCC
T ss_pred             HHHHHhc-CCeEEEEecceeeCCCC
Confidence            9998877 89999999999998853

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.87  E-value=1e-21  Score=163.80  Aligned_cols=192  Identities=14%  Similarity=0.066  Sum_probs=142.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++++++||||+|+||++++++|+++|++|++++|++.+...       .....+.++.+|++|.+++.++++       +
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~D~~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVA-------G   67 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------ccCCceEEEEecCCCHHHHHHHHc-------C
Confidence            34799999999999999999999999999999999765321       112358899999999998888776       5


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+||.....                     +      ..++|+.++..+++++.+    .+.++||++||.....
T Consensus        68 ~d~vi~~a~~~~~~---------------------~------~~~~n~~~~~~~~~~~~~----~~~~~~v~~Ss~~~~~  116 (206)
T 1hdo_A           68 QDAVIVLLGTRNDL---------------------S------PTTVMSEGARNIVAAMKA----HGVDKVVACTSAFLLW  116 (206)
T ss_dssp             CSEEEECCCCTTCC---------------------S------CCCHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTS
T ss_pred             CCEEEECccCCCCC---------------------C------ccchHHHHHHHHHHHHHH----hCCCeEEEEeeeeecc
Confidence            89999999975320                     1      124788888888888743    3457999999985433


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      ...                                       ..+.+...|+.+|++++.+++.     .+++++.+.||
T Consensus       117 ~~~---------------------------------------~~~~~~~~y~~~K~~~e~~~~~-----~~i~~~~lrp~  152 (206)
T 1hdo_A          117 DPT---------------------------------------KVPPRLQAVTDDHIRMHKVLRE-----SGLKYVAVMPP  152 (206)
T ss_dssp             CTT---------------------------------------CSCGGGHHHHHHHHHHHHHHHH-----TCSEEEEECCS
T ss_pred             Ccc---------------------------------------cccccchhHHHHHHHHHHHHHh-----CCCCEEEEeCC
Confidence            210                                       0001457899999999998852     48999999999


Q ss_pred             ee-ecCcccC----------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          245 YV-KTEMTYN----------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v-~T~~~~~----------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++ .++....          ....+++|+|+.+++++..+.  ..|+.+..++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~g  204 (206)
T 1hdo_A          153 HIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE--YDGHSTYPSHQ  204 (206)
T ss_dssp             EEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST--TTTCEEEEECC
T ss_pred             cccCCCCCcceEecccCCCCCCccCHHHHHHHHHHHhcCcc--ccccceeeecc
Confidence            98 3433221          134578999999999987754  56777666543

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.87  E-value=1e-21  Score=177.03  Aligned_cols=224  Identities=16%  Similarity=0.107  Sum_probs=152.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      |.+|  +++|||||+|+||++++++|+++  |++|++++|+... ..+..+++   ....+.++.+|++|.+++.++++ 
T Consensus         1 Ms~m--~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-   74 (348)
T 1oc2_A            1 MSQF--KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI---LGDRVELVVGDIADAELVDKLAA-   74 (348)
T ss_dssp             --CC--SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG---CSSSEEEEECCTTCHHHHHHHHT-
T ss_pred             CCcC--cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh---ccCCeEEEECCCCCHHHHHHHhh-
Confidence            4443  68999999999999999999999  8999999997532 11111111   12468899999999998888776 


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                            .+|+|||+||....                    ..+.+++++.+++|+.++.++++++.+.    + .+||++
T Consensus        75 ------~~d~vih~A~~~~~--------------------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~  123 (348)
T 1oc2_A           75 ------KADAIVHYAAESHN--------------------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHV  123 (348)
T ss_dssp             ------TCSEEEECCSCCCH--------------------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEE
T ss_pred             ------cCCEEEECCcccCc--------------------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEe
Confidence                  46999999997531                    0134667889999999999999999764    3 499999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                      ||...+............ ..+                  ...+..+... ..+...|+.+|++.+.+++.++.++ +++
T Consensus       124 SS~~vyg~~~~~~~~~~~-~~~------------------~~~~~~E~~~-~~~~~~Y~~sK~~~e~~~~~~~~~~-gi~  182 (348)
T 1oc2_A          124 STDEVYGDLPLREDLPGH-GEG------------------PGEKFTAETN-YNPSSPYSSTKAASDLIVKAWVRSF-GVK  182 (348)
T ss_dssp             EEGGGGCCBCCGGGSTTT-TCS------------------TTSSBCTTSC-CCCCSHHHHHHHHHHHHHHHHHHHH-CCE
T ss_pred             cccceeCCCccccccccc-ccc------------------cCCCcCCCCC-CCCCCccHHHHHHHHHHHHHHHHHh-CCC
Confidence            997543211000000000 000                  0000000001 1245789999999999999999887 899


Q ss_pred             EEEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          238 INCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      ++.+.||.+.++.....                          ....++|+|+.+++++..+   ..|..|..+
T Consensus       183 ~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~  253 (348)
T 1oc2_A          183 ATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIG  253 (348)
T ss_dssp             EEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEEC
T ss_pred             EEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeC
Confidence            99999999998864310                          1246789999988887643   245555544

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.87  E-value=4e-21  Score=164.60  Aligned_cols=191  Identities=15%  Similarity=0.040  Sum_probs=131.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|++|||||+|+||++++++|+++| ++|++++|+++++.+.       ....+.++.+|++|.+++.++++      
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------~~~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------YPTNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------ccCCcEEEEecCCCHHHHHHHhc------
Confidence            446899999999999999999999999 8999999997654321       12368999999999999988876      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+||||||..                        ..+              ..++.+++.|++.+.++||++||..+
T Consensus        88 -~~D~vv~~a~~~------------------------~~~--------------~~~~~~~~~~~~~~~~~iV~iSS~~~  128 (236)
T 3qvo_A           88 -GQDIVYANLTGE------------------------DLD--------------IQANSVIAAMKACDVKRLIFVLSLGI  128 (236)
T ss_dssp             -TCSEEEEECCST------------------------THH--------------HHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred             -CCCEEEEcCCCC------------------------chh--------------HHHHHHHHHHHHcCCCEEEEEeccee
Confidence             689999999842                        111              23556777778777789999999876


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      .......                 ..+        .     ...........|..+|.++         +-.+++++.|.
T Consensus       129 ~~~~~~~-----------------~~~--------~-----~~~~~~~~~~~~~~~~~~l---------~~~gi~~~~vr  169 (236)
T 3qvo_A          129 YDEVPGK-----------------FVE--------W-----NNAVIGEPLKPFRRAADAI---------EASGLEYTILR  169 (236)
T ss_dssp             ----------------------------------------------CGGGHHHHHHHHHH---------HTSCSEEEEEE
T ss_pred             cCCCCcc-----------------ccc--------c-----hhhcccchHHHHHHHHHHH---------HHCCCCEEEEe
Confidence            5432100                 000        0     0000011234455444332         13589999999


Q ss_pred             cceeecCcccCC-----------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          243 PGYVKTEMTYNA-----------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       243 PG~v~T~~~~~~-----------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      ||++.++.....           ...+++|+|+.+++++.++....+..+....
T Consensus       170 Pg~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~  223 (236)
T 3qvo_A          170 PAWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQ  223 (236)
T ss_dssp             ECEEECCSCCCCEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEEC
T ss_pred             CCcccCCCCcceEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecC
Confidence            999998864331           1358999999999999988766644444333

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.87  E-value=1.2e-21  Score=178.43  Aligned_cols=219  Identities=11%  Similarity=0.066  Sum_probs=156.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC-CHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA-DPAAIHSVADFI   78 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~   78 (290)
                      |.+|++++||||||+|+||++++++|+++ |++|++++|+..+.....+      ...+.++.+|++ +.+++.++++  
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~------~~~v~~~~~Dl~~d~~~~~~~~~--   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK------HERMHFFEGDITINKEWVEYHVK--   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG------STTEEEEECCTTTCHHHHHHHHH--
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc------CCCeEEEeCccCCCHHHHHHHhc--
Confidence            55678899999999999999999999998 9999999998765443221      136999999999 9999988887  


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                           ++|+|||+||......                    ..++..+.+++|+.++.++++++..    .+ +++|++|
T Consensus        91 -----~~d~Vih~A~~~~~~~--------------------~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~v~~S  140 (372)
T 3slg_A           91 -----KCDVILPLVAIATPAT--------------------YVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPS  140 (372)
T ss_dssp             -----HCSEEEECBCCCCHHH--------------------HHHCHHHHHHHHTTTTHHHHHHHHH----HT-CEEEEEC
T ss_pred             -----cCCEEEEcCccccHHH--------------------HhhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEeC
Confidence                 5899999999763210                    3356678899999999999999843    34 7999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCC--CCCCCCchhhhhhHHHHHHHHHHHHhhCCCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPET--KGWPANAAAYILSKAAMNAYTRILAKKYPNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i  236 (290)
                      |...+......         +                  ..+.....  .....+...|+.+|.+.+.+++.++.+  ++
T Consensus       141 S~~vyg~~~~~---------~------------------~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~--g~  191 (372)
T 3slg_A          141 TSEVYGMCADE---------Q------------------FDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGME--GL  191 (372)
T ss_dssp             CGGGGBSCCCS---------S------------------BCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT--TC
T ss_pred             cHHHhCCCCCC---------C------------------CCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC--CC
Confidence            96543221000         0                  00000000  000023468999999999999999987  99


Q ss_pred             EEEEeecceeecCcccC----------------------C------------CCCChhhhccchhhhhhccCCCCceeEe
Q 039097          237 CINCVCPGYVKTEMTYN----------------------A------------GRLTVEEGAESPVWLALLHKGGPSGLFF  282 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~----------------------~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~  282 (290)
                      ++..+.|+.+.++....                      .            .....+|+|+.++.++..+.....|..|
T Consensus       192 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~  271 (372)
T 3slg_A          192 NFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIY  271 (372)
T ss_dssp             EEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEE
T ss_pred             CEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceE
Confidence            99999999998876321                      0            1246799999999988876543455555


Q ss_pred             ecCc
Q 039097          283 SRKE  286 (290)
Q Consensus       283 ~~~~  286 (290)
                      ...+
T Consensus       272 ni~~  275 (372)
T 3slg_A          272 NIGN  275 (372)
T ss_dssp             EECC
T ss_pred             EeCC
Confidence            5544

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.87  E-value=3.3e-22  Score=179.78  Aligned_cols=226  Identities=16%  Similarity=0.168  Sum_probs=146.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH--HHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE--AVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+....  ....+.  ...++.++.+|++|.+++.++++       
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIA-------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHT-------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHc-------
Confidence            6899999999999999999999999999999998654321  112232  12358889999999988877765       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||+|+.....                     ..+..++.+++|+.+++++++++.+..   ..++||++||..+.
T Consensus        80 ~~D~Vih~A~~~~~~---------------------~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~  135 (338)
T 2rh8_A           80 GCDFVFHVATPVHFA---------------------SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAV  135 (338)
T ss_dssp             TCSEEEEESSCCCC------------------------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHH
T ss_pred             CCCEEEEeCCccCCC---------------------CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHe
Confidence            589999999864210                     111224589999999999999986532   25799999998654


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .+.....  .....+...+......                 ....+....|+.||++.+.+++.++.+. +++++.+.|
T Consensus       136 ~~~~~~~--~~~~~~E~~~~~~~~~-----------------~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~~lrp  195 (338)
T 2rh8_A          136 TINQLDG--TGLVVDEKNWTDIEFL-----------------TSAKPPTWGYPASKTLAEKAAWKFAEEN-NIDLITVIP  195 (338)
T ss_dssp             HHHHHTC--SCCCCCTTTTTCC------------------------CCCCCCTTSCCHHHHHHHHHHHHH-TCCEEEEEE
T ss_pred             ecCCcCC--CCcccChhhccchhhc-----------------cccCCccchHHHHHHHHHHHHHHHHHHc-CCcEEEEeC
Confidence            3210000  0000000000000000                 0000112269999999999998887654 899999999


Q ss_pred             ceeecCcccCC--------------------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          244 GYVKTEMTYNA--------------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       244 G~v~T~~~~~~--------------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |.+.+|.....                                ....++|+|+.+++++..+.  ..|.++..++
T Consensus       196 ~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~  268 (338)
T 2rh8_A          196 TLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGRYICCAA  268 (338)
T ss_dssp             CEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEEEEECSE
T ss_pred             CceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCcEEEecC
Confidence            99999864321                                13567888888888775433  4566655443

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.86  E-value=1.2e-21  Score=178.04  Aligned_cols=209  Identities=15%  Similarity=0.071  Sum_probs=144.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHH--CCCeEEEEecCcccHHHHH------HHHHhcCCCcEEEEEeeCCCHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLAL--NGIITVLTARDEKGGLEAV------EKLKHSGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~--~g~~Vi~~~r~~~~~~~~~------~~l~~~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      ++++++||||||+|+||++++++|++  +|++|++++|+........      ..........+.++.+|+++.+++.++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            67899999999999999999999999  8999999999765211100      011111223578999999999998887


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                            ...++|+|||+||....                      +.+++++.+++|+.++.++++++.    +.+ .+|
T Consensus        87 ------~~~~~D~vih~A~~~~~----------------------~~~~~~~~~~~Nv~gt~~ll~aa~----~~~-~~~  133 (362)
T 3sxp_A           87 ------EKLHFDYLFHQAAVSDT----------------------TMLNQELVMKTNYQAFLNLLEIAR----SKK-AKV  133 (362)
T ss_dssp             ------TTSCCSEEEECCCCCGG----------------------GCCCHHHHHHHHTHHHHHHHHHHH----HTT-CEE
T ss_pred             ------hccCCCEEEECCccCCc----------------------cccCHHHHHHHHHHHHHHHHHHHH----HcC-CcE
Confidence                  23589999999996421                      346788999999999999999993    333 459


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP  234 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~  234 (290)
                      |++||...+.....                                +..+.. .+.+...|+.+|++.+.+++.++.+  
T Consensus       134 V~~SS~~vyg~~~~--------------------------------~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~--  178 (362)
T 3sxp_A          134 IYASSAGVYGNTKA--------------------------------PNVVGK-NESPENVYGFSKLCMDEFVLSHSND--  178 (362)
T ss_dssp             EEEEEGGGGCSCCS--------------------------------SBCTTS-CCCCSSHHHHHHHHHHHHHHHTTTT--
T ss_pred             EEeCcHHHhCCCCC--------------------------------CCCCCC-CCCCCChhHHHHHHHHHHHHHHhcc--
Confidence            99999543322100                                000000 1123568999999999999999887  


Q ss_pred             CeEEEEeecceeecCcccC------------------------------CCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          235 NFCINCVCPGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                       +++..+.|+.+..|....                              .....++|+|+.+++++..+   ..| .|..
T Consensus       179 -~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i  253 (362)
T 3sxp_A          179 -NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNV  253 (362)
T ss_dssp             -SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEE
T ss_pred             -CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEe
Confidence             455555555555443211                              01346899999999887754   356 4443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.86  E-value=8.6e-22  Score=174.99  Aligned_cols=206  Identities=18%  Similarity=0.052  Sum_probs=151.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +++|||||+|+||++++++|+++|++|++++|+.....+..       ...+.++.+|++|.+ +.++++       . |
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~-------~-d   64 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIK-------G-D   64 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCC-------C-S
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcC-------C-C
Confidence            47999999999999999999999999999999876533211       235888999999987 655443       3 9


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||.....                    .+.+++...+++|+.++.++++++.    +.+.++||++||...+...
T Consensus        65 ~vih~A~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~iv~~SS~~vyg~~  120 (312)
T 3ko8_A           65 VVFHFAANPEVR--------------------LSTTEPIVHFNENVVATFNVLEWAR----QTGVRTVVFASSSTVYGDA  120 (312)
T ss_dssp             EEEECCSSCSSS--------------------GGGSCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSC
T ss_pred             EEEECCCCCCch--------------------hhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeCcHHHhCCC
Confidence            999999954211                    1567788999999999999999984    3356799999997654321


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..                               .+..+... ..+...|+.+|++.+.+++.++.++ +++++.+.||.+
T Consensus       121 ~~-------------------------------~~~~e~~~-~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~~~lrp~~v  167 (312)
T 3ko8_A          121 DV-------------------------------IPTPEEEP-YKPISVYGAAKAAGEVMCATYARLF-GVRCLAVRYANV  167 (312)
T ss_dssp             SS-------------------------------SSBCTTSC-CCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECEE
T ss_pred             CC-------------------------------CCCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHh-CCCEEEEeeccc
Confidence            00                               00000001 1345789999999999999999888 999999999999


Q ss_pred             ecCcccCC--------------------------CCCChhhhccchhhhhhccC-CCCceeEeecC
Q 039097          247 KTEMTYNA--------------------------GRLTVEEGAESPVWLALLHK-GGPSGLFFSRK  285 (290)
Q Consensus       247 ~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~-~~~~g~~~~~~  285 (290)
                      .+|.....                          ....++|+|+.+++++..+. ....|..|...
T Consensus       168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ni~  233 (312)
T 3ko8_A          168 VGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVG  233 (312)
T ss_dssp             ECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEEEES
T ss_pred             cCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEEEEc
Confidence            99864321                          12358999999999887621 22455555444

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.86  E-value=2e-21  Score=180.54  Aligned_cols=217  Identities=14%  Similarity=0.070  Sum_probs=148.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc---HHHHHHHHHhc--------CCCcEEEEEeeCCCHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG---GLEAVEKLKHS--------GFDNVIFHQLDVADPAA   70 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~---~~~~~~~l~~~--------~~~~~~~~~~Dl~~~~~   70 (290)
                      ..+.+++||||||+|+||++++++|+++|++|++++|++..   .....+.+...        ...++.++.+|+++.++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            45667899999999999999999999999999999999873   22333333221        12469999999999887


Q ss_pred             HHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD  150 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~  150 (290)
                      +.        .++++|+||||||...                       ..+.+++.+++|+.++.++++++.+     .
T Consensus       145 l~--------~~~~~d~Vih~A~~~~-----------------------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~  188 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTD-----------------------HFGDDDEFEKVNVQGTVDVIRLAQQ-----H  188 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC------------------------------CHHHHHHHHHHHHHHHHHH-----T
T ss_pred             CC--------CcCCCCEEEECCcccC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHh-----c
Confidence            77        4578999999999763                       3356788999999999999999965     4


Q ss_pred             CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 039097          151 SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA  230 (290)
Q Consensus       151 ~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la  230 (290)
                      .++||++||..+ ....... .....                     +.+....  ..+.+...|+.+|.+.+.+++.++
T Consensus       189 ~~~~v~~SS~~~-G~~~~~~-~~~~~---------------------~~E~~~~--~~~~~~~~Y~~sK~~~E~~~~~~~  243 (427)
T 4f6c_A          189 HARLIYVSTISV-GTYFDID-TEDVT---------------------FSEADVY--KGQLLTSPYTRSKFYSELKVLEAV  243 (427)
T ss_dssp             TCEEEEEEEGGG-GSEECSS-CSCCE---------------------ECTTCSC--SSCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEECchHh-CCCccCC-CCCcc---------------------ccccccc--cCCCCCCchHHHHHHHHHHHHHHH
Confidence            579999999876 2110000 00000                     0000000  001245789999999999999876


Q ss_pred             hhCCCeEEEEeecceeecCcccCC--------------------------------CCCChhhhccchhhhhhccCCCCc
Q 039097          231 KKYPNFCINCVCPGYVKTEMTYNA--------------------------------GRLTVEEGAESPVWLALLHKGGPS  278 (290)
Q Consensus       231 ~e~~~i~vn~v~PG~v~T~~~~~~--------------------------------~~~~~e~~a~~~~~l~~~~~~~~~  278 (290)
                      .  .+++++.+.||.|.++.....                                .....+++|+.+++++..+.   .
T Consensus       244 ~--~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~  318 (427)
T 4f6c_A          244 N--NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---P  318 (427)
T ss_dssp             H--TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---C
T ss_pred             H--cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---C
Confidence            4  589999999999998864431                                12356899999999887655   4


Q ss_pred             eeEeec
Q 039097          279 GLFFSR  284 (290)
Q Consensus       279 g~~~~~  284 (290)
                      |..|..
T Consensus       319 g~~~~l  324 (427)
T 4f6c_A          319 QIIYHV  324 (427)
T ss_dssp             CSEEEE
T ss_pred             CCEEEe
Confidence            444443

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.86  E-value=5.8e-21  Score=171.60  Aligned_cols=181  Identities=17%  Similarity=0.118  Sum_probs=128.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+++|++|++++|......+..+.+....+.++.++.+|+++.+++.++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            69999999999999999999999999999875432222223332222235788999999999998888752     6999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+||......                    +.++..+.+++|+.+++++++++    ++.+.++||++||...+....
T Consensus        77 vih~A~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~  132 (338)
T 1udb_A           77 VIHFAGLKAVGE--------------------SVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNP  132 (338)
T ss_dssp             EEECCSCCCHHH--------------------HHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCC
T ss_pred             EEECCccCcccc--------------------chhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCC
Confidence            999999752110                    23456778999999999999876    334557999999975432110


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+..+.....++...|+.||++.+.+++.++.+.+++++..+.|+.+.
T Consensus       133 ~-------------------------------~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~  181 (338)
T 1udb_A          133 K-------------------------------IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPV  181 (338)
T ss_dssp             S-------------------------------SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEE
T ss_pred             C-------------------------------CCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceec
Confidence            0                               000000000022568999999999999999988778888888776554


Q ss_pred             c
Q 039097          248 T  248 (290)
Q Consensus       248 T  248 (290)
                      .
T Consensus       182 G  182 (338)
T 1udb_A          182 G  182 (338)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.86  E-value=3.4e-21  Score=171.38  Aligned_cols=204  Identities=18%  Similarity=0.100  Sum_probs=146.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |++|||||+|+||++++++|+++|..|++..|+....+.        ....+.++.+|+++ +++.++++       ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~--------~~~~~~~~~~Dl~~-~~~~~~~~-------~~d   65 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF--------VNEAARLVKADLAA-DDIKDYLK-------GAE   65 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG--------SCTTEEEECCCTTT-SCCHHHHT-------TCS
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh--------cCCCcEEEECcCCh-HHHHHHhc-------CCC
Confidence            479999999999999999999999555554444433221        12358899999999 88777765       799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+|+.....                    .+.+++++.+++|+.+++++++++.    +.+.++||++||...+...
T Consensus        66 ~vih~a~~~~~~--------------------~~~~~~~~~~~~nv~~~~~l~~~~~----~~~~~~iv~~SS~~vyg~~  121 (313)
T 3ehe_A           66 EVWHIAANPDVR--------------------IGAENPDEIYRNNVLATYRLLEAMR----KAGVSRIVFTSTSTVYGEA  121 (313)
T ss_dssp             EEEECCCCCCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEECCGGGGCSC
T ss_pred             EEEECCCCCChh--------------------hhhhCHHHHHHHHHHHHHHHHHHHH----HcCCCeEEEeCchHHhCcC
Confidence            999999954211                    1557788999999999999999874    3456799999997654321


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..                               .+..+.. ...+...|+.+|++.+.+++.++.++ +++++.+.|+.+
T Consensus       122 ~~-------------------------------~~~~E~~-~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~ilRp~~v  168 (313)
T 3ehe_A          122 KV-------------------------------IPTPEDY-PTHPISLYGASKLACEALIESYCHTF-DMQAWIYRFANV  168 (313)
T ss_dssp             SS-------------------------------SSBCTTS-CCCCCSHHHHHHHHHHHHHHHHHHHT-TCEEEEEECSCE
T ss_pred             CC-------------------------------CCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHhc-CCCEEEEeeccc
Confidence            00                               0000000 11345789999999999999999888 899999999999


Q ss_pred             ecCcccC--------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          247 KTEMTYN--------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       247 ~T~~~~~--------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .++....                          .....++|+|+.+++++.   ....|..|...+
T Consensus       169 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~---~~~~~~~~ni~~  231 (313)
T 3ehe_A          169 IGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLR---GDERVNIFNIGS  231 (313)
T ss_dssp             ESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTT---CCSSEEEEECCC
T ss_pred             cCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhc---cCCCCceEEECC
Confidence            8874321                          013467899999888876   224455555443

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.85  E-value=7.7e-21  Score=170.83  Aligned_cols=207  Identities=16%  Similarity=0.070  Sum_probs=138.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++++++|||||+|+||++++++|+++|++|++++|+.....+...++     ..+.++.+|++|.+++.++++.     
T Consensus        18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-----~~~~~~~~Dl~d~~~~~~~~~~-----   87 (333)
T 2q1w_A           18 GSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-----PNLTFVEGSIADHALVNQLIGD-----   87 (333)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-----TTEEEEECCTTCHHHHHHHHHH-----
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-----CCceEEEEeCCCHHHHHHHHhc-----
Confidence            467889999999999999999999999999999999865422111111     3588899999999999988875     


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|+|||+||.....                     +.++++  +++|+.++.++++++.+    .+.++||++||...
T Consensus        88 ~~~D~vih~A~~~~~~---------------------~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~  140 (333)
T 2q1w_A           88 LQPDAVVHTAASYKDP---------------------DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALC  140 (333)
T ss_dssp             HCCSEEEECCCCCSCT---------------------TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGG
T ss_pred             cCCcEEEECceecCCC---------------------ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHH
Confidence            2799999999976321                     123344  99999999999999965    34579999999754


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH-HHhhCCCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI-LAKKYPNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~-la~e~~~i~vn~v  241 (290)
                      +.....         .+.                   .+..+..  .+....|+.+|++.+.+++. ++      .+..+
T Consensus       141 ~g~~~~---------~~~-------------------~~~~E~~--~p~~~~Y~~sK~~~E~~~~~s~~------~~~il  184 (333)
T 2q1w_A          141 YGVKPI---------QQP-------------------VRLDHPR--NPANSSYAISKSANEDYLEYSGL------DFVTF  184 (333)
T ss_dssp             GCSCCC---------SSS-------------------BCTTSCC--CCTTCHHHHHHHHHHHHHHHHTC------CEEEE
T ss_pred             hCCCcc---------cCC-------------------CCcCCCC--CCCCCchHHHHHHHHHHHHhhhC------CeEEE
Confidence            320000         000                   0000000  12226899999999999988 76      23334


Q ss_pred             ecceeecCcc----------------------cCCCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          242 CPGYVKTEMT----------------------YNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       242 ~PG~v~T~~~----------------------~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      .|+.+..+..                      .......++|+|+.+++++..+.    |..|..++
T Consensus       185 R~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~----g~~~~v~~  247 (333)
T 2q1w_A          185 RLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVG----HGAYHFSS  247 (333)
T ss_dssp             EESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHHHHHTTCC----CEEEECSC
T ss_pred             eeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHHHHHhcCC----CCEEEeCC
Confidence            4443333220                      01123578999999988877544    55555543

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.85  E-value=5.9e-21  Score=174.51  Aligned_cols=184  Identities=16%  Similarity=0.082  Sum_probs=133.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++++++|||||+|+||++++++|+++| ++|++++|+.....+.   +.  ....+.++.+|++|.+++.++++     
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~--~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP--DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC--CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc--CCCceEEEECCCCCHHHHHHHhh-----
Confidence            3667899999999999999999999999 9999999986543211   11  12468899999999988776654     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~  160 (290)
                        ++|+|||+||.....                    .+.+++++.+++|+.++.++++++.    +. +.++||++||.
T Consensus        99 --~~d~Vih~A~~~~~~--------------------~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~  152 (377)
T 2q1s_A           99 --EYDYVFHLATYHGNQ--------------------SSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAG  152 (377)
T ss_dssp             --CCSEEEECCCCSCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC
T ss_pred             --CCCEEEECCCccCch--------------------hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCH
Confidence              799999999975211                    1346778899999999999999984    34 45799999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCC-CC-CCchhhhhhHHHHHHHHHHHHhhCCCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKG-WP-ANAAAYILSKAAMNAYTRILAKKYPNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~Y~~sKaa~~~~~~~la~e~~~i~v  238 (290)
                      ..+.....                        ..... .+..   .+ .. .+...|+.+|++.+.+++.++.++ ++++
T Consensus       153 ~vyg~~~~------------------------~~~~~-~E~~---~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~  203 (377)
T 2q1s_A          153 CSIAEKTF------------------------DDAKA-TEET---DIVSLHNNDSPYSMSKIFGEFYSVYYHKQH-QLPT  203 (377)
T ss_dssp             ---------------------------------------CCC---CCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CCCE
T ss_pred             HHcCCCCC------------------------CCcCc-cccc---ccccccCCCCchHHHHHHHHHHHHHHHHHh-CCCE
Confidence            54321100                        00000 0000   00 00 234689999999999999998776 8999


Q ss_pred             EEeecceeecCcc
Q 039097          239 NCVCPGYVKTEMT  251 (290)
Q Consensus       239 n~v~PG~v~T~~~  251 (290)
                      +.+.||.+.++..
T Consensus       204 ~ilRp~~v~G~~~  216 (377)
T 2q1s_A          204 VRARFQNVYGPGE  216 (377)
T ss_dssp             EEEEECCEECTTC
T ss_pred             EEEeeccEECCCC
Confidence            9999999988765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.85  E-value=4.1e-22  Score=167.57  Aligned_cols=174  Identities=11%  Similarity=0.008  Sum_probs=137.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++++||||+|+||++++++|+++|+  +|++++|++.+           ....+.++.+|+++.+++.+++       
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------~~~~~~~~~~D~~~~~~~~~~~-------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------EHPRLDNPVGPLAELLPQLDGS-------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------CCTTEECCBSCHHHHGGGCCSC-------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------cCCCceEEeccccCHHHHHHhh-------
Confidence            578999999999999999999999998  99999998765           1135788899999887665544       


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                        +|+|||+||....                      +.+.+++.+++|+.++..+++++.+    .+.++||++||..+
T Consensus        66 --~d~vi~~a~~~~~----------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~  117 (215)
T 2a35_A           66 --IDTAFCCLGTTIK----------------------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGA  117 (215)
T ss_dssp             --CSEEEECCCCCHH----------------------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTC
T ss_pred             --hcEEEECeeeccc----------------------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCccc
Confidence              8999999996421                      2356788999999999999999843    45579999999866


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE-EEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC-INCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~-vn~v  241 (290)
                      ..                                             ++...|+.+|++.+.+++.+     +++ ++.+
T Consensus       118 ~~---------------------------------------------~~~~~y~~sK~~~e~~~~~~-----~~~~~~~v  147 (215)
T 2a35_A          118 DA---------------------------------------------KSSIFYNRVKGELEQALQEQ-----GWPQLTIA  147 (215)
T ss_dssp             CT---------------------------------------------TCSSHHHHHHHHHHHHHTTS-----CCSEEEEE
T ss_pred             CC---------------------------------------------CCccHHHHHHHHHHHHHHHc-----CCCeEEEE
Confidence            43                                             12357999999999998642     888 9999


Q ss_pred             ecceeecCcccC-----C------------CCCChhhhccchhhhhhccC
Q 039097          242 CPGYVKTEMTYN-----A------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       242 ~PG~v~T~~~~~-----~------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .||++.++....     .            ...+++|+|+.++.++..+.
T Consensus       148 rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~  197 (215)
T 2a35_A          148 RPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  197 (215)
T ss_dssp             ECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             eCceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC
Confidence            999999875321     0            12466888998888877553

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.85  E-value=2.5e-20  Score=157.69  Aligned_cols=198  Identities=14%  Similarity=-0.006  Sum_probs=137.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+++|++|++++|++.+..+.       ....+.++.+|++|.++  +       .++++|+
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~~D~~d~~~--~-------~~~~~d~   65 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-------LGATVATLVKEPLVLTE--A-------DLDSVDA   65 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-------TCTTSEEEECCGGGCCH--H-------HHTTCSE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-------cCCCceEEecccccccH--h-------hcccCCE
Confidence            599999999999999999999999999999997654432       12358899999999887  2       2357999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+||.....                           ....+|+.++.++++++    ++.+ +++|++||..+.....
T Consensus        66 vi~~ag~~~~~---------------------------~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~~~~~~~  113 (224)
T 3h2s_A           66 VVDALSVPWGS---------------------------GRGYLHLDFATHLVSLL----RNSD-TLAVFILGSASLAMPG  113 (224)
T ss_dssp             EEECCCCCTTS---------------------------SCTHHHHHHHHHHHHTC----TTCC-CEEEEECCGGGSBCTT
T ss_pred             EEECCccCCCc---------------------------chhhHHHHHHHHHHHHH----HHcC-CcEEEEecceeeccCC
Confidence            99999975210                           12356777776666665    6566 8999999987654321


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      ...   ....+                          ....|.+...|+.+|++.+.+ +.+.. ..+++++.+.||++.
T Consensus       114 ~~~---~~~~~--------------------------~~~~~~~~~~y~~sK~~~e~~-~~~~~-~~~i~~~ivrp~~v~  162 (224)
T 3h2s_A          114 ADH---PMILD--------------------------FPESAASQPWYDGALYQYYEY-QFLQM-NANVNWIGISPSEAF  162 (224)
T ss_dssp             CSS---CGGGG--------------------------CCGGGGGSTTHHHHHHHHHHH-HHHTT-CTTSCEEEEEECSBC
T ss_pred             CCc---ccccc--------------------------CCCCCccchhhHHHHHHHHHH-HHHHh-cCCCcEEEEcCcccc
Confidence            100   00000                          000112256799999999955 33332 258999999999998


Q ss_pred             cCcccC---------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          248 TEMTYN---------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       248 T~~~~~---------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ++....               ....+++|+|+.++.++..+.  ..|+.|...+
T Consensus       163 g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~~~~~  214 (224)
T 3h2s_A          163 PSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT--AIRDRIVVRD  214 (224)
T ss_dssp             CCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC--CTTSEEEEEE
T ss_pred             CCCcccCceecccccccCCCCCceEeHHHHHHHHHHHhcCcc--ccCCEEEEec
Confidence            773211               124689999999999998776  4555555443

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.85  E-value=5.6e-21  Score=173.15  Aligned_cols=204  Identities=15%  Similarity=0.101  Sum_probs=142.8

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.+++++++|||||+|+||++++++|+++| ++|++++|+.....  .+.+   .  .+. +.+|+++.+.++++++.  
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~--~~~-~~~d~~~~~~~~~~~~~--  110 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---V--DLN-IADYMDKEDFLIQIMAG--  110 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---T--TSC-CSEEEEHHHHHHHHHTT--
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---c--Cce-EeeecCcHHHHHHHHhh--
Confidence            445678999999999999999999999999 89999999865421  1111   1  122 67999999888877763  


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ..++++|+|||+||....                      +.+++++.+++|+.++.++++++.+    .+. +||++||
T Consensus       111 ~~~~~~d~Vih~A~~~~~----------------------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS  163 (357)
T 2x6t_A          111 EEFGDVEAIFHEGACSST----------------------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASS  163 (357)
T ss_dssp             CCCSSCCEEEECCSCCCT----------------------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEE
T ss_pred             cccCCCCEEEECCcccCC----------------------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcc
Confidence            134579999999997532                      2245678999999999999999965    234 9999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ...+.....         .+                      ..+.. .+.+...|+.+|++.+.+++.++.++ +++++
T Consensus       164 ~~v~g~~~~---------~~----------------------~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~  210 (357)
T 2x6t_A          164 AATYGGRTS---------DF----------------------IESRE-YEKPLNVFGYSKFLFDEYVRQILPEA-NSQIV  210 (357)
T ss_dssp             GGGGCSCSS---------CC----------------------CSSGG-GCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEE
T ss_pred             hHHhCCCCC---------CC----------------------cCCcC-CCCCCChhHHHHHHHHHHHHHHHHHc-CCCEE
Confidence            865422100         00                      00000 01234689999999999999999876 89999


Q ss_pred             EeecceeecCcccC-------------------------------CCCCChhhhccchhhhhhccC
Q 039097          240 CVCPGYVKTEMTYN-------------------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       240 ~v~PG~v~T~~~~~-------------------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .+.||.+.++....                               .....++|+|+.+++++..+.
T Consensus       211 ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~  276 (357)
T 2x6t_A          211 GFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV  276 (357)
T ss_dssp             EEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC
T ss_pred             EEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC
Confidence            99999998775320                               011356888888888877554

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=3.7e-20  Score=168.32  Aligned_cols=169  Identities=18%  Similarity=0.127  Sum_probs=119.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |++|||||+|+||++++++|+++|++|++++|+..... +..+.+...   ...++.++.+|++|.+++.++++.+    
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence            68999999999999999999999999999999865421 112222111   1235888999999999999998875    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+|||+||......                    +.++++..+++|+.++.++++++.+...+ ..++||++||...
T Consensus        78 -~~d~vih~A~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v  135 (372)
T 1db3_A           78 -QPDEVYNLGAMSHVAV--------------------SFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSEL  135 (372)
T ss_dssp             -CCSEEEECCCCCTTTT--------------------TTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGG
T ss_pred             -CCCEEEECCcccCccc--------------------cccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhh
Confidence             6999999999753211                    44567889999999999999999776543 2479999999765


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                      +.....                               .+..+. ....+...|+.+|++.+.+++.++.++
T Consensus       136 ~g~~~~-------------------------------~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~  174 (372)
T 1db3_A          136 YGLVQE-------------------------------IPQKET-TPFYPRSPYAVAKLYAYWITVNYRESY  174 (372)
T ss_dssp             GTTCCS-------------------------------SSBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCC-------------------------------CCCCcc-CCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence            432100                               000000 001235789999999999999999876

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.84  E-value=7.3e-21  Score=169.30  Aligned_cols=189  Identities=18%  Similarity=0.091  Sum_probs=113.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|++|||||+|+||++++++|+++|++|++++|+...           .  .  ++.+|+++.+++.++++..     ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~--~--~~~~Dl~d~~~~~~~~~~~-----~~   61 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P--K--FEQVNLLDSNAVHHIIHDF-----QP   61 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------CHHHHHHH-----CC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C--C--eEEecCCCHHHHHHHHHhh-----CC
Confidence            6899999999999999999999999999999987543           0  1  6789999999999888864     69


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||......                    +.+++++.+++|+.++.++++++.+.    + ++||++||...+..
T Consensus        62 d~vih~A~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~  116 (315)
T 2ydy_A           62 HVIVHCAAERRPDV--------------------VENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDG  116 (315)
T ss_dssp             SEEEECC---------------------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCS
T ss_pred             CEEEECCcccChhh--------------------hhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCC
Confidence            99999999753211                    45678899999999999999999652    3 49999999875432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      . .    .                           +..+. ..+.+...|+.+|++.+.+++.++.++..+|++.|. |+
T Consensus       117 ~-~----~---------------------------~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~lR~~~v~-G~  162 (315)
T 2ydy_A          117 T-N----P---------------------------PYREE-DIPAPLNLYGKTKLDGEKAVLENNLGAAVLRIPILY-GE  162 (315)
T ss_dssp             S-S----C---------------------------SBCTT-SCCCCCSHHHHHHHHHHHHHHHHCTTCEEEEECSEE-CS
T ss_pred             C-C----C---------------------------CCCCC-CCCCCcCHHHHHHHHHHHHHHHhCCCeEEEeeeeee-CC
Confidence            1 0    0                           00000 001235789999999999999987766667776666 55


Q ss_pred             eec---Ccc---------cC----------CCCCChhhhccchhhhhhcc
Q 039097          246 VKT---EMT---------YN----------AGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       246 v~T---~~~---------~~----------~~~~~~e~~a~~~~~l~~~~  273 (290)
                      ..+   .+.         ..          .....++|+|+.+++++..+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  212 (315)
T 2ydy_A          163 VEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKR  212 (315)
T ss_dssp             CSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHH
T ss_pred             CCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhh
Confidence            444   111         11          12357899999998887754

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.84  E-value=9.3e-21  Score=168.41  Aligned_cols=176  Identities=21%  Similarity=0.216  Sum_probs=130.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+++|++|++++|......+   .+    ...+.++.+|+++.+++.+++++.     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~   69 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV----PKGVPFFRVDLRDKEGVERAFREF-----RPTH   69 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS----CTTCCEECCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc----ccCeEEEECCCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999999999999985432111   11    124678899999999999888752     7999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+|+.....                    .+.+++.+.+++|+.+++++++++.    +.+.++||++||..+..+..
T Consensus        70 vi~~a~~~~~~--------------------~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~  125 (311)
T 2p5y_A           70 VSHQAAQASVK--------------------VSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEV  125 (311)
T ss_dssp             EEECCSCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCC
T ss_pred             EEECccccCch--------------------hhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCC
Confidence            99999965210                    1456788899999999999999984    34457999999973222110


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      ..                             ..+..+. ..+.+...|+.||++.+.+++.++.++ +++++.+.||.+.
T Consensus       126 ~~-----------------------------~~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp~~v~  174 (311)
T 2p5y_A          126 PE-----------------------------GERAEET-WPPRPKSPYAASKAAFEHYLSVYGQSY-GLKWVSLRYGNVY  174 (311)
T ss_dssp             CT-----------------------------TCCBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECEEE
T ss_pred             CC-----------------------------CCCcCCC-CCCCCCChHHHHHHHHHHHHHHHHHHc-CCCEEEEeecccc
Confidence            00                             0000000 001235689999999999999999876 8999999999998


Q ss_pred             cCc
Q 039097          248 TEM  250 (290)
Q Consensus       248 T~~  250 (290)
                      +|.
T Consensus       175 Gp~  177 (311)
T 2p5y_A          175 GPR  177 (311)
T ss_dssp             CTT
T ss_pred             CcC
Confidence            875

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.84  E-value=5.7e-20  Score=164.46  Aligned_cols=175  Identities=15%  Similarity=0.108  Sum_probs=133.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +++|||||+|+||++++++|+++|++|++++|+.....+   .+    ...+.++.+|+++.+++.+++++     .++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~----~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   69 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED---AI----TEGAKFYNGDLRDKAFLRDVFTQ-----ENIE   69 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG---GS----CTTSEEEECCTTCHHHHHHHHHH-----SCEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh---hc----CCCcEEEECCCCCHHHHHHHHhh-----cCCC
Confidence            579999999999999999999999999999997654321   11    12578899999999998888875     3799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||.....                    .+.+++++.+++|+.++.++++++.    +.+.++||++||...+...
T Consensus        70 ~vih~a~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~Ss~~~~~~~  125 (330)
T 2c20_A           70 AVMHFAADSLVG--------------------VSMEKPLQYYNNNVYGALCLLEVMD----EFKVDKFIFSSTAATYGEV  125 (330)
T ss_dssp             EEEECCCCCCHH--------------------HHHHSHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEECCGGGGCSC
T ss_pred             EEEECCcccCcc--------------------ccccCHHHHHHHHhHHHHHHHHHHH----HcCCCEEEEeCCceeeCCC
Confidence            999999975311                    0346778899999999999999884    3455799999997543221


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..                               .+..+. ..+.+...|+.+|++.+.+++.++.++ +++++.+.||.+
T Consensus       126 ~~-------------------------------~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilrp~~v  172 (330)
T 2c20_A          126 DV-------------------------------DLITEE-TMTNPTNTYGETKLAIEKMLHWYSQAS-NLRYKIFRYFNV  172 (330)
T ss_dssp             SS-------------------------------SSBCTT-SCCCCSSHHHHHHHHHHHHHHHHHHTS-SCEEEEEECSEE
T ss_pred             CC-------------------------------CCCCcC-CCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEecCcc
Confidence            00                               000000 001235789999999999999999887 899999999988


Q ss_pred             ecCc
Q 039097          247 KTEM  250 (290)
Q Consensus       247 ~T~~  250 (290)
                      .++.
T Consensus       173 ~G~~  176 (330)
T 2c20_A          173 AGAT  176 (330)
T ss_dssp             ECCC
T ss_pred             cCCC
Confidence            8763

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.84  E-value=1.4e-20  Score=169.04  Aligned_cols=209  Identities=15%  Similarity=0.117  Sum_probs=148.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---C---CeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            8 YAVVTGANKGIGYEVVRQLALN---G---IITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~---g---~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++|||||+|+||++++++|+++   |   ++|++++|+... ..+..+.+.  ...++.++.+|++|.+++.+++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD--ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT--TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc--cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6999999999999999999997   8   999999986421 111111121  1246889999999999888776     


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                        .++|+|||+||.....                    .+.+++++.+++|+.++.++++++.+.    ..++||++||.
T Consensus        75 --~~~d~Vih~A~~~~~~--------------------~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~  128 (337)
T 1r6d_A           75 --RGVDAIVHFAAESHVD--------------------RSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTN  128 (337)
T ss_dssp             --TTCCEEEECCSCCCHH--------------------HHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEG
T ss_pred             --cCCCEEEECCCccCch--------------------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecch
Confidence              3799999999975210                    134567889999999999999999654    45799999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+.....                               .+..+.. .+.+...|+.+|++.+.+++.++.++ +++++.
T Consensus       129 ~vyg~~~~-------------------------------~~~~E~~-~~~~~~~Y~~sK~~~e~~~~~~~~~~-g~~~~i  175 (337)
T 1r6d_A          129 QVYGSIDS-------------------------------GSWTESS-PLEPNSPYAASKAGSDLVARAYHRTY-GLDVRI  175 (337)
T ss_dssp             GGGCCCSS-------------------------------SCBCTTS-CCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred             HHhCCCCC-------------------------------CCCCCCC-CCCCCCchHHHHHHHHHHHHHHHHHH-CCCEEE
Confidence            54321100                               0000000 01245789999999999999998876 899999


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      +.||.+.++.....                          ....++|+|+.++.++..+.   .|..|...
T Consensus       176 lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~v~  243 (337)
T 1r6d_A          176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR---AGEIYHIG  243 (337)
T ss_dssp             EEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEEC
T ss_pred             EEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC---CCCEEEeC
Confidence            99999988764210                          12357889998888876532   45444443

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.84  E-value=3.5e-20  Score=156.24  Aligned_cols=196  Identities=13%  Similarity=0.090  Sum_probs=134.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+++|++|++++|++++....    .    ..+.++.+|++|.++  +       .+.++|+
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~----~~~~~~~~D~~d~~~--~-------~~~~~d~   64 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT----H----KDINILQKDIFDLTL--S-------DLSDQNV   64 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH----C----SSSEEEECCGGGCCH--H-------HHTTCSE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc----c----CCCeEEeccccChhh--h-------hhcCCCE
Confidence            599999999999999999999999999999997654432    1    358899999999887  2       2347999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+||....                             ...+|+.++..+++++    ++.+.+++|++||..+..+..
T Consensus        65 vi~~ag~~~~-----------------------------~~~~~~~~~~~l~~a~----~~~~~~~~v~~SS~~~~~~~~  111 (221)
T 3ew7_A           65 VVDAYGISPD-----------------------------EAEKHVTSLDHLISVL----NGTVSPRLLVVGGAASLQIDE  111 (221)
T ss_dssp             EEECCCSSTT-----------------------------TTTSHHHHHHHHHHHH----CSCCSSEEEEECCCC------
T ss_pred             EEECCcCCcc-----------------------------ccchHHHHHHHHHHHH----HhcCCceEEEEecceEEEcCC
Confidence            9999997310                             1445666666666665    666678999999987765431


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      ...           ...+                    +..+.+...|+.+|.+.+.+. .+..+..+++++.+.||++.
T Consensus       112 ~~~-----------~~~~--------------------~~~~~~~~~y~~~k~~~e~~~-~~~~~~~gi~~~ivrp~~v~  159 (221)
T 3ew7_A          112 DGN-----------TLLE--------------------SKGLREAPYYPTARAQAKQLE-HLKSHQAEFSWTYISPSAMF  159 (221)
T ss_dssp             --------------------------------------------CCCSCCHHHHHHHHH-HHHTTTTTSCEEEEECSSCC
T ss_pred             CCc-----------cccc--------------------cCCCCCHHHHHHHHHHHHHHH-HHHhhccCccEEEEeCccee
Confidence            000           0000                    000012356999999999973 34432468999999999998


Q ss_pred             cCcccC----------------CCCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          248 TEMTYN----------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       248 T~~~~~----------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ++....                ...++++|+|+.++..+..+.  ..|+.|...+.
T Consensus       160 g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~~~~  213 (221)
T 3ew7_A          160 EPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN--HLNEHFTVAGK  213 (221)
T ss_dssp             CCC---------------------CCCHHHHHHHHHHHHHSCS--CTTSEEECCC-
T ss_pred             cCCCccCceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc--ccCCEEEECCC
Confidence            862111                125789999999999998776  55666665554

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.84  E-value=1.4e-20  Score=169.19  Aligned_cols=214  Identities=13%  Similarity=0.030  Sum_probs=149.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~   84 (290)
                      +++|||||+|+||++++++|+++ |++|++++|+..+.+...      ....+.++.+|+++. +.+.++++       +
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~-------~   67 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK-------K   67 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH-------H
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------cCCCeEEEeccccCcHHHHHhhcc-------C
Confidence            47999999999999999999998 899999999876543211      123588999999984 56766665       4


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+||...+..                    ..+++++.+++|+.++.++++++.+    .+ ++||++||...+.
T Consensus        68 ~d~vih~A~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g  122 (345)
T 2bll_A           68 CDVVLPLVAIATPIE--------------------YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYG  122 (345)
T ss_dssp             CSEEEECBCCCCHHH--------------------HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGB
T ss_pred             CCEEEEcccccCccc--------------------hhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcC
Confidence            799999999753110                    2346778999999999999998843    34 7999999975432


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC--CCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP--ANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      .....    ..                       .+..+.....|  .+...|+.+|++.+.+++.++.+. +++++.+.
T Consensus       123 ~~~~~----~~-----------------------~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~ilr  174 (345)
T 2bll_A          123 MCSDK----YF-----------------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFR  174 (345)
T ss_dssp             TCCCS----SB-----------------------CTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred             CCCCC----Cc-----------------------CCcccccccCcccCcccccHHHHHHHHHHHHHHHHhc-CCCEEEEc
Confidence            21000    00                       00000000000  234589999999999999998776 89999999


Q ss_pred             cceeecCcccC----------------------C------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          243 PGYVKTEMTYN----------------------A------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       243 PG~v~T~~~~~----------------------~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ||.+.++....                      .            ....++|+|+.++.++..+.....|..|...+
T Consensus       175 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~  252 (345)
T 2bll_A          175 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN  252 (345)
T ss_dssp             ECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCC
Confidence            99998775321                      0            12467899999988887654334555555443

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=2.7e-20  Score=169.70  Aligned_cols=209  Identities=13%  Similarity=-0.003  Sum_probs=142.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-----HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-----GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++|||||+|+||++++++|+++|++|++++|+...     ++...+.+.......+.++.+|++|.+++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998653     111111110001235888999999999999998875   


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+||.....                    .+.+++++.+++|+.++.++++++.+... ...++||++||..
T Consensus       102 --~~d~vih~A~~~~~~--------------------~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~  158 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHVK--------------------ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSE  158 (375)
T ss_dssp             --CCSEEEECCSCCCHH--------------------HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGG
T ss_pred             --CCCEEEECCCccccc--------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchh
Confidence              699999999975210                    13467888999999999999999976543 1237999999976


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      .+.....                               .+..+. ..+.+...|+.+|++.+.+++.++.++ ++.+..+
T Consensus       159 ~~~~~~~-------------------------------~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~  205 (375)
T 1t2a_A          159 LYGKVQE-------------------------------IPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAY-NLFAVNG  205 (375)
T ss_dssp             GTCSCSS-------------------------------SSBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEE
T ss_pred             hhCCCCC-------------------------------CCCCcc-CCCCCCChhHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence            5432100                               000000 001235689999999999999999876 5555555


Q ss_pred             ecceeecCccc-----------------C-------------CCCCChhhhccchhhhhhccC
Q 039097          242 CPGYVKTEMTY-----------------N-------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       242 ~PG~v~T~~~~-----------------~-------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .|+.+..|...                 .             ......+|+|+.++.++..+.
T Consensus       206 r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~~  268 (375)
T 1t2a_A          206 ILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQNDE  268 (375)
T ss_dssp             EECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSSS
T ss_pred             ecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcCC
Confidence            54433322100                 0             123467888888888776543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.84  E-value=2.5e-20  Score=170.51  Aligned_cols=205  Identities=16%  Similarity=0.073  Sum_probs=147.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +++++|||||+|+||++++++|+++|++|++++|+..+....    .   ...+.++.+|++|.+++.++++       +
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~---~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----D---MFCDEFHLVDLRVMENCLKVTE-------G   93 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----G---GTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----c---cCCceEEECCCCCHHHHHHHhC-------C
Confidence            467999999999999999999999999999999987553211    0   1257889999999999888775       6


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+||......                   .+.+++++.+++|+.++.++++++.    +.+.++||++||...+.
T Consensus        94 ~d~Vih~A~~~~~~~-------------------~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~  150 (379)
T 2c5a_A           94 VDHVFNLAADMGGMG-------------------FIQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYP  150 (379)
T ss_dssp             CSEEEECCCCCCCHH-------------------HHTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSC
T ss_pred             CCEEEECceecCccc-------------------ccccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeC
Confidence            999999999753110                   0135678899999999999999984    34457999999975443


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCC-CCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKG-WPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .....      ..+.....                    +.+. ...+...|+.+|++.+.+++.++.++ +++++.+.|
T Consensus       151 ~~~~~------~~~~~~~~--------------------E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gi~~~ilrp  203 (379)
T 2c5a_A          151 EFKQL------ETTNVSLK--------------------ESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GIECRIGRF  203 (379)
T ss_dssp             GGGSS------SSSSCEEC--------------------GGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEE
T ss_pred             CCCCC------CccCCCcC--------------------cccCCCCCCCChhHHHHHHHHHHHHHHHHHH-CCCEEEEEe
Confidence            21000      00000000                    0000 01234689999999999999998876 899999999


Q ss_pred             ceeecCcccC------------------C-------------CCCChhhhccchhhhhhcc
Q 039097          244 GYVKTEMTYN------------------A-------------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       244 G~v~T~~~~~------------------~-------------~~~~~e~~a~~~~~l~~~~  273 (290)
                      |.+.++....                  .             ....++|+|+.++.++..+
T Consensus       204 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  264 (379)
T 2c5a_A          204 HNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSD  264 (379)
T ss_dssp             CCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHHSS
T ss_pred             CceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHhhcc
Confidence            9998875321                  0             1234788888888887644

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.83  E-value=1.3e-20  Score=169.52  Aligned_cols=205  Identities=14%  Similarity=0.082  Sum_probs=147.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCC-------CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNG-------IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g-------~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      .++++++|||||+|+||++++++|+++|       ++|++++|+......       ....++.++.+|++|.+++.+++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~   83 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------GFSGAVDARAADLSAPGEAEKLV   83 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------TCCSEEEEEECCTTSTTHHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------ccCCceeEEEcCCCCHHHHHHHH
Confidence            4678999999999999999999999999       899999998654321       12246888999999999988887


Q ss_pred             HHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeE
Q 039097           76 DFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARI  154 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~i  154 (290)
                      +      +++|+|||+||....                     .+.+++++.+++|+.++.++++++.+...+. ..++|
T Consensus        84 ~------~~~d~vih~A~~~~~---------------------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~i  136 (342)
T 2hrz_A           84 E------ARPDVIFHLAAIVSG---------------------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRV  136 (342)
T ss_dssp             H------TCCSEEEECCCCCHH---------------------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred             h------cCCCEEEECCccCcc---------------------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEE
Confidence            5      379999999997520                     1457788999999999999999997643221 24799


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-  233 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-  233 (290)
                      |++||...+.....                               .+..+. ..+.+...|+.+|++.+.+++.++.+. 
T Consensus       137 v~~SS~~~~~~~~~-------------------------------~~~~E~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  184 (342)
T 2hrz_A          137 VFTSSIAVFGAPLP-------------------------------YPIPDE-FHTTPLTSYGTQKAICELLLSDYSRRGF  184 (342)
T ss_dssp             EEEEEGGGCCSSCC-------------------------------SSBCTT-CCCCCSSHHHHHHHHHHHHHHHHHHTTS
T ss_pred             EEeCchHhhCCCCC-------------------------------CCcCCC-CCCCCcchHHHHHHHHHHHHHHHHHhcC
Confidence            99999865432100                               000000 011245789999999999999998775 


Q ss_pred             ---CCeEEEEee--cceeecCccc-----------CC------------CCCChhhhccchhhhhhcc
Q 039097          234 ---PNFCINCVC--PGYVKTEMTY-----------NA------------GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       234 ---~~i~vn~v~--PG~v~T~~~~-----------~~------------~~~~~e~~a~~~~~l~~~~  273 (290)
                         ..+|++.+.  ||.+.++...           ..            ....++++++.++.++..+
T Consensus       185 ~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~  252 (342)
T 2hrz_A          185 FDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMID  252 (342)
T ss_dssp             CEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSC
T ss_pred             CCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhcc
Confidence               246777776  8875543210           00            0246788888888877644

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.83  E-value=1.5e-19  Score=160.64  Aligned_cols=190  Identities=17%  Similarity=0.144  Sum_probs=141.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++++|||||+|+||++++++|+++|++|++++|++....  .+        .+.++.+|++ .+++.++++       ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~--------~~~~~~~Dl~-~~~~~~~~~-------~~   63 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN--------DYEYRVSDYT-LEDLINQLN-------DV   63 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------CCEEEECCCC-HHHHHHHTT-------TC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC--------ceEEEEcccc-HHHHHHhhc-------CC
Confidence            478999999999999999999999999999999944322  21        4889999999 888877766       79


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||.....                        +..+.+++|+.++.++++++    ++.+.+++|++||...+..
T Consensus        64 d~Vih~a~~~~~~------------------------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~  115 (311)
T 3m2p_A           64 DAVVHLAATRGSQ------------------------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSD  115 (311)
T ss_dssp             SEEEECCCCCCSS------------------------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCC
T ss_pred             CEEEEccccCCCC------------------------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCC
Confidence            9999999986421                        34568899999999999998    4445679999999654332


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ...                               .+..+. ..+.+...|+.+|.+.+.+++.++.+. +++++.+.||.
T Consensus       116 ~~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~-g~~~~ilRp~~  162 (311)
T 3m2p_A          116 ETS-------------------------------LPWNEK-ELPLPDLMYGVSKLACEHIGNIYSRKK-GLCIKNLRFAH  162 (311)
T ss_dssp             GGG-------------------------------CSBCTT-SCCCCSSHHHHHHHHHHHHHHHHHHHS-CCEEEEEEECE
T ss_pred             CCC-------------------------------CCCCCC-CCCCCCchhHHHHHHHHHHHHHHHHHc-CCCEEEEeeCc
Confidence            100                               000000 011245789999999999999998875 89999999999


Q ss_pred             eecCcccCC--------------------------CCCChhhhccchhhhhhccC
Q 039097          246 VKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       246 v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.++.....                          .....+|+|+.++.++..+.
T Consensus       163 v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~  217 (311)
T 3m2p_A          163 LYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK  217 (311)
T ss_dssp             EECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred             eeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence            988754410                          12466799999888877554

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.83  E-value=5.6e-20  Score=180.96  Aligned_cols=191  Identities=18%  Similarity=0.148  Sum_probs=134.5

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|++|||||+|+||++++++|+++|++|++++|+.....+..+.+.......+.++.+|+++.+++.+++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            45778999999999999999999999999999999998655433333333222235788999999999998888753   


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+||......                    ..+...+.+++|+.++.++++++.    +.+.++||++||..
T Consensus        84 --~~D~Vih~A~~~~~~~--------------------~~~~~~~~~~~Nv~gt~~ll~a~~----~~~~~~iV~~SS~~  137 (699)
T 1z45_A           84 --KIDSVIHFAGLKAVGE--------------------STQIPLRYYHNNILGTVVLLELMQ----QYNVSKFVFSSSAT  137 (699)
T ss_dssp             --CCCEEEECCSCCCHHH--------------------HHHSHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGG
T ss_pred             --CCCEEEECCcccCcCc--------------------cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEECcHH
Confidence              7999999999753110                    123346789999999999998774    34457999999975


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~  240 (290)
                      .+.......                           ...+..+. ..+.+...|+.+|++.+.+++.++.+. .++++..
T Consensus       138 vyg~~~~~~---------------------------~~~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~i  189 (699)
T 1z45_A          138 VYGDATRFP---------------------------NMIPIPEE-CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAI  189 (699)
T ss_dssp             GGCCGGGST---------------------------TCCSBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEE
T ss_pred             HhCCCcccc---------------------------ccCCcccc-CCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEE
Confidence            432110000                           00000000 001234689999999999999999886 6899988


Q ss_pred             eecceeecC
Q 039097          241 VCPGYVKTE  249 (290)
Q Consensus       241 v~PG~v~T~  249 (290)
                      +.|+.+..+
T Consensus       190 lR~~~vyG~  198 (699)
T 1z45_A          190 LRYFNPIGA  198 (699)
T ss_dssp             EEECEEECC
T ss_pred             EEeccccCC
Confidence            888777654

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.83  E-value=5.6e-20  Score=164.82  Aligned_cols=206  Identities=14%  Similarity=0.021  Sum_probs=144.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++++|||||+|+||++++++|+++|++|++++|+..... ...+.+.  ....+.++.+|++|.+++.++++.+     
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG--IEGDIQYEDGDMADACSVQRAVIKA-----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT--CGGGEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc--ccCceEEEECCCCCHHHHHHHHHHc-----
Confidence            4789999999999999999999999999999999876421 1222221  1235889999999999999988865     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLG  162 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g  162 (290)
                      ++|+|||+||.....                    .+.+++++.+++|+.++.++++++.+.    + .++||++||...
T Consensus        86 ~~d~Vih~A~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v  141 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVG--------------------ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEM  141 (335)
T ss_dssp             CCSEEEECCSCCCHH--------------------HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGG
T ss_pred             CCCEEEECccccchh--------------------hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHH
Confidence            789999999964210                    023567889999999999999998543    3 379999999755


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      +.....                               .+..+. ..+.+...|+.+|++.+.+++.++.++ ++.+..+.
T Consensus       142 ~g~~~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~i~r  188 (335)
T 1rpn_A          142 FGLIQA-------------------------------ERQDEN-TPFYPRSPYGVAKLYGHWITVNYRESF-GLHASSGI  188 (335)
T ss_dssp             GCSCSS-------------------------------SSBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEE
T ss_pred             hCCCCC-------------------------------CCCCcc-cCCCCCChhHHHHHHHHHHHHHHHHHc-CCcEEEEe
Confidence            432100                               000000 001234689999999999999998776 56666666


Q ss_pred             cceeecCcccC------------------------------CCCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYN------------------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~------------------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+.+..|....                              ......+|+|+.++.++..+.
T Consensus       189 ~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~  250 (335)
T 1rpn_A          189 LFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK  250 (335)
T ss_dssp             ECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS
T ss_pred             eCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC
Confidence            66655442110                              012356888888888876543

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.83  E-value=1.9e-19  Score=169.72  Aligned_cols=189  Identities=15%  Similarity=0.107  Sum_probs=131.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC---CCeEEEEecCcccHHHHHHHHHhc---------------CCCcEEEEEee
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALN---GIITVLTARDEKGGLEAVEKLKHS---------------GFDNVIFHQLD   64 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~---g~~Vi~~~r~~~~~~~~~~~l~~~---------------~~~~~~~~~~D   64 (290)
                      ..++|+||||||+|+||++++++|+++   |++|++++|+..... ..+.+...               ...++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDED-ARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHH-HHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHH-HHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            356899999999999999999999999   899999999876542 22232221               12479999999


Q ss_pred             CC------CHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHH
Q 039097           65 VA------DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRM  138 (290)
Q Consensus        65 l~------~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l  138 (290)
                      ++      +.+++.++++       ++|+|||+||....                        +.+++.+++|+.++.++
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------------------------~~~~~~~~~Nv~gt~~l  197 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------------------------FPYHELFGPNVAGTAEL  197 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------------------------SSCCEEHHHHHHHHHHH
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------------------------cCHHHHHHHHHHHHHHH
Confidence            98      5566666665       58999999998632                        33457899999999999


Q ss_pred             HHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhh
Q 039097          139 CEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILS  218 (290)
Q Consensus       139 ~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~s  218 (290)
                      ++.+..    .+.++||++||.........      ...+.    .....+.         .+.  ..........|+.|
T Consensus       198 l~aa~~----~~~~~~V~iSS~~v~~~~~~------~~~~E----~~~~~p~---------~~~--~~~~~~~~~~Y~~s  252 (478)
T 4dqv_A          198 IRIALT----TKLKPFTYVSTADVGAAIEP------SAFTE----DADIRVI---------SPT--RTVDGGWAGGYGTS  252 (478)
T ss_dssp             HHHHTS----SSCCCEEEEEEGGGGTTSCT------TTCCS----SSCHHHH---------CCE--EECCTTSEECHHHH
T ss_pred             HHHHHh----CCCCeEEEEeehhhcCccCC------CCcCC----ccccccc---------Ccc--cccccccccchHHH
Confidence            999843    44569999999754321100      00000    0000000         000  00000112569999


Q ss_pred             HHHHHHHHHHHHhhCCCeEEEEeecceeecC
Q 039097          219 KAAMNAYTRILAKKYPNFCINCVCPGYVKTE  249 (290)
Q Consensus       219 Kaa~~~~~~~la~e~~~i~vn~v~PG~v~T~  249 (290)
                      |.+.+.+++.++.+. +++++.+.||.|.++
T Consensus       253 K~~~E~~~~~~~~~~-gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          253 KWAGEVLLREANDLC-ALPVAVFRCGMILAD  282 (478)
T ss_dssp             HHHHHHHHHHHHHHH-CCCEEEEEECEEECC
T ss_pred             HHHHHHHHHHHHHHh-CCCeEEEECceeeCC
Confidence            999999999998766 899999999999875

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.82  E-value=1.1e-19  Score=166.14  Aligned_cols=211  Identities=18%  Similarity=0.065  Sum_probs=145.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-----HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-----GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|++|||||+|+||++++++|+++|++|++++|+..+     ++...+.+.......+.++.+|++|.+++.++++.+  
T Consensus        28 ~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--  105 (381)
T 1n7h_A           28 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--  105 (381)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc--
Confidence            3789999999999999999999999999999998654     222111111111115888999999999999998875  


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc-CCCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~-~~~~~iV~isS  159 (290)
                         ++|+|||+||.....                    .+.+++++.+++|+.++.++++++.+...+ ...++||++||
T Consensus       106 ---~~d~Vih~A~~~~~~--------------------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS  162 (381)
T 1n7h_A          106 ---KPDEVYNLAAQSHVA--------------------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS  162 (381)
T ss_dssp             ---CCSEEEECCSCCCHH--------------------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred             ---CCCEEEECCcccCcc--------------------ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCc
Confidence               789999999975311                    135678899999999999999999887643 23469999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC-----
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP-----  234 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~-----  234 (290)
                      ...+.....                                +..+. ..+.+...|+.+|++.+.+++.++.++.     
T Consensus       163 ~~vyg~~~~--------------------------------~~~E~-~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~  209 (381)
T 1n7h_A          163 SEMFGSTPP--------------------------------PQSET-TPFHPRSPYAASKCAAHWYTVNYREAYGLFACN  209 (381)
T ss_dssp             GGGGTTSCS--------------------------------SBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEE
T ss_pred             HHHhCCCCC--------------------------------CCCCC-CCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEE
Confidence            765432100                                00000 0012357899999999999999988762     


Q ss_pred             CeEEEEeecceeecCc--------------------cc----CCCCCChhhhccchhhhhhccC
Q 039097          235 NFCINCVCPGYVKTEM--------------------TY----NAGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~--------------------~~----~~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ...++.+.||...+.+                    ..    ......++|+|+.+++++..+.
T Consensus       210 ~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~  273 (381)
T 1n7h_A          210 GILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQEK  273 (381)
T ss_dssp             EEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSSS
T ss_pred             EEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCCC
Confidence            1122556665432210                    00    0123578999999988877544

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.82  E-value=6.4e-20  Score=162.75  Aligned_cols=173  Identities=13%  Similarity=0.052  Sum_probs=131.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++++|||||+|+||++++++|+++  |++|++++|+..+.. ..        ..+.++.+|++|.+++.+++++.     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--------~~~~~~~~D~~d~~~~~~~~~~~-----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--------NSGPFEVVNALDFNQIEHLVEVH-----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--------HSSCEEECCTTCHHHHHHHHHHT-----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--------CCCceEEecCCCHHHHHHHHhhc-----
Confidence            578999999999999999999999  899999999876532 11        13678899999999998888753     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||+||.....                     ..+++++.+++|+.++.++++++.+    .+.+++|++||...+
T Consensus        68 ~~d~vih~a~~~~~~---------------------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~  122 (312)
T 2yy7_A           68 KITDIYLMAALLSAT---------------------AEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVF  122 (312)
T ss_dssp             TCCEEEECCCCCHHH---------------------HHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGC
T ss_pred             CCCEEEECCccCCCc---------------------hhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHh
Confidence            799999999964210                     2356788999999999999999843    445799999998654


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ......                              .+..+. ..+.+...|+.+|++.+.+++.++.++ +++++.+.|
T Consensus       123 ~~~~~~------------------------------~~~~e~-~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lrp  170 (312)
T 2yy7_A          123 GPTTPK------------------------------ENTPQY-TIMEPSTVYGISKQAGERWCEYYHNIY-GVDVRSIRY  170 (312)
T ss_dssp             CTTSCS------------------------------SSBCSS-CBCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEECEEE
T ss_pred             CCCCCC------------------------------CCcccc-CcCCCCchhHHHHHHHHHHHHHHHHhc-CCcEEEEeC
Confidence            321000                              000000 001235689999999999999998776 899999999


Q ss_pred             ceeecC
Q 039097          244 GYVKTE  249 (290)
Q Consensus       244 G~v~T~  249 (290)
                      |.+..+
T Consensus       171 ~~v~g~  176 (312)
T 2yy7_A          171 PGLISW  176 (312)
T ss_dssp             CEEECS
T ss_pred             CeEecC
Confidence            998874

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.81  E-value=2e-19  Score=175.99  Aligned_cols=217  Identities=12%  Similarity=0.032  Sum_probs=152.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHH-HHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA-IHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~   81 (290)
                      ++++++|||||+|+||++++++|+++ |++|++++|+..+....    .  ....+.++.+|+++.++ +.++++     
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~----~--~~~~v~~v~~Dl~d~~~~~~~~~~-----  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF----L--NHPHFHFVEGDISIHSEWIEYHVK-----  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG----T--TCTTEEEEECCTTTCHHHHHHHHH-----
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh----c--cCCceEEEECCCCCcHHHHHHhhc-----
Confidence            56889999999999999999999998 89999999987654321    1  12368899999999765 555555     


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+||......                    ..+++++.+++|+.++.++++++.+    .+ +++|++||..
T Consensus       382 --~~D~Vih~Aa~~~~~~--------------------~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~  434 (660)
T 1z7e_A          382 --KCDVVLPLVAIATPIE--------------------YTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSE  434 (660)
T ss_dssp             --HCSEEEECCCCCCTHH--------------------HHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGG
T ss_pred             --CCCEEEECceecCccc--------------------cccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHH
Confidence              5899999999753110                    2356678999999999999999854    34 8999999976


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCC--CCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPE--TKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      .+......    ..                       .+..+.  ......+...|+.||.+.+.+++.++.+. +++++
T Consensus       435 vyg~~~~~----~~-----------------------~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~-gi~~~  486 (660)
T 1z7e_A          435 VYGMCSDK----YF-----------------------DEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFT  486 (660)
T ss_dssp             GGBTCCSS----SB-----------------------CTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_pred             HcCCCCCc----cc-----------------------CCCccccccCcccCCCCCcHHHHHHHHHHHHHHHHHc-CCCEE
Confidence            54321000    00                       000000  00000234589999999999999998776 89999


Q ss_pred             EeecceeecCcccC----------------------C------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          240 CVCPGYVKTEMTYN----------------------A------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       240 ~v~PG~v~T~~~~~----------------------~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+.||.+.++....                      .            ....++|+|+.+++++..+.....|.+|..+
T Consensus       487 ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~  566 (660)
T 1z7e_A          487 LFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG  566 (660)
T ss_dssp             EEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEEC
T ss_pred             EECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEEC
Confidence            99999998876421                      0            1235789999988888765433456666554


Q ss_pred             c
Q 039097          286 E  286 (290)
Q Consensus       286 ~  286 (290)
                      +
T Consensus       567 ~  567 (660)
T 1z7e_A          567 N  567 (660)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.80  E-value=5.1e-20  Score=162.12  Aligned_cols=179  Identities=18%  Similarity=0.177  Sum_probs=130.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      -+++|||||+|+||++++++|+++|++|++++|+                      .+|++|.+++.++++.+     ++
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~Dl~d~~~~~~~~~~~-----~~   64 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ----------------------DLDITNVLAVNKFFNEK-----KP   64 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT----------------------TCCTTCHHHHHHHHHHH-----CC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc----------------------cCCCCCHHHHHHHHHhc-----CC
Confidence            4689999999999999999999999999999996                      27999999999888764     79


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||.....                    .+.+++++.+++|+.++.++++++.+    .+. +||++||...+..
T Consensus        65 d~vih~A~~~~~~--------------------~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~  119 (292)
T 1vl0_A           65 NVVINCAAHTAVD--------------------KCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDG  119 (292)
T ss_dssp             SEEEECCCCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCS
T ss_pred             CEEEECCccCCHH--------------------HHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECC
Confidence            9999999975210                    13567889999999999999999965    233 9999999865432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ...                               .+..+. ..+.+...|+.+|++.+.+++.++.+     +..+.|+.
T Consensus       120 ~~~-------------------------------~~~~E~-~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~~lR~~~  162 (292)
T 1vl0_A          120 EAK-------------------------------EPITEF-DEVNPQSAYGKTKLEGENFVKALNPK-----YYIVRTAW  162 (292)
T ss_dssp             CCS-------------------------------SCBCTT-SCCCCCSHHHHHHHHHHHHHHHHCSS-----EEEEEECS
T ss_pred             CCC-------------------------------CCCCCC-CCCCCccHHHHHHHHHHHHHHhhCCC-----eEEEeeee
Confidence            100                               000000 00123468999999999999988764     44455555


Q ss_pred             eecC---cccC------------------CCCCChhhhccchhhhhhcc
Q 039097          246 VKTE---MTYN------------------AGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       246 v~T~---~~~~------------------~~~~~~e~~a~~~~~l~~~~  273 (290)
                      +.++   +...                  .....++|+|+.+++++..+
T Consensus       163 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  211 (292)
T 1vl0_A          163 LYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK  211 (292)
T ss_dssp             EESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT
T ss_pred             eeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC
Confidence            5433   1000                  12346899999999888764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.79  E-value=1.8e-18  Score=154.12  Aligned_cols=171  Identities=15%  Similarity=0.141  Sum_probs=126.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |+++++|||||+|+||++++++|+++|++|++++|+.                     .+|++|.+++.+++++.     
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------cCCccCHHHHHHHHHhc-----
Confidence            3468999999999999999999999999999988763                     27999999998888764     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||+||......                   ...++.++.+++|+.++.++++++.+    .+.+++|++||...+
T Consensus        55 ~~d~vih~a~~~~~~~-------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vy  111 (321)
T 1e6u_A           55 RIDQVYLAAAKVGGIV-------------------ANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIY  111 (321)
T ss_dssp             CCSEEEECCCCCCCHH-------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGS
T ss_pred             CCCEEEEcCeecCCcc-------------------hhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHc
Confidence            7999999999752100                   03456678899999999999999854    345799999997654


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ......      ..+.                     .........+....|+.+|.+.+.+++.++.++ +++++.+.|
T Consensus       112 g~~~~~------~~~E---------------------~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilrp  163 (321)
T 1e6u_A          112 PKLAKQ------PMAE---------------------SELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRDYRSVMP  163 (321)
T ss_dssp             CTTCCS------SBCG---------------------GGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEE
T ss_pred             CCCCCC------CcCc---------------------cccccCCCCCCCCccHHHHHHHHHHHHHHHHHh-CCCEEEEEe
Confidence            321000      0000                     000000000223589999999999999998776 899999999


Q ss_pred             ceeecCcc
Q 039097          244 GYVKTEMT  251 (290)
Q Consensus       244 G~v~T~~~  251 (290)
                      |.+.++..
T Consensus       164 ~~v~G~~~  171 (321)
T 1e6u_A          164 TNLYGPHD  171 (321)
T ss_dssp             CEEESTTC
T ss_pred             CCcCCcCC
Confidence            99988754

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.79  E-value=3.2e-19  Score=160.74  Aligned_cols=204  Identities=17%  Similarity=0.070  Sum_probs=138.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..++++++|||||+|+||++++++|+++|++|++++|+.....+..+.+.  ...++.++.+|+++..            
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~------------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPL------------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCC------------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChh------------
Confidence            45678999999999999999999999999999999997543222111111  1236889999998852            


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +.++|+|||+||......                    ..+++++.+++|+.++.++++++.+.    + .++|++||..
T Consensus        89 ~~~~d~vih~A~~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~  143 (343)
T 2b69_A           89 YIEVDQIYHLASPASPPN--------------------YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSE  143 (343)
T ss_dssp             CCCCSEEEECCSCCSHHH--------------------HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGG
T ss_pred             hcCCCEEEECccccCchh--------------------hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHH
Confidence            457999999999753110                    12345678999999999999998542    3 4999999975


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      .+......    ..  +                     +..........+...|+.+|++.+.+++.++.+. +++++.+
T Consensus       144 v~g~~~~~----~~--~---------------------E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~il  195 (343)
T 2b69_A          144 VYGDPEVH----PQ--S---------------------EDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEVRVA  195 (343)
T ss_dssp             GGBSCSSS----SB--C---------------------TTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEE
T ss_pred             HhCCCCCC----CC--c---------------------ccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh-CCcEEEE
Confidence            43211000    00  0                     0000000001235789999999999999998776 8999999


Q ss_pred             ecceeecCcccC----------------------------CCCCChhhhccchhhhhhc
Q 039097          242 CPGYVKTEMTYN----------------------------AGRLTVEEGAESPVWLALL  272 (290)
Q Consensus       242 ~PG~v~T~~~~~----------------------------~~~~~~e~~a~~~~~l~~~  272 (290)
                      .||.+.++....                            .....++|+|+.++.++..
T Consensus       196 rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  254 (343)
T 2b69_A          196 RIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS  254 (343)
T ss_dssp             EECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTS
T ss_pred             EEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhc
Confidence            999998875321                            0123678888888877654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.79  E-value=4.4e-19  Score=155.70  Aligned_cols=179  Identities=20%  Similarity=0.161  Sum_probs=134.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +++|||||+|+||++++++|+++|++|++++|.                      .+|++|.+++.+++++.     ++|
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            489999999999999999999999999999992                      38999999999998875     799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||.....                    .+.+++++.+++|+.++.++++++.+    .+ .++|++||...+...
T Consensus        59 ~vi~~a~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~  113 (287)
T 3sc6_A           59 IIIHCAAYTKVD--------------------QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGD  113 (287)
T ss_dssp             EEEECCCCCCHH--------------------HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCC
T ss_pred             EEEECCcccChH--------------------HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCC
Confidence            999999976311                    02356788999999999999999954    23 489999998654321


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..                               .+..+. ..+.+...|+.+|.+.+.+++.++.+     +..+.||.+
T Consensus       114 ~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~ilR~~~v  156 (287)
T 3sc6_A          114 RP-------------------------------EGYDEF-HNPAPINIYGASKYAGEQFVKELHNK-----YFIVRTSWL  156 (287)
T ss_dssp             CS-------------------------------SCBCTT-SCCCCCSHHHHHHHHHHHHHHHHCSS-----EEEEEECSE
T ss_pred             CC-------------------------------CCCCCC-CCCCCCCHHHHHHHHHHHHHHHhCCC-----cEEEeeeee
Confidence            00                               000000 01124578999999999999988763     467888888


Q ss_pred             ecCcccCC----------------------CCCChhhhccchhhhhhccC
Q 039097          247 KTEMTYNA----------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       247 ~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      .++.....                      ....++|+|+.+++++..+.
T Consensus       157 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~  206 (287)
T 3sc6_A          157 YGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL  206 (287)
T ss_dssp             ECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC
T ss_pred             cCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC
Confidence            77643221                      13458999999999887654

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.79  E-value=3.4e-19  Score=155.05  Aligned_cols=182  Identities=18%  Similarity=0.137  Sum_probs=132.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+ +|++|++++|++...          .  .   +.+|++|.+++.++++.+     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~----------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~   60 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ----------G--G---YKLDLTDFPRLEDFIIKK-----RPDV   60 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT----------T--C---EECCTTSHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC----------C--C---ceeccCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999 589999999987421          1  1   889999999999998865     6999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      ||||||.....                    .+.+++++.+++|+.++.++++++.+    .+ ++||++||..++.+..
T Consensus        61 vi~~a~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~  115 (273)
T 2ggs_A           61 IINAAAMTDVD--------------------KCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEK  115 (273)
T ss_dssp             EEECCCCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSS
T ss_pred             EEECCcccChh--------------------hhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCC
Confidence            99999975311                    13567889999999999999999954    33 5999999987654320


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                                +..+. ..+.+...|+.+|++.+.+++.  .+...+|++.|. |  .
T Consensus       116 ~--------------------------------~~~e~-~~~~~~~~Y~~sK~~~e~~~~~--~~~~~iR~~~v~-G--~  157 (273)
T 2ggs_A          116 G--------------------------------NYKEE-DIPNPINYYGLSKLLGETFALQ--DDSLIIRTSGIF-R--N  157 (273)
T ss_dssp             C--------------------------------SBCTT-SCCCCSSHHHHHHHHHHHHHCC--TTCEEEEECCCB-S--S
T ss_pred             C--------------------------------CcCCC-CCCCCCCHHHHHHHHHHHHHhC--CCeEEEeccccc-c--c
Confidence            0                                00000 0012346899999999999987  333456666665 3  2


Q ss_pred             cCcc--------c---------CCCCCChhhhccchhhhhhcc
Q 039097          248 TEMT--------Y---------NAGRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       248 T~~~--------~---------~~~~~~~e~~a~~~~~l~~~~  273 (290)
                      +++.        .         ......++|+|+.+++++..+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          158 KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR  200 (273)
T ss_dssp             SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence            2211        0         113467899999999998764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=7.2e-19  Score=156.40  Aligned_cols=167  Identities=17%  Similarity=0.136  Sum_probs=125.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++|||||+|+||++++++|+++  |++|++++|+.....            .+.++.+|++|.+++.+++++     .++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~------------~~~~~~~D~~d~~~~~~~~~~-----~~~   63 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG------------GIKFITLDVSNRDEIDRAVEK-----YSI   63 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT------------TCCEEECCTTCHHHHHHHHHH-----TTC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc------------CceEEEecCCCHHHHHHHHhh-----cCC
Confidence            4899999999999999999999  899999998765421            256789999999999888875     279


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||....                     ...+++++.+++|+.++.++++++.+    .+.+++|++||...+..
T Consensus        64 d~vih~a~~~~~---------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~  118 (317)
T 3ajr_A           64 DAIFHLAGILSA---------------------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGP  118 (317)
T ss_dssp             CEEEECCCCCHH---------------------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCT
T ss_pred             cEEEECCcccCC---------------------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCC
Confidence            999999997421                     02356788999999999999999853    45579999999866432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ....                              .+..+ +..+.+...|+.+|++.+.+++.++.++ +++++.+.|+.
T Consensus       119 ~~~~------------------------------~~~~e-~~~~~p~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~lR~~~  166 (317)
T 3ajr_A          119 ETPK------------------------------NKVPS-ITITRPRTMFGVTKIAAELLGQYYYEKF-GLDVRSLRYPG  166 (317)
T ss_dssp             TSCS------------------------------SSBCS-SSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECE
T ss_pred             CCCC------------------------------CCccc-cccCCCCchHHHHHHHHHHHHHHHHHhc-CCeEEEEecCc
Confidence            1000                              00000 0011245789999999999999888765 88999887655


Q ss_pred             eec
Q 039097          246 VKT  248 (290)
Q Consensus       246 v~T  248 (290)
                      +..
T Consensus       167 ~~g  169 (317)
T 3ajr_A          167 IIS  169 (317)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            543

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.78  E-value=1.1e-18  Score=154.51  Aligned_cols=174  Identities=16%  Similarity=0.109  Sum_probs=126.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++|||||+|+||++++++|+++| ++|++++|+.....  ...+.     .+. +.+|+++.+.++++++...  ++++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d   70 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-----DLN-IADYMDKEDFLIQIMAGEE--FGDVE   70 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH-----TSC-CSEEEEHHHHHHHHHTTCC--CSSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC-----cce-eccccccHHHHHHHHhccc--cCCCc
Confidence            48999999999999999999999 89999999865431  11121     122 6789999888877765210  23699


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||....                      +.+++++.+++|+.++.++++++.+    .+. ++|++||...+...
T Consensus        71 ~vi~~a~~~~~----------------------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~  123 (310)
T 1eq2_A           71 AIFHEGACSST----------------------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGR  123 (310)
T ss_dssp             EEEECCSCCCT----------------------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTC
T ss_pred             EEEECcccccC----------------------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCC
Confidence            99999997532                      2245678899999999999999854    244 99999998543221


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..         .+                      ..+.. .+.+...|+.+|.+.+.+++.++.+. +++++.+.||.+
T Consensus       124 ~~---------~~----------------------~~E~~-~~~p~~~Y~~sK~~~e~~~~~~~~~~-g~~~~~lrp~~v  170 (310)
T 1eq2_A          124 TS---------DF----------------------IESRE-YEKPLNVYGYSKFLFDEYVRQILPEA-NSQIVGFRYFNV  170 (310)
T ss_dssp             CS---------CB----------------------CSSGG-GCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECEE
T ss_pred             CC---------CC----------------------CCCCC-CCCCCChhHHHHHHHHHHHHHHHHHc-CCCEEEEeCCcE
Confidence            00         00                      00000 01234689999999999999998775 899999999999


Q ss_pred             ecCcc
Q 039097          247 KTEMT  251 (290)
Q Consensus       247 ~T~~~  251 (290)
                      .++..
T Consensus       171 ~G~~~  175 (310)
T 1eq2_A          171 YGPRE  175 (310)
T ss_dssp             ESSSC
T ss_pred             ECcCC
Confidence            88753

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.78  E-value=2.5e-19  Score=157.41  Aligned_cols=196  Identities=16%  Similarity=0.061  Sum_probs=138.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |+++++|||| +|+||++++++|+++|++|++++|+..+.           ...+.++.+|++|.+++.++++      +
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------ccCCceEEccCCChHHHHHhhc------C
Confidence            3467899999 59999999999999999999999987652           1358889999999998887765      3


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+|||+||..                         ..+.+..+++|+.++.++++++.    +.+.+++|++||...+
T Consensus        63 ~~d~vih~a~~~-------------------------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vy  113 (286)
T 3gpi_A           63 RPEILVYCVAAS-------------------------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVY  113 (286)
T ss_dssp             CCSEEEECHHHH-------------------------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGC
T ss_pred             CCCEEEEeCCCC-------------------------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEE
Confidence            699999999962                         24456788999999999999984    4456799999997543


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .....                               .+..+. ..+.+...|+.+|.+.+.+ +..      ++++.+.|
T Consensus       114 g~~~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~-~~~------~~~~ilR~  154 (286)
T 3gpi_A          114 GQEVE-------------------------------EWLDED-TPPIAKDFSGKRMLEAEAL-LAA------YSSTILRF  154 (286)
T ss_dssp             CCCCS-------------------------------SEECTT-SCCCCCSHHHHHHHHHHHH-GGG------SSEEEEEE
T ss_pred             cCCCC-------------------------------CCCCCC-CCCCCCChhhHHHHHHHHH-Hhc------CCeEEEec
Confidence            32100                               000000 0012357899999999998 543      78889999


Q ss_pred             ceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          244 GYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       244 G~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      |.+.++....+                 ....++|+|+.++.++..+.....|..|...
T Consensus       155 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~  213 (286)
T 3gpi_A          155 SGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVT  213 (286)
T ss_dssp             CEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             ccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEe
Confidence            98887753311                 2346799999999998876322334444433

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.78  E-value=2.4e-18  Score=150.85  Aligned_cols=179  Identities=12%  Similarity=0.047  Sum_probs=136.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      |++|||||+|+||++++++|+++  |++|++++|++.+.+....       ..+.++.+|++|.+++.++++       +
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------~~~~~~~~D~~d~~~l~~~~~-------~   66 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------QGVEVRHGDYNQPESLQKAFA-------G   66 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------cCCeEEEeccCCHHHHHHHHh-------c
Confidence            46999999999999999999999  9999999998776543221       247889999999998887766       5


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+||...                       . +      ++|+.++.++++++    ++.+.++||++||..+..
T Consensus        67 ~d~vi~~a~~~~-----------------------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~  112 (287)
T 2jl1_A           67 VSKLLFISGPHY-----------------------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE  112 (287)
T ss_dssp             CSEEEECCCCCS-----------------------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG
T ss_pred             CCEEEEcCCCCc-----------------------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC
Confidence            899999999520                       1 1      57888999998888    444567999999986521


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                                                                    ....|+.+|.+.+.+++.     .+++++.+.||
T Consensus       113 ----------------------------------------------~~~~y~~~K~~~E~~~~~-----~~~~~~ilrp~  141 (287)
T 2jl1_A          113 ----------------------------------------------SIIPLAHVHLATEYAIRT-----TNIPYTFLRNA  141 (287)
T ss_dssp             ----------------------------------------------CCSTHHHHHHHHHHHHHH-----TTCCEEEEEEC
T ss_pred             ----------------------------------------------CCCchHHHHHHHHHHHHH-----cCCCeEEEECC
Confidence                                                          014799999999999863     48889999999


Q ss_pred             eeecCc-ccC------------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          245 YVKTEM-TYN------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       245 ~v~T~~-~~~------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ++.++. ...                  .....++|+|+.++.++..+.  ..|+.|...+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~  200 (287)
T 2jl1_A          142 LYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENKTYNLVS  200 (287)
T ss_dssp             CBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTEEEEECC
T ss_pred             EeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCcEEEecC
Confidence            887654 111                  124588999999998887554  3565555443

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.77  E-value=9.4e-19  Score=154.38  Aligned_cols=192  Identities=16%  Similarity=0.055  Sum_probs=138.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|+||++++++|+ +|++|++++|+..                  ++.+|++|.+++.++++..     ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------~~~~D~~d~~~~~~~~~~~-----~~d~   57 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------EFCGDFSNPKGVAETVRKL-----RPDV   57 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------SSCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------cccccCCCHHHHHHHHHhc-----CCCE
Confidence            69999999999999999999 8999999999862                  2578999999999888764     6999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+||.....                    .+.+++++.+++|+.++.++++++.+    .+ .++|++||...+....
T Consensus        58 vih~a~~~~~~--------------------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~  112 (299)
T 1n2s_A           58 IVNAAAHTAVD--------------------KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTG  112 (299)
T ss_dssp             EEECCCCCCHH--------------------HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCT
T ss_pred             EEECcccCCHh--------------------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCC
Confidence            99999975311                    02356778899999999999999943    33 4899999986543210


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+..+.. .+.+...|+.+|.+.+.+++.++.     +++.+.||.+.
T Consensus       113 ~-------------------------------~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~ilRp~~v~  155 (299)
T 1n2s_A          113 D-------------------------------IPWQETD-ATSPLNVYGKTKLAGEKALQDNCP-----KHLIFRTSWVY  155 (299)
T ss_dssp             T-------------------------------CCBCTTS-CCCCSSHHHHHHHHHHHHHHHHCS-----SEEEEEECSEE
T ss_pred             C-------------------------------CCCCCCC-CCCCccHHHHHHHHHHHHHHHhCC-----CeEEEeeeeec
Confidence            0                               0000000 012346899999999999988764     78889999998


Q ss_pred             cCcccCC----------------------CCCChhhhccchhhhhhccCCCC-ceeEeecC
Q 039097          248 TEMTYNA----------------------GRLTVEEGAESPVWLALLHKGGP-SGLFFSRK  285 (290)
Q Consensus       248 T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~~~~-~g~~~~~~  285 (290)
                      ++.....                      ....++|+|+.++.++..+.... .|..|...
T Consensus       156 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~  216 (299)
T 1n2s_A          156 AGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLV  216 (299)
T ss_dssp             CSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECC
T ss_pred             CCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceEEEe
Confidence            8753321                      12347899999988887653122 34444443

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.77  E-value=2e-19  Score=159.95  Aligned_cols=197  Identities=14%  Similarity=0.028  Sum_probs=134.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++++|||||+|+||++++++|+++|++|++++|+........+.+... ....+.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            467899999999999999999999999999999999875210000111110 1123455566665               


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        ++|+|||+||......                    ..+.....++ |+.++.++++++..    .+.++||++||..
T Consensus        69 --~~d~vi~~a~~~~~~~--------------------~~~~~~~~~~-n~~~~~~ll~a~~~----~~v~~~v~~SS~~  121 (321)
T 3vps_A           69 --DVRLVYHLASHKSVPR--------------------SFKQPLDYLD-NVDSGRHLLALCTS----VGVPKVVVGSTCE  121 (321)
T ss_dssp             --TEEEEEECCCCCCHHH--------------------HTTSTTTTHH-HHHHHHHHHHHHHH----HTCCEEEEEEEGG
T ss_pred             --cCCEEEECCccCChHH--------------------HHhCHHHHHH-HHHHHHHHHHHHHH----cCCCeEEEecCHH
Confidence              6999999999764211                    1223345667 99999999999843    3457999999976


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCe-EEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF-CINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i-~vn~  240 (290)
                      .+.....                               .+..+.. ...+...|+.+|.+.+.+++.++.+. ++ +++.
T Consensus       122 v~~~~~~-------------------------------~~~~E~~-~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~i  168 (321)
T 3vps_A          122 VYGQADT-------------------------------LPTPEDS-PLSPRSPYAASKVGLEMVAGAHQRAS-VAPEVGI  168 (321)
T ss_dssp             GGCSCSS-------------------------------SSBCTTS-CCCCCSHHHHHHHHHHHHHHHHHHSS-SSCEEEE
T ss_pred             HhCCCCC-------------------------------CCCCCCC-CCCCCChhHHHHHHHHHHHHHHHHHc-CCCceEE
Confidence            5432100                               0000000 01235789999999999999998876 77 9999


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.||.+.++.....                          ....++|+|+.++.++..+.
T Consensus       169 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~  228 (321)
T 3vps_A          169 VRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL  228 (321)
T ss_dssp             EEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC
T ss_pred             EEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC
Confidence            99999988754320                          12478999999999887665

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.76  E-value=1.7e-18  Score=153.12  Aligned_cols=207  Identities=13%  Similarity=0.050  Sum_probs=142.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .|+++++|||||+|+||++++++|+++|+      +....            ...+..+.+|++|.+++.++++..    
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~------------~~~~~~~~~D~~d~~~~~~~~~~~----   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED------------WVFVSSKDADLTDTAQTRALFEKV----   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE------------EEECCTTTCCTTSHHHHHHHHHHS----
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc------------ccccCceecccCCHHHHHHHHhhc----
Confidence            46789999999999999999999999998      11100            012344579999999999888852    


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+|||+|+......                   .+.++..+.+++|+.++.++++++    ++.+.+++|++||...
T Consensus        61 -~~d~Vih~A~~~~~~~-------------------~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~v  116 (319)
T 4b8w_A           61 -QPTHVIHLAAMVGGLF-------------------RNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCI  116 (319)
T ss_dssp             -CCSEEEECCCCCCCHH-------------------HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGG
T ss_pred             -CCCEEEECceeccccc-------------------ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhh
Confidence             6999999999752100                   134556788999999999999998    4445579999999854


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      +......    +.  +.                     .........+....|+.+|.+.+.+++.++.+. ++++..+.
T Consensus       117 yg~~~~~----~~--~E---------------------~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilR  168 (319)
T 4b8w_A          117 FPDKTTY----PI--DE---------------------TMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQY-GCTFTAVI  168 (319)
T ss_dssp             SCSSCCS----SB--CG---------------------GGGGBSCCCSSSHHHHHHHHHHHHHHHHHHHHH-CCEEEEEE
T ss_pred             cCCCCCC----Cc--cc---------------------cccccCCCCCCcchHHHHHHHHHHHHHHHHHhh-CCCEEEEe
Confidence            3221000    00  00                     000000001223479999999999999998876 89999999


Q ss_pred             cceeecCcccC----------------------C------------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          243 PGYVKTEMTYN----------------------A------------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       243 PG~v~T~~~~~----------------------~------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      |+.+.+|....                      .            .....+|+|+.++.++..+.. ..+..|..
T Consensus       169 p~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni  243 (319)
T 4b8w_A          169 PTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFIWVLREYNE-VEPIILSV  243 (319)
T ss_dssp             ECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHHHHHHHHCCC-SSCEEECC
T ss_pred             eccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHHHHHHhcccc-CCceEEEe
Confidence            99988775321                      0            124678999999888876543 33445544

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.74  E-value=1.1e-17  Score=146.42  Aligned_cols=176  Identities=13%  Similarity=0.079  Sum_probs=129.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++|||||+|+||++++++|+++  |++|++++|++.+.+....       ..+.++.+|++|.+++.++++       ++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~-------~~   66 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------QGITVRQADYGDEAALTSALQ-------GV   66 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------CCCeEEEcCCCCHHHHHHHHh-------CC
Confidence            4899999999999999999998  9999999999776543221       247889999999998887765       58


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||..                        .        ..|+.++.++++++    ++.+.++||++||..+.. 
T Consensus        67 d~vi~~a~~~------------------------~--------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~-  109 (286)
T 2zcu_A           67 EKLLLISSSE------------------------V--------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHADT-  109 (286)
T ss_dssp             SEEEECC----------------------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTTT-
T ss_pred             CEEEEeCCCC------------------------c--------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC-
Confidence            9999999942                        0        13677777777777    444567999999986531 


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                                                                   ....|+.+|.+.+.+++.     .+++++.+.||+
T Consensus       110 ---------------------------------------------~~~~y~~sK~~~e~~~~~-----~~~~~~ilrp~~  139 (286)
T 2zcu_A          110 ---------------------------------------------SPLGLADEHIETEKMLAD-----SGIVYTLLRNGW  139 (286)
T ss_dssp             ---------------------------------------------CCSTTHHHHHHHHHHHHH-----HCSEEEEEEECC
T ss_pred             ---------------------------------------------CcchhHHHHHHHHHHHHH-----cCCCeEEEeChH
Confidence                                                         014799999999999864     489999999998


Q ss_pred             eecCcccC------------------CCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          246 VKTEMTYN------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       246 v~T~~~~~------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      +.+++...                  .....++|+|+.++.++..+.  ..|+.|...+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i~~  196 (286)
T 2zcu_A          140 YSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYELAG  196 (286)
T ss_dssp             BHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEEECC
T ss_pred             HhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEEEeC
Confidence            87653211                  134688999999999887654  3555555443

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.74  E-value=8.9e-18  Score=159.41  Aligned_cols=206  Identities=15%  Similarity=0.059  Sum_probs=142.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH---HHHHHHHHh--------cCCCcEEEEEeeCCCHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG---LEAVEKLKH--------SGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~---~~~~~~l~~--------~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      .++||||||+|+||++++++|.++|++|++++|+..+.   ....+.+..        ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            47999999999999999999999999999999997732   222222221        12357999999999987776  


Q ss_pred             HHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeE
Q 039097           75 ADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARI  154 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~i  154 (290)
                            ...++|+|||+|+...                       ....+.+.+++|+.++.++++.+.+     ..+++
T Consensus       228 ------~~~~~D~Vih~Aa~~~-----------------------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~  273 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD-----------------------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARL  273 (508)
T ss_dssp             ------CSSCCSEEEECCCC-------------------------------CCHHHHHHHHHHHHHHHHT-----TTCEE
T ss_pred             ------CccCCCEEEECCceec-----------------------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcE
Confidence                  3468999999999763                       2245677899999999999999854     45799


Q ss_pred             EEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC
Q 039097          155 VNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP  234 (290)
Q Consensus       155 V~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~  234 (290)
                      |++||... ..+....... ..                     +.+....  ..+.+...|+.+|.+.+.+++.++.  .
T Consensus       274 v~iSS~~v-G~~~~~~~~~-~~---------------------~~E~~~~--~~~~~~~~Y~~sK~~~E~~~~~~~~--~  326 (508)
T 4f6l_B          274 IYVSTISV-GTYFDIDTED-VT---------------------FSEADVY--KGQLLTSPYTRSKFYSELKVLEAVN--N  326 (508)
T ss_dssp             EEEEESCT-TSEECTTCSC-CE---------------------ECTTCSC--SSBCCCSHHHHHHHHHHHHHHHHHH--T
T ss_pred             EEeCChhh-ccCCccCCcC-cc---------------------ccccccc--ccccCCCcHHHHHHHHHHHHHHHHH--c
Confidence            99999876 2110000000 00                     0000000  0001357899999999999998764  4


Q ss_pred             CeEEEEeecceeecCcccCC--------------------------------CCCChhhhccchhhhhhccC
Q 039097          235 NFCINCVCPGYVKTEMTYNA--------------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~--------------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +++++.+.||.+.++....+                                .....+++|+.+++++..+.
T Consensus       327 gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~  398 (508)
T 4f6l_B          327 GLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT  398 (508)
T ss_dssp             TCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC
T ss_pred             CCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC
Confidence            89999999999988754321                                02356889999999887665

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.73  E-value=4e-17  Score=144.18  Aligned_cols=190  Identities=15%  Similarity=0.069  Sum_probs=132.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +|+++||||+|+||++++++|+++| ++|++++|++.+...  +.+..   ..+.++.+|++|.+++.++++       +
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~   72 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---QGAEVVQGDQDDQVIMELALN-------G   72 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---TTCEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---CCCEEEEecCCCHHHHHHHHh-------c
Confidence            6899999999999999999999999 999999999776432  22222   247889999999999888776       5


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+|||+++...                          .+  ..+.|+.+...+++++    ++.+.++||++|+. +..
T Consensus        73 ~d~vi~~a~~~~--------------------------~~--~~~~~~~~~~~~~~aa----~~~gv~~iv~~S~~-~~~  119 (299)
T 2wm3_A           73 AYATFIVTNYWE--------------------------SC--SQEQEVKQGKLLADLA----RRLGLHYVVYSGLE-NIK  119 (299)
T ss_dssp             CSEEEECCCHHH--------------------------HT--CHHHHHHHHHHHHHHH----HHHTCSEEEECCCC-CHH
T ss_pred             CCEEEEeCCCCc--------------------------cc--cchHHHHHHHHHHHHH----HHcCCCEEEEEcCc-ccc
Confidence            899999998531                          00  1234455555555554    55556899996654 322


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      ...                                .      +  .....|+.+|.+++.+++.     .+++++.+.||
T Consensus       120 ~~~--------------------------------~------~--~~~~~y~~sK~~~e~~~~~-----~gi~~~ilrp~  154 (299)
T 2wm3_A          120 KLT--------------------------------A------G--RLAAAHFDGKGEVEEYFRD-----IGVPMTSVRLP  154 (299)
T ss_dssp             HHT--------------------------------T------T--SCCCHHHHHHHHHHHHHHH-----HTCCEEEEECC
T ss_pred             ccC--------------------------------C------C--cccCchhhHHHHHHHHHHH-----CCCCEEEEeec
Confidence            110                                0      0  1125799999999999875     27899999999


Q ss_pred             eeecCcccCC----------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          245 YVKTEMTYNA----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       245 ~v~T~~~~~~----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ++.+++...+                      ...+++|+|+.++.++..+.. ..|+.+...+
T Consensus       155 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~g~~~~~~g  217 (299)
T 2wm3_A          155 CYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-YVGQNIGLST  217 (299)
T ss_dssp             EEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-HTTCEEECCS
T ss_pred             HHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-hCCeEEEeee
Confidence            9888753210                      123778999998888775421 2345555443

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.70  E-value=4.2e-16  Score=140.55  Aligned_cols=182  Identities=14%  Similarity=0.061  Sum_probs=129.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |+++++|||||+|+||++++++|+++|++|++++|++....+..+.+.......+.++.+|++|.+++.+++++.     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            556799999999999999999999999999999998733222222222211235899999999999999988763     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLG  162 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g  162 (290)
                      ++|+|||+||.                                   .|+.++.++++++.    +.+ ..++|+ |+ .|
T Consensus        83 ~~d~Vi~~a~~-----------------------------------~n~~~~~~l~~aa~----~~g~v~~~v~-S~-~g  121 (346)
T 3i6i_A           83 EIDIVVSTVGG-----------------------------------ESILDQIALVKAMK----AVGTIKRFLP-SE-FG  121 (346)
T ss_dssp             TCCEEEECCCG-----------------------------------GGGGGHHHHHHHHH----HHCCCSEEEC-SC-CS
T ss_pred             CCCEEEECCch-----------------------------------hhHHHHHHHHHHHH----HcCCceEEee-cc-cC
Confidence            79999999994                                   17777888888874    334 567775 33 22


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ....                                     + .....+...|+.+|.+.+.+.+.     .++.+..+.
T Consensus       122 ~~~~-------------------------------------e-~~~~~p~~~y~~sK~~~e~~l~~-----~g~~~tivr  158 (346)
T 3i6i_A          122 HDVN-------------------------------------R-ADPVEPGLNMYREKRRVRQLVEE-----SGIPFTYIC  158 (346)
T ss_dssp             SCTT-------------------------------------T-CCCCTTHHHHHHHHHHHHHHHHH-----TTCCBEEEE
T ss_pred             CCCC-------------------------------------c-cCcCCCcchHHHHHHHHHHHHHH-----cCCCEEEEE
Confidence            2100                                     0 00013457899999999988875     478888999


Q ss_pred             cceeecCcccCC-----------------------CCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||++........                       ....++|+|+.+++++..++
T Consensus       159 pg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~  213 (346)
T 3i6i_A          159 CNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR  213 (346)
T ss_dssp             CCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG
T ss_pred             ecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc
Confidence            998876542211                       13478999999999988765

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.68  E-value=3e-16  Score=142.73  Aligned_cols=158  Identities=16%  Similarity=0.033  Sum_probs=126.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++|||||+|+||++++++|+++|+ +|+..+|+                          +|.+++.++++       ++|
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------~d~~~l~~~~~-------~~d   48 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------TKEEELESALL-------KAD   48 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------CCHHHHHHHHH-------HCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------CCHHHHHHHhc-------cCC
Confidence            699999999999999999999998 77777665                          67778888777       489


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC-eEEEEcCCCCccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA-RIVNVSSSLGKLM  165 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~-~iV~isS~~g~~~  165 (290)
                      +|||+||...                        .+...+.+++|+.++.++++++.    +.+.+ ++|++||..... 
T Consensus        49 ~Vih~a~~~~------------------------~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~-   99 (369)
T 3st7_A           49 FIVHLAGVNR------------------------PEHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ-   99 (369)
T ss_dssp             EEEECCCSBC------------------------TTCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS-
T ss_pred             EEEECCcCCC------------------------CCCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC-
Confidence            9999999763                        23345678999999999999984    34444 899999986532 


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                                                                    ...|+.+|.+.+.+++.++.+. ++++..+.|+.
T Consensus       100 ----------------------------------------------~~~Y~~sK~~~E~~~~~~~~~~-g~~~~i~R~~~  132 (369)
T 3st7_A          100 ----------------------------------------------DNPYGESKLQGEQLLREYAEEY-GNTVYIYRWPN  132 (369)
T ss_dssp             ----------------------------------------------CSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECE
T ss_pred             ----------------------------------------------CCCchHHHHHHHHHHHHHHHHh-CCCEEEEECCc
Confidence                                                          2679999999999999998876 78899999999


Q ss_pred             eecCcccCC---------------------------CCCChhhhccchhhhhhccC
Q 039097          246 VKTEMTYNA---------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       246 v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.++.....                           ....++|+|+.++.++..+.
T Consensus       133 v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          133 LFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             EECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             eeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            888743210                           12357899999988887665

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.68  E-value=7.4e-16  Score=139.68  Aligned_cols=175  Identities=17%  Similarity=0.110  Sum_probs=125.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEee-CCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD-VADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~   82 (290)
                      +++++++||||+|+||++++++|+++|++|++++|++.+..  .+.+...  ..+.++.+| ++|.+++.++++      
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~~--~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQAI--PNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHTS--TTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhhc--CCcEEEECCccCCHHHHHHHHh------
Confidence            45789999999999999999999999999999999987652  1233221  258889999 999999888775      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~  161 (290)
                       .+|+||||++..                        +       ...|..+ .++++++    ++.+ .++||++||..
T Consensus        73 -~~d~Vi~~a~~~------------------------~-------~~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           73 -GAHLAFINTTSQ------------------------A-------GDEIAIG-KDLADAA----KRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             -TCSEEEECCCST------------------------T-------SCHHHHH-HHHHHHH----HHHSCCSEEEEEECCC
T ss_pred             -cCCEEEEcCCCC------------------------C-------cHHHHHH-HHHHHHH----HHcCCccEEEEeCCcc
Confidence             589999999743                        1       0124444 5555555    4444 57999999986


Q ss_pred             C-cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          162 G-KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       162 g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      . ..+.                                           .....|+.+|++.+.+++.+     +++++.
T Consensus       116 ~~~~~~-------------------------------------------~~~~~y~~sK~~~E~~~~~~-----gi~~~i  147 (352)
T 1xgk_A          116 HSLYGP-------------------------------------------WPAVPMWAPKFTVENYVRQL-----GLPSTF  147 (352)
T ss_dssp             GGGTSS-------------------------------------------CCCCTTTHHHHHHHHHHHTS-----SSCEEE
T ss_pred             ccccCC-------------------------------------------CCCccHHHHHHHHHHHHHHc-----CCCEEE
Confidence            2 2110                                           12357999999999998753     788888


Q ss_pred             eecceeecCcccC-----------C---------------CCCCh-hhhccchhhhhhcc
Q 039097          241 VCPGYVKTEMTYN-----------A---------------GRLTV-EEGAESPVWLALLH  273 (290)
Q Consensus       241 v~PG~v~T~~~~~-----------~---------------~~~~~-e~~a~~~~~l~~~~  273 (290)
                      |.||++-+.....           .               ...++ +|+|+.++.++..+
T Consensus       148 vrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~  207 (352)
T 1xgk_A          148 VYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  207 (352)
T ss_dssp             EEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             EecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCC
Confidence            9998765443211           0               12356 78898888887654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.66  E-value=2.1e-15  Score=133.24  Aligned_cols=174  Identities=14%  Similarity=0.129  Sum_probs=120.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-------ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-------KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +++++||||+|+||++++++|+++|++|++++|++       ++.+. .+++..   ..+.++.+|++|.+++.++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~---~~v~~v~~D~~d~~~l~~~~~--   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS---LGVILLEGDINDHETLVKAIK--   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH---TTCEEEECCTTCHHHHHHHHT--
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh---CCCEEEEeCCCCHHHHHHHHh--
Confidence            46799999999999999999999999999999986       22222 223322   247889999999998888776  


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEE
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~i  157 (290)
                           ++|+|||+||..                        .           +.+..++++++    ++.+ .+++|. 
T Consensus        76 -----~~d~vi~~a~~~------------------------~-----------~~~~~~l~~aa----~~~g~v~~~v~-  110 (307)
T 2gas_A           76 -----QVDIVICAAGRL------------------------L-----------IEDQVKIIKAI----KEAGNVKKFFP-  110 (307)
T ss_dssp             -----TCSEEEECSSSS------------------------C-----------GGGHHHHHHHH----HHHCCCSEEEC-
T ss_pred             -----CCCEEEECCccc------------------------c-----------cccHHHHHHHH----HhcCCceEEee-
Confidence                 699999999963                        1           23445555555    4444 578873 


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                       |..|....                                     ......+....| .+|++++.+++.     .+++
T Consensus       111 -S~~g~~~~-------------------------------------~~~~~~p~~~~y-~sK~~~e~~~~~-----~~i~  146 (307)
T 2gas_A          111 -SEFGLDVD-------------------------------------RHDAVEPVRQVF-EEKASIRRVIEA-----EGVP  146 (307)
T ss_dssp             -SCCSSCTT-------------------------------------SCCCCTTHHHHH-HHHHHHHHHHHH-----HTCC
T ss_pred             -cccccCcc-------------------------------------cccCCCcchhHH-HHHHHHHHHHHH-----cCCC
Confidence             43332110                                     000001334689 999999988864     2688


Q ss_pred             EEEeecceeecCcccC-----------------------CCCCChhhhccchhhhhhccC
Q 039097          238 INCVCPGYVKTEMTYN-----------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~-----------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++.+.||++.+++...                       ....+++|+|+.++.++..+.
T Consensus       147 ~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (307)
T 2gas_A          147 YTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN  206 (307)
T ss_dssp             BEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG
T ss_pred             eEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc
Confidence            8889999887754211                       012478999999998887654

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=9.7e-16  Score=134.20  Aligned_cols=177  Identities=11%  Similarity=-0.054  Sum_probs=122.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.+++||||+ |+||++++++|+++|++|++++|++.+......       ..+.++.+|++|.+            +.+
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~------------~~~   63 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS------------LDG   63 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC------------CTT
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc------------cCC
Confidence            3478999998 999999999999999999999999876544322       24899999999933            458


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc--CCCCeEEEEcCCCC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL--SDSARIVNVSSSLG  162 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~--~~~~~iV~isS~~g  162 (290)
                      +|+|||+|+.....                       +..          ...+++++    ++  .+.+++|++||...
T Consensus        64 ~d~vi~~a~~~~~~-----------------------~~~----------~~~l~~a~----~~~~~~~~~~v~~Ss~~v  106 (286)
T 3ius_A           64 VTHLLISTAPDSGG-----------------------DPV----------LAALGDQI----AARAAQFRWVGYLSTTAV  106 (286)
T ss_dssp             CCEEEECCCCBTTB-----------------------CHH----------HHHHHHHH----HHTGGGCSEEEEEEEGGG
T ss_pred             CCEEEECCCccccc-----------------------cHH----------HHHHHHHH----HhhcCCceEEEEeeccee
Confidence            99999999965211                       000          12333333    43  34579999999754


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      +.....                               .+..+. ..+.+...|+.+|.+.+.+++.+    .+++++.+.
T Consensus       107 yg~~~~-------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~----~~~~~~ilR  150 (286)
T 3ius_A          107 YGDHDG-------------------------------AWVDET-TPLTPTAARGRWRVMAEQQWQAV----PNLPLHVFR  150 (286)
T ss_dssp             GCCCTT-------------------------------CEECTT-SCCCCCSHHHHHHHHHHHHHHHS----TTCCEEEEE
T ss_pred             cCCCCC-------------------------------CCcCCC-CCCCCCCHHHHHHHHHHHHHHhh----cCCCEEEEe
Confidence            322100                               000000 01123468999999999999877    689999999


Q ss_pred             cceeecCcccCC------------------CCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||.+.++.....                  .....+|+++.++.++..+.
T Consensus       151 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~  200 (286)
T 3ius_A          151 LAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD  200 (286)
T ss_dssp             ECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC
T ss_pred             ccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC
Confidence            999988753221                  12456899999999887665

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.63  E-value=7.1e-16  Score=135.35  Aligned_cols=178  Identities=14%  Similarity=0.044  Sum_probs=122.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++|||||+|+||++++++|+++ |++|++++|++.+....    .   ...+.++.+|++|.+++.++++       ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~---~~~v~~~~~D~~d~~~l~~~~~-------~~d   67 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----W---RGKVSVRQLDYFNQESMVEAFK-------GMD   67 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----G---BTTBEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----h---hCCCEEEEcCCCCHHHHHHHHh-------CCC
Confidence            5999999999999999999998 99999999998754321    1   1358999999999998888775       689


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+||...                       .       ...|+.+...+++++    ++.+.++||++||...... 
T Consensus        68 ~vi~~a~~~~-----------------------~-------~~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~-  112 (289)
T 3e48_A           68 TVVFIPSIIH-----------------------P-------SFKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHN-  112 (289)
T ss_dssp             EEEECCCCCC-----------------------S-------HHHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTT-
T ss_pred             EEEEeCCCCc-----------------------c-------chhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCC-
Confidence            9999999642                       1       112555555555555    5566689999999643211 


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                                                                    ..|..++...  .++....+ .+++++.+.||++
T Consensus       113 ----------------------------------------------~~~~~~~~~~--~~e~~~~~-~g~~~~ilrp~~~  143 (289)
T 3e48_A          113 ----------------------------------------------NPFHMSPYFG--YASRLLST-SGIDYTYVRMAMY  143 (289)
T ss_dssp             ----------------------------------------------CCSTTHHHHH--HHHHHHHH-HCCEEEEEEECEE
T ss_pred             ----------------------------------------------CCCccchhHH--HHHHHHHH-cCCCEEEEecccc
Confidence                                                          1122222211  11111111 3899999999999


Q ss_pred             ecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          247 KTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       247 ~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+++....                  ...+++|+|+.++.++..+...  |+.|...
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~~~~  198 (289)
T 3e48_A          144 MDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRYLLS  198 (289)
T ss_dssp             STTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEEEEC
T ss_pred             ccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceEEeC
Confidence            88753210                  1458899999999998876632  5555444

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.63  E-value=3.1e-15  Score=135.28  Aligned_cols=173  Identities=13%  Similarity=0.055  Sum_probs=118.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC-----CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNG-----IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g-----~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++++|||||+|+||++++++|+++|     ++|++++|++....     .   ....+.++.+|++|.+++.++++.+  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~---~~~~~~~~~~Dl~d~~~~~~~~~~~--   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H---EDNPINYVQCDISDPDDSQAKLSPL--   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C---CSSCCEEEECCTTSHHHHHHHHTTC--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c---ccCceEEEEeecCCHHHHHHHHhcC--
Confidence            5789999999999999999999999     99999999876532     1   1235888999999999888776632  


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEE-----
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIV-----  155 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV-----  155 (290)
                        +++|+|||+||...                         ++..+.+++|+.++.++++++.+...  +..++|     
T Consensus        71 --~~~d~vih~a~~~~-------------------------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~  121 (364)
T 2v6g_A           71 --TDVTHVFYVTWANR-------------------------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGR  121 (364)
T ss_dssp             --TTCCEEEECCCCCC-------------------------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCT
T ss_pred             --CCCCEEEECCCCCc-------------------------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCc
Confidence              24999999999641                         23567899999999999999965421  345776     


Q ss_pred             --EEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC
Q 039097          156 --NVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY  233 (290)
Q Consensus       156 --~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~  233 (290)
                        ++||...+.....                             ...+..+.....+....|    .+.+.+++.++.+.
T Consensus       122 ~i~~Ss~~vyg~~~~-----------------------------~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~~~  168 (364)
T 2v6g_A          122 KHYMGPFESYGKIES-----------------------------HDPPYTEDLPRLKYMNFY----YDLEDIMLEEVEKK  168 (364)
T ss_dssp             HHHHCCGGGTTTSCC-----------------------------CCSSBCTTSCCCSSCCHH----HHHHHHHHHHHTTS
T ss_pred             eEEEechhhcccccc-----------------------------CCCCCCccccCCccchhh----HHHHHHHHHHhhcC
Confidence              6777643221100                             000000000000112356    34677777766555


Q ss_pred             CCeEEEEeecceeecCc
Q 039097          234 PNFCINCVCPGYVKTEM  250 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~  250 (290)
                      +++++..+.|+.+..+.
T Consensus       169 ~~~~~~ilRp~~v~G~~  185 (364)
T 2v6g_A          169 EGLTWSVHRPGNIFGFS  185 (364)
T ss_dssp             TTCEEEEEEESSEECCC
T ss_pred             CCceEEEECCCceeCCC
Confidence            45999999999988764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.62  E-value=8.3e-15  Score=129.80  Aligned_cols=183  Identities=11%  Similarity=0.080  Sum_probs=122.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH-HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG-LEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .++++||||+|+||++++++|+++|++|++++|+.... .+..+.+.......+.++.+|++|.+++.++++       +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            46799999999999999999999999999999985431 111112211112348889999999999888776       5


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGK  163 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~  163 (290)
                      +|+|||++|....                               ..|+.+..++++++    ++.+ .++||+  |..+.
T Consensus        77 ~d~vi~~a~~~~~-------------------------------~~~~~~~~~l~~aa----~~~g~v~~~v~--S~~g~  119 (313)
T 1qyd_A           77 VDVVISALAGGVL-------------------------------SHHILEQLKLVEAI----KEAGNIKRFLP--SEFGM  119 (313)
T ss_dssp             CSEEEECCCCSSS-------------------------------STTTTTHHHHHHHH----HHSCCCSEEEC--SCCSS
T ss_pred             CCEEEECCccccc-------------------------------hhhHHHHHHHHHHH----HhcCCCceEEe--cCCcC
Confidence            8999999996521                               12677777777777    4444 578884  33332


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ....                                 .   .....+....| .+|.+.+.+.+.     .++.++.+.|
T Consensus       120 ~~~~---------------------------------~---~~~~~p~~~~y-~sK~~~e~~~~~-----~g~~~~ilrp  157 (313)
T 1qyd_A          120 DPDI---------------------------------M---EHALQPGSITF-IDKRKVRRAIEA-----ASIPYTYVSS  157 (313)
T ss_dssp             CTTS---------------------------------C---CCCCSSTTHHH-HHHHHHHHHHHH-----TTCCBCEEEC
T ss_pred             Cccc---------------------------------c---ccCCCCCcchH-HHHHHHHHHHHh-----cCCCeEEEEe
Confidence            1100                                 0   00001234678 999999988863     3677777888


Q ss_pred             ceeecCccc-----------C-------------CCCCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTY-----------N-------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~-----------~-------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |++.+++..           .             ....+++|+|+.++.++..+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~  212 (313)
T 1qyd_A          158 NMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ  212 (313)
T ss_dssp             CEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG
T ss_pred             ceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc
Confidence            877543210           0             013478999999998887654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.61  E-value=6.8e-15  Score=130.04  Aligned_cols=178  Identities=13%  Similarity=0.093  Sum_probs=118.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH--HHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG--LEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++++||||+|+||++++++|+++|++|++++|+....  .+..+.+.......+.++.+|++|.+++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            46799999999999999999999999999999986432  222222211112348889999999999888877       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLG  162 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g  162 (290)
                      ++|+|||+|+..                        .           +.+...+++++    ++.+ .+++|+ | ..|
T Consensus        77 ~~d~vi~~a~~~------------------------~-----------~~~~~~l~~aa----~~~g~v~~~v~-S-~~g  115 (308)
T 1qyc_A           77 NVDVVISTVGSL------------------------Q-----------IESQVNIIKAI----KEVGTVKRFFP-S-EFG  115 (308)
T ss_dssp             TCSEEEECCCGG------------------------G-----------SGGGHHHHHHH----HHHCCCSEEEC-S-CCS
T ss_pred             CCCEEEECCcch------------------------h-----------hhhHHHHHHHH----HhcCCCceEee-c-ccc
Confidence            589999999953                        0           23344555555    4444 578873 3 333


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEee
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVC  242 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~  242 (290)
                      ....                                     +.....+....| .+|.+++.+++..     +++++.+.
T Consensus       116 ~~~~-------------------------------------~~~~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~~~r  152 (308)
T 1qyc_A          116 NDVD-------------------------------------NVHAVEPAKSVF-EVKAKVRRAIEAE-----GIPYTYVS  152 (308)
T ss_dssp             SCTT-------------------------------------SCCCCTTHHHHH-HHHHHHHHHHHHH-----TCCBEEEE
T ss_pred             cCcc-------------------------------------ccccCCcchhHH-HHHHHHHHHHHhc-----CCCeEEEE
Confidence            2110                                     000001234678 9999999888642     56777788


Q ss_pred             cceeecCcccC-----------------------CCCCChhhhccchhhhhhccC
Q 039097          243 PGYVKTEMTYN-----------------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       243 PG~v~T~~~~~-----------------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ||++.+++...                       ....+++|+++.++.++..+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  207 (308)
T 1qyc_A          153 SNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR  207 (308)
T ss_dssp             CCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG
T ss_pred             eceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc
Confidence            88775542211                       012467899999888877654

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.61  E-value=5.1e-15  Score=140.73  Aligned_cols=198  Identities=13%  Similarity=0.020  Sum_probs=135.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +++||||||+|+||++++++|+++|++|++++|+..+.+               .+.+|+.+..         .+.+.++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~---------------~v~~d~~~~~---------~~~l~~~  202 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG---------------KRFWDPLNPA---------SDLLDGA  202 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT---------------CEECCTTSCC---------TTTTTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc---------------ceeecccchh---------HHhcCCC
Confidence            578999999999999999999999999999999976521               1667876431         2234589


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+||......                   .+.+....++++|+.++.++++++.   ++.+.++||++||...+..
T Consensus       203 D~Vih~A~~~~~~~-------------------~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~  260 (516)
T 3oh8_A          203 DVLVHLAGEPIFGR-------------------FNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGH  260 (516)
T ss_dssp             SEEEECCCC------------------------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCS
T ss_pred             CEEEECCCCccccc-------------------cchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecC
Confidence            99999999753221                   1456778899999999999999843   3345579999999764431


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      .....   ..                           .  ...+.+...|+.+|...+.+.+...  ..+++++.+.||.
T Consensus       261 ~~~~~---~~---------------------------~--E~~~~~~~~y~~~~~~~E~~~~~~~--~~gi~~~ilRp~~  306 (516)
T 3oh8_A          261 DRGDE---IL---------------------------T--EESESGDDFLAEVCRDWEHATAPAS--DAGKRVAFIRTGV  306 (516)
T ss_dssp             EEEEE---EE---------------------------C--TTSCCCSSHHHHHHHHHHHTTHHHH--HTTCEEEEEEECE
T ss_pred             CCCCC---cc---------------------------C--CCCCCCcChHHHHHHHHHHHHHHHH--hCCCCEEEEEeeE
Confidence            10000   00                           0  0011234678888988887654332  2589999999999


Q ss_pred             eecCcccC----------------------CCCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          246 VKTEMTYN----------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       246 v~T~~~~~----------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      +.++....                      ......+|+++.++.++..+.  ..|.|...+
T Consensus       307 v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~--~~g~~ni~~  366 (516)
T 3oh8_A          307 ALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQ--ISGPINAVA  366 (516)
T ss_dssp             EEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTT--CCEEEEESC
T ss_pred             EECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcc--cCCcEEEEC
Confidence            99874210                      023467999999998887655  456554433

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.60  E-value=5.6e-15  Score=131.47  Aligned_cols=175  Identities=13%  Similarity=0.118  Sum_probs=118.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .++++||||+|+||++++++|+++|++|++++|++....+..+++..   ..+.++.+|++|.+++.++++       .+
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS---LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc---CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            46899999999999999999999999999999997533333333332   247889999999999888876       58


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcCCCCcc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSSSLGKL  164 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS~~g~~  164 (290)
                      |+|||+|+..                        .           +.+..++++++    ++.+ .++||+  |..|..
T Consensus        81 d~vi~~a~~~------------------------~-----------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~  119 (318)
T 2r6j_A           81 DVVISALAFP------------------------Q-----------ILDQFKILEAI----KVAGNIKRFLP--SDFGVE  119 (318)
T ss_dssp             SEEEECCCGG------------------------G-----------STTHHHHHHHH----HHHCCCCEEEC--SCCSSC
T ss_pred             CEEEECCchh------------------------h-----------hHHHHHHHHHH----HhcCCCCEEEe--eccccC
Confidence            9999999953                        0           33445555555    4444 568874  333321


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      ...                                     .....+....| .+|.+++.+++.     .++.+..+.||
T Consensus       120 ~~~-------------------------------------~~~~~p~~~~y-~sK~~~e~~~~~-----~~~~~~~lr~~  156 (318)
T 2r6j_A          120 EDR-------------------------------------INALPPFEALI-ERKRMIRRAIEE-----ANIPYTYVSAN  156 (318)
T ss_dssp             TTT-------------------------------------CCCCHHHHHHH-HHHHHHHHHHHH-----TTCCBEEEECC
T ss_pred             ccc-------------------------------------ccCCCCcchhH-HHHHHHHHHHHh-----cCCCeEEEEcc
Confidence            100                                     00000123578 999999988864     36677777887


Q ss_pred             eeecCcc--------cC------------CCCCChhhhccchhhhhhccC
Q 039097          245 YVKTEMT--------YN------------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       245 ~v~T~~~--------~~------------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      ++...+.        ..            ....+++|+++.++.++..+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~  206 (318)
T 2r6j_A          157 CFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR  206 (318)
T ss_dssp             EEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG
T ss_pred             eehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc
Confidence            6644321        00            123478999999998887654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.59  E-value=8.1e-15  Score=130.49  Aligned_cols=183  Identities=14%  Similarity=0.068  Sum_probs=120.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-c----cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-K----GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++++||||+|+||++++++|+++|++|++++|++ .    ...+..+.+..   ..+.++.+|++|.+++.++++    
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~---~~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS---MGVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH---TTCEEEECCTTCHHHHHHHHT----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc---CCcEEEEecCCCHHHHHHHHc----
Confidence            46799999999999999999999999999999986 2    12222222322   248899999999999888876    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                         .+|+|||+|+..                        .           +.+..++++++    ++.+ .++||  .|
T Consensus        77 ---~~d~vi~~a~~~------------------------~-----------~~~~~~l~~aa----~~~g~v~~~v--~S  112 (321)
T 3c1o_A           77 ---QVDIVISALPFP------------------------M-----------ISSQIHIINAI----KAAGNIKRFL--PS  112 (321)
T ss_dssp             ---TCSEEEECCCGG------------------------G-----------SGGGHHHHHHH----HHHCCCCEEE--CS
T ss_pred             ---CCCEEEECCCcc------------------------c-----------hhhHHHHHHHH----HHhCCccEEe--cc
Confidence               589999999953                        1           33445555555    4444 57887  34


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ..|.....         ..                            ...+....| .+|++++.+++..     +++++
T Consensus       113 ~~g~~~~~---------~~----------------------------~~~p~~~~y-~sK~~~e~~~~~~-----~~~~~  149 (321)
T 3c1o_A          113 DFGCEEDR---------IK----------------------------PLPPFESVL-EKKRIIRRAIEAA-----ALPYT  149 (321)
T ss_dssp             CCSSCGGG---------CC----------------------------CCHHHHHHH-HHHHHHHHHHHHH-----TCCBE
T ss_pred             ccccCccc---------cc----------------------------cCCCcchHH-HHHHHHHHHHHHc-----CCCeE
Confidence            33321100         00                            000124679 9999999988743     56666


Q ss_pred             EeecceeecCcc-----------cC------------CCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          240 CVCPGYVKTEMT-----------YN------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       240 ~v~PG~v~T~~~-----------~~------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      .+.||++.++..           ..            ....+++|+|+.++.++..+.  ..|+.+..
T Consensus       150 ~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~g~~~~~  215 (321)
T 3c1o_A          150 YVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR--CCNRIVIY  215 (321)
T ss_dssp             EEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG--GTTEEEEC
T ss_pred             EEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc--ccCeEEEE
Confidence            777876644321           00            123588999999999988665  33554433

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.40  E-value=1.3e-11  Score=108.65  Aligned_cols=195  Identities=14%  Similarity=0.010  Sum_probs=120.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +||||||+|.||++++++|+++|++|++++|++.+.             .+   ..|     .+      ..+.+..+|.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-------------~~---~~~-----~~------~~~~l~~~d~   54 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-------------RI---TWD-----EL------AASGLPSCDA   54 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------EE---EHH-----HH------HHHCCCSCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-------------ee---ecc-----hh------hHhhccCCCE
Confidence            599999999999999999999999999999986431             11   111     11      1123468999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      +||.||.........                .+.+....++++|+.++.++++.+...  .....++|++||...+....
T Consensus        55 vihla~~~i~~~~~~----------------~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~  116 (298)
T 4b4o_A           55 AVNLAGENILNPLRR----------------WNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSL  116 (298)
T ss_dssp             EEECCCCCSSCTTSC----------------CCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCS
T ss_pred             EEEeccCcccchhhh----------------hhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCC
Confidence            999998643222111                156677788999999999988877432  22334677777765443221


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      ..                               +.. .+..+.+...|+..|...+...   .....++++..+.||.+.
T Consensus       117 ~~-------------------------------~~~-E~~p~~~~~~~~~~~~~~e~~~---~~~~~~~~~~~~r~~~v~  161 (298)
T 4b4o_A          117 TA-------------------------------EYD-EDSPGGDFDFFSNLVTKWEAAA---RLPGDSTRQVVVRSGVVL  161 (298)
T ss_dssp             SC-------------------------------CBC-TTCCCSCSSHHHHHHHHHHHHH---CCSSSSSEEEEEEECEEE
T ss_pred             CC-------------------------------ccc-ccCCccccchhHHHHHHHHHHH---HhhccCCceeeeeeeeEE
Confidence            00                               000 0001122344555555544321   111258899999999888


Q ss_pred             cCcccC----------------------CCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          248 TEMTYN----------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       248 T~~~~~----------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      .+....                      +.....+|+++.+++++..+.  ..|.|-..
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~--~~g~yn~~  218 (298)
T 4b4o_A          162 GRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANH--VHGVLNGV  218 (298)
T ss_dssp             CTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTT--CCEEEEES
T ss_pred             cCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCC--CCCeEEEE
Confidence            773211                      123467999999888877665  56655433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.39  E-value=1.8e-13  Score=120.57  Aligned_cols=110  Identities=17%  Similarity=0.082  Sum_probs=86.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++||||+||||+++++.|+++|++|++++|+.++.++..+++....  .+.++.+|+++.+++.++++      
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~--~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHTT------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEecCCCHHHHHHHHH------
Confidence            4689999999999999999999999999999999999888877777765432  35678899999998877765      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccCh-HHHHHhhhcccchHH
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY-ESAEKCLQTNYLGAK  136 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vNv~~~~  136 (290)
                       .+|+||||||........               .+.+. +.+..++++|+.+++
T Consensus       188 -~~DvlVn~ag~g~~~~~~---------------~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 -GAHFVFTAGAIGLELLPQ---------------AAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -TCSEEEECCCTTCCSBCH---------------HHHTTCTTCCEEEECCCSSSC
T ss_pred             -hCCEEEECCCccccCCCh---------------hHcCchHHHHHHHHhhhhhhH
Confidence             479999999864211100               01133 667789999999988

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.23  E-value=1.2e-11  Score=110.90  Aligned_cols=173  Identities=15%  Similarity=0.073  Sum_probs=108.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      .+++||||+|+||.+++.+|+++|+       .|++.++.+.  +.+.....+....   +.++ .|+++.+++.+.++ 
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~---~~~~-~di~~~~~~~~a~~-   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA---FPLL-AGLEATDDPKVAFK-   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT---CTTE-EEEEEESCHHHHTT-
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccc---cccc-CCeEeccChHHHhC-
Confidence            4799999999999999999999996       7999998752  2222222333211   1122 57766555544443 


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                            ..|+|||.||.....                      .+...+.+++|+.++..+++.+..+-  ....+++++
T Consensus        80 ------~~D~Vih~Ag~~~~~----------------------~~~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~  129 (327)
T 1y7t_A           80 ------DADYALLVGAAPRKA----------------------GMERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVV  129 (327)
T ss_dssp             ------TCSEEEECCCCCCCT----------------------TCCHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEEC
T ss_pred             ------CCCEEEECCCcCCCC----------------------CCCHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEe
Confidence                  689999999975311                      12235689999999999999995431  133578887


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeE
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFC  237 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~  237 (290)
                      |+.......                       ..    ...   +   .+. ++...|+.+|...+.+.+.++..+ ++.
T Consensus       130 snp~~~~~~-----------------------~~----~~~---~---~~~-~p~~~yg~tkl~~er~~~~~a~~~-g~~  174 (327)
T 1y7t_A          130 GNPANTNAL-----------------------IA----YKN---A---PGL-NPRNFTAMTRLDHNRAKAQLAKKT-GTG  174 (327)
T ss_dssp             SSSHHHHHH-----------------------HH----HHT---C---TTS-CGGGEEECCHHHHHHHHHHHHHHH-TCC
T ss_pred             CCchhhhHH-----------------------HH----HHH---c---CCC-ChhheeccchHHHHHHHHHHHHHh-CcC
Confidence            765321110                       00    000   0   011 233569999999999998888766 444


Q ss_pred             EEEeecceeecC
Q 039097          238 INCVCPGYVKTE  249 (290)
Q Consensus       238 vn~v~PG~v~T~  249 (290)
                      +..+.|.+|..+
T Consensus       175 ~~~vr~~~V~G~  186 (327)
T 1y7t_A          175 VDRIRRMTVWGN  186 (327)
T ss_dssp             GGGEECCEEEBC
T ss_pred             hhheeeeEEEcC
Confidence            444444444443

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.10  E-value=5.8e-11  Score=100.21  Aligned_cols=79  Identities=13%  Similarity=0.179  Sum_probs=61.9

Q ss_pred             cCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC
Q 039097            3 ETAKRYAVVTGA----------------NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA   66 (290)
Q Consensus         3 ~~~~k~~lITGg----------------s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~   66 (290)
                      +|+||++|||||                +||||+++|++|+++|++|++++++.. ++     .    ...+  -.+|++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~----~~g~--~~~dv~   72 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T----PPFV--KRVDVM   72 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C----CTTE--EEEECC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c----CCCC--eEEccC
Confidence            588999999999                699999999999999999999988652 11     0    1112  356777


Q ss_pred             CHHHHHHHHHHHHhhcCCccEEEEccccCC
Q 039097           67 DPAAIHSVADFIRSHFGKLDILVNNAGITG   96 (290)
Q Consensus        67 ~~~~v~~~~~~~~~~~~~id~li~~Ag~~~   96 (290)
                      +.+   ++++.+.+.++++|++|||||+..
T Consensus        73 ~~~---~~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           73 TAL---EMEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             SHH---HHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             cHH---HHHHHHHHhcCCCCEEEECCcccC
Confidence            754   466777778899999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.95  E-value=3.3e-09  Score=79.66  Aligned_cols=76  Identities=18%  Similarity=0.161  Sum_probs=62.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++++++|+|+ |++|+++++.|.+.| ++|++++|++++.+...       ...+.++.+|+++.+++.++++      
T Consensus         3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~------   68 (118)
T 3ic5_A            3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-------RMGVATKQVDAKDEAGLAKALG------   68 (118)
T ss_dssp             TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-------TTTCEEEECCTTCHHHHHHHTT------
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-------hCCCcEEEecCCCHHHHHHHHc------
Confidence            45689999999 999999999999999 89999999977655433       1246778999999888777664      


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                       ++|++|++++.
T Consensus        69 -~~d~vi~~~~~   79 (118)
T 3ic5_A           69 -GFDAVISAAPF   79 (118)
T ss_dssp             -TCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999973

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.93  E-value=6.3e-10  Score=94.10  Aligned_cols=80  Identities=10%  Similarity=0.132  Sum_probs=60.2

Q ss_pred             CCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH
Q 039097            5 AKRYAVVTGA----------------NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP   68 (290)
Q Consensus         5 ~~k~~lITGg----------------s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~   68 (290)
                      +||++|||||                +|++|+++|++|+++|++|++++|......        ..+..+     |+.+.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~~~~-----~~~~v   68 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPHPNL-----SIREI   68 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCCTTE-----EEEEC
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCCCCe-----EEEEH
Confidence            5899999999                788999999999999999999999753210        001112     33344


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCC
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGI   97 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~   97 (290)
                      +++.++++.+.+.++++|++|+|||+...
T Consensus        69 ~s~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           69 TNTKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             CSHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             hHHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence            46667777777888899999999998643

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.82  E-value=2e-08  Score=92.41  Aligned_cols=83  Identities=20%  Similarity=0.264  Sum_probs=72.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC---CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g---~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++++|+|+ |+||+++++.|+++|   ..|++.+|+.+++++..+++...++.++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47889999 899999999999998   389999999999888888876554446888999999999999999875     


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ++|+|||+++..
T Consensus        76 ~~DvVin~ag~~   87 (405)
T 4ina_A           76 KPQIVLNIALPY   87 (405)
T ss_dssp             CCSEEEECSCGG
T ss_pred             CCCEEEECCCcc
Confidence            699999999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.79  E-value=4.8e-11  Score=111.05  Aligned_cols=45  Identities=27%  Similarity=0.282  Sum_probs=39.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVE   48 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~   48 (290)
                      ++.||+++|||++ +||+++|++|+..|++|+++++++....++..
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~  306 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM  306 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            4789999999987 99999999999999999999999876655443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.78  E-value=1.3e-08  Score=83.93  Aligned_cols=79  Identities=14%  Similarity=0.157  Sum_probs=57.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++||||+||||.++++.+...|++|++++|++++.+..    +..+..    ..+|.++.+..+++.+....  ++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~  107 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVE----YVGDSRSVDFADEILELTDG--YG  107 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCS----EEEETTCSTHHHHHHHHTTT--CC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC----EEeeCCcHHHHHHHHHHhCC--CC
Confidence            578999999999999999999999999999999987654432    222221    23588776554444433211  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+|+|
T Consensus       108 ~D~vi~~~g  116 (198)
T 1pqw_A          108 VDVVLNSLA  116 (198)
T ss_dssp             EEEEEECCC
T ss_pred             CeEEEECCc
Confidence            999999998

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.71  E-value=1.7e-08  Score=90.30  Aligned_cols=79  Identities=18%  Similarity=0.223  Sum_probs=61.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++|||||+||||.++++.+...|++|++++|++++.+.+ +++   +..    ..+|.++.+++.+.+.++..  ++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~----~~~d~~~~~~~~~~~~~~~~--~~  214 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFD----AAFNYKTVNSLEEALKKASP--DG  214 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS----EEEETTSCSCHHHHHHHHCT--TC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCc----EEEecCCHHHHHHHHHHHhC--CC
Confidence            578999999999999999999999999999999987766554 333   211    34688875555555555433  57


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+|+|
T Consensus       215 ~d~vi~~~g  223 (333)
T 1v3u_A          215 YDCYFDNVG  223 (333)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999999999

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.71  E-value=1.6e-08  Score=80.82  Aligned_cols=78  Identities=15%  Similarity=0.204  Sum_probs=62.9

Q ss_pred             CchhHHHHHHHHHCCCeEEEEecCcccHH---HHHHHHHhcCCCcEEEEEeeCCCH--HHHHHHHHHHHhhcCCccEEEE
Q 039097           16 KGIGYEVVRQLALNGIITVLTARDEKGGL---EAVEKLKHSGFDNVIFHQLDVADP--AAIHSVADFIRSHFGKLDILVN   90 (290)
Q Consensus        16 ~gIG~aia~~L~~~g~~Vi~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~id~li~   90 (290)
                      +-++.+++++|+++|++|++..|+.....   +..+.++..+ .++..+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-CEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-CeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            45889999999999999999988755432   1233343333 4678889999999  9999999999999999 99999


Q ss_pred             ccccC
Q 039097           91 NAGIT   95 (290)
Q Consensus        91 ~Ag~~   95 (290)
                      |||..
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99964

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.64  E-value=4.3e-08  Score=91.37  Aligned_cols=79  Identities=19%  Similarity=0.186  Sum_probs=61.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.++.++..+.    . ..+..+.+|+++.+++.++++       
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~----~-~~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----V-QHSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTT----C-TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHh----c-CCceEEEeecCCHHHHHHHHc-------
Confidence            3578999997 89999999999999999999999997654433222    1 136788999999988877664       


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ++|+|||+++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            699999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.63  E-value=1.6e-07  Score=84.34  Aligned_cols=80  Identities=15%  Similarity=0.084  Sum_probs=61.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+|++|+||.++++.+...|++|++++|++++.+.+ +++   +..    ..+|+++.+++.+.+.++...  +
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~---g~~----~~~d~~~~~~~~~~~~~~~~~--~  238 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI---GGE----VFIDFTKEKDIVGAVLKATDG--G  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT---TCC----EEEETTTCSCHHHHHHHHHTS--C
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc---CCc----eEEecCccHhHHHHHHHHhCC--C
Confidence            578999999999999999999999999999999988766432 232   222    335888666666666665543  7


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       239 ~D~vi~~~g~  248 (347)
T 2hcy_A          239 AHGVINVSVS  248 (347)
T ss_dssp             EEEEEECSSC
T ss_pred             CCEEEECCCc
Confidence            9999999983

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.58  E-value=1.1e-07  Score=86.25  Aligned_cols=108  Identities=18%  Similarity=0.189  Sum_probs=75.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+++++++|+|+ |+||+++++.|...|++|++.+|++++++...+.+    +..   +.+|.++.+++.+++.      
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----g~~---~~~~~~~~~~l~~~~~------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----GGR---VITLTATEANIKKSVQ------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTS---EEEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----Cce---EEEecCCHHHHHHHHh------
Confidence            467899999999 99999999999999999999999987665543322    222   4578888887777664      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       +.|++|++++.....                                   .+..+.+..++.|+  +++.||++++..+
T Consensus       229 -~~DvVi~~~g~~~~~-----------------------------------~~~li~~~~l~~mk--~gg~iV~v~~~~g  270 (369)
T 2eez_A          229 -HADLLIGAVLVPGAK-----------------------------------APKLVTRDMLSLMK--EGAVIVDVAVDQG  270 (369)
T ss_dssp             -HCSEEEECCC------------------------------------------CCSCHHHHTTSC--TTCEEEECC----
T ss_pred             -CCCEEEECCCCCccc-----------------------------------cchhHHHHHHHhhc--CCCEEEEEecCCC
Confidence             589999999953100                                   01223455666665  4689999998754

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.56  E-value=2.8e-08  Score=87.15  Aligned_cols=81  Identities=15%  Similarity=0.193  Sum_probs=60.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++|||++ |+|+++|..|++.| +|++++|+.+++++..+++........ .+.+|+++.          .+.+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~----------~~~~  191 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKF-GEEVKFSGL----------DVDL  191 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCH-HHHEEEECT----------TCCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhccccc-ceeEEEeeH----------HHhh
Confidence            4679999999997 99999999999999 999999998887777766643211010 123455552          3456


Q ss_pred             CCccEEEEccccCC
Q 039097           83 GKLDILVNNAGITG   96 (290)
Q Consensus        83 ~~id~li~~Ag~~~   96 (290)
                      +++|+||||+|...
T Consensus       192 ~~~DilVn~ag~~~  205 (287)
T 1nvt_A          192 DGVDIIINATPIGM  205 (287)
T ss_dssp             TTCCEEEECSCTTC
T ss_pred             CCCCEEEECCCCCC
Confidence            78999999999753

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.55  E-value=1.9e-07  Score=72.70  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=59.6

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |..++.++++|+|+ |.+|+++++.|.++|++|++.+++++..+...+    .   .+.++.+|.++++.++++      
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~---~~~~~~gd~~~~~~l~~~------   66 (141)
T 3llv_A            1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E---GFDAVIADPTDESFYRSL------   66 (141)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEECCTTCHHHHHHS------
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C---CCcEEECCCCCHHHHHhC------
Confidence            55556788999998 779999999999999999999999876554432    1   267788999999876654      


Q ss_pred             hcCCccEEEEccc
Q 039097           81 HFGKLDILVNNAG   93 (290)
Q Consensus        81 ~~~~id~li~~Ag   93 (290)
                      ...+.|++|.+.+
T Consensus        67 ~~~~~d~vi~~~~   79 (141)
T 3llv_A           67 DLEGVSAVLITGS   79 (141)
T ss_dssp             CCTTCSEEEECCS
T ss_pred             CcccCCEEEEecC
Confidence            2347899998777

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.53  E-value=2e-07  Score=83.04  Aligned_cols=79  Identities=11%  Similarity=0.173  Sum_probs=58.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++|||||+|+||.++++.+...|++|++++|++++.+.+.+ +   +..    ..+|.++.+..+++.+....  .+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~----~~~~~~~~~~~~~~~~~~~~--~~  209 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAW----QVINYREEDLVERLKEITGG--KK  209 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCS----EEEETTTSCHHHHHHHHTTT--CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCC----EEEECCCccHHHHHHHHhCC--CC
Confidence            47899999999999999999999999999999998766554432 2   222    23577776555554443211  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+|+|
T Consensus       210 ~D~vi~~~g  218 (327)
T 1qor_A          210 VRVVYDSVG  218 (327)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCc
Confidence            999999999

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.51  E-value=5.9e-08  Score=75.30  Aligned_cols=80  Identities=13%  Similarity=0.130  Sum_probs=57.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.++++++++|+|+ |++|..+++.|.+.|++|++++|+++..+.    +...   ...++.+|.++.+.+.++      
T Consensus         1 m~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~---~~~~~~~d~~~~~~l~~~------   66 (144)
T 2hmt_A            1 MGRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASY---ATHAVIANATEENELLSL------   66 (144)
T ss_dssp             -----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTT---CSEEEECCTTCHHHHHTT------
T ss_pred             CCCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHh---CCEEEEeCCCCHHHHHhc------
Confidence            66788889999998 999999999999999999999998654332    2221   235677899887655433      


Q ss_pred             hcCCccEEEEcccc
Q 039097           81 HFGKLDILVNNAGI   94 (290)
Q Consensus        81 ~~~~id~li~~Ag~   94 (290)
                      ...+.|++|++++.
T Consensus        67 ~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           67 GIRNFEYVIVAIGA   80 (144)
T ss_dssp             TGGGCSEEEECCCS
T ss_pred             CCCCCCEEEECCCC
Confidence            13478999999883

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.49  E-value=6.5e-08  Score=91.86  Aligned_cols=105  Identities=18%  Similarity=0.199  Sum_probs=64.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++|||| ||+|++++..|++.|++|++++|+.+++++..+++.    ..+    .++.+   +.++      ..
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~----~~~----~~~~d---l~~~------~~  422 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG----GKA----LSLTD---LDNY------HP  422 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT----C-C----EETTT---TTTC--------
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----Cce----eeHHH---hhhc------cc
Confidence            467899999999 599999999999999999999999887777665552    112    12222   1110      11


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHH
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAK  136 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~  136 (290)
                      +.+|++|||+|+........           ....+.+.+.+..++++|+.+..
T Consensus       423 ~~~DilVN~agvg~~~~~~~-----------~~~~~~~~~~~~~v~Dvny~p~~  465 (523)
T 2o7s_A          423 EDGMVLANTTSMGMQPNVEE-----------TPISKDALKHYALVFDAVYTPRI  465 (523)
T ss_dssp             CCSEEEEECSSTTCTTCTTC-----------CSSCTTTGGGEEEEEECCCSSSS
T ss_pred             cCceEEEECCCCCCCCCCCC-----------CCCChHHcCcCcEEEEEeeCCcc
Confidence            35899999999742110000           00012256778889999998753

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.48  E-value=4.2e-07  Score=81.15  Aligned_cols=80  Identities=20%  Similarity=0.280  Sum_probs=59.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++||||+|+||.++++.+...|++|++++|++++.+.+. ++   +..    ..+|.++.+..+++.+....  .+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---g~~----~~~d~~~~~~~~~i~~~~~~--~~  214 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL---GCH----HTINYSTQDFAEVVREITGG--KG  214 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS----EEEETTTSCHHHHHHHHHTT--CC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC----EEEECCCHHHHHHHHHHhCC--CC
Confidence            4789999999999999999999999999999999976655443 22   222    23577776555444443211  36


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+|+|.
T Consensus       215 ~d~vi~~~g~  224 (333)
T 1wly_A          215 VDVVYDSIGK  224 (333)
T ss_dssp             EEEEEECSCT
T ss_pred             CeEEEECCcH
Confidence            9999999993

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.42  E-value=1.5e-06  Score=76.91  Aligned_cols=82  Identities=20%  Similarity=0.272  Sum_probs=64.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC---cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD---EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .+++++..+++....+  ..+..+++.+.+++.+.+.  
T Consensus       151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~--~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD--CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS--CEEEEEETTCHHHHHHHHH--
T ss_pred             CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC--CceEEeccchHHHHHhhhc--
Confidence            468999999998 7999999999999999 89999999   7777777777765543  2334456777666555444  


Q ss_pred             HhhcCCccEEEEcccc
Q 039097           79 RSHFGKLDILVNNAGI   94 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~   94 (290)
                           ..|+|||+...
T Consensus       226 -----~aDiIINaTp~  236 (315)
T 3tnl_A          226 -----ESVIFTNATGV  236 (315)
T ss_dssp             -----TCSEEEECSST
T ss_pred             -----CCCEEEECccC
Confidence                 57999998865

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.42  E-value=5.9e-07  Score=80.93  Aligned_cols=80  Identities=20%  Similarity=0.311  Sum_probs=58.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|++++|++++.+.+ +++   +..    ..+|..+.+..+++.+...  -++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~~~~~~--~~~  231 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAA----AGFNYKKEDFSEATLKFTK--GAG  231 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS----EEEETTTSCHHHHHHHHTT--TSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCc----EEEecCChHHHHHHHHHhc--CCC
Confidence            478999999999999999999999999999999998766554 333   222    3467776554444433221  136


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+|+|.
T Consensus       232 ~d~vi~~~G~  241 (354)
T 2j8z_A          232 VNLILDCIGG  241 (354)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCc
Confidence            9999999993

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.41  E-value=5.9e-07  Score=83.95  Aligned_cols=79  Identities=19%  Similarity=0.216  Sum_probs=62.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++++++|+|+ |++|++++..|++. |++|++++|+.+++++..+.    .  .+..+.+|+.+.+++.++++     
T Consensus        20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~--~~~~~~~D~~d~~~l~~~l~-----   87 (467)
T 2axq_A           20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----S--GSKAISLDVTDDSALDKVLA-----   87 (467)
T ss_dssp             ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----G--TCEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----c--CCcEEEEecCCHHHHHHHHc-----
Confidence            567899999997 99999999999998 78999999997766554432    1  25667899999988877765     


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                        ++|+|||+++..
T Consensus        88 --~~DvVIn~tp~~   99 (467)
T 2axq_A           88 --DNDVVISLIPYT   99 (467)
T ss_dssp             --TSSEEEECSCGG
T ss_pred             --CCCEEEECCchh
Confidence              689999999864

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.33  E-value=8.5e-07  Score=77.02  Aligned_cols=76  Identities=16%  Similarity=0.207  Sum_probs=57.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.+++++..+++...+  .+     ++.+.+++       . + 
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~-----~~~~~~~~-------~-~-  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SI-----QALSMDEL-------E-G-  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SE-----EECCSGGG-------T-T-
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--Ce-----eEecHHHh-------c-c-
Confidence            467999999998 799999999999999999999999888777776654322  12     22232221       1 1 


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      +++|+||++++..
T Consensus       179 ~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 HEFDLIINATSSG  191 (271)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             CCCCEEEECCCCC
Confidence            5899999999964

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.32  E-value=4.7e-07  Score=81.11  Aligned_cols=80  Identities=19%  Similarity=0.217  Sum_probs=59.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|++++|++++.+.+.+++   +..    ..+|.++.+++.+.++++..  ++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~----~~~d~~~~~~~~~~~~~~~~--~~  225 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFD----DAFNYKEESDLTAALKRCFP--NG  225 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCS----EEEETTSCSCSHHHHHHHCT--TC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCc----eEEecCCHHHHHHHHHHHhC--CC
Confidence            4789999999999999999999999999999999876655443222   221    23577765555555555432  47


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+|+|
T Consensus       226 ~d~vi~~~g  234 (345)
T 2j3h_A          226 IDIYFENVG  234 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CcEEEECCC
Confidence            999999998

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.25  E-value=3.9e-06  Score=75.49  Aligned_cols=79  Identities=15%  Similarity=0.165  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++   +..    ..+|..+.+..+.+.+..   .++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~~~~~~~~~~~~~~~~~~---~~g  235 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL---GAK----RGINYRSEDFAAVIKAET---GQG  235 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS----EEEETTTSCHHHHHHHHH---SSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCC----EEEeCCchHHHHHHHHHh---CCC
Confidence            4789999999999999999999999999999999987765443 22   322    235666654444443332   347


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       236 ~Dvvid~~g~  245 (353)
T 4dup_A          236 VDIILDMIGA  245 (353)
T ss_dssp             EEEEEESCCG
T ss_pred             ceEEEECCCH
Confidence            9999999993

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.25  E-value=2.8e-06  Score=75.85  Aligned_cols=123  Identities=15%  Similarity=0.096  Sum_probs=82.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecC----cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-------ITVLTARD----EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      +..+++||||+|.||.+++..|+.+|.       .|++.+++    .++++....++...... +   ..|+....+..+
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~-~---~~~i~~~~~~~~   79 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP-L---LAGMTAHADPMT   79 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT-T---EEEEEEESSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc-c---cCcEEEecCcHH
Confidence            346899999999999999999999886       79999998    55455444455442111 1   134444344444


Q ss_pred             HHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCe
Q 039097           74 VADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSAR  153 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~  153 (290)
                      .++       ..|+||+.||....                      ......+.+..|+-....+++.+..+-  ...++
T Consensus        80 al~-------~aD~Vi~~ag~~~~----------------------~g~~r~dl~~~N~~i~~~i~~~i~~~~--~p~a~  128 (329)
T 1b8p_A           80 AFK-------DADVALLVGARPRG----------------------PGMERKDLLEANAQIFTVQGKAIDAVA--SRNIK  128 (329)
T ss_dssp             HTT-------TCSEEEECCCCCCC----------------------TTCCHHHHHHHHHHHHHHHHHHHHHHS--CTTCE
T ss_pred             HhC-------CCCEEEEeCCCCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHHhc--CCCeE
Confidence            443       68999999996421                      111233567889888888888885431  14568


Q ss_pred             EEEEcCCCC
Q 039097          154 IVNVSSSLG  162 (290)
Q Consensus       154 iV~isS~~g  162 (290)
                      ||++|....
T Consensus       129 ii~~SNPv~  137 (329)
T 1b8p_A          129 VLVVGNPAN  137 (329)
T ss_dssp             EEECSSSHH
T ss_pred             EEEccCchH
Confidence            999987553

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.24  E-value=1.1e-06  Score=79.04  Aligned_cols=77  Identities=18%  Similarity=0.210  Sum_probs=56.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +++|||||+|+||.++++.+...|+ +|+++++++++.+.+.+++   +..    ..+|.++.+..+++ .++..  +++
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~----~~~d~~~~~~~~~~-~~~~~--~~~  231 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD----AAINYKKDNVAEQL-RESCP--AGV  231 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS----EEEETTTSCHHHHH-HHHCT--TCE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc----eEEecCchHHHHHH-HHhcC--CCC
Confidence            8999999999999999999999999 9999999876655443322   211    34677764433333 32222  269


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |++|+|+|
T Consensus       232 d~vi~~~G  239 (357)
T 2zb4_A          232 DVYFDNVG  239 (357)
T ss_dssp             EEEEESCC
T ss_pred             CEEEECCC
Confidence            99999999

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.24  E-value=1.5e-06  Score=77.54  Aligned_cols=79  Identities=23%  Similarity=0.262  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|++++|++++.+.+.+++   +..    ..+|.++.+..+.+.+..   .++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~----~~~~~~~~~~~~~~~~~~---~~~  218 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFD----GAIDYKNEDLAAGLKREC---PKG  218 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCS----EEEETTTSCHHHHHHHHC---TTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCC----EEEECCCHHHHHHHHHhc---CCC
Confidence            4889999999999999999999999999999999987665543333   221    235776655444333322   247


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+|+|
T Consensus       219 ~d~vi~~~g  227 (336)
T 4b7c_A          219 IDVFFDNVG  227 (336)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999999

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.23  E-value=3.3e-06  Score=75.94  Aligned_cols=79  Identities=20%  Similarity=0.285  Sum_probs=57.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|+||+|+||.++++.+...|++|++++|++++.+. .+++   +..    ..+|..+.+..+++.+.. . ..+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~---ga~----~~~d~~~~~~~~~~~~~~-~-~~~  239 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQN---GAH----EVFNHREVNYIDKIKKYV-G-EKG  239 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHT---TCS----EEEETTSTTHHHHHHHHH-C-TTC
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHc---CCC----EEEeCCCchHHHHHHHHc-C-CCC
Confidence            47899999999999999999999999999999999776553 2222   222    235777755444443322 1 127


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+|+|
T Consensus       240 ~D~vi~~~G  248 (351)
T 1yb5_A          240 IDIIIEMLA  248 (351)
T ss_dssp             EEEEEESCH
T ss_pred             cEEEEECCC
Confidence            999999999

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.18  E-value=5e-06  Score=74.10  Aligned_cols=80  Identities=18%  Similarity=0.267  Sum_probs=56.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+ +++   +..    ..+|..+.+..+++.+.. . -.+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---ga~----~~~~~~~~~~~~~~~~~~-~-~~g  217 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY---GAE----YLINASKEDILRQVLKFT-N-GKG  217 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCS----EEEETTTSCHHHHHHHHT-T-TSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCc----EEEeCCCchHHHHHHHHh-C-CCC
Confidence            578999999999999999999999999999999987765532 222   222    234666544333333322 1 136


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       218 ~D~vid~~g~  227 (334)
T 3qwb_A          218 VDASFDSVGK  227 (334)
T ss_dssp             EEEEEECCGG
T ss_pred             ceEEEECCCh
Confidence            9999999993

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.16  E-value=3.9e-06  Score=74.53  Aligned_cols=80  Identities=15%  Similarity=0.134  Sum_probs=57.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++   +..    ..+|..+.+..+++.+...  -..
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~----~~~~~~~~~~~~~~~~~~~--~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAW----ETIDYSHEDVAKRVLELTD--GKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS----EEEETTTSCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC----EEEeCCCccHHHHHHHHhC--CCC
Confidence            4789999999999999999999999999999999887665433 22   222    2346666544333333221  126


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       210 ~Dvvid~~g~  219 (325)
T 3jyn_A          210 CPVVYDGVGQ  219 (325)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCh
Confidence            9999999993

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.15  E-value=8.3e-06  Score=75.70  Aligned_cols=84  Identities=19%  Similarity=0.286  Sum_probs=58.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEE--eeCC---------CHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ--LDVA---------DPAAIHS   73 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~--~Dl~---------~~~~v~~   73 (290)
                      .|++|||+||+|+||.++++.+...|++|+++++++++.+.+ ++   .+...+ +-.  .|+.         +.+++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~---lGa~~~-i~~~~~~~~~~~~~~~~~~~~~~~~  294 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RA---LGCDLV-INRAELGITDDIADDPRRVVETGRK  294 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCCCE-EEHHHHTCCTTGGGCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCCEE-EecccccccccccccccccchhhhH
Confidence            478999999999999999999999999999999887665543 22   232211 111  1221         1244555


Q ss_pred             HHHHHHhhcC-CccEEEEccc
Q 039097           74 VADFIRSHFG-KLDILVNNAG   93 (290)
Q Consensus        74 ~~~~~~~~~~-~id~li~~Ag   93 (290)
                      +.+++.+..+ ++|++|+++|
T Consensus       295 ~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          295 LAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHHhCCCceEEEECCC
Confidence            5666665544 6999999999

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.14  E-value=7.3e-06  Score=74.04  Aligned_cols=75  Identities=17%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc---ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE---KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ++|+++||+|+ |+||..+++.+...|++|+++++++   ++.+. .+++   +   ...+  | .+  ++.+.+.+ . 
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~---g---a~~v--~-~~--~~~~~~~~-~-  243 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEET---K---TNYY--N-SS--NGYDKLKD-S-  243 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHH---T---CEEE--E-CT--TCSHHHHH-H-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHh---C---Ccee--c-hH--HHHHHHHH-h-
Confidence            34999999999 9999999999999999999999987   55432 2333   2   2223  6 54  32222222 2 


Q ss_pred             hcCCccEEEEcccc
Q 039097           81 HFGKLDILVNNAGI   94 (290)
Q Consensus        81 ~~~~id~li~~Ag~   94 (290)
                      . +++|++|+++|.
T Consensus       244 ~-~~~d~vid~~g~  256 (366)
T 2cdc_A          244 V-GKFDVIIDATGA  256 (366)
T ss_dssp             H-CCEEEEEECCCC
T ss_pred             C-CCCCEEEECCCC
Confidence            2 589999999994

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.12  E-value=2.4e-05  Score=70.07  Aligned_cols=79  Identities=13%  Similarity=0.181  Sum_probs=56.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++++||+||+|+||.++++.+...|++|+++++++++.+.+. ++   +.+    ..+|..+.+-.+++.+....  .++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~----~~~~~~~~~~~~~v~~~~~~--~g~  234 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAA----HVLNEKAPDFEATLREVMKA--EQP  234 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCS----EEEETTSTTHHHHHHHHHHH--HCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCC----EEEECCcHHHHHHHHHHhcC--CCC
Confidence            379999999999999999999999999999999988766543 33   222    23455554433333332221  279


Q ss_pred             cEEEEcccc
Q 039097           86 DILVNNAGI   94 (290)
Q Consensus        86 d~li~~Ag~   94 (290)
                      |++|+++|.
T Consensus       235 D~vid~~g~  243 (349)
T 3pi7_A          235 RIFLDAVTG  243 (349)
T ss_dssp             CEEEESSCH
T ss_pred             cEEEECCCC
Confidence            999999993

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.10  E-value=3.2e-05  Score=68.87  Aligned_cols=104  Identities=16%  Similarity=0.190  Sum_probs=66.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCC-cEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ..+++||||+|.+|..++..|+.+|  ..|++.+++++  +....++...... .+..    +.+..+..+.++      
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~------   75 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT------   75 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT------
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC------
Confidence            4589999999999999999999998  68999998875  2223334332211 1221    233444444444      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhch
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~  144 (290)
                       ..|++|++||.......                   +   ..+.+.+|+-....+.+.+..
T Consensus        76 -gaDvVi~~ag~~~~~g~-------------------~---r~dl~~~N~~~~~~i~~~i~~  114 (326)
T 1smk_A           76 -GMDLIIVPAGVPRKPGM-------------------T---RDDLFKINAGIVKTLCEGIAK  114 (326)
T ss_dssp             -TCSEEEECCCCCCCSSC-------------------C---CSHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCCEEEEcCCcCCCCCC-------------------C---HHHHHHHHHHHHHHHHHHHHh
Confidence             68999999996321110                   1   123467777777777776643

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.10  E-value=1.6e-05  Score=62.62  Aligned_cols=79  Identities=14%  Similarity=0.103  Sum_probs=58.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |.+++++|.|+ |.+|+.+++.|.+.|+.|+++++++ +..+...+..    ...+.++..|.++.+.++++      ..
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            45678889986 9999999999999999999999985 3332322221    12377889999998876554      12


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      .+.|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36899998876

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.09  E-value=4.5e-06  Score=72.91  Aligned_cols=80  Identities=19%  Similarity=0.203  Sum_probs=59.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.++..+++...... +.+...++.   ++.+.+.     
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~-~~i~~~~~~---~l~~~l~-----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGR-EAVVGVDAR---GIEDVIA-----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTS-CCEEEECST---THHHHHH-----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCC-ceEEEcCHH---HHHHHHh-----
Confidence            578999999998 7999999999999999 7999999999888888877654321 222333332   3333333     


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                        ..|+|||+...
T Consensus       194 --~~DiVInaTp~  204 (283)
T 3jyo_A          194 --AADGVVNATPM  204 (283)
T ss_dssp             --HSSEEEECSST
T ss_pred             --cCCEEEECCCC
Confidence              46999998864

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.09  E-value=7.4e-06  Score=73.42  Aligned_cols=80  Identities=16%  Similarity=0.204  Sum_probs=57.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|+++||+|++|+||.++++.+... |++|+++++++++.+.+ +++   +..    ..+|.++.+..+++ .++... +
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~----~~~~~~~~~~~~~~-~~~~~~-~  239 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA---GAD----YVINASMQDPLAEI-RRITES-K  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH---TCS----EEEETTTSCHHHHH-HHHTTT-S
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCC----EEecCCCccHHHHH-HHHhcC-C
Confidence            5789999999999999999999999 99999999987765544 233   222    23466665443332 222211 4


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|+++|.
T Consensus       240 ~~d~vi~~~g~  250 (347)
T 1jvb_A          240 GVDAVIDLNNS  250 (347)
T ss_dssp             CEEEEEESCCC
T ss_pred             CceEEEECCCC
Confidence            79999999993

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.06  E-value=2.3e-05  Score=69.30  Aligned_cols=83  Identities=22%  Similarity=0.234  Sum_probs=61.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC---cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD---EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .+++++..+++....+..  +...++.+.+...+.+.  
T Consensus       145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~--v~~~~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCV--VTVTDLADQHAFTEALA--  219 (312)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCE--EEEEETTCHHHHHHHHH--
T ss_pred             CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcc--eEEechHhhhhhHhhcc--
Confidence            467999999997 8999999999999998 89999999   777777777776544322  33445555433333333  


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                           ..|+|||+....
T Consensus       220 -----~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -----SADILTNGTKVG  231 (312)
T ss_dssp             -----HCSEEEECSSTT
T ss_pred             -----CceEEEECCcCC
Confidence                 479999987653

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.01  E-value=2.1e-05  Score=71.43  Aligned_cols=77  Identities=12%  Similarity=0.140  Sum_probs=57.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+.+++++|+|+ |+||+++++.+...|++|++.+|++.+++...+.+    +..+   .++..+.+++.+.+.      
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----g~~~---~~~~~~~~~l~~~l~------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----CGRI---HTRYSSAYELEGAVK------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----TTSS---EEEECCHHHHHHHHH------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----CCee---EeccCCHHHHHHHHc------
Confidence            467999999998 99999999999999999999999987665543322    1222   234455566555543      


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                       ..|++|++++.
T Consensus       231 -~aDvVi~~~~~  241 (377)
T 2vhw_A          231 -RADLVIGAVLV  241 (377)
T ss_dssp             -HCSEEEECCCC
T ss_pred             -CCCEEEECCCc
Confidence             57999999885

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.98  E-value=1.6e-05  Score=71.69  Aligned_cols=78  Identities=14%  Similarity=0.128  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+. +   .+..    ..+|..+.+ +.+.+.+..  -++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~---~Ga~----~~~~~~~~~-~~~~~~~~~--~~g  231 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-S---LGCD----RPINYKTEP-VGTVLKQEY--PEG  231 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---TTCS----EEEETTTSC-HHHHHHHHC--TTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-H---cCCc----EEEecCChh-HHHHHHHhc--CCC
Confidence            4789999999999999999999999999999999876654432 2   2322    224555433 333333321  136


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+++|
T Consensus       232 ~D~vid~~g  240 (362)
T 2c0c_A          232 VDVVYESVG  240 (362)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999998

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.98  E-value=2e-05  Score=70.47  Aligned_cols=79  Identities=20%  Similarity=0.216  Sum_probs=57.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+|++|+||.++++.+...|++|++++|++++.+.+. ++   +..    ..+|.++.+-.++ +.++.. ..+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~----~~~d~~~~~~~~~-~~~~~~-~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GAD----ETVNYTHPDWPKE-VRRLTG-GKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCS----EEEETTSTTHHHH-HHHHTT-TTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCC----EEEcCCcccHHHH-HHHHhC-CCC
Confidence            4789999999999999999999999999999999977665543 22   222    2357776542222 222211 137


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|+++|
T Consensus       236 ~d~vi~~~g  244 (343)
T 2eih_A          236 ADKVVDHTG  244 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999999

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.97  E-value=2.5e-05  Score=59.84  Aligned_cols=75  Identities=17%  Similarity=0.272  Sum_probs=55.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +++++|+|+ |.+|..+++.|.+.|++|++.+|+++..+...++    .  .+.++..|.++.+.+.+.      ...+.
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~--~~~~~~~d~~~~~~l~~~------~~~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----I--DALVINGDCTKIKTLEDA------GIEDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----C--SSEEEESCTTSHHHHHHT------TTTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----c--CcEEEEcCCCCHHHHHHc------CcccC
Confidence            457899986 9999999999999999999999987655443322    1  245677898887654331      23478


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |++|.+.+
T Consensus        71 d~vi~~~~   78 (140)
T 1lss_A           71 DMYIAVTG   78 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEeeC
Confidence            99999976

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.96  E-value=2e-05  Score=70.41  Aligned_cols=80  Identities=15%  Similarity=0.162  Sum_probs=57.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+.+ +   +.+    ..+|..+.+..+++.+.. . -.+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~----~~~~~~~~~~~~~~~~~~-~-~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAA----YVIDTSTAPLYETVMELT-N-GIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCS----EEEETTTSCHHHHHHHHT-T-TSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCc----EEEeCCcccHHHHHHHHh-C-CCC
Confidence            47899999999999999999999999999999999887665433 3   222    234666544333333321 1 127


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999994

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.93  E-value=5.5e-05  Score=67.48  Aligned_cols=77  Identities=17%  Similarity=0.116  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+|+ |+||..+++.+...|++|++++|++++.+.+. ++   +..    ..+|..+.+ +.+.+.++.   +.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~~~d~~~~~-~~~~~~~~~---~~  230 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-EL---GAD----LVVNPLKED-AAKFMKEKV---GG  230 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HT---TCS----EEECTTTSC-HHHHHHHHH---SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HC---CCC----EEecCCCcc-HHHHHHHHh---CC
Confidence            4789999999 88999999999999999999999977665432 22   222    235776543 222233222   57


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       231 ~d~vid~~g~  240 (339)
T 1rjw_A          231 VHAAVVTAVS  240 (339)
T ss_dssp             EEEEEESSCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.93  E-value=2.8e-05  Score=67.37  Aligned_cols=76  Identities=20%  Similarity=0.233  Sum_probs=57.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.++..+++...+  .+.  .+|+   +++.       +  
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~--~~~--~~~~---~~~~-------~--  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQ--AVSM---DSIP-------L--  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEE--EEEG---GGCC-------C--
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC--CeE--EeeH---HHhc-------c--
Confidence            467899999998 799999999999999999999999988887777764322  222  2333   1110       1  


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      +..|+||++++..
T Consensus       179 ~~~DivIn~t~~~  191 (272)
T 1p77_A          179 QTYDLVINATSAG  191 (272)
T ss_dssp             SCCSEEEECCCC-
T ss_pred             CCCCEEEECCCCC
Confidence            4799999999964

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.85  E-value=7.3e-05  Score=66.13  Aligned_cols=104  Identities=13%  Similarity=0.059  Sum_probs=65.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEec--CcccHHHHHHHHHh---cCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTAR--DEKGGLEAVEKLKH---SGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r--~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++||||+|.||..++..|+.+|.  .+++.++  +.++++.....+..   ..+..+.+...|    +++.+.      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a------   71 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI------   71 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH------
Confidence            689999999999999999999885  5888888  65444432333322   111122222211    112222      


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhch
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~  144 (290)
                       +...|+|||.||.....                      .....+.+.+|+-....+++.+..
T Consensus        72 -l~gaD~Vi~~Ag~~~~~----------------------g~~r~dl~~~N~~i~~~i~~~i~~  112 (313)
T 1hye_A           72 -IDESDVVIITSGVPRKE----------------------GMSRMDLAKTNAKIVGKYAKKIAE  112 (313)
T ss_dssp             -GTTCSEEEECCSCCCCT----------------------TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -hCCCCEEEECCCCCCCC----------------------CCcHHHHHHHHHHHHHHHHHHHHH
Confidence             33789999999964211                      112245688999998888888854

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.85  E-value=4.5e-05  Score=70.98  Aligned_cols=85  Identities=18%  Similarity=0.266  Sum_probs=60.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEE-Eee--------CCCHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFH-QLD--------VADPAAIHSVA   75 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~-~~D--------l~~~~~v~~~~   75 (290)
                      .|.+|||+||+|+||...++.+...|++|+++++++++++.+ +++   +...+.-. ..|        ..+.++++++.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHH
Confidence            478999999999999999999999999999999887665543 333   22211000 111        24556667777


Q ss_pred             HHHHhhcC--CccEEEEccc
Q 039097           76 DFIRSHFG--KLDILVNNAG   93 (290)
Q Consensus        76 ~~~~~~~~--~id~li~~Ag   93 (290)
                      +.+.+..+  .+|++|.++|
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSC
T ss_pred             HHHHHHhCCCCCcEEEEcCC
Confidence            77776543  7999999998

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.84  E-value=6.5e-05  Score=67.11  Aligned_cols=79  Identities=18%  Similarity=0.163  Sum_probs=54.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||.++++.+...|++|+++++++++.+.+. ++   +..    ...|..  +++.+.+.++... .+
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~----~v~~~~--~~~~~~v~~~~~~-~g  227 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV---GAD----IVLPLE--EGWAKAVREATGG-AG  227 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCS----EEEESS--TTHHHHHHHHTTT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCc----EEecCc--hhHHHHHHHHhCC-CC
Confidence            4789999999999999999999999999999999988765433 33   222    123444  2333333322111 26


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+++|.
T Consensus       228 ~Dvvid~~g~  237 (342)
T 4eye_A          228 VDMVVDPIGG  237 (342)
T ss_dssp             EEEEEESCC-
T ss_pred             ceEEEECCch
Confidence            9999999993

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.83  E-value=1.6e-05  Score=70.04  Aligned_cols=94  Identities=12%  Similarity=0.120  Sum_probs=62.7

Q ss_pred             CCCcE-EEEecCCC-----------------c-hhHHHHHHHHHCCCeEEEEecCcccHH------H--HHHHHHhc--C
Q 039097            4 TAKRY-AVVTGANK-----------------G-IGYEVVRQLALNGIITVLTARDEKGGL------E--AVEKLKHS--G   54 (290)
Q Consensus         4 ~~~k~-~lITGgs~-----------------g-IG~aia~~L~~~g~~Vi~~~r~~~~~~------~--~~~~l~~~--~   54 (290)
                      +.||+ ||||+|..                 | .|.++|+.++.+|+.|+++.+......      .  ..+.+...  .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            56777 99996664                 4 999999999999999999987532110      0  01111110  1


Q ss_pred             CCcEEEEEeeCCCHHHHHHHHHHH------------------------------HhhcCCccEEEEccccCCC
Q 039097           55 FDNVIFHQLDVADPAAIHSVADFI------------------------------RSHFGKLDILVNNAGITGI   97 (290)
Q Consensus        55 ~~~~~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~~~id~li~~Ag~~~~   97 (290)
                      +..+..+.+|+.+.+++.+.+.+.                              .+.++..|++|.+|++...
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            123456777877777766666543                              2446789999999998743

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.82  E-value=0.00016  Score=63.61  Aligned_cols=101  Identities=19%  Similarity=0.104  Sum_probs=65.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEec--CcccHHHHHHHHHhc--CCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTAR--DEKGGLEAVEKLKHS--GFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r--~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++||||+|.+|.+++..|+.+|.  .+++.++  ++++++....++...  ....+.+.. |  +.+    .       
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~----a-------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE----D-------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG----G-------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH----H-------
Confidence            689999999999999999999886  6888898  665554433344332  112233332 2  211    1       


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhch
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIP  144 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~  144 (290)
                      +...|++|+.||.....                      .+...+.+.+|+-....+++.+..
T Consensus        68 ~~~aDvVi~~ag~~~~~----------------------g~~r~dl~~~N~~i~~~i~~~i~~  108 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP----------------------GQTRIDLAGDNAPIMEDIQSSLDE  108 (303)
T ss_dssp             GTTCSEEEECCCCCCCT----------------------TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hCCCCEEEEcCCCCCCC----------------------CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            24789999999964211                      111234588888888888888744

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.82  E-value=2.9e-05  Score=68.26  Aligned_cols=77  Identities=14%  Similarity=0.125  Sum_probs=56.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.+++++..+++.....        ++.+.+++       .+.
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~--------~~~~~~~~-------~~~  201 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS--------AYFSLAEA-------ETR  201 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC--------CEECHHHH-------HHT
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC--------ceeeHHHH-------Hhh
Confidence            567999999998 7899999999999998 899999998887776665422110        11122222       223


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      ....|+||++.+..
T Consensus       202 ~~~aDivIn~t~~~  215 (297)
T 2egg_A          202 LAEYDIIINTTSVG  215 (297)
T ss_dssp             GGGCSEEEECSCTT
T ss_pred             hccCCEEEECCCCC
Confidence            34789999999864

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.76  E-value=2.6e-05  Score=61.48  Aligned_cols=78  Identities=14%  Similarity=0.151  Sum_probs=56.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +..+++++|.|+ |.+|..+++.|.+.|++|++++|+++..+..    ...  ....++..|.++.+.+.+.      ..
T Consensus        16 ~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~----~~~--~g~~~~~~d~~~~~~l~~~------~~   82 (155)
T 2g1u_A           16 KQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRL----NSE--FSGFTVVGDAAEFETLKEC------GM   82 (155)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGS----CTT--CCSEEEESCTTSHHHHHTT------TG
T ss_pred             ccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----Hhc--CCCcEEEecCCCHHHHHHc------Cc
Confidence            456789999986 9999999999999999999999998765432    101  1245667888876544321      12


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      .+.|++|.+.+
T Consensus        83 ~~ad~Vi~~~~   93 (155)
T 2g1u_A           83 EKADMVFAFTN   93 (155)
T ss_dssp             GGCSEEEECSS
T ss_pred             ccCCEEEEEeC
Confidence            36899999887

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.76  E-value=6.1e-05  Score=68.00  Aligned_cols=77  Identities=14%  Similarity=0.113  Sum_probs=56.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++++++|+|+ |++|+++++.+...|++|++++|++++++...+....    .+   .++..+.+++.+.+.       
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~----~~---~~~~~~~~~~~~~~~-------  229 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS----RV---ELLYSNSAEIETAVA-------  229 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG----GS---EEEECCHHHHHHHHH-------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc----ee---EeeeCCHHHHHHHHc-------
Confidence            56789999999 9999999999999999999999998877665443321    12   122234444443332       


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ..|++|++++..
T Consensus       230 ~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 EADLLIGAVLVP  241 (361)
T ss_dssp             TCSEEEECCCCT
T ss_pred             CCCEEEECCCcC
Confidence            689999999863

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.72  E-value=5.4e-05  Score=68.38  Aligned_cols=75  Identities=11%  Similarity=0.138  Sum_probs=57.4

Q ss_pred             CCCc--EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKR--YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k--~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+||  +|+|.|+ |++|+.+|+.|+ +.+.|.+.+|+..+++...        ..+..+.+|+.|.+++.++++     
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~~--------~~~~~~~~d~~d~~~l~~~~~-----   76 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKVK--------EFATPLKVDASNFDKLVEVMK-----   76 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHT--------TTSEEEECCTTCHHHHHHHHT-----
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHHh--------ccCCcEEEecCCHHHHHHHHh-----
Confidence            4444  6899998 999999999886 4589999999976655432        235668899999998888776     


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                        +.|+||++++..
T Consensus        77 --~~DvVi~~~p~~   88 (365)
T 3abi_A           77 --EFELVIGALPGF   88 (365)
T ss_dssp             --TCSEEEECCCGG
T ss_pred             --CCCEEEEecCCc
Confidence              579999998754

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.70  E-value=0.00013  Score=56.39  Aligned_cols=74  Identities=16%  Similarity=0.070  Sum_probs=57.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .++++|.|. |.+|..+++.|.+.|+.|++.+++++..+...+    .   .+.++..|.++.+.++++      ...+.
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhc------CcccC
Confidence            457788886 889999999999999999999999876655432    1   367788999999876553      12367


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            89988877

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.67  E-value=0.00016  Score=61.84  Aligned_cols=81  Identities=16%  Similarity=0.186  Sum_probs=61.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+....+. ++..+.
T Consensus        29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~  107 (249)
T 1jw9_B           29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  107 (249)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence            56789999986 7999999999999998 899999987                   7777777777665433 456666


Q ss_pred             eeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           63 LDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        63 ~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      .++.+ +.+.++++       ..|+||.+..
T Consensus       108 ~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          108 ALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             SCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             ccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            66653 34444433       6899998875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.65  E-value=0.00021  Score=62.18  Aligned_cols=75  Identities=16%  Similarity=0.178  Sum_probs=57.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.++..+++...+  .+...  ++.+   +.         
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~--~~~~~--~~~~---l~---------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG--EVKAQ--AFEQ---LK---------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS--CEEEE--EGGG---CC---------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC--CeeEe--eHHH---hc---------
Confidence            467999999998 7999999999999997 89999999988888887775433  23333  2211   10         


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                       ...|+||++....
T Consensus       186 -~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 -QSYDVIINSTSAS  198 (281)
T ss_dssp             -SCEEEEEECSCCC
T ss_pred             -CCCCEEEEcCcCC
Confidence             3689999988653

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.64  E-value=0.00015  Score=63.45  Aligned_cols=74  Identities=18%  Similarity=0.178  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+.+. ++   +..    ..+|..+.++   +.+++    ++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---ga~----~~~~~~~~~~---~~~~~----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL---GAE----EAATYAEVPE---RAKAW----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT---TCS----EEEEGGGHHH---HHHHT----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCC----EEEECCcchh---HHHHh----cC
Confidence            4789999999999999999999999999999999987766542 22   222    2245554122   22222    57


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|+ +|.
T Consensus       190 ~d~vid-~g~  198 (302)
T 1iz0_A          190 LDLVLE-VRG  198 (302)
T ss_dssp             EEEEEE-CSC
T ss_pred             ceEEEE-CCH
Confidence            999999 883

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.62  E-value=6.1e-05  Score=60.91  Aligned_cols=77  Identities=16%  Similarity=0.181  Sum_probs=57.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.+++++|.| .|.+|..+++.|.+. |++|+++++++++.+...    ..+   +.++.+|.++.+.+.++     ...
T Consensus        37 ~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g---~~~~~gd~~~~~~l~~~-----~~~  103 (183)
T 3c85_A           37 PGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG---RNVISGDATDPDFWERI-----LDT  103 (183)
T ss_dssp             CTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT---CCEEECCTTCHHHHHTB-----CSC
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC---CCEEEcCCCCHHHHHhc-----cCC
Confidence            4567888888 599999999999999 999999999986655432    222   55677899987654432     013


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      .+.|.+|.+.+
T Consensus       104 ~~ad~vi~~~~  114 (183)
T 3c85_A          104 GHVKLVLLAMP  114 (183)
T ss_dssp             CCCCEEEECCS
T ss_pred             CCCCEEEEeCC
Confidence            47899998776

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.60  E-value=0.00022  Score=63.74  Aligned_cols=77  Identities=13%  Similarity=0.113  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||...++.+...|++|+++++++++.+.+. ++   +.+    ..+|..+  ++.+.+.++  ..+.
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~vi~~~~--~~~~~~~~~--~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KM---GAD----IVLNHKE--SLLNQFKTQ--GIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HH---TCS----EEECTTS--CHHHHHHHH--TCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc---CCc----EEEECCc--cHHHHHHHh--CCCC
Confidence            5899999999999999999999999999999999877655433 22   322    1234333  233333333  2237


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.++|
T Consensus       218 ~Dvv~d~~g  226 (346)
T 3fbg_A          218 VDYVFCTFN  226 (346)
T ss_dssp             EEEEEESSC
T ss_pred             ccEEEECCC
Confidence            999999998

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.60  E-value=0.00069  Score=60.80  Aligned_cols=82  Identities=16%  Similarity=0.054  Sum_probs=58.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||+|+ |++|...++.+...|++ |+++++++++.+.+. ++    ...+..+..|-.+.+++.+.+.++.. -.
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l----~~~~~~~~~~~~~~~~~~~~v~~~t~-g~  251 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI----CPEVVTHKVERLSAEESAKKIVESFG-GI  251 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH----CTTCEEEECCSCCHHHHHHHHHHHTS-SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh----chhcccccccccchHHHHHHHHHHhC-CC
Confidence            4789999998 99999999999999997 899999887665433 33    12344455565555555444444322 13


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      ++|++|.++|
T Consensus       252 g~Dvvid~~g  261 (363)
T 3m6i_A          252 EPAVALECTG  261 (363)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.58  E-value=0.00016  Score=64.55  Aligned_cols=76  Identities=17%  Similarity=0.194  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||..+++.+...|++|+++ +++++.+. .+++   +   ...  +| .+.+ +.+.+.+.... ..
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~l---G---a~~--i~-~~~~-~~~~~~~~~~~-~g  216 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRDL---G---ATP--ID-ASRE-PEDYAAEHTAG-QG  216 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHHH---T---SEE--EE-TTSC-HHHHHHHHHTT-SC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHHc---C---CCE--ec-cCCC-HHHHHHHHhcC-CC
Confidence            47899999999999999999999999999998 77665443 2333   2   222  55 3333 33333333221 36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.++|
T Consensus       217 ~D~vid~~g  225 (343)
T 3gaz_A          217 FDLVYDTLG  225 (343)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999998

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.57  E-value=0.00019  Score=64.20  Aligned_cols=79  Identities=15%  Similarity=0.172  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|+++||+|+ |+||..+++.+...|+ +|+++++++++.+.+. ++   +.+    ..+|..+.+ +.+.+.++.. -.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~----~~~~~~~~~-~~~~v~~~~~-g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GAD----YVINPFEED-VVKEVMDITD-GN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCS----EEECTTTSC-HHHHHHHHTT-TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCC----EEECCCCcC-HHHHHHHHcC-CC
Confidence            6789999999 9999999999999999 9999999876654432 33   222    124555433 2222222211 12


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus       236 g~D~vid~~g~  246 (348)
T 2d8a_A          236 GVDVFLEFSGA  246 (348)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.52  E-value=0.00035  Score=62.85  Aligned_cols=78  Identities=19%  Similarity=0.164  Sum_probs=55.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+| +|+||...++.+...|++|+++++++++.+.+ +++   +.+    ..+| .+.+++.+.+.++... .+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~----~vi~-~~~~~~~~~v~~~~~g-~g  257 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GAD----HGIN-RLEEDWVERVYALTGD-RG  257 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCS----EEEE-TTTSCHHHHHHHHHTT-CC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCC----EEEc-CCcccHHHHHHHHhCC-CC
Confidence            478999999 89999999999999999999999987765543 333   322    2245 4434444444443322 26


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.++|
T Consensus       258 ~D~vid~~g  266 (363)
T 3uog_A          258 ADHILEIAG  266 (363)
T ss_dssp             EEEEEEETT
T ss_pred             ceEEEECCC
Confidence            999999998

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.50  E-value=6.4e-05  Score=58.42  Aligned_cols=72  Identities=13%  Similarity=0.179  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+++++|.|+ |++|+++++.|.+.|++|++.+|++++.++..+++.      ...  .+..+   +.+.++       .
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~------~~~--~~~~~---~~~~~~-------~   80 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE------YEY--VLIND---IDSLIK-------N   80 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT------CEE--EECSC---HHHHHH-------T
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC------Cce--EeecC---HHHHhc-------C
Confidence            3789999996 999999999999999999999999888776665542      111  12223   333333       5


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|++|.+.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            89999988753

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.49  E-value=0.0008  Score=58.71  Aligned_cols=90  Identities=17%  Similarity=0.186  Sum_probs=67.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|.+.                  .+.+.+.+.+...++. ++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            467789999975 7999999999999997 799998776                  6667777777666544 677777


Q ss_pred             eeCCCHHHHHHHHHHHHhh----cCCccEEEEccc
Q 039097           63 LDVADPAAIHSVADFIRSH----FGKLDILVNNAG   93 (290)
Q Consensus        63 ~Dl~~~~~v~~~~~~~~~~----~~~id~li~~Ag   93 (290)
                      .++++.+.+.++++.+...    ....|+||.+.-
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            8888877777777654321    136899986654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.48  E-value=0.00024  Score=64.05  Aligned_cols=75  Identities=19%  Similarity=0.247  Sum_probs=55.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+|+ |+||..+++.+...|++|+++++++++.+.+.+++   +.+    ..+|..+.+.+++       ..+.
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~----~v~~~~~~~~~~~-------~~~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GAD----SFLVSRDQEQMQA-------AAGT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCS----EEEETTCHHHHHH-------TTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCc----eEEeccCHHHHHH-------hhCC
Confidence            6889999996 99999999999999999999999988766544333   222    2346666543322       2247


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.++|.
T Consensus       252 ~D~vid~~g~  261 (366)
T 1yqd_A          252 LDGIIDTVSA  261 (366)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCc
Confidence            9999999984

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.48  E-value=0.00093  Score=59.71  Aligned_cols=81  Identities=26%  Similarity=0.185  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHh-hc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRS-HF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~-~~   82 (290)
                      .|+++||+|+ |+||..+++.+...|++|+++++++++.+.+. ++   +.+    ..+|..+ .+..+++.+.... .-
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~~~~~~~~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NC---GAD----VTLVVDPAKEEESSIIERIRSAIG  238 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HT---TCS----EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-Hh---CCC----EEEcCcccccHHHHHHHHhccccC
Confidence            4789999997 89999999999999999999999876654432 22   322    2245553 3323333222210 01


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       239 ~g~D~vid~~g~  250 (352)
T 1e3j_A          239 DLPNVTIDCSGN  250 (352)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999983

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.47  E-value=0.00022  Score=59.41  Aligned_cols=73  Identities=16%  Similarity=0.183  Sum_probs=57.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++|.|+ |.+|..+|+.|.++|+.|++.+++++..++..+..      .+.++..|.++.+.++++      ...+.|+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a------~i~~ad~   68 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDA------EVSKNDV   68 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHH------TCCTTCE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhc------CcccCCE
Confidence            5889996 89999999999999999999999987766543322      367789999998876644      1347899


Q ss_pred             EEEccc
Q 039097           88 LVNNAG   93 (290)
Q Consensus        88 li~~Ag   93 (290)
                      +|.+.+
T Consensus        69 vi~~~~   74 (218)
T 3l4b_C           69 VVILTP   74 (218)
T ss_dssp             EEECCS
T ss_pred             EEEecC
Confidence            997766

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.39  E-value=0.0016  Score=58.59  Aligned_cols=79  Identities=16%  Similarity=0.165  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|+++||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++   +.+    ..+|..+ .+++.+.+.++..  
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~----~vi~~~~~~~~~~~~~~~~~~--  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GAT----DFVNPNDHSEPISQVLSKMTN--  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCC----EEECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh---CCc----eEEeccccchhHHHHHHHHhC--
Confidence            4789999995 9999999999999999 7999999988766433 32   222    2245543 1234444444433  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       261 ~g~D~vid~~g~  272 (374)
T 1cdo_A          261 GGVDFSLECVGN  272 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.36  E-value=0.00068  Score=61.21  Aligned_cols=76  Identities=18%  Similarity=0.306  Sum_probs=52.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+||+|+||..+++.+...|++|++++ ++++.+. .+++   +.+    ..+|..+.+-.    +++.+ .++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~-~~~l---Ga~----~v~~~~~~~~~----~~~~~-~~g  248 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASEL-VRKL---GAD----DVIDYKSGSVE----EQLKS-LKP  248 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHH-HHHT---TCS----EEEETTSSCHH----HHHHT-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHH-HHHc---CCC----EEEECCchHHH----HHHhh-cCC
Confidence            578999999999999999999999999999888 4444332 2332   322    22455554322    23332 257


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.++|.
T Consensus       249 ~D~vid~~g~  258 (375)
T 2vn8_A          249 FDFILDNVGG  258 (375)
T ss_dssp             BSEEEESSCT
T ss_pred             CCEEEECCCC
Confidence            9999999994

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.34  E-value=0.0013  Score=58.05  Aligned_cols=75  Identities=21%  Similarity=0.167  Sum_probs=50.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcCCC-cEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++.|+||+|.+|..++..|+..|  ..|++.|+++  .+....++...... ++....    ...+.++.++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            68999999999999999999988  6899999987  33334445432211 121110    0123333333       6


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|++|+.||..
T Consensus        69 aDvVvi~ag~~   79 (314)
T 1mld_A           69 CDVVVIPAGVP   79 (314)
T ss_dssp             CSEEEECCSCC
T ss_pred             CCEEEECCCcC
Confidence            89999999974

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.30  E-value=0.00082  Score=60.29  Aligned_cols=86  Identities=15%  Similarity=0.117  Sum_probs=53.6

Q ss_pred             CC-cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH--HHHHHHHHHHHh-
Q 039097            5 AK-RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP--AAIHSVADFIRS-   80 (290)
Q Consensus         5 ~~-k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~-   80 (290)
                      .| .++||+||+|++|...++.+...|++|++++++.++..+..+.++..+.+.    .+|..+.  +++.+.+.++.. 
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~----vi~~~~~~~~~~~~~i~~~t~~  241 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ----VITEDQNNSREFGPTIKEWIKQ  241 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE----EEEHHHHHCGGGHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeE----EEecCccchHHHHHHHHHHhhc
Confidence            46 899999999999999999988899999999887765333222333333221    1232220  122222222220 


Q ss_pred             hcCCccEEEEcccc
Q 039097           81 HFGKLDILVNNAGI   94 (290)
Q Consensus        81 ~~~~id~li~~Ag~   94 (290)
                      .-+++|++|.++|.
T Consensus       242 ~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          242 SGGEAKLALNCVGG  255 (364)
T ss_dssp             HTCCEEEEEESSCH
T ss_pred             cCCCceEEEECCCc
Confidence            12479999999983

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.29  E-value=0.0039  Score=55.70  Aligned_cols=79  Identities=20%  Similarity=0.199  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC--CHHHHHHHHHHHHhh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA--DPAAIHSVADFIRSH   81 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~   81 (290)
                      .|.++||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++   +.+    ..+|..  +.++..+.+.+... 
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~----~vi~~~~~~~~~~~~~i~~~~~-  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GAD----LVLQISKESPQEIARKVEGQLG-  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCS----EEEECSSCCHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCC----EEEcCcccccchHHHHHHHHhC-
Confidence            4789999996 8999999999988999 8999999876654332 22   322    223554  22333322222222 


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                       +++|++|.++|.
T Consensus       241 -~g~D~vid~~g~  252 (356)
T 1pl8_A          241 -CKPEVTIECTGA  252 (356)
T ss_dssp             -SCCSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999983

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.28  E-value=0.00038  Score=60.24  Aligned_cols=74  Identities=20%  Similarity=0.262  Sum_probs=55.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.++..+++.. .  .+..+  ++.+   +.       . 
T Consensus       117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~-~--~~~~~--~~~~---l~-------~-  179 (272)
T 3pwz_A          117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH-S--RLRIS--RYEA---LE-------G-  179 (272)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC-T--TEEEE--CSGG---GT-------T-
T ss_pred             CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc-C--CeeEe--eHHH---hc-------c-
Confidence            467999999998 6999999999999996 899999999888887777643 1  23333  2222   11       1 


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                       ...|+|||+...
T Consensus       180 -~~~DivInaTp~  191 (272)
T 3pwz_A          180 -QSFDIVVNATSA  191 (272)
T ss_dssp             -CCCSEEEECSSG
T ss_pred             -cCCCEEEECCCC
Confidence             368999998764

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.27  E-value=0.00042  Score=61.75  Aligned_cols=118  Identities=16%  Similarity=0.133  Sum_probs=71.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--e-----EEEEecCc--ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--I-----TVLTARDE--KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~-----Vi~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      .+++||||+|.||..++..|+..|.  +     +++.|+++  ++++....++......-+.  ....++  +..+.   
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~--~~~~~~--~~~~~---   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK--DVIATD--KEEIA---   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE--EEEEES--CHHHH---
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC--CEEEcC--CcHHH---
Confidence            4799999999999999999998875  5     99999975  3455555555543211121  122221  11222   


Q ss_pred             HHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC-eEEE
Q 039097           78 IRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA-RIVN  156 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~-~iV~  156 (290)
                          +...|++|+.||..- .+                     .+...+.++.|+.....+.+.+..+   ...+ .+++
T Consensus        77 ----~~daDvVvitAg~pr-kp---------------------G~tR~dll~~N~~i~~~i~~~i~~~---~~~~~~viv  127 (333)
T 5mdh_A           77 ----FKDLDVAILVGSMPR-RD---------------------GMERKDLLKANVKIFKCQGAALDKY---AKKSVKVIV  127 (333)
T ss_dssp             ----TTTCSEEEECCSCCC-CT---------------------TCCTTTTHHHHHHHHHHHHHHHHHH---SCTTCEEEE
T ss_pred             ----hCCCCEEEEeCCCCC-CC---------------------CCCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEE
Confidence                236899999998531 11                     1223456777777766666666432   1234 4666


Q ss_pred             EcCC
Q 039097          157 VSSS  160 (290)
Q Consensus       157 isS~  160 (290)
                      +|-.
T Consensus       128 vsNP  131 (333)
T 5mdh_A          128 VGNP  131 (333)
T ss_dssp             CSSS
T ss_pred             cCCc
Confidence            6543

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.26  E-value=0.00045  Score=61.13  Aligned_cols=77  Identities=22%  Similarity=0.158  Sum_probs=50.8

Q ss_pred             Cc-EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KR-YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k-~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      |. ++||+||+|++|..+++.+...|++|+++++++++.+.+. ++   +.+    ..+|..+.+  .+.++++.  -++
T Consensus       149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~----~~i~~~~~~--~~~~~~~~--~~~  216 (328)
T 1xa0_A          149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---GAK----EVLAREDVM--AERIRPLD--KQR  216 (328)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---TCS----EEEECC-----------CC--SCC
T ss_pred             CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc---CCc----EEEecCCcH--HHHHHHhc--CCc
Confidence            44 8999999999999999999999999999999987765542 22   222    123544432  12222221  136


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.++|.
T Consensus       217 ~d~vid~~g~  226 (328)
T 1xa0_A          217 WAAAVDPVGG  226 (328)
T ss_dssp             EEEEEECSTT
T ss_pred             ccEEEECCcH
Confidence            9999999983

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.26  E-value=0.00082  Score=60.05  Aligned_cols=79  Identities=19%  Similarity=0.279  Sum_probs=54.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+++++.|+|++|.+|..+|..++..|.  +|++.|++.++++....++.......     .++.-..+..+.++     
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~-----~~i~~t~d~~~al~-----   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEG-----LNLTFTSDIKEALT-----   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTT-----CCCEEESCHHHHHT-----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCC-----CceEEcCCHHHHhC-----
Confidence            5577899999999999999999999984  79999999887776555554432110     11111112222233     


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                        ..|++|.+||.
T Consensus        76 --dADvVvitaG~   86 (343)
T 3fi9_A           76 --DAKYIVSSGGA   86 (343)
T ss_dssp             --TEEEEEECCC-
T ss_pred             --CCCEEEEccCC
Confidence              68999999996

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.26  E-value=0.0022  Score=56.83  Aligned_cols=77  Identities=14%  Similarity=0.125  Sum_probs=54.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +.+++++.|+|+ |.+|.++|..|+..|.  +|++.++++++++....++.....  ..+.+...|   .          
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----------
Confidence            345678999996 9999999999999987  899999998877765555654321  123332211   1          


Q ss_pred             HhhcCCccEEEEcccc
Q 039097           79 RSHFGKLDILVNNAGI   94 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~   94 (290)
                       +.+...|++|..||.
T Consensus        72 -~a~~~aDiVvi~ag~   86 (326)
T 3vku_A           72 -SDAKDADLVVITAGA   86 (326)
T ss_dssp             -GGGTTCSEEEECCCC
T ss_pred             -HHhcCCCEEEECCCC
Confidence             223478999999996

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.23  E-value=0.00084  Score=61.41  Aligned_cols=73  Identities=16%  Similarity=0.250  Sum_probs=53.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++.|++++|.|+ |++|..+++.|...|+ +|++.+|+.++.++..+++.      ...  ++.   +++.+.+.     
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g------~~~--~~~---~~l~~~l~-----  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------GEA--VRF---DELVDHLA-----  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------CEE--CCG---GGHHHHHH-----
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC------Cce--ecH---HhHHHHhc-----
Confidence            468999999998 9999999999999999 89999999877655555441      111  222   23333332     


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                        ..|+||.+.+.
T Consensus       227 --~aDvVi~at~~  237 (404)
T 1gpj_A          227 --RSDVVVSATAA  237 (404)
T ss_dssp             --TCSEEEECCSS
T ss_pred             --CCCEEEEccCC
Confidence              68999999864

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.17  E-value=0.00039  Score=57.40  Aligned_cols=42  Identities=19%  Similarity=0.229  Sum_probs=36.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~   49 (290)
                      +++|+||+|.+|.++++.|++.|++|++.+|++++.+...++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998776654443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.16  E-value=0.00014  Score=63.08  Aligned_cols=42  Identities=14%  Similarity=0.093  Sum_probs=37.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLE   45 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~   45 (290)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++.+|+.++.++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~  156 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNN  156 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            467899999997 7999999999999999 89999999877554

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.14  E-value=0.0024  Score=56.73  Aligned_cols=76  Identities=16%  Similarity=0.190  Sum_probs=54.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|+++||+|+ |+||...++.+...|++|+++++++++.+.+ ++   .+.+    ..+|..+.+..+++.+    ..++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~---lGa~----~~i~~~~~~~~~~~~~----~~g~  232 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RR---LGAE----VAVNARDTDPAAWLQK----EIGG  232 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HH---TTCS----EEEETTTSCHHHHHHH----HHSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HH---cCCC----EEEeCCCcCHHHHHHH----hCCC
Confidence            5789999997 8999999999999999999999988765533 22   2322    2245555443333332    3358


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|.+|.++|
T Consensus       233 ~d~vid~~g  241 (340)
T 3s2e_A          233 AHGVLVTAV  241 (340)
T ss_dssp             EEEEEESSC
T ss_pred             CCEEEEeCC
Confidence            999999988

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.14  E-value=0.0041  Score=55.12  Aligned_cols=76  Identities=20%  Similarity=0.136  Sum_probs=53.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .+.+++.|+|+ |.+|.++|..|+..|.  .|++.++++++++....++...   .+..+.+...|   .          
T Consensus         3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----------   68 (326)
T 3pqe_A            3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----------   68 (326)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----------
Confidence            34567899996 9999999999999997  8999999988777655555432   11223333222   1          


Q ss_pred             HhhcCCccEEEEcccc
Q 039097           79 RSHFGKLDILVNNAGI   94 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~   94 (290)
                       +.+..-|++|..||.
T Consensus        69 -~a~~~aDvVvi~ag~   83 (326)
T 3pqe_A           69 -EDCKDADIVCICAGA   83 (326)
T ss_dssp             -GGGTTCSEEEECCSC
T ss_pred             -HHhCCCCEEEEeccc
Confidence             123468999999996

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.09  E-value=0.009  Score=51.65  Aligned_cols=42  Identities=17%  Similarity=0.160  Sum_probs=35.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~   49 (290)
                      +++.|.|+ |.+|.++|+.|++.|++|++.+|+++.++...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56666765 8899999999999999999999998887766554

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.08  E-value=0.00055  Score=59.52  Aligned_cols=44  Identities=23%  Similarity=0.187  Sum_probs=38.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAV   47 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~   47 (290)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.+++++..
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La  163 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY  163 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            467999999997 6999999999999998 8999999987765544

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.07  E-value=0.0019  Score=55.16  Aligned_cols=82  Identities=17%  Similarity=0.266  Sum_probs=57.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEE
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFH   61 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~   61 (290)
                      .+++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+....+. ++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            356789999997 6799999999999998 788886543                   5566667777665533 45555


Q ss_pred             EeeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           62 QLDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        62 ~~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      ..++.. +.+.++++       ..|+||.+..
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECCS
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECCC
Confidence            555543 44445544       4799998755

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.01  E-value=0.0032  Score=56.71  Aligned_cols=79  Identities=18%  Similarity=0.217  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|+++||+|+ |+||..+++.+...|+ +|+++++++++.+.+ +++   +.+    ..+|..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~----~vi~~~~~~~~~~~~~~~~~~--  259 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV---GAT----ECVNPQDYKKPIQEVLTEMSN--  259 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCS----EEECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCc----eEecccccchhHHHHHHHHhC--
Confidence            4789999995 9999999999999999 799999998876543 232   222    2245443 1234444444322  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       260 ~g~D~vid~~g~  271 (374)
T 2jhf_A          260 GGVDFSFEVIGR  271 (374)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999983

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.01  E-value=0.00063  Score=60.61  Aligned_cols=77  Identities=14%  Similarity=0.143  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.    +. .+    ..+|..+. ++.+.+.++.  -.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~l-a~----~v~~~~~~-~~~~~~~~~~--~~  230 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR----PY-AD----RLVNPLEE-DLLEVVRRVT--GS  230 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT----TT-CS----EEECTTTS-CHHHHHHHHH--SS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----Hh-HH----hccCcCcc-CHHHHHHHhc--CC
Confidence            6789999999 9999999999999999 8999999876543221    11 11    22455543 3333333332  24


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.++|.
T Consensus       231 g~D~vid~~g~  241 (343)
T 2dq4_A          231 GVEVLLEFSGN  241 (343)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999983

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.00  E-value=0.0013  Score=58.94  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~   83 (290)
                      .|+++||+|+ |+||..+++.+...|++|+++++++++.+.+. ++   +.+    ..+|..+. +.    .+++.   +
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~v~~~~~~~~~----~~~~~---~  242 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GAD----HYIATLEEGDW----GEKYF---D  242 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCS----EEEEGGGTSCH----HHHSC---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc---CCC----EEEcCcCchHH----HHHhh---c
Confidence            4789999999 99999999999989999999999988766543 33   222    12354443 22    22222   4


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.++|.
T Consensus       243 ~~D~vid~~g~  253 (360)
T 1piw_A          243 TFDLIVVCASS  253 (360)
T ss_dssp             CEEEEEECCSC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.99  E-value=0.00074  Score=56.71  Aligned_cols=72  Identities=14%  Similarity=0.121  Sum_probs=55.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .++++|.|+ |.+|..+++.|.++|+ |++++++++..+...        ..+.++.+|.++.+.++++      ...+.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------~~~~~i~gd~~~~~~l~~a------~i~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------SGANFVHGDPTRVSDLEKA------NVRGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------TTCEEEESCTTCHHHHHHT------TCTTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------cCCeEEEcCCCCHHHHHhc------Ccchh
Confidence            567899997 8999999999999999 999999987654432        1377889999998766554      12367


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (234)
T 2aef_A           73 RAVIVDLE   80 (234)
T ss_dssp             SEEEECCS
T ss_pred             cEEEEcCC
Confidence            88888765

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.98  E-value=0.0043  Score=55.84  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++.+.+ +++   +.+    ..+|..+ .+++.+.+.++..  
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~----~vi~~~~~~~~~~~~v~~~~~--  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL---GAT----DCLNPRELDKPVQDVITELTA--  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT---TCS----EEECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh---CCc----EEEccccccchHHHHHHHHhC--
Confidence            4789999995 9999999999999999 799999998876543 232   222    2245443 1234344444332  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       264 ~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 GGVDYSLDCAGT  275 (376)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCccEEEECCCC
Confidence            479999999983

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.98  E-value=0.0027  Score=57.18  Aligned_cols=74  Identities=18%  Similarity=0.191  Sum_probs=54.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+|+ |+||...++.+...|++|+++++++++.+.+. ++   +.+    ..+|..+.+.++    ++.   ++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l---Ga~----~vi~~~~~~~~~----~~~---~g  257 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL---GAD----EVVNSRNADEMA----AHL---KS  257 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH---TCS----EEEETTCHHHHH----TTT---TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCc----EEeccccHHHHH----Hhh---cC
Confidence            4789999997 89999999999999999999999988766543 33   222    224666554322    221   47


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.++|.
T Consensus       258 ~Dvvid~~g~  267 (369)
T 1uuf_A          258 FDFILNTVAA  267 (369)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCC
Confidence            9999999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.97  E-value=0.0018  Score=58.14  Aligned_cols=76  Identities=16%  Similarity=0.201  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh-c
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLAL-NGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH-F   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   82 (290)
                      .|.++||+||+|++|...++.+.. .|++|+++++++++.+.+. +   .+.+    ..+|-.+  ++   .+++.+. .
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~---lGad----~vi~~~~--~~---~~~v~~~~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-S---LGAH----HVIDHSK--PL---AAEVAALGL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-H---TTCS----EEECTTS--CH---HHHHHTTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-H---cCCC----EEEeCCC--CH---HHHHHHhcC
Confidence            588999999999999998887776 5899999999877654432 2   2322    1234433  22   2333332 2


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      +++|++|.++|
T Consensus       238 ~g~Dvvid~~g  248 (363)
T 4dvj_A          238 GAPAFVFSTTH  248 (363)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCceEEEECCC
Confidence            47999999998

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.97  E-value=0.0019  Score=58.39  Aligned_cols=80  Identities=18%  Similarity=0.162  Sum_probs=54.6

Q ss_pred             CCcEEEEec-CCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTG-ANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITG-gs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||.| |+|++|...++.+...|++|+++++++++.+.+. +   .+.+.    .+|..+.+-.+++.+....  .
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~----~~~~~~~~~~~~v~~~t~~--~  239 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-A---QGAVH----VCNAASPTFMQDLTEALVS--T  239 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-H---TTCSC----EEETTSTTHHHHHHHHHHH--H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-h---CCCcE----EEeCCChHHHHHHHHHhcC--C
Confidence            467899997 9999999999999999999999999877655433 2   23221    2455544333333322222  2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus       240 g~d~v~d~~g~  250 (379)
T 3iup_A          240 GATIAFDATGG  250 (379)
T ss_dssp             CCCEEEESCEE
T ss_pred             CceEEEECCCc
Confidence            69999999994

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.97  E-value=0.0087  Score=55.38  Aligned_cols=79  Identities=18%  Similarity=0.202  Sum_probs=54.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++++|+++|.|. |+.|.++|+.|.++|+.|.+.|++........+.++..+   +.+....-  .+   +.       
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~g---i~~~~g~~--~~---~~-------   68 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEG---IKVVCGSH--PL---EL-------   68 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTT---CEEEESCC--CG---GG-------
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCC---CEEEECCC--hH---Hh-------
Confidence            4678999999999 789999999999999999999997643233344554433   33332211  11   01       


Q ss_pred             cCC-ccEEEEccccCC
Q 039097           82 FGK-LDILVNNAGITG   96 (290)
Q Consensus        82 ~~~-id~li~~Ag~~~   96 (290)
                      +.. .|.||.+.|+-.
T Consensus        69 ~~~~~d~vv~spgi~~   84 (451)
T 3lk7_A           69 LDEDFCYMIKNPGIPY   84 (451)
T ss_dssp             GGSCEEEEEECTTSCT
T ss_pred             hcCCCCEEEECCcCCC
Confidence            123 899999999853

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.94  E-value=0.003  Score=56.61  Aligned_cols=78  Identities=18%  Similarity=0.201  Sum_probs=54.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||+|+ |++|...++.+... |++|+++++++++.+.+. ++   +.+    ..+|..+.  +.+.+.++... .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~----~vi~~~~~--~~~~v~~~~~g-~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL---GAD----HVVDARRD--PVKQVMELTRG-R  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT---TCS----EEEETTSC--HHHHHHHHTTT-C
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh---CCC----EEEeccch--HHHHHHHHhCC-C
Confidence            4789999999 89999999999888 999999999877655432 22   322    22465554  33333333221 2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999993

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.92  E-value=0.0037  Score=56.49  Aligned_cols=80  Identities=18%  Similarity=0.092  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC--CHHHHHHHHHHHHhh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA--DPAAIHSVADFIRSH   81 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~   81 (290)
                      .|+++||+| +|++|...++.+...| ++|+++++++++.+.+. ++   +.+    ..+|..  +.+++.+.+.++...
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~----~vi~~~~~~~~~~~~~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI---GAD----LTLNRRETSVEERRKAIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT---TCS----EEEETTTSCHHHHHHHHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc---CCc----EEEeccccCcchHHHHHHHHhCC
Confidence            478999999 8999999999999999 59999999877655432 22   322    123443  234433333332211


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                       ..+|++|.++|.
T Consensus       266 -~g~Dvvid~~g~  277 (380)
T 1vj0_A          266 -RGADFILEATGD  277 (380)
T ss_dssp             -SCEEEEEECSSC
T ss_pred             -CCCcEEEECCCC
Confidence             169999999983

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.91  E-value=0.0027  Score=57.33  Aligned_cols=79  Identities=19%  Similarity=0.175  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++++.+ ++   .+.+    ..+|..+ .+++.+.+.++..  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~---lGa~----~vi~~~~~~~~~~~~i~~~~~--  261 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KK---FGVN----EFVNPKDHDKPIQEVIVDLTD--  261 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HT---TTCC----EEECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCc----EEEccccCchhHHHHHHHhcC--
Confidence            4789999998 9999999999999999 799999998876532 22   2322    1244442 2334444444332  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       262 gg~D~vid~~g~  273 (378)
T 3uko_A          262 GGVDYSFECIGN  273 (378)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999993

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=96.89  E-value=0.0095  Score=52.54  Aligned_cols=80  Identities=21%  Similarity=0.200  Sum_probs=53.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      |.+++..++.|+|+ |.+|..++..|+.+|.  .|++.|+++++++.....+...   .+..+.+.. |  +.+      
T Consensus         1 m~~m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~------   70 (317)
T 3d0o_A            1 MNKFKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYS------   70 (317)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGG------
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHH------
Confidence            67777789999999 9999999999999984  8999999987666433333321   112233222 2  211      


Q ss_pred             HHHHhhcCCccEEEEccccC
Q 039097           76 DFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~   95 (290)
                           .+...|++|..+|..
T Consensus        71 -----a~~~aDvVvi~ag~~   85 (317)
T 3d0o_A           71 -----DCHDADLVVICAGAA   85 (317)
T ss_dssp             -----GGTTCSEEEECCCCC
T ss_pred             -----HhCCCCEEEECCCCC
Confidence                 134789999999863

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.89  E-value=0.0011  Score=59.49  Aligned_cols=83  Identities=18%  Similarity=0.241  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+||+|++|...++.+...|++|+++.+..++.++..+.++..+.+.+    +|-.+. ...+ +.++....++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~v----i~~~~~-~~~~-~~~~~~~~~~  240 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHV----ITEEEL-RRPE-MKNFFKDMPQ  240 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEE----EEHHHH-HSGG-GGGTTSSSCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEE----EecCcc-hHHH-HHHHHhCCCC
Confidence            478999999999999999998888999988887765543333333333343221    232111 0011 1111111225


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.++|
T Consensus       241 ~Dvvid~~g  249 (357)
T 1zsy_A          241 PRLALNCVG  249 (357)
T ss_dssp             CSEEEESSC
T ss_pred             ceEEEECCC
Confidence            899999998

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.86  E-value=0.0086  Score=52.78  Aligned_cols=79  Identities=19%  Similarity=0.103  Sum_probs=51.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC--cccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD--EKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~--~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      +++.+++.|.|+ |.+|.++|..|+..|. +|++.+++  +.+.+....++....   .....+...  .+.        
T Consensus         5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~--------   73 (315)
T 3tl2_A            5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY--------   73 (315)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG--------
T ss_pred             ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH--------
Confidence            456778999997 9999999999999999 99999999  444443333332211   111111111  111        


Q ss_pred             HHHhhcCCccEEEEccccC
Q 039097           77 FIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        77 ~~~~~~~~id~li~~Ag~~   95 (290)
                         +.+...|++|..||.-
T Consensus        74 ---~a~~~aDvVIiaag~p   89 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIA   89 (315)
T ss_dssp             ---GGGTTCSEEEECCSCC
T ss_pred             ---HHhCCCCEEEEeCCCC
Confidence               1235789999999963

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.85  E-value=0.0074  Score=54.28  Aligned_cols=79  Identities=15%  Similarity=0.165  Sum_probs=53.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ..|.++||+||+|++|...++.+...|++|+.+. ++++.+ ..+++   +.+    ..+|..+.+-. +.+.++.  -+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l---Ga~----~vi~~~~~~~~-~~v~~~t--~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR---GAE----EVFDYRAPNLA-QTIRTYT--KN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT---TCS----EEEETTSTTHH-HHHHHHT--TT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc---CCc----EEEECCCchHH-HHHHHHc--cC
Confidence            4688999999999999999999999999998886 555543 33332   322    23455554322 2222222  13


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.++|.
T Consensus       231 ~~d~v~d~~g~  241 (371)
T 3gqv_A          231 NLRYALDCITN  241 (371)
T ss_dssp             CCCEEEESSCS
T ss_pred             CccEEEECCCc
Confidence            69999999993

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.83  E-value=0.0033  Score=57.40  Aligned_cols=42  Identities=14%  Similarity=0.052  Sum_probs=37.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      +.+++++|+|+ |.+|..+++.+...|++|++++|++..++..
T Consensus       170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            56899999996 8999999999999999999999998876654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.82  E-value=0.0097  Score=52.81  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=54.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ...+++.|+|+ |.+|.++|..|+.+|.  .|++.+++.++++....++.+..  .....++..  .|.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----------
Confidence            44678999997 9999999999999997  89999999887776666665431  111122222  1211          


Q ss_pred             hhcCCccEEEEccccC
Q 039097           80 SHFGKLDILVNNAGIT   95 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~   95 (290)
                       .+...|++|..||..
T Consensus        84 -~~~~aDiVvi~aG~~   98 (331)
T 4aj2_A           84 -VTANSKLVIITAGAR   98 (331)
T ss_dssp             -GGTTEEEEEECCSCC
T ss_pred             -HhCCCCEEEEccCCC
Confidence             234789999999963

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.81  E-value=0.0012  Score=59.15  Aligned_cols=75  Identities=20%  Similarity=0.233  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+|+ |+||...++.+...|++|+++++++++.+.+.+++   +.+.    .+|..+.+.+++       ..+.
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~----vi~~~~~~~~~~-------~~~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL---GADD----YVIGSDQAKMSE-------LADS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS---CCSC----EEETTCHHHHHH-------STTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc---CCce----eeccccHHHHHH-------hcCC
Confidence            5889999995 99999999999989999999999887655433222   2221    235555433222       2247


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.++|.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.81  E-value=0.0027  Score=57.07  Aligned_cols=79  Identities=18%  Similarity=0.203  Sum_probs=54.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|.++||+|+ |+||..+++.+...|+ +|+++++++++.+.+. ++   +.+    ..+|..+ .+++.+.+.++..  
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~----~vi~~~~~~~~~~~~v~~~~~--  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GAT----ECINPQDFSKPIQEVLIEMTD--  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCS----EEECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCc----eEeccccccccHHHHHHHHhC--
Confidence            4789999996 9999999999988999 7999999988766543 33   222    1235443 1234444443322  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       259 ~g~D~vid~~g~  270 (373)
T 2fzw_A          259 GGVDYSFECIGN  270 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999983

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.79  E-value=0.0054  Score=55.12  Aligned_cols=79  Identities=22%  Similarity=0.231  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|.+|||+|+ |+||...++.+...|+ +|+++++++++.+.+. ++   +.+    ..+|..+ .+++.+.+.++..  
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~----~vi~~~~~~~~~~~~i~~~t~--  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL---GAT----ECLNPKDYDKPIYEVICEKTN--  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT---TCS----EEECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCc----EEEecccccchHHHHHHHHhC--
Confidence            4789999995 9999999999888999 7999999987765432 32   222    1234443 1233333333322  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus       260 gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 GGVDYAVECAGR  271 (373)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999983

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.75  E-value=0.0024  Score=56.89  Aligned_cols=69  Identities=22%  Similarity=0.325  Sum_probs=50.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+|+ |+||...++.+...|++|+++++++++.+.+. ++   +.+.+  +    ++.+.+.+          +
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v--~----~~~~~~~~----------~  234 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM---GVKHF--Y----TDPKQCKE----------E  234 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT---TCSEE--E----SSGGGCCS----------C
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc---CCCee--c----CCHHHHhc----------C
Confidence            5789999997 99999999999999999999999988766432 22   32222  2    34332221          7


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.++|.
T Consensus       235 ~D~vid~~g~  244 (348)
T 3two_A          235 LDFIISTIPT  244 (348)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCc
Confidence            9999999984

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.74  E-value=0.0029  Score=56.25  Aligned_cols=76  Identities=22%  Similarity=0.229  Sum_probs=52.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC--CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN--GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .|.++||+|+ |+||...++.+...  |++|+++++++++.+.+. ++   +.+.    .+|..+.   ..+.+++.. -
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~----vi~~~~~---~~~~~~~~~-g  236 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADY----VSEMKDA---ESLINKLTD-G  236 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSE----EECHHHH---HHHHHHHHT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCE----Eeccccc---hHHHHHhhc-C
Confidence            6889999999 89999999999988  999999999877655432 33   2221    1233320   122333332 1


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      .++|++|.++|
T Consensus       237 ~g~D~vid~~g  247 (344)
T 2h6e_A          237 LGASIAIDLVG  247 (344)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCccEEEECCC
Confidence            27999999998

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.72  E-value=0.004  Score=56.09  Aligned_cols=76  Identities=22%  Similarity=0.310  Sum_probs=52.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh---
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS---   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~---   80 (290)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+. .+++   +..    ...|.++.+-    .+.+.+   
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-a~~l---Ga~----~vi~~~~~~~----~~~i~~~~~  248 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRL-AEEV---GAT----ATVDPSAGDV----VEAIAGPVG  248 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHH-HHHH---TCS----EEECTTSSCH----HHHHHSTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-HHHc---CCC----EEECCCCcCH----HHHHHhhhh
Confidence            4789999998 9999999999999999 78888888766543 3333   222    2245555432    222222   


Q ss_pred             -hcCCccEEEEccc
Q 039097           81 -HFGKLDILVNNAG   93 (290)
Q Consensus        81 -~~~~id~li~~Ag   93 (290)
                       ..+++|++|.++|
T Consensus       249 ~~~gg~Dvvid~~G  262 (370)
T 4ej6_A          249 LVPGGVDVVIECAG  262 (370)
T ss_dssp             SSTTCEEEEEECSC
T ss_pred             ccCCCCCEEEECCC
Confidence             1237999999998

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.69  E-value=0.0047  Score=56.28  Aligned_cols=79  Identities=22%  Similarity=0.246  Sum_probs=52.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++   +.+    ..+|..+.+-.+++ .++.. -.
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~l---Ga~----~vi~~~~~~~~~~i-~~~t~-g~  281 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KEL---GAD----HVIDPTKENFVEAV-LDYTN-GL  281 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCS----EEECTTTSCHHHHH-HHHTT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCC----EEEcCCCCCHHHHH-HHHhC-CC
Confidence            4789999998 9999999999999999 899999887665433 333   322    22355444322222 22211 12


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.++|.
T Consensus       282 g~D~vid~~g~  292 (404)
T 3ip1_A          282 GAKLFLEATGV  292 (404)
T ss_dssp             CCSEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999983

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.69  E-value=0.0089  Score=52.90  Aligned_cols=78  Identities=19%  Similarity=0.148  Sum_probs=52.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .|+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++....   .....+...  .|.+         
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~---------   71 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA---------   71 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG---------
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH---------
Confidence            356678999998 9999999999999998 99999999987764444443321   111222211  1211         


Q ss_pred             HhhcCCccEEEEcccc
Q 039097           79 RSHFGKLDILVNNAGI   94 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~   94 (290)
                        .+..-|++|..+|.
T Consensus        72 --a~~~aDiVIiaag~   85 (324)
T 3gvi_A           72 --AIEGADVVIVTAGV   85 (324)
T ss_dssp             --GGTTCSEEEECCSC
T ss_pred             --HHCCCCEEEEccCc
Confidence              22468999999985

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.67  E-value=0.0019  Score=56.88  Aligned_cols=74  Identities=12%  Similarity=0.205  Sum_probs=51.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|+||+|++|...++.+...|++|+.+++.. + .+..+++   +.+    ..+|..+.+.+.+       ...+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l---Ga~----~~i~~~~~~~~~~-------~~~g  215 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL---GAE----QCINYHEEDFLLA-------ISTP  215 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH---TCS----EEEETTTSCHHHH-------CCSC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc---CCC----EEEeCCCcchhhh-------hccC
Confidence            578999999999999999999999999999887543 2 2333333   322    1345555442222       2257


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.+.|.
T Consensus       216 ~D~v~d~~g~  225 (321)
T 3tqh_A          216 VDAVIDLVGG  225 (321)
T ss_dssp             EEEEEESSCH
T ss_pred             CCEEEECCCc
Confidence            9999999983

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=96.66  E-value=0.0084  Score=53.27  Aligned_cols=89  Identities=19%  Similarity=0.137  Sum_probs=56.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+....+. ++..+.
T Consensus        32 L~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~  110 (340)
T 3rui_A           32 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  110 (340)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEe
Confidence            46788999876 7999999999999997 788887653                   4566667777666543 455555


Q ss_pred             eeC-------CCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           63 LDV-------ADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        63 ~Dl-------~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      .++       ++++..+.-.+.+.+.+...|+||.+.-
T Consensus       111 ~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tD  148 (340)
T 3rui_A          111 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  148 (340)
T ss_dssp             CCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             ccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCC
Confidence            544       2211111111112222235799998765

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.62  E-value=0.0034  Score=56.12  Aligned_cols=75  Identities=15%  Similarity=0.193  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHH-HHHH-HHCCCe-EEEEecCcc---cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEV-VRQL-ALNGII-TVLTARDEK---GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~ai-a~~L-~~~g~~-Vi~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++.++||+|+ |+||... ++.+ ...|++ |++++++++   +.+.+ +++   +   ...+  |..+.+ +.+ +.++
T Consensus       172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l---G---a~~v--~~~~~~-~~~-i~~~  239 (357)
T 2b5w_A          172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL---D---ATYV--DSRQTP-VED-VPDV  239 (357)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT---T---CEEE--ETTTSC-GGG-HHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc---C---Cccc--CCCccC-HHH-HHHh
Confidence            3489999999 9999999 8877 677997 999999877   55443 332   2   2223  655432 333 3443


Q ss_pred             HhhcCCccEEEEcccc
Q 039097           79 RSHFGKLDILVNNAGI   94 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~   94 (290)
                         .+++|++|.++|.
T Consensus       240 ---~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 ---YEQMDFIYEATGF  252 (357)
T ss_dssp             ---SCCEEEEEECSCC
T ss_pred             ---CCCCCEEEECCCC
Confidence               2479999999983

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.58  E-value=0.011  Score=50.10  Aligned_cols=77  Identities=16%  Similarity=0.226  Sum_probs=58.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +++|.|++|.+|+.+++.+.+. ++.|+.......++++...    ...+    +.+|++.++.+.+.+..+.+.  +++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D----vvIDfT~p~a~~~~~~~a~~~--g~~   71 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE----VVIDFTHPDVVMGNLEFLIDN--GIH   71 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC----EEEECSCTTTHHHHHHHHHHT--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc----EEEEccChHHHHHHHHHHHHc--CCC
Confidence            5899999999999999999876 8888765544444444332    1112    789999999999888887776  789


Q ss_pred             EEEEcccc
Q 039097           87 ILVNNAGI   94 (290)
Q Consensus        87 ~li~~Ag~   94 (290)
                      +||-..|+
T Consensus        72 ~VigTTG~   79 (245)
T 1p9l_A           72 AVVGTTGF   79 (245)
T ss_dssp             EEECCCCC
T ss_pred             EEEcCCCC
Confidence            99988885

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.56  E-value=0.0044  Score=56.24  Aligned_cols=79  Identities=16%  Similarity=0.209  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||.|+ |+||...++.+...|+ +|+++++++++++.+ +++   +   ..  .+|.++.+.+.+.+.++... .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~l---G---a~--~i~~~~~~~~~~~v~~~t~g-~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQ---G---FE--IADLSLDTPLHEQIAALLGE-P  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT---T---CE--EEETTSSSCHHHHHHHHHSS-S
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHc---C---Cc--EEccCCcchHHHHHHHHhCC-C
Confidence            4789999995 9999999999888999 688889987765543 232   2   22  24655443233323322211 2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (398)
T 1kol_A          254 EVDCAVDAVGF  264 (398)
T ss_dssp             CEEEEEECCCT
T ss_pred             CCCEEEECCCC
Confidence            69999999985

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.54  E-value=0.015  Score=51.55  Aligned_cols=74  Identities=19%  Similarity=0.078  Sum_probs=50.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---C--CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---G--FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++.|.|| |.+|.++|..|+..|+ .|++.++++++++.....+...   .  ..++.. .   +|   .++.++    
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d---~~ea~~----   77 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YS---YEAALT----   77 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CS---HHHHHT----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CC---HHHHhC----
Confidence            47899998 9999999999999998 9999999988777643333221   1  112221 1   22   222232    


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                         ..|++|..+|..
T Consensus        78 ---~aDiVi~a~g~p   89 (331)
T 1pzg_A           78 ---GADCVIVTAGLT   89 (331)
T ss_dssp             ---TCSEEEECCSCS
T ss_pred             ---CCCEEEEccCCC
Confidence               679999999863

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.52  E-value=0.0044  Score=55.57  Aligned_cols=81  Identities=26%  Similarity=0.295  Sum_probs=57.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      +++++|+|.|+ ||+|.++++.|+..|. ++.++|++.                   .+.+.+.+.+....+. ++..+.
T Consensus       116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~  194 (353)
T 3h5n_A          116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIA  194 (353)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEE
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEee
Confidence            55788999987 8999999999999997 788888763                   3455566666655543 566777


Q ss_pred             eeCCCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           63 LDVADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        63 ~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      .++.+..++.+        +...|+||.+..
T Consensus       195 ~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          195 LNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             CCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             cccCchhhhhH--------hccCCEEEEecC
Confidence            77766543221        357888888653

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.52  E-value=0.0034  Score=57.55  Aligned_cols=60  Identities=15%  Similarity=0.068  Sum_probs=44.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      +.+++|.|. |.+|..+++.|.+.|+.|++++++++..+...+    .   .+.++.+|.++.+.+++
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~---g~~vi~GDat~~~~L~~   63 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F---GMKVFYGDATRMDLLES   63 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T---TCCCEESCTTCHHHHHH
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C---CCeEEEcCCCCHHHHHh
Confidence            456889986 779999999999999999999999877665432    1   14455666666654443

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.50  E-value=0.0043  Score=53.46  Aligned_cols=43  Identities=21%  Similarity=0.240  Sum_probs=39.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      +|+++|.|+ ||.|++++..|++.|.+|.+..|+.++.++.. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            789999997 99999999999999999999999999888766 54

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.49  E-value=0.022  Score=50.31  Aligned_cols=77  Identities=16%  Similarity=0.131  Sum_probs=52.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |+.+++.|+|+ |.+|.++|..|+..|. +|++.++++++++....++.+..   .....+...  .+.+          
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----------   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----------   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----------
Confidence            44567888884 9999999999999988 99999999988765555554321   111222211  1211          


Q ss_pred             hhcCCccEEEEcccc
Q 039097           80 SHFGKLDILVNNAGI   94 (290)
Q Consensus        80 ~~~~~id~li~~Ag~   94 (290)
                       .+..-|++|..||.
T Consensus        70 -a~~~aDvVIi~ag~   83 (321)
T 3p7m_A           70 -DLENSDVVIVTAGV   83 (321)
T ss_dssp             -GGTTCSEEEECCSC
T ss_pred             -HHCCCCEEEEcCCc
Confidence             23368999999985

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.44  E-value=0.024  Score=48.96  Aligned_cols=86  Identities=16%  Similarity=0.088  Sum_probs=58.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCcccHHHHHHHHH--------h-cCCCcEEEEEeeCCCHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDEKGGLEAVEKLK--------H-SGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~~~~~~~~~~l~--------~-~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      .+++.|.|+ |.+|.++++.|++.|+   +|++.+|++++.+...++..        + .....+.++.+   .++.+.+
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            456777776 9999999999999998   89999999988776655321        0 01123444433   4567778


Q ss_pred             HHHHHHhh-cCCccEEEEccccC
Q 039097           74 VADFIRSH-FGKLDILVNNAGIT   95 (290)
Q Consensus        74 ~~~~~~~~-~~~id~li~~Ag~~   95 (290)
                      +++++... ...=.++|++++-.
T Consensus        79 vl~~l~~~~l~~~~iiiS~~agi  101 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAVGV  101 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCTTC
T ss_pred             HHHHHHhhccCCCeEEEEecCCC
Confidence            88887765 43323788776643

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.44  E-value=0.0061  Score=55.23  Aligned_cols=43  Identities=12%  Similarity=0.091  Sum_probs=37.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++.+|++.+.+.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            457899999996 8999999999999999999999998776654

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.41  E-value=0.0038  Score=54.41  Aligned_cols=41  Identities=22%  Similarity=0.195  Sum_probs=36.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL   44 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~   44 (290)
                      ++.|++++|.|. |.||+++|+.|...|++|++.+|+..+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~  192 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLA  192 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence            578999999994 89999999999999999999999976543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.40  E-value=0.054  Score=48.25  Aligned_cols=80  Identities=20%  Similarity=0.134  Sum_probs=50.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCccc--HHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEKG--GLEAVEKLKHSG-FDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~~--~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~   73 (290)
                      ++.-+|.|+||+|+||..++.+|+....       .+.+.|.++..  ++-..-++.... +........  ++.   .+
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~---~~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP---RV   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH---HH
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh---HH
Confidence            4556899999999999999999998753       68899987642  333333444322 111222221  121   11


Q ss_pred             HHHHHHhhcCCccEEEEccccC
Q 039097           74 VADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag~~   95 (290)
                             .+..-|++|..||.-
T Consensus        97 -------a~~~advVvi~aG~p  111 (345)
T 4h7p_A           97 -------AFDGVAIAIMCGAFP  111 (345)
T ss_dssp             -------HTTTCSEEEECCCCC
T ss_pred             -------HhCCCCEEEECCCCC
Confidence                   234789999999964

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.38  E-value=0.018  Score=50.78  Aligned_cols=74  Identities=19%  Similarity=0.215  Sum_probs=49.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..++.|+|+ |.+|..++..|+..|.  +|++.|+++++++....++.+..  ...+.+..   .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CCH-----------HH
Confidence            357889998 9999999999999997  89999999877665555554432  11222211   111           12


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                      +..-|++|..+|.
T Consensus        72 ~~~aDvVii~~g~   84 (318)
T 1y6j_A           72 VKDCDVIVVTAGA   84 (318)
T ss_dssp             GTTCSEEEECCCC
T ss_pred             hCCCCEEEEcCCC
Confidence            3478999999986

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.37  E-value=0.0018  Score=55.40  Aligned_cols=40  Identities=23%  Similarity=0.213  Sum_probs=34.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLE   45 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~   45 (290)
                      +++ +++|.|+ ||.|++++..|++.|+ +|++.+|+.++.++
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~  147 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKA  147 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            457 8999987 8999999999999998 89999999765443

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.35  E-value=0.015  Score=55.50  Aligned_cols=89  Identities=19%  Similarity=0.137  Sum_probs=58.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      +++.+|+|.|+ ||+|.++|+.|+..|. ++.++|++.                   .+.+.+.+.+....+. ++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            56788999986 7999999999999997 788988754                   4566677777766543 455555


Q ss_pred             eeC-------CCHHHHHHHHHHHHhhcCCccEEEEccc
Q 039097           63 LDV-------ADPAAIHSVADFIRSHFGKLDILVNNAG   93 (290)
Q Consensus        63 ~Dl-------~~~~~v~~~~~~~~~~~~~id~li~~Ag   93 (290)
                      .++       ++++..+--.+.+.+.+...|+||.+.-
T Consensus       403 ~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tD  440 (615)
T 4gsl_A          403 LSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD  440 (615)
T ss_dssp             CCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCS
T ss_pred             ccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCC
Confidence            544       2221111111222222335799998866

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.32  E-value=0.013  Score=52.59  Aligned_cols=77  Identities=18%  Similarity=0.217  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|+++||+|+ |+||...++.+...|+ +|+++++++++.+.+ +++   +.+    ..+|..+.+-.++ +.++.  .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~----~vi~~~~~~~~~~-~~~~~--~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT----HVINSKTQDPVAA-IKEIT--DG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS----EEEETTTSCHHHH-HHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc---CCC----EEecCCccCHHHH-HHHhc--CC
Confidence            4789999995 9999999999888899 699999987765543 333   222    1234444332222 22221  13


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      .+|++|.++|
T Consensus       258 g~D~vid~~g  267 (371)
T 1f8f_A          258 GVNFALESTG  267 (371)
T ss_dssp             CEEEEEECSC
T ss_pred             CCcEEEECCC
Confidence            7999999998

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.30  E-value=0.0061  Score=54.82  Aligned_cols=47  Identities=17%  Similarity=0.155  Sum_probs=40.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      +++||+++|.|. |.+|..+|+.|.+.|++|++.+++.+++++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999986 88999999999999999999999887766655553

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.29  E-value=0.0066  Score=54.08  Aligned_cols=79  Identities=11%  Similarity=0.039  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||+|+ |+||...++.+...|+ +|+++++++++.+. .+++   +.+    ..+|..+.+-.+++.+ +.. -.
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~l---Ga~----~vi~~~~~~~~~~v~~-~t~-g~  234 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEY---GAT----DIINYKNGDIVEQILK-ATD-GK  234 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHH---TCC----EEECGGGSCHHHHHHH-HTT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHh---CCc----eEEcCCCcCHHHHHHH-HcC-CC
Confidence            4789999985 9999999999998999 79999988765543 2333   322    2244444332222222 111 12


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.++|.
T Consensus       235 g~D~v~d~~g~  245 (352)
T 3fpc_A          235 GVDKVVIAGGD  245 (352)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.25  E-value=0.03  Score=49.59  Aligned_cols=78  Identities=15%  Similarity=0.129  Sum_probs=50.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+++|+|+ |++|...++.+... |.+|+++++++++.+.+ ++   .+.+.    ..|-.+ + ..+.+.++... .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~---lGa~~----~i~~~~-~-~~~~v~~~t~g-~  238 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-RE---VGADA----AVKSGA-G-AADAIRELTGG-Q  238 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HH---TTCSE----EEECST-T-HHHHHHHHHGG-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HH---cCCCE----EEcCCC-c-HHHHHHHHhCC-C
Confidence            4789999998 99999999888777 68999999998765533 22   23221    123332 2 22222222211 2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.++|.
T Consensus       239 g~d~v~d~~G~  249 (345)
T 3jv7_A          239 GATAVFDFVGA  249 (345)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCeEEEECCCC
Confidence            79999999993

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.25  E-value=0.0047  Score=56.11  Aligned_cols=79  Identities=16%  Similarity=0.210  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.++||.|+ |+||...++.+...|+ +|+++++++++.+.+    ++.+   ..  .+|..+.+.+.+.+.++... .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lG---a~--~i~~~~~~~~~~~~~~~~~g-~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAG---FE--TIDLRNSAPLRDQIDQILGK-P  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTT---CE--EEETTSSSCHHHHHHHHHSS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcC---Cc--EEcCCCcchHHHHHHHHhCC-C
Confidence            4789999996 9999999998888899 899999987765432    2222   22  24655433212222222211 2


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus       254 g~Dvvid~~g~  264 (398)
T 2dph_A          254 EVDCGVDAVGF  264 (398)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.25  E-value=0.0048  Score=54.42  Aligned_cols=41  Identities=24%  Similarity=0.280  Sum_probs=36.1

Q ss_pred             Cc-EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            6 KR-YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         6 ~k-~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      |+ ++||+||+|+||..+++.+...|++|+++++++++.+.+
T Consensus       150 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          150 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            44 899999999999999999999999999999998776543

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.24  E-value=0.031  Score=49.51  Aligned_cols=76  Identities=14%  Similarity=0.137  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC--CCcEEEE-EeeCCCHHHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG--FDNVIFH-QLDVADPAAIHSVADFIR   79 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~-~~Dl~~~~~v~~~~~~~~   79 (290)
                      ..+++.|+|+ |.+|..+|..|+..|.  .|++.++++++++....++.+..  .....+. ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3568999999 9999999999999997  89999999887776555554321  1111222 223221            


Q ss_pred             hhcCCccEEEEccccC
Q 039097           80 SHFGKLDILVNNAGIT   95 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~   95 (290)
                        +...|++|..||.-
T Consensus        87 --~~daDiVIitaG~p  100 (330)
T 3ldh_A           87 --SAGSKLVVITAGAR  100 (330)
T ss_dssp             --CSSCSEEEECCSCC
T ss_pred             --hCCCCEEEEeCCCC
Confidence              34689999999963

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.23  E-value=0.02  Score=49.72  Aligned_cols=84  Identities=10%  Similarity=-0.003  Sum_probs=58.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH-------HHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-------LKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      +++.|.| .|.+|..+|+.|++.|++|++.+|++++.+...+.       +.+.. . ..++..=+.+...++++++++.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~-~-aDvvi~~vp~~~~~~~v~~~l~   92 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVA-A-ADLIHITVLDDAQVREVVGELA   92 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHT-T-SSEEEECCSSHHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHH-h-CCEEEEECCChHHHHHHHHHHH
Confidence            4566776 68999999999999999999999999887765432       11111 1 3344444566778888888877


Q ss_pred             hhcCCccEEEEccc
Q 039097           80 SHFGKLDILVNNAG   93 (290)
Q Consensus        80 ~~~~~id~li~~Ag   93 (290)
                      ....+=.++|+...
T Consensus        93 ~~l~~g~ivv~~st  106 (296)
T 3qha_A           93 GHAKPGTVIAIHST  106 (296)
T ss_dssp             TTCCTTCEEEECSC
T ss_pred             HhcCCCCEEEEeCC
Confidence            65544456676654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.22  E-value=0.0072  Score=52.77  Aligned_cols=74  Identities=20%  Similarity=0.077  Sum_probs=49.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHh---cCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKH---SGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+|+ |.+|.++|..|+..|.  +|++.++++++++....++..   .......+...  +|.+    .       +
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a-------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----L-------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----G-------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH----H-------h
Confidence            5889999 9999999999999998  899999998876532223322   12222222211  1221    2       2


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||.-
T Consensus        68 ~~aDiVViaag~~   80 (294)
T 1oju_A           68 KGSEIIVVTAGLA   80 (294)
T ss_dssp             TTCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            3689999999963

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.19  E-value=0.057  Score=47.42  Aligned_cols=80  Identities=25%  Similarity=0.250  Sum_probs=55.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      |.+.+.+++.|+|+ |.+|.+++..|+..|.  +|++.|+++++++....++....   +..+.+.. |  +.       
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-------   69 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-------   69 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-------
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-------
Confidence            66666678999999 9999999999999885  79999999875554444444322   11233332 1  21       


Q ss_pred             HHHHhhcCCccEEEEccccC
Q 039097           76 DFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~   95 (290)
                          +.+...|++|..+|..
T Consensus        70 ----~al~~aDvViia~~~~   85 (316)
T 1ldn_A           70 ----DDCRDADLVVICAGAN   85 (316)
T ss_dssp             ----GGTTTCSEEEECCSCC
T ss_pred             ----HHhCCCCEEEEcCCCC
Confidence                1234689999999874

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=96.19  E-value=0.046  Score=48.13  Aligned_cols=74  Identities=18%  Similarity=0.160  Sum_probs=52.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++.|+|+ |.+|.+++..|+..+.  .|++.|+++++++....++....  ...+.+.. |  +.           +.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~-----------~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EY-----------SDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CG-----------GGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CH-----------HHh
Confidence            58999999 9999999999999986  89999999887776555554431  12232222 2  11           123


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..+|..
T Consensus        71 ~~aDvVii~ag~~   83 (318)
T 1ez4_A           71 KDADLVVITAGAP   83 (318)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999863

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.15  E-value=0.036  Score=48.59  Aligned_cols=75  Identities=19%  Similarity=0.082  Sum_probs=50.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++.|+|+ |.+|..++..|+..|+ .|++.++++++++....++...   ......+...  +|.+           .+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~   68 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA-----------DT   68 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHH-----------HH
Confidence            57899998 9999999999999997 8999999988776555555431   1111111110  1211           12


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ...|++|..+|.-
T Consensus        69 ~~aD~Vi~a~g~p   81 (309)
T 1ur5_A           69 ANSDVIVVTSGAP   81 (309)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCCEEEEcCCCC
Confidence            3689999999863

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.14  E-value=0.047  Score=49.23  Aligned_cols=83  Identities=16%  Similarity=0.141  Sum_probs=55.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeC-----------CCHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV-----------ADPAAIH   72 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-----------~~~~~v~   72 (290)
                      ..+++++|.|+ |.+|..+++.+...|++|++.+|++.+++.+.+ +   +   ..++..|+           ...+...
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-l---G---a~~~~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-V---G---AQWLDLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-T---T---CEECCCC-------------CHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---C---CeEEeccccccccccchhhhhHHHHh
Confidence            35789999998 799999999999999999999999887665443 2   1   22222221           0111122


Q ss_pred             HHHHHHHhhcCCccEEEEcccc
Q 039097           73 SVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        73 ~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      .-.+.+.+.....|++|.++.+
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCC
T ss_pred             hhHHHHHHHHhcCCEEEECCCC
Confidence            2334444455689999988754

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.10  E-value=0.0077  Score=52.91  Aligned_cols=39  Identities=28%  Similarity=0.214  Sum_probs=35.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      .+||+||+|++|...++.+...|++|+++++++++.+.+
T Consensus       149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            399999999999999999999999999999998876554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.08  E-value=0.0081  Score=51.94  Aligned_cols=38  Identities=18%  Similarity=0.219  Sum_probs=35.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      +++||+++|.|.++-+|+.+|..|+.+|+.|.++.|+.
T Consensus       157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            57899999999999999999999999999999998764

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.05  E-value=0.055  Score=47.82  Aligned_cols=76  Identities=13%  Similarity=0.120  Sum_probs=53.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +..++.|+|+ |.+|.+++..|+..+.  .|++.|+++++++....++....  ...+.+.. |  +.+           
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~-----------   72 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS-----------   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH-----------
Confidence            3458999999 9999999999999886  79999999887776555554421  12233322 2  211           


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                      .+..-|++|..+|..
T Consensus        73 a~~~aDvVii~ag~~   87 (326)
T 2zqz_A           73 DAKDADLVVITAGAP   87 (326)
T ss_dssp             GGGGCSEEEECCCCC
T ss_pred             HhCCCCEEEEcCCCC
Confidence            123689999999863

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.00  E-value=0.0086  Score=55.64  Aligned_cols=74  Identities=16%  Similarity=0.193  Sum_probs=56.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      .+++|.|+ |.+|+.+|+.|.++|+.|++.+++++.++...+++      .+..+..|.++++-++++=      ..+-|
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Ag------i~~ad   70 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAG------AQDAD   70 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHT------TTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcC------CCcCC
Confidence            46777776 68999999999999999999999988776655544      3678889999988766651      12567


Q ss_pred             EEEEccc
Q 039097           87 ILVNNAG   93 (290)
Q Consensus        87 ~li~~Ag   93 (290)
                      ++|...+
T Consensus        71 ~~ia~t~   77 (461)
T 4g65_A           71 MLVAVTN   77 (461)
T ss_dssp             EEEECCS
T ss_pred             EEEEEcC
Confidence            7776543

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.98  E-value=0.029  Score=51.34  Aligned_cols=72  Identities=11%  Similarity=0.042  Sum_probs=54.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +-+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....   .+.      -..+..|..|.+.+.++++     
T Consensus        31 ~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~a------d~~~~~~~~d~~~l~~~a~-----   95 (419)
T 4e4t_A           31 PILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG---AVA------DRHLRAAYDDEAALAELAG-----   95 (419)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH---HHS------SEEECCCTTCHHHHHHHHH-----
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh---hhC------CEEEECCcCCHHHHHHHHh-----
Confidence            3567999999986 479999999999999999999877654321   121      1345688899998888884     


Q ss_pred             cCCccEEEE
Q 039097           82 FGKLDILVN   90 (290)
Q Consensus        82 ~~~id~li~   90 (290)
                        ++|+++.
T Consensus        96 --~~D~V~~  102 (419)
T 4e4t_A           96 --LCEAVST  102 (419)
T ss_dssp             --HCSEEEE
T ss_pred             --cCCEEEE
Confidence              4788884

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.96  E-value=0.054  Score=47.30  Aligned_cols=72  Identities=21%  Similarity=0.270  Sum_probs=47.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++.|.|+ |.+|..++..|+..|+  +|++.++++++++....++.....  ....+..   .+.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHH-----------HhC
Confidence            6889998 9999999999999998  999999998766544444432210  1122211   1211           124


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ..|++|..++.
T Consensus        67 ~aDvVIi~~~~   77 (304)
T 2v6b_A           67 DAQVVILTAGA   77 (304)
T ss_dssp             TCSEEEECC--
T ss_pred             CCCEEEEcCCC
Confidence            68999999985

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.92  E-value=0.0063  Score=53.89  Aligned_cols=72  Identities=14%  Similarity=0.165  Sum_probs=55.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .++++|.|+ |.+|+.+++.|.++|+ |++.+++++..+ .. +      ..+.++.+|.++++.++++      ...+.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~-~------~~~~~i~gd~~~~~~L~~a------~i~~a  178 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL-R------SGANFVHGDPTRVSDLEKA------NVRGA  178 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH-H------TTCEEEESCTTSHHHHHHT------CSTTE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH-h------CCcEEEEeCCCCHHHHHhc------Chhhc
Confidence            357999996 8999999999999999 999999987765 32 2      2478899999999887654      12367


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |.+|...+
T Consensus       179 ~~vi~~~~  186 (336)
T 1lnq_A          179 RAVIVDLE  186 (336)
T ss_dssp             EEEEECCS
T ss_pred             cEEEEcCC
Confidence            88887654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.89  E-value=0.0057  Score=53.89  Aligned_cols=83  Identities=12%  Similarity=0.088  Sum_probs=56.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|++++|.|++.-+|+.+|+.|+..|+.|.+++|+..+..+..+++..   .......+..++++++.+.+.+     
T Consensus       174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~---~~~~~t~~~~t~~~~L~e~l~~-----  245 (320)
T 1edz_A          174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL---NKHHVEDLGEYSEDLLKKCSLD-----  245 (320)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC---CCCEEEEEEECCHHHHHHHHHH-----
T ss_pred             CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh---hcccccccccccHhHHHHHhcc-----
Confidence            67899999999999999999999999999999999884432221111110   0011111222445677777764     


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                        -|+||...|.-
T Consensus       246 --ADIVIsAtg~p  256 (320)
T 1edz_A          246 --SDVVITGVPSE  256 (320)
T ss_dssp             --CSEEEECCCCT
T ss_pred             --CCEEEECCCCC
Confidence              69999999863

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.88  E-value=0.012  Score=50.75  Aligned_cols=41  Identities=12%  Similarity=0.131  Sum_probs=35.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV   47 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~   47 (290)
                      +++.|.|++|.+|.++++.|++.|++|++.+|++++.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999977665543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.87  E-value=0.085  Score=46.33  Aligned_cols=74  Identities=15%  Similarity=0.096  Sum_probs=50.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+|+ |.+|.++|..|+..|.  .|++.++++++++....++.+.   ......+...|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            5788996 9999999999999987  8999999998776544444432   111222222221  1           123


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||..
T Consensus        68 ~~aDvVii~ag~~   80 (314)
T 3nep_X           68 EDSDVCIITAGLP   80 (314)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999963

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.78  E-value=0.019  Score=49.35  Aligned_cols=37  Identities=5%  Similarity=0.014  Sum_probs=34.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      +.||+++|.|+++-+|+.+|..|+..|+.|.++.++.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            6899999999999999999999999999999987753

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=95.78  E-value=0.013  Score=51.69  Aligned_cols=49  Identities=20%  Similarity=0.199  Sum_probs=37.1

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      |....-++|.|.|+ |-+|+.+|..|+..|++|++.+++++.++...+.+
T Consensus         1 Ma~p~~~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i   49 (319)
T 3ado_A            1 MASPAAGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENI   49 (319)
T ss_dssp             ------CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCCCCCeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence            66666677888877 88999999999999999999999988777655554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.77  E-value=0.014  Score=50.88  Aligned_cols=72  Identities=17%  Similarity=0.178  Sum_probs=51.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.+++++|.|+ |.||+++|+.|...|++|++.+|++++.+...    ..+   +..+  +   ..++.+++       
T Consensus       154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g---~~~~--~---~~~l~~~l-------  213 (300)
T 2rir_A          154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMG---LVPF--H---TDELKEHV-------  213 (300)
T ss_dssp             CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTT---CEEE--E---GGGHHHHS-------
T ss_pred             CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCC---CeEE--c---hhhHHHHh-------
Confidence            578999999996 89999999999999999999999976543322    111   2222  1   12333332       


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      ...|+||+....
T Consensus       214 ~~aDvVi~~~p~  225 (300)
T 2rir_A          214 KDIDICINTIPS  225 (300)
T ss_dssp             TTCSEEEECCSS
T ss_pred             hCCCEEEECCCh
Confidence            368999998874

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.77  E-value=0.1  Score=45.37  Aligned_cols=74  Identities=19%  Similarity=0.051  Sum_probs=49.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+|+ |+||..+|..|+.++.  ++++.|.++++.+-...++.+.   .+....+...+  |.+           .+
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------GG
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------Hh
Confidence            4778895 9999999999999885  7999999987766555555432   11222223221  221           12


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||.-
T Consensus        68 ~~aDvVvitAG~p   80 (294)
T 2x0j_A           68 KGSEIIVVTAGLA   80 (294)
T ss_dssp             TTCSEEEECCCCC
T ss_pred             CCCCEEEEecCCC
Confidence            3689999999964

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.76  E-value=0.031  Score=49.40  Aligned_cols=78  Identities=14%  Similarity=0.121  Sum_probs=48.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+++|.|+ |++|...++.+... |++|+++++++++.+.+.    ..+..    ...|-++.+..+++.+.. . -.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~----~~i~~~~~~~~~~v~~~t-~-g~  231 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGAD----VTINSGDVNPVDEIKKIT-G-GL  231 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCS----EEEEC-CCCHHHHHHHHT-T-SS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCe----EEEeCCCCCHHHHhhhhc-C-CC
Confidence            4789999987 77777777777765 789999999987644322    22322    234555554443333321 1 12


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      .+|.++.+++
T Consensus       232 g~d~~~~~~~  241 (348)
T 4eez_A          232 GVQSAIVCAV  241 (348)
T ss_dssp             CEEEEEECCS
T ss_pred             CceEEEEecc
Confidence            5888888887

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.76  E-value=0.049  Score=49.51  Aligned_cols=43  Identities=14%  Similarity=0.089  Sum_probs=37.2

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV   47 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~   47 (290)
                      ..+.+|+|.|+ |.+|..+++.+...|++|++.++++.+.+...
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            35679999999 79999999999999999999999988765543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.75  E-value=0.17  Score=47.68  Aligned_cols=145  Identities=13%  Similarity=0.035  Sum_probs=88.3

Q ss_pred             CCCcEEEEecCCC-chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHH-HHhh
Q 039097            4 TAKRYAVVTGANK-GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADF-IRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~-gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~   81 (290)
                      ..|.+.++....+ +++.+++..|.++|..|+.+......                        +.+.+.+.+++ +...
T Consensus        48 ~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~~------------------------~~~~~~~~l~~~~~~~  103 (525)
T 3qp9_A           48 LSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPLG------------------------DRQRLAATLGEALAAA  103 (525)
T ss_dssp             CCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTTC------------------------CHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCCC------------------------CHHHHHHHHHhhhhcc
Confidence            3466777765543 38899999999999988776543221                        45555555552 2245


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhh-cccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ-TNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .+.++.|+|..+.-......                       ...+. ..+.+.+.+++++...   ....++..++..
T Consensus       104 ~~~~~~v~~l~~~~~~~~~~-----------------------~~~~~~~g~~~~l~l~qal~~~---~~~~~l~~vT~g  157 (525)
T 3qp9_A          104 GGAVDGVLSLLAWDESAHPG-----------------------HPAPFTRGTGATLTLVQALEDA---GVAAPLWCVTHG  157 (525)
T ss_dssp             TSCCSEEEECGGGCCCBCTT-----------------------SCTTCBHHHHHHHHHHHHHHHT---TCCSCEEEEEES
T ss_pred             cCCCCeEEEcccCCCCcccc-----------------------ccccccchHHHHHHHHHHHHhc---CCCCcEEEEECC
Confidence            56789999988764211100                       01111 3456677788887542   223566666654


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ......                                            ....-...++++.+|.|+++.|+|++.+..
T Consensus       158 a~~~~~--------------------------------------------~~~~~~p~~a~l~Gl~r~~~~E~p~~~~~~  193 (525)
T 3qp9_A          158 AVSVGR--------------------------------------------ADHVTSPAQAMVWGMGRVAALEHPERWGGL  193 (525)
T ss_dssp             CCCCBT--------------------------------------------TBCCSCHHHHHHHHHHHHHHHHSTTTEEEE
T ss_pred             CEeCCC--------------------------------------------CCCCCCHHHHHHHHHHHHHHHhCCCceEEE
Confidence            322211                                            011224568899999999999999887765


Q ss_pred             ee
Q 039097          241 VC  242 (290)
Q Consensus       241 v~  242 (290)
                      |.
T Consensus       194 vD  195 (525)
T 3qp9_A          194 ID  195 (525)
T ss_dssp             EE
T ss_pred             EE
Confidence            55

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.73  E-value=0.077  Score=45.62  Aligned_cols=78  Identities=14%  Similarity=0.168  Sum_probs=57.5

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC-CCeEEE-EecCcc---------------------cHHHHHHHHHhcCCCcEEEEE
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALN-GIITVL-TARDEK---------------------GGLEAVEKLKHSGFDNVIFHQ   62 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~-~~r~~~---------------------~~~~~~~~l~~~~~~~~~~~~   62 (290)
                      .-++.|.|++|.+|+.+++.+.+. ++.++. ++|+..                     ++++..++     .+    +.
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~-----~D----VV   77 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE-----AD----YL   77 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH-----CS----EE
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC-----CC----EE
Confidence            357999999999999999999876 567665 466532                     22222221     12    56


Q ss_pred             eeCCCHHHHHHHHHHHHhhcCCccEEEEcccc
Q 039097           63 LDVADPAAIHSVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        63 ~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      +|++.++...+.+..+.+.  ++++||-+.|+
T Consensus        78 IDfT~p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           78 IDFTLPEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             EECSCHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             EEcCCHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            8999999988888888776  78899988885

>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}

Probab=95.68  E-value=0.003  Score=57.70  Aligned_cols=35  Identities=20%  Similarity=0.213  Sum_probs=32.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEE-EEec
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITV-LTAR   38 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi-~~~r   38 (290)
                      +++||+++|+| .|.+|..+|+.|.+.|++|+ +.++
T Consensus       215 ~l~gk~vaVqG-~GnVG~~~a~~L~~~GakVVavsD~  250 (419)
T 3aoe_E          215 DLRGARVVVQG-LGQVGAAVALHAERLGMRVVAVATS  250 (419)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CccCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEEcC
Confidence            57899999998 89999999999999999998 7777

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.66  E-value=0.019  Score=49.66  Aligned_cols=38  Identities=29%  Similarity=0.294  Sum_probs=34.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      ++.||+++|.|.++-+|+.+|..|+..|+.|.++.++.
T Consensus       158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            57899999999999999999999999999999987654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=95.65  E-value=0.098  Score=46.06  Aligned_cols=74  Identities=15%  Similarity=0.141  Sum_probs=50.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++.|.|+ |.+|..++..|+..|+ .|++.|+++++++.....+...   ......+...  +|.+           .+
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~~-----------al   70 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTYD-----------DL   70 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCHH-----------Hh
Confidence            47888998 9999999999999998 8999999988777554444331   1111111110  1211           12


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      ...|++|..+|.
T Consensus        71 ~~aD~Vi~a~g~   82 (322)
T 1t2d_A           71 AGADVVIVTAGF   82 (322)
T ss_dssp             TTCSEEEECCSC
T ss_pred             CCCCEEEEeCCC
Confidence            368999999985

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.62  E-value=0.026  Score=53.74  Aligned_cols=61  Identities=18%  Similarity=0.116  Sum_probs=45.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC-------------------cccHHHHHHHHHhcCCC-cEEEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD-------------------EKGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~-------------------~~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      +++++|+|.|+ ||+|.++|+.|+..|. ++.++|.+                   ..+++.+.+.++...+. ++..+.
T Consensus       325 L~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~  403 (598)
T 3vh1_A          325 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  403 (598)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEe
Confidence            45778888875 6899999999999998 78888654                   25677777777765543 455565


Q ss_pred             eeC
Q 039097           63 LDV   65 (290)
Q Consensus        63 ~Dl   65 (290)
                      .++
T Consensus       404 ~~I  406 (598)
T 3vh1_A          404 LSI  406 (598)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            554

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.58  E-value=0.007  Score=52.21  Aligned_cols=43  Identities=23%  Similarity=0.322  Sum_probs=36.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      ++++++++|.|+ |++|++++..|.+.|++|++.+|++++.++.
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l  168 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKL  168 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHH
Confidence            467899999996 7999999999999999999999997665543

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.55  E-value=0.071  Score=47.02  Aligned_cols=79  Identities=11%  Similarity=0.193  Sum_probs=50.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeE-EEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIIT-VLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~V-i~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ..|++++|+|+ |++|...++.+...|+.+ +++++++++.+. .+++   +..    ...|..+.+ ..+..+.+. ..
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~-a~~l---Ga~----~~i~~~~~~-~~~~~~~~~-~~  227 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL-AKSF---GAM----QTFNSSEMS-APQMQSVLR-EL  227 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH-HHHT---TCS----EEEETTTSC-HHHHHHHHG-GG
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH-HHHc---CCe----EEEeCCCCC-HHHHHHhhc-cc
Confidence            35789999987 899999999999999865 566777665433 2222   322    223444433 223333332 33


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      +..|+++.++|
T Consensus       228 ~g~d~v~d~~G  238 (346)
T 4a2c_A          228 RFNQLILETAG  238 (346)
T ss_dssp             CSSEEEEECSC
T ss_pred             CCccccccccc
Confidence            57899999988

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.54  E-value=0.2  Score=43.85  Aligned_cols=76  Identities=20%  Similarity=0.162  Sum_probs=48.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-C--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-G--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++.|+||+|.+|.+++..|+.+ +  ..+++.++++ +.+....++.... ....+...--++.   .+.+       ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~-~~~~v~~~~~~~~---~~~~-------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIP-TAVKIKGFSGEDA---TPAL-------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSC-SSEEEEEECSSCC---HHHH-------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCC-CCceEEEecCCCc---HHHh-------CC
Confidence            5889999999999999999886 5  4799999987 4444444554432 1222221100111   1122       36


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|++|..||..
T Consensus        70 aDivii~ag~~   80 (312)
T 3hhp_A           70 ADVVLISAGVA   80 (312)
T ss_dssp             CSEEEECCSCS
T ss_pred             CCEEEEeCCCC
Confidence            89999999963

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.53  E-value=0.061  Score=46.72  Aligned_cols=80  Identities=13%  Similarity=0.128  Sum_probs=51.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .+++.|.||.|.||.++|+.|.+.|++|++.+|++....  .+.+.   ...+.++.+-.   ..+.++++++.....+=
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~--~~~~~---~aDvVilavp~---~~~~~vl~~l~~~l~~~   92 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA--ESILA---NADVVIVSVPI---NLTLETIERLKPYLTEN   92 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH--HHHHT---TCSEEEECSCG---GGHHHHHHHHGGGCCTT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCH--HHHhc---CCCEEEEeCCH---HHHHHHHHHHHhhcCCC
Confidence            457889999999999999999999999999999875311  11111   12344444422   23677777765543322


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      -+|+..++
T Consensus        93 ~iv~~~~s  100 (298)
T 2pv7_A           93 MLLADLTS  100 (298)
T ss_dssp             SEEEECCS
T ss_pred             cEEEECCC
Confidence            24555544

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.51  E-value=0.058  Score=46.45  Aligned_cols=86  Identities=16%  Similarity=0.085  Sum_probs=55.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC------CcEEEEEeeCCCHHHHHHHH---HH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF------DNVIFHQLDVADPAAIHSVA---DF   77 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~v~~~~---~~   77 (290)
                      +++.|.| .|.+|.++++.|++.|++|++.+|++++.+...+.-.....      ....++..=+.+...+++++   ++
T Consensus         2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            4577776 58999999999999999999999998887765432000000      01233334445566777777   66


Q ss_pred             HHhhcCCccEEEEccc
Q 039097           78 IRSHFGKLDILVNNAG   93 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag   93 (290)
                      +.....+=.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6554444456666644

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=95.51  E-value=0.029  Score=51.56  Aligned_cols=78  Identities=26%  Similarity=0.280  Sum_probs=51.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCC-CcEEEEEe
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGF-DNVIFHQL   63 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~-~~~~~~~~   63 (290)
                      ++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+.                   .+++.+.+.+....+ -++..+..
T Consensus        39 ~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~  117 (434)
T 1tt5_B           39 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  117 (434)
T ss_dssp             HTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEES
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEec
Confidence            5678899886 8899999999999998 788886432                   355556666665443 24666666


Q ss_pred             eCCCHHHHHHHHHHHHhhcCCccEEEEcc
Q 039097           64 DVADPAAIHSVADFIRSHFGKLDILVNNA   92 (290)
Q Consensus        64 Dl~~~~~v~~~~~~~~~~~~~id~li~~A   92 (290)
                      ++.+..  .+++       ...|+||.+.
T Consensus       118 ~i~~~~--~~~~-------~~~DlVi~~~  137 (434)
T 1tt5_B          118 KIQDFN--DTFY-------RQFHIIVCGL  137 (434)
T ss_dssp             CGGGBC--HHHH-------TTCSEEEECC
T ss_pred             ccchhh--HHHh-------cCCCEEEECC
Confidence            655432  1222       2567777764

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=95.49  E-value=0.13  Score=44.65  Aligned_cols=39  Identities=21%  Similarity=0.203  Sum_probs=34.3

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      +++.|.|+ |.+|.++|..|++.|++|++.+|+++.++..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            56888887 8999999999999999999999998876654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.48  E-value=0.02  Score=49.50  Aligned_cols=38  Identities=29%  Similarity=0.267  Sum_probs=34.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      ++.||+++|.|.++-+|+.+|..|+.+|+.|.++.|+.
T Consensus       158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            57899999999999999999999999999999987653

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=95.47  E-value=0.073  Score=46.55  Aligned_cols=37  Identities=8%  Similarity=-0.051  Sum_probs=29.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      +++.+++.|.| .|.+|.++|+.|++.|+ .|++.+|++
T Consensus        21 ~~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           21 QSNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             cCCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            34446777776 59999999999999999 999999974

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.45  E-value=0.078  Score=43.49  Aligned_cols=75  Identities=9%  Similarity=0.179  Sum_probs=50.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++++++.|.| .|.+|.++|..|++.|++|++.+|+++          ......+.++.+  . ...++++++++.....
T Consensus        17 ~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~----------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~~   82 (209)
T 2raf_A           17 FQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ----------ATTLGEIVIMAV--P-YPALAALAKQYATQLK   82 (209)
T ss_dssp             ---CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC----------CSSCCSEEEECS--C-HHHHHHHHHHTHHHHT
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH----------HhccCCEEEEcC--C-cHHHHHHHHHHHHhcC
Confidence            5567899998 799999999999999999999999876          111123444333  2 6677788887765444


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                       =.++|+.+.
T Consensus        83 -~~~vi~~~~   91 (209)
T 2raf_A           83 -GKIVVDITN   91 (209)
T ss_dssp             -TSEEEECCC
T ss_pred             -CCEEEEECC
Confidence             235555544

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.43  E-value=0.024  Score=49.38  Aligned_cols=38  Identities=24%  Similarity=0.243  Sum_probs=35.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      ++.||+++|.|.++-+|+.+|..|+..|+.|.++.|+.
T Consensus       162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            57899999999999999999999999999999998754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.42  E-value=0.039  Score=48.45  Aligned_cols=87  Identities=11%  Similarity=0.098  Sum_probs=54.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH-------HHhcCCCcEEEEEeeCCCHHHHHHHHH-
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK-------LKHSGFDNVIFHQLDVADPAAIHSVAD-   76 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~Dl~~~~~v~~~~~-   76 (290)
                      +.+++.|.| .|.+|..+|+.|++.|++|++.+|++++.++..+.       +.+.. ....++..=+.+...+++++. 
T Consensus        30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~-~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAA-RDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHH-TTCSEEEECCSSHHHHHHHHTT
T ss_pred             CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHH-hcCCEEEEECCCHHHHHHHHcc
Confidence            345777775 59999999999999999999999998776654322       00000 112333344455666777665 


Q ss_pred             -HHHhhcCCccEEEEccc
Q 039097           77 -FIRSHFGKLDILVNNAG   93 (290)
Q Consensus        77 -~~~~~~~~id~li~~Ag   93 (290)
                       .+.....+=.++|+...
T Consensus       108 ~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             hhHHhhCCCCCEEEecCC
Confidence             45544444455665544

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=95.40  E-value=0.11  Score=45.55  Aligned_cols=74  Identities=20%  Similarity=0.187  Sum_probs=50.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++.|+|+ |.+|..++..|+..|. .|++.|+++++++....++...   ......+...  .|.+           .+.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~   66 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE-----------DMR   66 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----------GGT
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH-----------HhC
Confidence            4778998 9999999999999888 6999999988776655555432   1112222221  1211           124


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ..|++|..+|..
T Consensus        67 ~aD~Vi~~ag~~   78 (308)
T 2d4a_B           67 GSDIVLVTAGIG   78 (308)
T ss_dssp             TCSEEEECCSCC
T ss_pred             CCCEEEEeCCCC
Confidence            689999999963

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=95.36  E-value=0.032  Score=53.67  Aligned_cols=63  Identities=25%  Similarity=0.287  Sum_probs=44.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc-------------------ccHHHHHHHHHhcCCC-cEEEEE
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE-------------------KGGLEAVEKLKHSGFD-NVIFHQ   62 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~-------------------~~~~~~~~~l~~~~~~-~~~~~~   62 (290)
                      +++.+|+|.|+ ||+|..+++.|+..|. ++.++|.+.                   .+.+.+.+.+....+. ++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            45678999887 8999999999999998 788887543                   3344555556554432 455565


Q ss_pred             eeCCC
Q 039097           63 LDVAD   67 (290)
Q Consensus        63 ~Dl~~   67 (290)
                      .+++.
T Consensus        94 ~~i~~   98 (640)
T 1y8q_B           94 DSIMN   98 (640)
T ss_dssp             SCTTS
T ss_pred             cccch
Confidence            55543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.35  E-value=0.14  Score=44.84  Aligned_cols=74  Identities=22%  Similarity=0.170  Sum_probs=51.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++.|+|+ |.+|.+++..|+.++  ..|++.|+++++++....++.+..  ...+.+.. |  +.+    .       +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~----a-------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG----D-------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG----G-------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH----H-------h
Confidence            36889998 999999999999987  489999999877776555554421  11223222 2  222    1       3


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..+|..
T Consensus        66 ~~aD~Vii~ag~~   78 (310)
T 2xxj_A           66 EGARAVVLAAGVA   78 (310)
T ss_dssp             TTEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999863

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.35  E-value=0.022  Score=48.63  Aligned_cols=69  Identities=22%  Similarity=0.222  Sum_probs=50.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++ +++|.|+ |++|+++++.|.+.|++|++.+|+.++.++..+++.      ..     +.+.+   ++        
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~------~~-----~~~~~---~~--------  169 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG------LR-----AVPLE---KA--------  169 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT------CE-----ECCGG---GG--------
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc------cc-----hhhHh---hc--------
Confidence            4678 8999996 779999999999999999999999877666555442      11     11221   11        


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ...|+||++....
T Consensus       170 ~~~Divi~~tp~~  182 (263)
T 2d5c_A          170 REARLLVNATRVG  182 (263)
T ss_dssp             GGCSEEEECSSTT
T ss_pred             cCCCEEEEccCCC
Confidence            2589999998864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	290
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	1e-56
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	4e-41
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-36
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-35
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-33
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	3e-33
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-30
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	8e-30
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-29
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	3e-29
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-28
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-28
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-28
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-28
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	8e-28
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-27
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-27
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-27
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	3e-26
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-26
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	4e-26
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	7e-26
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-25
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-25
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-25
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-24
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-24
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-24
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	7e-24
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-23
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	2e-23
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-23
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	3e-23
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-22
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-22
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-22
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-21
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	0.003
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-21
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	6e-21
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-20
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-20
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	0.002
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-20
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-20
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-20
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	9e-20
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-19
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-19
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-17
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	5e-17
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	7e-05
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	5e-16
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-16
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-06
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	7e-15
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-14
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	9e-14
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-13
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	7e-13
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	8e-13
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	2e-12
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	7e-12
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-11
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	3e-11
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	6e-08
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-07
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-06
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	9e-06
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	4e-05
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	6e-05
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	8e-05
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	8e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	2e-04
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-04
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	4e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	5e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	6e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.003
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.004
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	0.004

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  181 bits (461), Expect = 1e-56
 Identities = 101/293 (34%), Positives = 154/293 (52%), Gaps = 30/293 (10%)

Query: 4   TAKRYAVVTGANKGIGYEVVRQLA-LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           +    A+VTG NKGIG  +VR L  L     VLTARD   G  AV++L+  G  +  FHQ
Sbjct: 1   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQ 59

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
           LD+ D  +I ++ DF+R  +G LD+LVNNAGI    +D                    + 
Sbjct: 60  LDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTP----------------FHI 103

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
            AE  ++TN+ G + +C  L+PL++     R+VNVSS +      +          +E +
Sbjct: 104 QAEVTMKTNFFGTRDVCTELLPLIK--PQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 161

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK------KYPNF 236
           TEE +  ++++++ D K+G  + +GWP  ++AY ++K  +   +RI A+      K    
Sbjct: 162 TEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKI 219

Query: 237 CINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALL--HKGGPSGLFFSRKEE 287
            +N  CPG+V+T+M       + EEGAE+PV+LALL     GP G F S K  
Sbjct: 220 LLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRV 272

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  140 bits (354), Expect = 4e-41
 Identities = 60/291 (20%), Positives = 95/291 (32%), Gaps = 50/291 (17%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           +    VVTGAN+GIG  +V+QL  +      + TARD     E   +LK      V    
Sbjct: 2   SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV----EKATELKSIKDSRVHVLP 57

Query: 63  LDVADPAAIHSVADFIRSHFGK--LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           L V    ++ +    +    G   L +L+NNAG+                          
Sbjct: 58  LTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTN---------------TEPN 102

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
                + L  N      + + L+PLL+ + S    +  S     +               
Sbjct: 103 RAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSG--------- 153

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                   +        AY +SKAA+N + R LA    +  +  
Sbjct: 154 ----------------LGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLV 197

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL 289
              CPG+V+T +      LTVE+     +          +G FF R  +  
Sbjct: 198 VNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY 248

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (325), Expect = 1e-36
 Identities = 55/292 (18%), Positives = 95/292 (32%), Gaps = 79/292 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVI 59
           M     R A+VTGA+ GIG  V R L   G+  V  AR      E   + K +G+   +I
Sbjct: 5   MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI 64

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
            ++ D+++   I S+   IRS    +DI +NNAG+    +                    
Sbjct: 65  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLS----------------G 108

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLL--QLSDSARIVNVSSSLGKLMYVTHEWAKGVFS 177
           +    +     N L            +  +  D   I+N++S  G  +            
Sbjct: 109 STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL----------- 157

Query: 178 DAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY---- 233
                                           +    Y  +K A+ A T  L ++     
Sbjct: 158 ------------------------------PLSVTHFYSATKYAVTALTEGLRQELREAQ 187

Query: 234 PNFCINCVCPGYVKTEMT--------------YNAGRL-TVEEGAESPVWLA 270
            +    C+ PG V+T+                Y   +    E+ AE+ +++ 
Sbjct: 188 THIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVL 239

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  125 bits (315), Expect = 4e-35
 Identities = 59/279 (21%), Positives = 93/279 (33%), Gaps = 60/279 (21%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLD 64
           + A++TG++ GIG       A  G    +T R  +   E  +++  +G    NV     D
Sbjct: 6   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 65

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V   A    +       FGKLDILVNNAG     S + T               Q+ ES 
Sbjct: 66  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTG------------TAQSIESY 113

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +  L  N      + +  +P L  +    +   S + G                      
Sbjct: 114 DATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASG---------------------- 151

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                     +   Y ++KAA++ YTR  A       I  N + 
Sbjct: 152 ---------------------LHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSIS 190

Query: 243 PGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLF 281
           PG V T      G +  E   +    +A + +  P+G+ 
Sbjct: 191 PGLVATGFGSAMG-MPEETSKKFYSTMATMKECVPAGVM 228

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  120 bits (302), Expect = 2e-33
 Identities = 53/265 (20%), Positives = 76/265 (28%), Gaps = 68/265 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG  +GIG  + +  A  G +  L     +G  E  E +         F Q+D+ D 
Sbjct: 8   VLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI------GGAFFQVDLEDE 60

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                  +      G++D+LVNNA I    S                          + L
Sbjct: 61  RERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTV----------------RLPEWRRVL 104

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           + N      +       ++      IVNV+S  G                          
Sbjct: 105 EVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF------------------------ 140

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                                   AAY  SK  +   TR LA       I  N V PG +
Sbjct: 141 -------------------AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAI 181

Query: 247 KTEMTYNAGRLTVEEGAESPVWLAL 271
            TE    A  L+ +       W  L
Sbjct: 182 ATEAVLEAIALSPDPERTRRDWEDL 206

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (300), Expect = 3e-33
 Identities = 56/268 (20%), Positives = 84/268 (31%), Gaps = 70/268 (26%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
              ++TGA  GIG     + A      VL   ++ G  E   K K  G   V    +D +
Sbjct: 8   EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCS 66

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +   I+S A  +++  G + ILVNNAG+   S    T                     EK
Sbjct: 67  NREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFAT----------------QDPQIEK 110

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N L      +A +P +  ++   IV V+S+ G +                      
Sbjct: 111 TFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHV---------------------- 148

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK-----KYPNFCINCV 241
                           P          AY  SK A   + + L       +       C+
Sbjct: 149 --------------SVP-------FLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 187

Query: 242 CPGYVKTEMTYNAGR-----LTVEEGAE 264
           CP +V T    N        L  EE   
Sbjct: 188 CPNFVNTGFIKNPSTSLGPTLEPEEVVN 215

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  112 bits (282), Expect = 2e-30
 Identities = 57/283 (20%), Positives = 93/283 (32%), Gaps = 81/283 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AV+TG   GIG  +  + A+ G    +            E    +    V+  + DV+
Sbjct: 6   KLAVITGGANGIGRAIAERFAVEGADIAIADLVPA---PEAEAAIRNLGRRVLTVKCDVS 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
            P  + +    + S FG+ DILVNNAGI  +    +                 T+E  +K
Sbjct: 63  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDEL----------------TFEQWKK 106

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
             + N      M +A +P ++ +   RI+N++S+   L                      
Sbjct: 107 TFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWL---------------------- 144

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                       YI +KAA   +TR LA       I  N + P 
Sbjct: 145 ---------------------KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 183

Query: 245 YVKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
            V+T  T  +                 RL    +   +  +LA
Sbjct: 184 LVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLA 226

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  111 bits (278), Expect = 8e-30
 Identities = 56/261 (21%), Positives = 87/261 (33%), Gaps = 65/261 (24%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TG  +G+G E  RQ    G   VL    ++ G     +L     D   +  LDV 
Sbjct: 6   KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG----DAARYQHLDVT 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
                  V  + R  FG +D LVNNAGI+                      T++ E   K
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGIST----------------GMFLETESVERFRK 105

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++ N  G     + +IP ++ +    IVN+SS+ G                        
Sbjct: 106 VVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG------------------------ 141

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                  A  ++Y  SK  +   +++ A +     I  N V PG
Sbjct: 142 -------------------LMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182

Query: 245 YVKTEMTYNAGRLTVEEGAES 265
              T MT   G    E    +
Sbjct: 183 MTYTPMTAETGIRQGEGNYPN 203

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  110 bits (275), Expect = 2e-29
 Identities = 52/279 (18%), Positives = 86/279 (30%), Gaps = 68/279 (24%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +VTG N+GIG    R +A  G    +  R     +E  EK+          +Q DV++ 
Sbjct: 12  IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNT 71

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             +      I +  G +  L+ NAG++ +    +                 T+E      
Sbjct: 72  DIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL----------------THEDFAFVY 115

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G    C A+  L         + V+SS+   +                       
Sbjct: 116 DVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQI----------------------- 152

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                        +  +         Y  SKAA +   + LA ++ +  I  N + PGYV
Sbjct: 153 ------------INQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYV 200

Query: 247 KTEMTYN--------------AGRL-TVEEGAESPVWLA 270
            T+ T +                R    EE     + L 
Sbjct: 201 NTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLL 239

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  109 bits (274), Expect = 3e-29
 Identities = 43/251 (17%), Positives = 68/251 (27%), Gaps = 73/251 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +   A  GIG +  R+L    +   +     +      E    +   N+ FH  DV 
Sbjct: 6   KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVT 65

Query: 67  DP-AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            P A    +   I      +DIL+N AGI                              E
Sbjct: 66  VPVAESKKLLKKIFDQLKTVDILINGAGI------------------------LDDHQIE 101

Query: 126 KCLQTNYLGAKRMCEALIPLLQLS---DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
           + +  N+ G      A++             I N+ S  G                    
Sbjct: 102 RTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF------------------- 142

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NC 240
                                           Y  SKAA+ ++T  LAK  P   +    
Sbjct: 143 -----------------------NAIH-QVPVYSASKAAVVSFTNSLAKLAPITGVTAYS 178

Query: 241 VCPGYVKTEMT 251
           + PG  +T + 
Sbjct: 179 INPGITRTPLV 189

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  108 bits (271), Expect = 1e-28
 Identities = 58/277 (20%), Positives = 89/277 (32%), Gaps = 60/277 (21%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD--NVIFHQLD 64
           +  ++TG++ GIG       A  G    +T R  +   E  + +  SG     V     D
Sbjct: 6   KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVAD 65

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V        + +     FGK+D+LVNNAG              I +        Q  +  
Sbjct: 66  VTTEDGQDQIINSTLKQFGKIDVLVNNAGA------------AIPDAFGTTGTDQGIDIY 113

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
            K L+ N      M + + P L  S    +   S   G                      
Sbjct: 114 HKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAG---------------------- 151

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVC 242
                                     +   Y ++KAA++ YTR  A     F I  N V 
Sbjct: 152 ---------------------PQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVS 190

Query: 243 PGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           PG V+T  T NA  +  +   +   ++A   +  P G
Sbjct: 191 PGMVETGFT-NAMGMPDQASQKFYNFMASHKECIPIG 226

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (268), Expect = 2e-28
 Identities = 55/260 (21%), Positives = 91/260 (35%), Gaps = 66/260 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  VVTG  +GIG  +VR    +G   V+  +DE GG    ++L        +F   DV 
Sbjct: 7   KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-----GAVFILCDVT 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               + ++       FG+LD +VNNAG        +  S                +   +
Sbjct: 62  QEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETS---------------AQGFRQ 106

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+ N LG   + +  +P L+      ++N+SS +G                        
Sbjct: 107 LLELNLLGTYTLTKLALPYLR-KSQGNVINISSLVG------------------------ 141

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                  A A  Y+ +K A+ A T+ LA     + +  NC+ PG
Sbjct: 142 -------------------AIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPG 182

Query: 245 YVKTEMTYNAGRLTVEEGAE 264
            + T +      L  +  A 
Sbjct: 183 NIWTPLWEELAALMPDPRAS 202

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  107 bits (269), Expect = 4e-28
 Identities = 43/276 (15%), Positives = 74/276 (26%), Gaps = 71/276 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-----GLEAVEKLKHSGFDNVIFH 61
           R  +VTGA  G+G       A  G + V+            G  A +K+           
Sbjct: 8   RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA 67

Query: 62  QLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTY 121
             +     A   +       FG++D++VNNAGI    S +                  + 
Sbjct: 68  VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRI----------------SD 111

Query: 122 ESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAEN 181
           E  +   + +  G+ ++  A    ++  +  RI+  +S+ G                   
Sbjct: 112 EDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF-------------- 157

Query: 182 LTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--N 239
                                          A Y  +K  +      L  +     I  N
Sbjct: 158 -----------------------------GQANYSAAKLGLLGLANTLVIEGRKNNIHCN 188

Query: 240 CVCPGYVKTEMTYNAG-----RLTVEEGAESPVWLA 270
            + P                  L  E  A   +WL 
Sbjct: 189 TIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWLC 224

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  106 bits (265), Expect = 5e-28
 Identities = 59/285 (20%), Positives = 90/285 (31%), Gaps = 82/285 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TG   GIG  +  +    G   ++T R    G +A + +       + F Q D +
Sbjct: 7   KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD--QIQFFQHDSS 64

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D      + D     FG +  LVNNAGI    S  +T                T     K
Sbjct: 65  DEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEET----------------TTAEWRK 108

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDS-ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
            L  N  G        I  ++     A I+N+SS  G                       
Sbjct: 109 LLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF---------------------- 146

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCV 241
                                G P +  AY  SK A+   ++  A        +  +N V
Sbjct: 147 --------------------VGDP-SLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185

Query: 242 CPGYVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
            PGY+KT +  +                G +    + A   V+LA
Sbjct: 186 HPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLA 230

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  106 bits (265), Expect = 8e-28
 Identities = 53/277 (19%), Positives = 88/277 (31%), Gaps = 62/277 (22%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLD 64
           +  ++TG++ GIG       A  G    +T R+E    E  +++  +G   + +     D
Sbjct: 5   KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVAD 64

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V + +    + +   + FGK+DILVNNAG       A+T               Q  E  
Sbjct: 65  VTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANT--------------DQPVELY 110

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +K  + N+     M +     L  +    +   S   G                      
Sbjct: 111 QKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG---------------------- 148

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC 242
                                    +    Y  +KAA++ YTR  A         +N V 
Sbjct: 149 ---------------------PQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVS 187

Query: 243 PGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           PG V T      G L      +   ++    +  P G
Sbjct: 188 PGAVATGFMGAMG-LPETASDKLYSFIGSRKECIPVG 223

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  105 bits (263), Expect = 1e-27
 Identities = 51/249 (20%), Positives = 81/249 (32%), Gaps = 68/249 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTG   G+G EVV+ L   G     +  +E  G +   +L     +  +F + DV+
Sbjct: 7   KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----ERSMFVRHDVS 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             A    V   ++   G L++LVNNAGI                           E   +
Sbjct: 63  SEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETG----------------RLEDFSR 106

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+ N       C+  I  ++      I+N++S                           
Sbjct: 107 LLKINTESVFIGCQQGIAAMK-ETGGSIINMASVSSW----------------------- 142

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA----KKYPNFCINCVC 242
                                     A Y  SKAA++A TR  A    K+     +N + 
Sbjct: 143 -------------------LPIE-QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182

Query: 243 PGYVKTEMT 251
           P  + T M 
Sbjct: 183 PDGIYTPMM 191

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  105 bits (262), Expect = 2e-27
 Identities = 61/283 (21%), Positives = 91/283 (32%), Gaps = 79/283 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTG  KGIG+ +V + A  G +    AR+E    E + K +  GF  V     D +
Sbjct: 9   KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDAS 67

Query: 67  DPAAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
                  +   + S F GKLDIL+NN G        D                 T E   
Sbjct: 68  LRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDY----------------TAEDFS 111

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN   A  + +   PLL+ S    I+ +SS  G +                     
Sbjct: 112 FHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVG---------------- 155

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                      + Y  +K A+N   R LA ++ +  I  N V P
Sbjct: 156 ---------------------------SIYSATKGALNQLARNLACEWASDGIRANAVAP 188

Query: 244 GYVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
             + T +                   GR    EE +    +L 
Sbjct: 189 AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC 231

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  103 bits (259), Expect = 4e-27
 Identities = 57/248 (22%), Positives = 90/248 (36%), Gaps = 63/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
             A+VTG ++GIGY +V +LA  G      +R++K   + + + +  GF        D++
Sbjct: 9   CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV-EASVCDLS 67

Query: 67  DPAAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
             +    + + + +HF GKL+ILVNNAGI       D                 T E   
Sbjct: 68  SRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDY----------------TVEDYS 111

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             +  N+  A  +     P L+ S+   +V +SS  G                       
Sbjct: 112 LIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA---------------------- 149

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                  P  A     +K AM+  TR LA ++    I  N V P
Sbjct: 150 --------------------LAVPYEAVYGA-TKGAMDQLTRCLAFEWAKDNIRVNGVGP 188

Query: 244 GYVKTEMT 251
           G + T + 
Sbjct: 189 GVIATSLV 196

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 3e-26
 Identities = 57/281 (20%), Positives = 87/281 (30%), Gaps = 77/281 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL-KHSGFDNVIFHQLDV 65
           + A+VTGA +GIG      L L G    L   + + G++    L +       +F Q DV
Sbjct: 4   KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV 63

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           AD   +      +  HFG+LDILVNNAG+                           ++ E
Sbjct: 64  ADQQQLRDTFRKVVDHFGRLDILVNNAGV------------------------NNEKNWE 99

Query: 126 KCLQTNYLGAKRMCEALIPLL---QLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
           K LQ N +         +  +      +   I+N+SS  G                    
Sbjct: 100 KTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL------------------- 140

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI--LAKKYPNFCI-- 238
                                           Y  SK  +  +TR   LA    N  +  
Sbjct: 141 -----------------------MPVA-QQPVYCASKHGIVGFTRSAALAANLMNSGVRL 176

Query: 239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           N +CPG+V T +         E   +   +   +       
Sbjct: 177 NAICPGFVNTAIL--ESIEKEENMGQYIEYKDHIKDMIKYY 215

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  101 bits (252), Expect = 3e-26
 Identities = 57/281 (20%), Positives = 90/281 (32%), Gaps = 83/281 (29%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  ++TGA  GIG   +   A  G   V    +E    EA E +            +DVA
Sbjct: 6   KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVA 59

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DPA++        +H G+LD +V+ AGIT  +                       E  E 
Sbjct: 60  DPASVERGFAEALAHLGRLDGVVHYAGITRDNFHWKM----------------PLEDWEL 103

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+ N  G+  + +A    ++  +   IV  +S +                         
Sbjct: 104 VLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-------------------- 143

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                     A Y  S A +   TR LA +   + I  N + PG
Sbjct: 144 ------------------------GQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPG 179

Query: 245 YVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
           +++T MT                 GR     E A + ++L 
Sbjct: 180 FIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLL 220

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  101 bits (253), Expect = 4e-26
 Identities = 47/272 (17%), Positives = 84/272 (30%), Gaps = 60/272 (22%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            ++TG   G+G  +V +    G    +  +      E + +L+    DNV+    DV   
Sbjct: 8   VLITGGASGLGRALVDRFVAEGAKVAVLDKSA----ERLAELETDHGDNVLGIVGDVRSL 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                 A    + FGK+D L+ NAGI   S+    L                  + ++  
Sbjct: 64  EDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLP-----------EESLDAAFDEVF 112

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G     +A +P L  S    I  +S++             G + +          
Sbjct: 113 HINVKGYIHAVKACLPALVASRGNVIFTISNA-------------GFYPN---------- 149

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPGYVK 247
                                     Y  +K A+    R LA +  P   +N V  G + 
Sbjct: 150 ---------------------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGIN 188

Query: 248 TEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
           +++   +      +   +     +L    P G
Sbjct: 189 SDLRGPSSLGMGSKAISTVPLADMLKSVLPIG 220

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  100 bits (250), Expect = 7e-26
 Identities = 55/283 (19%), Positives = 96/283 (33%), Gaps = 77/283 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTG ++G+G+ + + LA  G   V+ +R+ +   EA +KL        +  + DV+
Sbjct: 6   RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS 65

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           +   +  + + ++  FGKLD +VN A   GI+                            
Sbjct: 66  NYEEVKKLLEAVKEKFGKLDTVVNAA---GINRRH------------------------- 97

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
                            P  +         +  +L    YV  E    +           
Sbjct: 98  -----------------PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRES-------- 132

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                              +    N +AY  SK  + + T+ LAK++  + I  N + PG
Sbjct: 133 -----DNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPG 187

Query: 245 YVKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
           + +T+MT                   GR    E+     V+LA
Sbjct: 188 WYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLA 230

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.1 bits (246), Expect = 3e-25
 Identities = 50/283 (17%), Positives = 84/283 (29%), Gaps = 67/283 (23%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLA---LNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIF 60
                V+TGA++G G  +  QLA     G + +++AR E    +  E+L     D  V+ 
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 61  HQLDVADPAAI----HSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGK 116
              D+   A +     +V +  R    +  +L+NNA   G  S      GF+        
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVS-----KGFLNV------ 113

Query: 117 MTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVF 176
                         N      +    +   Q S       V+ S    +           
Sbjct: 114 --NDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ---------- 161

Query: 177 SDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNF 236
                                                 Y   KAA +   ++LA + P+ 
Sbjct: 162 -------------------------------PYKGWGLYCAGKAARDMLYQVLAAEEPSV 190

Query: 237 CINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
            +    PG +  +M   A      E ++ P   + L K    G
Sbjct: 191 RVLSYAPGPLDNDMQQLAR-----ETSKDPELRSKLQKLKSDG 228

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 98.6 bits (245), Expect = 4e-25
 Identities = 58/276 (21%), Positives = 89/276 (32%), Gaps = 75/276 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+V+G  +G+G   VR +   G   V     ++ G     +L     D   +  LDV 
Sbjct: 7   KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVT 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
            PA   +  D   + FG L +LVNNAGI  I +  D                      ++
Sbjct: 63  QPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDY----------------ALTEWQR 106

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L  N  G      A++  ++ +    I+N+S                            
Sbjct: 107 ILDVNLTGVFLGIRAVVKPMKEAGRGSIINIS---------------------------- 138

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                          S E          Y  +K A+   T+  A +       +N + PG
Sbjct: 139 ---------------SIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 183

Query: 245 YVKTEMTYNA---------GRL-TVEEGAESPVWLA 270
            VKT MT            GR     E +   V+LA
Sbjct: 184 LVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLA 219

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 99.0 bits (246), Expect = 4e-25
 Identities = 39/260 (15%), Positives = 75/260 (28%), Gaps = 60/260 (23%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TG   GIG    +     G   V+    +  G +    +       + F   DV 
Sbjct: 7   KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD--VISFVHCDVT 64

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               + ++ D   +  GKLDI+  N G+   +  +               +    E  ++
Sbjct: 65  KDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSI--------------LEAGNEDFKR 110

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            +  N  GA  + +    ++  +    IV  +S                           
Sbjct: 111 VMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF----------------------- 147

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                    +  Y  +K A+   T  L  +   + I  NCV P 
Sbjct: 148 -------------------TAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPY 188

Query: 245 YVKTEMTYNAGRLTVEEGAE 264
            V + +  +   +      E
Sbjct: 189 IVASPLLTDVFGVDSSRVEE 208

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 96.7 bits (240), Expect = 1e-24
 Identities = 52/281 (18%), Positives = 87/281 (30%), Gaps = 75/281 (26%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNG-------IITVLTARDEKGGLEAVEKLKHSGFDNV 58
           K   ++TGA KGIG  +  + A           + VL++R      +   + +  G    
Sbjct: 1   KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALT 59

Query: 59  IFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMT 118
                D++D A +  +   I   +G +D LVNNAG+    +                   
Sbjct: 60  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGAL----------------SD 103

Query: 119 QTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSD 178
            T E  +  + TN  G   + +AL  L++   S  I  ++S                   
Sbjct: 104 LTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA---------------- 147

Query: 179 AENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI 238
                                     TK +  +++ Y +SK         +        +
Sbjct: 148 --------------------------TKAFR-HSSIYCMSKFGQRGLVETMRLYARKCNV 180

Query: 239 --NCVCPGYVKTEMT------YNAGRLTVEEGAESPVWLAL 271
               V PG V T M         A  +  E+ A   V   L
Sbjct: 181 RITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYL 221

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 97.0 bits (241), Expect = 2e-24
 Identities = 60/281 (21%), Positives = 102/281 (36%), Gaps = 77/281 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG E+ + LA +    +  +R +K     V+++K  G+     +  DV+
Sbjct: 11  KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVS 69

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               I  V + I +    +DILVN                          +    +  E 
Sbjct: 70  KKEEISEVINKILTEHKNVDILVN----------------NAGITRDNLFLRMKNDEWED 113

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L+TN      + + +   +  +   RI+N+SS +G                        
Sbjct: 114 VLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGL----------------------- 150

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                               G     A Y  SKA +  +T+ LAK+  +  I  N + PG
Sbjct: 151 -------------------TGNV-GQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPG 190

Query: 245 YVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
           ++ ++MT                AGR+ T EE A    +L+
Sbjct: 191 FISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLS 231

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 95.9 bits (238), Expect = 4e-24
 Identities = 34/273 (12%), Positives = 72/273 (26%), Gaps = 69/273 (25%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VT      G     +L+  G          K   + +E           + QL     
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ-KDELEAFA------ETYPQLKPMSE 55

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
                + + + S +G++D+LV+N          D                   E     +
Sbjct: 56  QEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKY---------------AVEDYRGAV 100

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           +   +    +  A+   ++   S  I+ ++S+     +                      
Sbjct: 101 EALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELST----------------- 143

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                                     Y  ++A        L+K+   + I    + P Y+
Sbjct: 144 --------------------------YTSARAGACTLANALSKELGEYNIPVFAIGPNYL 177

Query: 247 KTEMTYNAGRLTVEEGAESPVWLALLHKGGPSG 279
            +E +        E    +P  +A + K     
Sbjct: 178 HSEDS--PYFYPTEPWKTNPEHVAHVKKVTALQ 208

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.0 bits (236), Expect = 7e-24
 Identities = 47/281 (16%), Positives = 82/281 (29%), Gaps = 86/281 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA KGIG + V+ L  +G   V   R     +   ++        +    +D+ D 
Sbjct: 8   ALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDW 62

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A            G +D+LVNNA +  +    +                 T E+ ++  
Sbjct: 63  DATEKALG----GIGPVDLLVNNAALVIMQPFLEV----------------TKEAFDRSF 102

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N     ++ + +   +        +   SS+   +                       
Sbjct: 103 SVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV----------------------- 139

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                                 N   Y  +K AM   T+ +A +     I  N V P  V
Sbjct: 140 -------------------TFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVV 180

Query: 247 KTEMTYNA----------------GRL-TVEEGAESPVWLA 270
            T+M                     +   VE+   S ++L 
Sbjct: 181 LTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLL 221

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 94.4 bits (234), Expect = 2e-23
 Identities = 54/260 (20%), Positives = 92/260 (35%), Gaps = 60/260 (23%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           A+VTGA  GIG E+ R+L   G+   + AR E+G    +++L+ +G         DV   
Sbjct: 5   ALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSV 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
             I ++   +   +G +D+LVNNAG  G  + A+                   E     +
Sbjct: 64  PEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL----------------ADELWLDVV 107

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
           +TN  G  R+ + ++    + +      V+ +                            
Sbjct: 108 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQ---------------------- 145

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYV 246
                                 +AA Y  SK  +  +T+ L  +     I  N VCPG+V
Sbjct: 146 -------------------GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFV 186

Query: 247 KTEMTYNAGRLTVEEGAESP 266
           +T M  +      +    S 
Sbjct: 187 ETPMAASVREHYSDIWEVST 206

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 94.0 bits (233), Expect = 2e-23
 Identities = 50/283 (17%), Positives = 84/283 (29%), Gaps = 77/283 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  V+TG++ G+G  +  + A      V+  R ++    +V +         I  + DV 
Sbjct: 8   KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT 67

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
             + + ++       FGKLD+++NNAG+    S  +                 +     K
Sbjct: 68  VESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEM----------------SLSDWNK 111

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            + TN  GA       I     +D    V   SS+ + +                     
Sbjct: 112 VIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA----------- 160

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP--NFCINCVCPG 244
                                          SK  M   T  LA +Y      +N + PG
Sbjct: 161 -------------------------------SKGGMKLMTETLALEYAPKGIRVNNIGPG 189

Query: 245 YVKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
            + T +                    G +   EE A    WLA
Sbjct: 190 AINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLA 232

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.1 bits (233), Expect = 2e-23
 Identities = 54/264 (20%), Positives = 83/264 (31%), Gaps = 64/264 (24%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA+KGIG E+   LA  G   V+TAR ++   + V      G  +  +    + 
Sbjct: 15  KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTME 74

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D               G LD+L+ N                     +            K
Sbjct: 75  DMTFAEQFVAQAGKLMGGLDMLILNHIT----------------NTSLNLFHDDIHHVRK 118

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++ N+L    +  A +P+L+   +  IV VSS  GK+ Y                    
Sbjct: 119 SMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAY-------------------- 157

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVC 242
                                     AAY  SK A++ +   + K+Y     N  I    
Sbjct: 158 -----------------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCV 194

Query: 243 PGYVKTEMTYNAGRLTVEEGAESP 266
            G + TE    A    V   A   
Sbjct: 195 LGLIDTETAMKAVSGIVHMQAAPK 218

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 93.6 bits (231), Expect = 3e-23
 Identities = 55/288 (19%), Positives = 91/288 (31%), Gaps = 49/288 (17%)

Query: 7   RYAVVTGANKGIGYEVVRQL---ALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQL 63
              ++TG N+G+G  +V+ L            T R+ +   E  +  K+    +++   L
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 64  DVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
              D            +    L++L NNAGI   S+                      + 
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSAR---------------ITAVRSQE 107

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
               LQTN +    + +A +PLL+ +  A            M V       + S      
Sbjct: 108 LLDTLQTNTVVPIMLAKACLPLLKKAAKANESQP-------MGVGRAAIINMSSIL---- 156

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                                         AY  SK+A+NA T+ L+       I    +
Sbjct: 157 ------------------GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSL 198

Query: 242 CPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL 289
            PG+VKT+M  ++  L V       V          +G F +     L
Sbjct: 199 HPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL 246

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 91.7 bits (227), Expect = 2e-22
 Identities = 48/247 (19%), Positives = 83/247 (33%), Gaps = 62/247 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+ TGA +GIG  +  +L   G   V+         E V           +  Q D++
Sbjct: 7   KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS 66

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
            P+ + ++ D   SHFG LD +++N+G+     + +                 T E  +K
Sbjct: 67  KPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEV----------------TQELFDK 110

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N  G   + +  +   +      + +  +++                         
Sbjct: 111 VFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV------------------------- 145

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                               G P N A Y  SKAA+  + R  A       +  NC+ PG
Sbjct: 146 ------------------MTGIP-NHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPG 186

Query: 245 YVKTEMT 251
            VKT+M 
Sbjct: 187 GVKTDMF 193

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.0 bits (228), Expect = 2e-22
 Identities = 50/264 (18%), Positives = 88/264 (33%), Gaps = 66/264 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK----HSGFDNVIFHQ 62
           + A+VTG   GIG  +V++L   G   V+ +R  +    A ++L+     +    VI  Q
Sbjct: 13  QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQ 72

Query: 63  LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYE 122
            ++ +   ++++       FGK++ LVNN G   +S                     + +
Sbjct: 73  CNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHI----------------SSK 116

Query: 123 SAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
                L+TN  G   MC+A+           IVN+                         
Sbjct: 117 GWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP---------------------- 154

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NC 240
                                 TK     A     ++A +   T+ LA ++    I  NC
Sbjct: 155 ----------------------TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINC 192

Query: 241 VCPGYVKTEMTYNAGRLTVEEGAE 264
           V PG + ++          +   E
Sbjct: 193 VAPGVIYSQTAVENYGSWGQSFFE 216

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.7 bits (222), Expect = 7e-22
 Identities = 52/284 (18%), Positives = 86/284 (30%), Gaps = 88/284 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTGA KGIG   V+ L   G   V  +R +      V +        +    +D+ 
Sbjct: 8   RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLG 62

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A            G +D+LVNNA +  +    +                 T E+ ++
Sbjct: 63  DWEATERALG----SVGPVDLLVNNAAVALLQPFLEV----------------TKEAFDR 102

Query: 127 CLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + N     ++ + +   L        IVNVSS   +                      
Sbjct: 103 SFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR--------------------- 141

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                    N + Y  +K A++  T+++A +     I  N V P
Sbjct: 142 ----------------------AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179

Query: 244 GYVKTEMTYNA----------------GRL-TVEEGAESPVWLA 270
             V T M                    G+   VE    + ++L 
Sbjct: 180 TVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLL 223

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 88.2 bits (218), Expect = 3e-21
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TGA  GIG E+    A  G   V++  +       V++++  G       + D+ 
Sbjct: 12  KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDIT 70

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGF 107
               + ++ADF  S  GK+DILVNNAG  G       ++ F
Sbjct: 71  SEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADF 111

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 36.2 bits (83), Expect = 0.003
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 18/87 (20%)

Query: 202 SPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPGYVKTEMTYNA----- 254
           S   +    N  +Y  SKAA +   R +A       I  N + PG + T+   +      
Sbjct: 146 SMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEI 205

Query: 255 ----------GRL-TVEEGAESPVWLA 270
                      RL   ++ A + ++L 
Sbjct: 206 EQKMLQHTPIRRLGQPQDIANAALFLC 232

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 87.9 bits (217), Expect = 4e-21
 Identities = 59/248 (23%), Positives = 90/248 (36%), Gaps = 63/248 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
             A+VTG +KGIGY +V +LA  G      +R+EK   E +E  +  G  NV     D+ 
Sbjct: 7   TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLL 65

Query: 67  DPAAIHSVADFIRSHF-GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
                  +   +   F GKL+ILVNNAG+       D                 T +   
Sbjct: 66  SRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDF----------------TEKDYN 109

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
             + TN+  A  + +   PLL+ S +  ++ +SS  G     +                 
Sbjct: 110 IIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSV---------------- 153

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                      + Y  SK A+N  T+ LA ++    I  N V P
Sbjct: 154 ---------------------------SLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 186

Query: 244 GYVKTEMT 251
           G + T + 
Sbjct: 187 GVILTPLV 194

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 87.6 bits (216), Expect = 6e-21
 Identities = 46/263 (17%), Positives = 81/263 (30%), Gaps = 61/263 (23%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           K+ A+VTGA +GIG  +  +L  +G    +   ++        ++  +G  + +  ++DV
Sbjct: 1   KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDV 59

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D   + +  +  R   G  D++VNNAG+   +                     T E  +
Sbjct: 60  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESI----------------TPEIVD 103

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEE 185
           K    N  G     +A +   +       +  + S    +                    
Sbjct: 104 KVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSS---------- 153

Query: 186 RVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCP 243
                                           SK A+   T+  A+      I  N  CP
Sbjct: 154 --------------------------------SKFAVRGLTQTAARDLAPLGITVNGYCP 181

Query: 244 GYVKTEMTYNAGRLTVEEGAESP 266
           G VKT M     R   E   +  
Sbjct: 182 GIVKTPMWAEIDRQVSEAAGKPL 204

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 86.7 bits (214), Expect = 1e-20
 Identities = 50/280 (17%), Positives = 88/280 (31%), Gaps = 76/280 (27%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            VVTGA++GIG  +   L   G   ++         E V K   +     I    DV+  
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A + ++       +G +D++VN                          +       ++ +
Sbjct: 64  ADVEAMMKTAIDAWGTIDVVVN----------------NAGITRDTLLIRMKKSQWDEVI 107

Query: 129 QTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVD 188
             N  G     +A   ++      RI+N++S +G                          
Sbjct: 108 DLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL------------------------- 142

Query: 189 EVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYV 246
                             G     A Y  +KA +  +++  A++    N  +N VCPG++
Sbjct: 143 -----------------IGNI-GQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFI 184

Query: 247 KTEMTYNA--------------GRL-TVEEGAESPVWLAL 271
            ++MT                 GR    E  A    +LAL
Sbjct: 185 ASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLAL 224

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 85.9 bits (212), Expect = 2e-20
 Identities = 44/236 (18%), Positives = 86/236 (36%), Gaps = 21/236 (8%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD-NVIFHQLDV 65
           R  ++TG   G+G     +LA  G    L     +G   +   +  +  D  V+    DV
Sbjct: 5   RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV 64

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
           +D A + +        FG++D   NNAGI G  +  ++ +    + V    +   +   E
Sbjct: 65  SDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 124

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWA-----KGVFSDA- 179
           K L+        M      +  +         +++   ++ +T   A      G+  +A 
Sbjct: 125 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 184

Query: 180 ----------ENLTEERVDEVLSQYLNDYKEGSPETK-GWP---ANAAAYILSKAA 221
                     EN  ++   E   +   ++ + +P  + G     A   A++LS  A
Sbjct: 185 APGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 210 ANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGAE 264
            N + Y  +K  +   TR  A +Y      IN + PG + T M  N+ +    E   
Sbjct: 151 GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPR 207

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 4e-20
 Identities = 45/257 (17%), Positives = 74/257 (28%), Gaps = 68/257 (26%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNG---IITVLTARDEK--GGLEAVEKLKHSGFDNVI 59
           A+   ++TG + GIG  +  +LA +         T RD K  G L    +       ++ 
Sbjct: 1   ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLE 60

Query: 60  FHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
             QLDV D  ++ +  + +                       D L      G+       
Sbjct: 61  TLQLDVRDSKSVAAARERVTEGRV------------------DVLVCNAGLGLLGPLEAL 102

Query: 120 TYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDA 179
             ++    L  N +G  RM +A +P ++   S R++   S  G                 
Sbjct: 103 GEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL---------------- 146

Query: 180 ENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI- 238
                                      G P     Y  SK A+      LA     F + 
Sbjct: 147 --------------------------MGLP-FNDVYCASKFALEGLCESLAVLLLPFGVH 179

Query: 239 -NCVCPGYVKTEMTYNA 254
            + +  G V T      
Sbjct: 180 LSLIECGPVHTAFMEKV 196

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 85.2 bits (210), Expect = 5e-20
 Identities = 46/247 (18%), Positives = 74/247 (29%), Gaps = 62/247 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA +GIG E+  +L   G   ++   +     E V         +    + +V 
Sbjct: 19  KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG 78

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               I  + +     FGKLDI+ +N+G+       D                 T E  ++
Sbjct: 79  VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDV----------------TPEEFDR 122

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N  G   +                              H    G            
Sbjct: 123 VFTINTRGQFFVAREAYK------------------------HLEIGG------------ 146

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                   L     G  +     A  +    SK A+  + R +A    +  I  N V PG
Sbjct: 147 -----RLILMGSITGQAKAVPKHAVYSG---SKGAIETFARCMAIDMADKKITVNVVAPG 198

Query: 245 YVKTEMT 251
            +KT+M 
Sbjct: 199 GIKTDMY 205

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 84.8 bits (209), Expect = 5e-20
 Identities = 55/250 (22%), Positives = 81/250 (32%), Gaps = 61/250 (24%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +VTGA   IG     +LA  G    L   + +   +A   ++  G      +  DV 
Sbjct: 6   KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-VEARSYVCDVT 64

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
              A+    D +   FGK+D L NNAG  G  +                      +   +
Sbjct: 65  SEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAP---------------VQDYPSDDFAR 109

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L  N  GA  + +A+   +   +  RIVN +S  G                        
Sbjct: 110 VLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGV----------------------- 146

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                              KG P N AAY  SK A+ A T   A     + I  N + PG
Sbjct: 147 -------------------KGPP-NMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPG 186

Query: 245 YVKTEMTYNA 254
           Y+     +  
Sbjct: 187 YMGPGFMWER 196

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 84.0 bits (207), Expect = 9e-20
 Identities = 72/281 (25%), Positives = 111/281 (39%), Gaps = 80/281 (28%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A+VTGA++GIG  +   LA  G   + TA  E G     + L      N     L+V 
Sbjct: 5   KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGA----NGKGLMLNVT 60

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DPA+I SV + IR+ FG++DILVNNAGIT                     M    E    
Sbjct: 61  DPASIESVLEKIRAEFGEVDILVNNAGITRD----------------NLLMRMKDEEWND 104

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++TN     R+ +A++  +      RI+ + S +G +                      
Sbjct: 105 IIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTM---------------------- 142

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                               G     A Y  +KA +  +++ LA++  +  I  N V PG
Sbjct: 143 --------------------GNG-GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG 181

Query: 245 YVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
           +++T+MT                AGRL   +E A +  +LA
Sbjct: 182 FIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLA 222

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 84.4 bits (208), Expect = 1e-19
 Identities = 44/284 (15%), Positives = 83/284 (29%), Gaps = 78/284 (27%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A +TG   G+G  +   L+  G   V+ +R         E++     + V   Q DV 
Sbjct: 26  KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR 85

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           DP  + +    +    G  +I++NNA    IS                     +  + + 
Sbjct: 86  DPDMVQNTVSELIKVAGHPNIVINNAAGNFISPT----------------ERLSPNAWKT 129

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
                  G   +   +   L  +         +++                         
Sbjct: 130 ITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS----------- 178

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                          +KA + A ++ LA ++  + +  N + PG
Sbjct: 179 -------------------------------AKAGVEAMSKSLAAEWGKYGMRFNVIQPG 207

Query: 245 YVKTEMTYN-----------------AGRL-TVEEGAESPVWLA 270
            +KT+  ++                  GRL TVEE A    +L 
Sbjct: 208 PIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLC 251

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 83.8 bits (206), Expect = 1e-19
 Identities = 44/283 (15%), Positives = 79/283 (27%), Gaps = 64/283 (22%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA-VEKLKHSGFDNVIFHQLDVAD 67
           AV+TG  + IG+ +  +L   G   V+  R  +G  +  V +L  +   + +  + D++ 
Sbjct: 4   AVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL 63

Query: 68  PA----AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYES 123
            +        + D     FG+ D+LVNNA           L G    G A  K       
Sbjct: 64  SSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYY---PTPLLPGDDTNGAADAKPIDAQV- 119

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
             +   +N +    +  A                    G      +     +     +  
Sbjct: 120 -AELFGSNAVAPLFLIRAFARRQG-------------EGGAWRSRNLSVVNLCDAMTD-- 163

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCV 241
                                          Y ++K A+   TR  A +     I  N V
Sbjct: 164 -----------------------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAV 200

Query: 242 CPGYVKTEMTYNAGRL--------------TVEEGAESPVWLA 270
            PG                           +  + A++  +L 
Sbjct: 201 APGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLV 243

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 51/253 (20%), Positives = 79/253 (31%), Gaps = 70/253 (27%)

Query: 1   MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIF 60
           M     +  ++T A +GIG       A  G   + T  +E   L+ +EK     +  +  
Sbjct: 1   MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINES-KLQELEK-----YPGIQT 54

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
             LDV     I        +   +LD+L N AG     +  D                  
Sbjct: 55  RVLDVTKKKQIDQ----FANEVERLDVLFNVAGFVHHGTVLDC----------------E 94

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            +  +  +  N      M +A +P +    S  I+N+SS    +                
Sbjct: 95  EKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---------------- 138

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                    KG   N   Y  +KAA+   T+ +A  +    I  
Sbjct: 139 -------------------------KGVV-NRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 239 NCVCPGYVKTEMT 251
           NCVCPG V T   
Sbjct: 173 NCVCPGTVDTPSL 185

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 76.3 bits (187), Expect = 5e-17
 Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          +  +VTGA  GIG   +   A  G   V   R+E+   EAV  L+       I    DV+
Sbjct: 6  KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE----AEAIAVVADVS 61

Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGITG 96
          DP A+ +V       FG+L  + + AG+  
Sbjct: 62 DPKAVEAVFAEALEEFGRLHGVAHFAGVAH 91

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 40.8 bits (95), Expect = 7e-05
 Identities = 18/80 (22%), Positives = 28/80 (35%), Gaps = 17/80 (21%)

Query: 208 WPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYN------------ 253
                A Y   K  +    R LA +       +N + PG ++T MT              
Sbjct: 141 GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA 200

Query: 254 --AGRL-TVEEGAESPVWLA 270
              GR    EE A++ ++L 
Sbjct: 201 SPLGRAGRPEEVAQAALFLL 220

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 73.7 bits (180), Expect = 5e-16
 Identities = 40/247 (16%), Positives = 70/247 (28%), Gaps = 64/247 (25%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + A++TG+ +GIG          G    +   + +       ++            LDV 
Sbjct: 6   KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG----PAACAIALDVT 61

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A+I      +   +G +DILVNNA +  ++   +                 T ES ++
Sbjct: 62  DQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEI----------------TRESYDR 105

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               N  G   M +A+   +                    +      G            
Sbjct: 106 LFAINVSGTLFMMQAVARAMIAGG-----------RGGKIINMASQAGRRG--------- 145

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG 244
                                  A    Y  +KAA+ + T+            +N + PG
Sbjct: 146 ----------------------EALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPG 183

Query: 245 YVKTEMT 251
            V  E  
Sbjct: 184 VVDGEHW 190

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 73.7 bits (180), Expect = 6e-16
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQLDV 65
          + AVVTG+  GIG  +   LA  G   VL    +   +E V   L       V++   D+
Sbjct: 5  KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL 64

Query: 66 ADPAAIHSVADFIRSHFGKLDILVNN 91
          +   A+  + D      G++DILVNN
Sbjct: 65 SKGEAVRGLVDNAVRQMGRIDILVNN 90

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 44.8 bits (105), Expect = 4e-06
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 208 WPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGA-- 263
             AN +AY+ +K  +  +T++ A +        N +CPG+V+T +         E+    
Sbjct: 148 ASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVD 207

Query: 264 ESPVWLALLHKGGPSG 279
           +      LL +  PS 
Sbjct: 208 QETAARELLSEKQPSL 223

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 70.1 bits (171), Expect = 7e-15
 Identities = 50/281 (17%), Positives = 84/281 (29%), Gaps = 88/281 (31%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +VTG N+GIG  + ++LA +G    +T R                   +   ++DV 
Sbjct: 8   RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------KGLFGVEVDVT 55

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D  A+      +  H G +++LV+NAG++  +          E+ +          +   
Sbjct: 56  DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRA 115

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
                     RM               I +VS   G      +  +K             
Sbjct: 116 SRSMQRNKFGRMI-------------FIGSVSGLWGIGNQANYAASK------------- 149

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                            A +    R +A++     +  N V PG
Sbjct: 150 ---------------------------------AGVIGMARSIARELSKANVTANVVAPG 176

Query: 245 YVKTEMTYN--------------AGRL-TVEEGAESPVWLA 270
           Y+ T+MT                A R+ T  E A    +LA
Sbjct: 177 YIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLA 217

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.5 bits (164), Expect = 6e-14
 Identities = 27/277 (9%), Positives = 58/277 (20%), Gaps = 84/277 (30%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R  +V G    +G   V+               E     A            +  ++  +
Sbjct: 3   RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA-----------SVIVKMTDS 51

Query: 67  DPAAIHSVADFIRSHFG--KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
                  V   +    G  K+D ++  AG     +                     +++ 
Sbjct: 52  FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKS---------------KSLFKNC 96

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
           +   + +   +            L +   +    +                         
Sbjct: 97  DLMWKQSIWTSTISSHLATK--HLKEGGLLTLAGAKAALDGTPGMIG------------- 141

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINC 240
                                         Y ++K A++   + LA K            
Sbjct: 142 ------------------------------YGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 171

Query: 241 VCPGYVKTEMTYNA------GRLT-VEEGAESPVWLA 270
           V P  + T M   +         T +E   E+     
Sbjct: 172 VLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWI 208

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.6 bits (164), Expect = 9e-14
 Identities = 42/285 (14%), Positives = 82/285 (28%), Gaps = 80/285 (28%)

Query: 7   RYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           + A+V G    + +G+ +  +L   G    L+ + E+   EA +  +  G   +      
Sbjct: 9   KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRAD-- 66

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           V     + ++   ++  FG LD LV+        +                 +    +  
Sbjct: 67  VTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRY------------IDTRRQDW 114

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTE 184
              L+ +      +     PLL+  +   IV ++    +                     
Sbjct: 115 LLALEVSAYSLVAVARRAEPLLR--EGGGIVTLTYYASE--------------------- 151

Query: 185 ERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC 242
                                K  P       ++KAA+ A  R LA +       +N + 
Sbjct: 152 ---------------------KVVP-KYNVMAIAKAALEASVRYLAYELGPKGVRVNAIS 189

Query: 243 PGYVKTEMTYN----------------AGRL-TVEEGAESPVWLA 270
            G V+T    +                  R  T EE     ++L 
Sbjct: 190 AGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL 234

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 66.8 bits (162), Expect = 1e-13
 Identities = 26/252 (10%), Positives = 59/252 (23%), Gaps = 77/252 (30%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            +V G    +G  ++     NG   +          ++            I    +    
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS-----------NILVDGNKNWT 53

Query: 69  AAIHSVADFIRS--HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               S+ +   S     ++D +   AG     S +                    ++A+ 
Sbjct: 54  EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSAS---------------SKDFVKNADL 98

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            ++ +   +    +       L     +    ++       +                  
Sbjct: 99  MIKQSVWSSAIAAKLATT--HLKPGGLLQLTGAAAAMGPTPSMIG--------------- 141

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCINCVC 242
                                       Y ++KAA++  T  LA K      N  +  + 
Sbjct: 142 ----------------------------YGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIM 173

Query: 243 PGYVKTEMTYNA 254
           P  + T M    
Sbjct: 174 PVTLDTPMNRKW 185

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 64.7 bits (157), Expect = 7e-13
 Identities = 51/282 (18%), Positives = 80/282 (28%), Gaps = 93/282 (32%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +  +V  A++GIG  V   L+  G    + AR+E       E LK SG      H+  V 
Sbjct: 5   KGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSG------HRYVVC 51

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D   +    D +     ++DILV NAG                 G       + ++ A  
Sbjct: 52  D---LRKDLDLLFEKVKEVDILVLNAGGPKA-------------GFFDELTNEDFKEAID 95

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
            L  N +   R     +          I + S         T   A+             
Sbjct: 96  SLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSAR------------- 142

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                                             A+  + + L+ +   + I  NCV PG
Sbjct: 143 ---------------------------------MALTGFLKTLSFEVAPYGITVNCVAPG 169

Query: 245 YVKTEMTYNA---------------GRL-TVEEGAESPVWLA 270
           + +TE                     R+   EE A    +L 
Sbjct: 170 WTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLC 211

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 64.4 bits (156), Expect = 8e-13
 Identities = 44/288 (15%), Positives = 73/288 (25%), Gaps = 93/288 (32%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           R A+VTG   G+G      L   G   V+     +G              ++I+ + DV 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-------------DLIYVEGDVT 48

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
               +       +       ++                     E +   +     ES  +
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLA-------------EKILGKEGPHGLESFRR 95

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDS------ARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
            L+ N LG   +       ++ +          IVN +S                     
Sbjct: 96  VLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF----------------- 138

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI-- 238
                                    +G     AAY  SK  + A T   A++   + I  
Sbjct: 139 -------------------------EGQI-GQAAYAASKGGVVALTLPAARELAGWGIRV 172

Query: 239 NCVCPGYVKTEMTYN---------------AGRL-TVEEGAESPVWLA 270
             V PG   T +                    RL   EE A   + + 
Sbjct: 173 VTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHIL 220

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 63.4 bits (153), Expect = 2e-12
 Identities = 36/287 (12%), Positives = 67/287 (23%), Gaps = 85/287 (29%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
            V++G   GIG    + L   G   V     +   +                   D++  
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------------DLSTA 45

Query: 69  AAI-HSVADFIRSHFGKLDILVNNAGITGISSDADTLSG----FIEEGVARGKMTQTYES 123
                ++AD +      +D LV  AG+   +     +         E +           
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH 105

Query: 124 AEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
               +  + + +  +     PL    ++       + +                      
Sbjct: 106 QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHA------------------- 146

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV 241
                                  G      AY  SK A+    R  A  +      +N +
Sbjct: 147 -----------------------GEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTI 183

Query: 242 CPGYVKTEMTYNA-----------------GRL-TVEEGAESPVWLA 270
            PG  +T +                     GR     E A    +L 
Sbjct: 184 APGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLM 230

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 61.8 bits (149), Expect = 7e-12
 Identities = 43/283 (15%), Positives = 82/283 (28%), Gaps = 79/283 (27%)

Query: 9   AVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
            +VTG      I Y + + +   G     T +++K      E     G  + I  Q DVA
Sbjct: 8   ILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVA 65

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           + A+I ++   +   + K D  V++ G               ++         T E  + 
Sbjct: 66  EDASIDTMFAELGKVWPKFDGFVHSIGFAP-----------GDQLDGDYVNAVTREGFKI 114

Query: 127 CLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEER 186
               +      M +A      L+  + ++ +S    +                       
Sbjct: 115 AHDISSYSFVAMAKACRS--MLNPGSALLTLSYLGAE----------------------- 149

Query: 187 VDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCI--NCVCPG 244
                              +  P N     L+KA++ A  R +A       +  N +  G
Sbjct: 150 -------------------RAIP-NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAG 189

Query: 245 YVKTEMTYN----------------AGRL-TVEEGAESPVWLA 270
            ++T                       R  T+E+   S  +L 
Sbjct: 190 PIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLC 232

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 60.8 bits (146), Expect = 2e-11
 Identities = 23/113 (20%), Positives = 35/113 (30%), Gaps = 18/113 (15%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAV-EKLKHSGFDNVIFHQ----- 62
           A+VTGA K +G  +   L   G    L          A+   L     ++ I  Q     
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 63  ------------LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADT 103
                         V        +     +H+G+ D+LVNNA     +     
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 117

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 3e-11
 Identities = 50/286 (17%), Positives = 81/286 (28%), Gaps = 81/286 (28%)

Query: 9   AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           AV+TG   G+G     +L   G   VL      GG    +KL ++          +    
Sbjct: 8   AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQ 67

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
            A+       +  FG++D+ VN AGI   S   +   G           T T E  ++ L
Sbjct: 68  TALA----LAKGKFGRVDVAVNCAGIAVASKTYNLKKG----------QTHTLEDFQRVL 113

Query: 129 QTNYLGAKRMCEALIPLLQLSD------SARIVNVSSSLGKLMYVTHEWAKGVFSDAENL 182
             N +G   +   +   +  ++         I+N +S                       
Sbjct: 114 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAF------------------- 154

Query: 183 TEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC-- 240
                                  +G     AAY  SK  +   T  +A+      I    
Sbjct: 155 -----------------------EGQV-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMT 190

Query: 241 VCPGYVKTEMTYN---------------AGRL-TVEEGAESPVWLA 270
           + PG   T +  +                 RL    E A     + 
Sbjct: 191 IAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII 236

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 50.5 bits (119), Expect = 6e-08
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 4/87 (4%)

Query: 9  AVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           ++ G   NK I Y + +     G     T  +E    + V  +     ++   ++LDV+
Sbjct: 8  GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL-NSPYVYELDVS 65

Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAG 93
                S+ + ++   G LD +V++  
Sbjct: 66 KEEHFKSLYNSVKKDLGSLDFIVHSVA 92

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 48.6 bits (114), Expect = 3e-07
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 2/90 (2%)

Query: 9  AVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           +V+G   +  I + + R     G   VLT  D    ++ +     +    +     +  
Sbjct: 9  ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEE 68

Query: 67 DPAAIHSVADFIRSHFGKLDILVNNAGITG 96
            A++            KLD +V++ G   
Sbjct: 69 HLASLAGRVTEAIGAGNKLDGVVHSIGFMP 98

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 44.2 bits (103), Expect = 9e-06
 Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 25/130 (19%)

Query: 11  VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
           VTG +  IG     QL  NG   ++           +  ++  G  +  F + D+ + A 
Sbjct: 5   VTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEAL 64

Query: 71  IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQT 130
           +  +      H   +D +++ AG+  +                     ++ +   +    
Sbjct: 65  MTEI-----LHDHAIDTVIHFAGLKAVG--------------------ESVQKPLEYYDN 99

Query: 131 NYLGAKRMCE 140
           N  G  R+  
Sbjct: 100 NVNGTLRLIS 109

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.0 bits (103), Expect = 9e-06
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 30/156 (19%)

Query: 9   AVVTGANKGIGYEVVRQLALNG----IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
           A++TG     G  +   L   G     I    +      ++ + +  H+       H  D
Sbjct: 4   ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGD 63

Query: 65  VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESA 124
           ++D + +            + D + N   ++ +                      ++ES 
Sbjct: 64  LSDTSNLTR-----ILREVQPDEVYNLGAMSHV--------------------AVSFESP 98

Query: 125 EKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 160
           E     + +G  R+ EA+   L L    R    S+S
Sbjct: 99  EYTADVDAMGTLRLLEAIR-FLGLEKKTRFYQASTS 133

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 41.8 bits (97), Expect = 2e-05
 Identities = 21/159 (13%), Positives = 35/159 (22%), Gaps = 30/159 (18%)

Query: 7   RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
           + AVV      +G      LA  G   VL  R       A + +       V     + A
Sbjct: 24  KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK--VNVTAAETA 81

Query: 67  DPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEK 126
           D A+                 +     I                    G       + + 
Sbjct: 82  DDAS-------RAEAVKGAHFVFTAGAI--------------------GLELLPQAAWQN 114

Query: 127 CLQTNYLGAKRMC-EALIPLLQLSDSARIVNVSSSLGKL 164
                 +          I  +  +D  +      + G L
Sbjct: 115 ESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGAL 153

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 37/230 (16%), Positives = 73/230 (31%), Gaps = 56/230 (24%)

Query: 11  VTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP 68
           +TG    IG  VVR +  N    +  +      G LE++  +  S  +   F   D+ D 
Sbjct: 5   ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISES--NRYNFEHADICDS 62

Query: 69  AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCL 128
           A I  + +       + D +++ A  + +                     ++       +
Sbjct: 63  AEITRIFEQY-----QPDAVMHLAAESHV--------------------DRSITGPAAFI 97

Query: 129 QTNYLGAKRMCEALI-----PLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLT 183
           +TN +G   + E              ++ R  ++S+               V+ D  +  
Sbjct: 98  ETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDE-------------VYGDLPHPD 144

Query: 184 EERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY 233
           E      L  +          T   P++   Y  SKA+ +   R   + Y
Sbjct: 145 EVENSVTLPLFTET-------TAYAPSS--PYSASKASSDHLVRAWRRTY 185

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 41.4 bits (95), Expect = 6e-05
 Identities = 12/120 (10%), Positives = 32/120 (26%), Gaps = 33/120 (27%)

Query: 9   AVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK--------------- 51
             + G     G G+ + ++L+   +  +         +                      
Sbjct: 5   CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64

Query: 52  ----------------HSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDILVNNAGIT 95
                               +     + ++     I  VA+ I   +GK+++LV++    
Sbjct: 65  NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANA 124

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.2 bits (95), Expect = 8e-05
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 5/87 (5%)

Query: 11 VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
          VTG    IG   V +L  NG   V+         ++V +L+     ++ F+++D+ D   
Sbjct: 6  VTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKG 65

Query: 71 IHSVADFIRSHFGKLDILVNNAGITGI 97
          +  V         K+D +++ AG+  +
Sbjct: 66 LEKV-----FKEYKIDSVIHFAGLKAV 87

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 40.4 bits (93), Expect = 8e-05
 Identities = 15/85 (17%), Positives = 29/85 (34%), Gaps = 2/85 (2%)

Query: 7  RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA 66
          R A++ G    +G  +  +LA  G   V+ +R E+       + +    D      +   
Sbjct: 2  RVALLGGT-GNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGD-ASITGMKNE 59

Query: 67 DPAAIHSVADFIRSHFGKLDILVNN 91
          D A    +A         +D   + 
Sbjct: 60 DAAEACDIAVLTIPWEHAIDTARDL 84

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 39.6 bits (91), Expect = 2e-04
 Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 4/58 (6%)

Query: 9  AVVTGANKGIGYEVVRQLALNG----IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ 62
           +VTG   G+G ++ R LA  G    ++   +  D  G  E V +L+  G    +   
Sbjct: 12 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAAC 69

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 3e-04
 Identities = 34/242 (14%), Positives = 72/242 (29%), Gaps = 63/242 (26%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNG----IITVLTARDEKGGLEAVEKLKHSGF-DNVIF 60
           +  A++TG     G  +   L   G     I   ++    G +E + K   +    N+  
Sbjct: 1   RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKL 60

Query: 61  HQLDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQT 120
           H  D+ D   +  + + ++                            I    A+  +  +
Sbjct: 61  HYGDLTDSTCLVKIINEVKPT-------------------------EIYNLGAQSHVKIS 95

Query: 121 YESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAE 180
           ++ AE     + +G  R+ +A+     L +S +    S+S              ++   +
Sbjct: 96  FDLAEYTADVDGVGTLRLLDAVK-TCGLINSVKFYQASTS-------------ELYGKVQ 141

Query: 181 NLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC 240
            +                KE +P     P     Y  +K           + Y  F +N 
Sbjct: 142 EI--------------PQKETTPFYPRSP-----YGAAKLYAYWIVVNFREAYNLFAVNG 182

Query: 241 VC 242
           + 
Sbjct: 183 IL 184

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 39.1 bits (89), Expect = 4e-04
 Identities = 12/77 (15%), Positives = 20/77 (25%), Gaps = 3/77 (3%)

Query: 6  KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          KR   VTG     G  +   L   G      +          E  + +  D +     D+
Sbjct: 9  KR-VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVA--DGMQSEIGDI 65

Query: 66 ADPAAIHSVADFIRSHF 82
           D   +       +   
Sbjct: 66 RDQNKLLESIREFQPEI 82

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 38.7 bits (89), Expect = 5e-04
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 7/146 (4%)

Query: 5   AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL---EAVEKL-KHSGFDNVIF 60
           AK+   + G    +G  + RQL   G + ++    ++  L    AV         D V  
Sbjct: 1   AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYL 60

Query: 61  HQLDVADPAA-IHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQ 119
               V    A     ADFI  +      +++ A    ++      S  I   +A+  M +
Sbjct: 61  AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAE 120

Query: 120 TYESAEKCLQTN--YLGAKRMCEALI 143
           +         TN  Y  AK     L 
Sbjct: 121 SELLQGTLEPTNEPYAIAKIAGIKLC 146

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 25/155 (16%), Positives = 48/155 (30%), Gaps = 39/155 (25%)

Query: 6   KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
           ++  ++TG    +G  +  +L ++G    +      G    VE     G +N      DV
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDV 58

Query: 66  ADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAE 125
            +P             + ++D + + A                              +  
Sbjct: 59  VEPL------------YIEVDQIYHLASPASP--------------------PNYMYNPI 86

Query: 126 KCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS 160
           K L+TN +G   M             AR++  S+S
Sbjct: 87  KTLKTNTIGTLNMLGLA-----KRVGARLLLASTS 116

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 16/72 (22%), Positives = 24/72 (33%)

Query: 11 VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA 70
          VTG    IG   V  +  N     +T  D+         L+    D V     D+AD   
Sbjct: 7  VTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAEL 66

Query: 71 IHSVADFIRSHF 82
          +  +A    +  
Sbjct: 67 VDKLAAKADAIV 78

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 37.7 bits (86), Expect = 0.001
 Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 4/70 (5%)

Query: 6  KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          K+   V GA    G  ++R  A  G              + +   +     NV   Q  +
Sbjct: 3  KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL----KGLIAEELQAIPNVTLFQGPL 58

Query: 66 ADPAAIHSVA 75
           +   +    
Sbjct: 59 LNNVPLMDTL 68

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.5 bits (83), Expect = 0.003
 Identities = 14/78 (17%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 6  KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD 64
          +  A+VTG     G  + + L   G  +  L AR        + +L      ++ +   D
Sbjct: 1  RS-ALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIE--GDIQYEDGD 57

Query: 65 VADPAAIHSVADFIRSHF 82
          +AD  ++       +   
Sbjct: 58 MADACSVQRAVIKAQPQE 75

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 13/70 (18%), Positives = 23/70 (32%), Gaps = 3/70 (4%)

Query: 11 VTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA 69
          +TG    +G  +       GI + V      KG  + +  L   G  N  F   D+ +  
Sbjct: 5  ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIRNKN 62

Query: 70 AIHSVADFIR 79
           +  +     
Sbjct: 63 DVTRLITKYM 72

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 35.9 bits (81), Expect = 0.004
 Identities = 9/57 (15%), Positives = 19/57 (33%), Gaps = 1/57 (1%)

Query: 10 VVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV 65
          ++ G    IG  +V      G    VL   +    ++ V+ L +         +  +
Sbjct: 7  LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	290
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.97
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.82
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.81
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.79
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.77
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.75
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.75
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.72
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.72
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.72
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.71
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.71
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.68
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.67
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.65
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.64
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.64
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.61
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.61
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.6
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.43
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.4
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.34
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.3
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.28
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.2
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.11
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.99
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.07
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.04
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.0
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.96
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.93
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.91
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.85
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.79
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.75
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.74
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.73
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.69
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.53
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.51
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.45
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.42
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.41
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.4
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.34
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.27
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.27
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.24
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.24
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.23
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.19
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.16
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.12
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.1
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.09
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.06
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.04
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.03
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.02
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.98
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.96
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.95
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.95
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.91
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.89
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.87
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.83
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.82
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.81
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.8
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.78
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.78
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.72
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.68
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.66
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.63
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.62
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.58
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.53
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.47
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.44
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.38
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.38
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.37
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.37
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.31
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.25
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.14
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.14
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.11
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	96.02
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.96
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	95.93
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.92
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.79
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.78
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.77
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.72
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.72
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.67
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.48
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	95.43
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.32
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.3
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.3
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.12
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.11
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.03
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.92
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.88
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.84
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.73
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.72
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.61
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.41
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.41
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	94.25
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.92
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.53
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.53
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.5
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.16
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.12
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.06
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.62
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	92.53
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	92.52
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	92.46
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	92.37
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	92.36
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	92.35
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	92.31
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	92.29
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.04
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	91.92
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	91.86
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.72
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.55
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.53
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.43
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	91.33
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	91.3
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	91.21
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	90.86
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	90.57
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.46
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	90.36
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	90.19
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	90.18
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	90.1
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.04
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	89.97
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	89.89
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	89.86
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	89.75
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.71
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	89.64
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	89.39
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.38
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	89.37
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	89.27
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	89.24
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.09
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.93
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	88.88
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	88.85
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	88.81
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.78
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	88.76
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	88.61
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.55
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	88.41
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	88.27
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	88.26
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	87.77
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	87.4
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	87.37
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	87.35
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	87.27
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	87.23
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.17
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	87.12
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	87.05
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	86.8
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.78
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	86.62
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	86.56
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	86.37
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	86.37
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	86.35
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	86.19
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	86.1
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	86.06
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	86.03
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	86.02
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	86.0
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	85.34
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	85.24
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	85.05
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.81
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	84.46
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	84.34
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	84.09
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	84.06
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	83.55
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	83.34
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	82.24
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.18
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	81.95
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	81.8
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	81.74
d2fpoa1	183	Methylase YhhF {Escherichia coli [TaxId: 562]}	81.4
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.91
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	80.86
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	80.85
d1t35a_	179	Hypothetical protein YvdD {Bacillus subtilis [TaxI	80.7
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.5
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	80.47
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	80.36
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	80.1
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	80.09
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	80.01

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.6e-48  Score=334.89  Aligned_cols=227  Identities=26%  Similarity=0.371  Sum_probs=204.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+..+.++.+++||++++++++++++++.+++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999999999999988877666679999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |+||+||||||+....+..                +.+.++|++++++|+.++|++++.++|+|++++.|+||+++|..+
T Consensus        82 g~iDiLVnnAG~~~~~~~~----------------~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~  145 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAE----------------EFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV  145 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCChh----------------hCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchh
Confidence            9999999999987555443                349999999999999999999999999999999999999999766


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ....                                          .++..+|++||+|+++|+|+||.|+  .|||||+
T Consensus       146 ~~~~------------------------------------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~  183 (251)
T d1vl8a_         146 EEVT------------------------------------------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNV  183 (251)
T ss_dssp             TCCC------------------------------------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             cccc------------------------------------------CccccchHHHHHhHHHHHHHHHHHhcccCeEEEE
Confidence            4421                                          1456899999999999999999999  4899999


Q ss_pred             eecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|+|.+..                 +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       184 I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         184 IAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             EEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence            99999999997642                 134899999999999998889999999999886

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.6e-48  Score=333.75  Aligned_cols=227  Identities=28%  Similarity=0.306  Sum_probs=203.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      -++++|++|||||++|||+++|++|+++|++|++++|++++++++.++++..+ .++.++++|++++++++++++++.++
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g-~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFG-YESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            36889999999999999999999999999999999999999999999997655 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +|++|+||||||.....+..+.                +.++|++++++|+.++++++++++|+|++++.|+||++||..
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~----------------~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~  148 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRM----------------KNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIV  148 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTC----------------CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTH
T ss_pred             cCCceeeeeccccccccccccc----------------cHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHH
Confidence            9999999999998766555443                889999999999999999999999999999899999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+++|+|+||.|+  .|||||
T Consensus       149 ~~~~~-------------------------------------------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN  185 (251)
T d2c07a1         149 GLTGN-------------------------------------------VGQANYSSSKAGVIGFTKSLAKELASRNITVN  185 (251)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            87764                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|+|.....               ..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       186 ~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  249 (251)
T d2c07a1         186 AIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVIDGGL  249 (251)
T ss_dssp             EEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCCc
Confidence            9999999999987642               348999999999999998899999999998863

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.5e-48  Score=333.41  Aligned_cols=223  Identities=30%  Similarity=0.384  Sum_probs=203.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.    .+...+.+|++++++++++++++.+++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----ANGKGLMLNVTDPASIESVLEKIRAEF   76 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----CCCcEEEEEecCHHHhhhhhhhhhccc
Confidence            6899999999999999999999999999999999999988888877773    357889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |++|+||||||.....+..+                .+.++|++++++|+.++|+++++++|+|++++.|+||++||..+
T Consensus        77 g~iDilVnnAg~~~~~~~~~----------------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~  140 (243)
T d1q7ba_          77 GEVDILVNNAGITRDNLLMR----------------MKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG  140 (243)
T ss_dssp             CSCSEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred             CCcceehhhhhhcccccccc----------------ccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence            99999999999876655443                39999999999999999999999999999988899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++..+|++||+|+++|+|++|.|+  .|||||+
T Consensus       141 ~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~  177 (243)
T d1q7ba_         141 TMGN-------------------------------------------GGQANYAAAKAGLIGFSKSLAREVASRGITVNV  177 (243)
T ss_dssp             HHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cCCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            7764                                           567899999999999999999999  4899999


Q ss_pred             eecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|+|.+...               ..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       178 I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG~  240 (243)
T d1q7ba_         178 VAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGM  240 (243)
T ss_dssp             EEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             EecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            999999999876642               348999999999999988889999999998863

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.4e-47  Score=329.54  Aligned_cols=224  Identities=26%  Similarity=0.320  Sum_probs=204.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.    .++.+++||++++++++++++++.++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----CcceEEEeecCCHHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999999988888777764    46888999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||.....+..+.                +.++|++++++|+.++|++++.+.|+|+++..|+||++||..
T Consensus        78 ~g~idilinnAG~~~~~~~~~~----------------~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~  141 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDY----------------ALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE  141 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTS----------------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             hCCCeEEEECCcccCCCchhhC----------------CHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccc
Confidence            9999999999998766655443                899999999999999999999999999999889999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|+++|+|+++|+|++|.|+  .|||||
T Consensus       142 ~~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN  178 (244)
T d1nffa_         142 GLAGT-------------------------------------------VACHGYTATKFAVRGLTKSTALELGPSGIRVN  178 (244)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             ccccc-------------------------------------------ccccchhhHHHHHHHHHHHHHHHhcccCEEEE
Confidence            88765                                           567999999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC----------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG----------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~----------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|....+          ..+|||+|+.++||+++...+.+|+.+..+|..
T Consensus       179 ~I~PG~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG~  237 (244)
T d1nffa_         179 SIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGGT  237 (244)
T ss_dssp             EEEECCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEeeCCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCCe
Confidence            9999999999976642          359999999999999988889999999998753

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=7.6e-48  Score=334.72  Aligned_cols=225  Identities=26%  Similarity=0.339  Sum_probs=199.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++....+.++.+++||++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999974 556777777766666679999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |+||+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus        82 G~iDiLVnnAG~~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~  145 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIED----------------FPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG  145 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCcEEEeecccccCCchhh----------------hhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccc
Confidence            99999999999876554433                49999999999999999999999999999998899999999998


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+
T Consensus       146 ~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~  182 (260)
T d1x1ta1         146 LVAS-------------------------------------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANA  182 (260)
T ss_dssp             TSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEE
T ss_pred             eecc-------------------------------------------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEE
Confidence            8765                                           567899999999999999999999  4899999


Q ss_pred             eecceeecCcccCC---------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA---------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+|+|+|....                           +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       183 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         183 ICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             EEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            99999999986542                           134899999999999999889999999999886

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-47  Score=332.05  Aligned_cols=225  Identities=22%  Similarity=0.304  Sum_probs=204.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+ .++.+++||++++++++++++++.+++
T Consensus         8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g-~~~~~~~~Dvs~~~~~~~~~~~~~~~~   86 (255)
T d1fmca_           8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999999999999998765 468899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |++|+||||||+....+.                 +.+.++|++++++|+.+++++++.++|+|+++++++||++||..+
T Consensus        87 g~iDilvnnAG~~~~~~~-----------------e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~  149 (255)
T d1fmca_          87 GKVDILVNNAGGGGPKPF-----------------DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA  149 (255)
T ss_dssp             SSCCEEEECCCCCCCCCT-----------------TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEeeeCCcCCCCCcc-----------------cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccch
Confidence            999999999998654432                 238999999999999999999999999999998899999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+
T Consensus       150 ~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~  186 (255)
T d1fmca_         150 ENKN-------------------------------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNG  186 (255)
T ss_dssp             TCCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             hccc-------------------------------------------cccccchhHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            7765                                           677899999999999999999999  4899999


Q ss_pred             eecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+|+|++.+..                +..+|||+|+.++||+++...+.+|+.+..+|..
T Consensus       187 I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         187 IAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             EEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             eeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            99999999987653                1248999999999999988899999999998864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.3e-47  Score=332.69  Aligned_cols=228  Identities=22%  Similarity=0.240  Sum_probs=204.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.... +.++..++||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999999998888887654 447899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +|+||+||||||+..+....               .+.+.++|++++++|+.++|+++++++|+|+++..|+||++||..
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~---------------~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~  145 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPT---------------ESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVG  145 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCG---------------GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred             hCCCCEEEECCcccccCCch---------------hhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHh
Confidence            99999999999986432211               234899999999999999999999999999999899999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||
T Consensus       146 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN  182 (258)
T d1iy8a_         146 GIRGI-------------------------------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRIN  182 (258)
T ss_dssp             GTSBC-------------------------------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             hccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhCccCceEE
Confidence            88765                                           677999999999999999999999  489999


Q ss_pred             EeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|.+..                       +..+|||+|+.++||+++...+.+|+.+..+|..
T Consensus       183 ~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG~  254 (258)
T d1iy8a_         183 AIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQ  254 (258)
T ss_dssp             EEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred             EEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcch
Confidence            999999999985431                       1348999999999999988899999999998864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=3e-47  Score=328.43  Aligned_cols=223  Identities=25%  Similarity=0.312  Sum_probs=191.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|++.+  +..+.+++. +.++.+++||++|+++++++++++.+++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999999999999999998753  222333333 4578999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |+||+||||||+....+..                +.+.++|++++++|+.++++++++++|+|++++.|+||++||..+
T Consensus        79 G~iDilVnnAG~~~~~~~~----------------~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~  142 (247)
T d2ew8a1          79 GRCDILVNNAGIYPLIPFD----------------ELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY  142 (247)
T ss_dssp             SCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             CCCCEEEECCCCCCCCChH----------------hCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchh
Confidence            9999999999987655443                349999999999999999999999999999998899999999998


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+
T Consensus       143 ~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~  179 (247)
T d2ew8a1         143 WLKI-------------------------------------------EAYTHYISTKAANIGFTRALASDLGKDGITVNA  179 (247)
T ss_dssp             GSCC-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cccC-------------------------------------------cccccchhhhccHHHHHHHHHHHhcccCeEEEE
Confidence            7765                                           567899999999999999999999  4899999


Q ss_pred             eecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++.+..                 +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       180 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         180 IAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             EEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             EeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            99999999987552                 134899999999999998888999999998875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.1e-47  Score=330.51  Aligned_cols=226  Identities=27%  Similarity=0.311  Sum_probs=204.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      -+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+ .++.+++||++++++++++++++.++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999987765 46888999999999999999999999


Q ss_pred             cC-CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           82 FG-KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        82 ~~-~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++ ++|++|||||+....+..                +.+.++|++++++|+.++|++++.++|+|+++..|+||++||.
T Consensus        83 ~~~~idilvnnAG~~~~~~~~----------------~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  146 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYKEAK----------------DYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV  146 (259)
T ss_dssp             TTTCCCEEEECCCCCCCCCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred             hCCCceEEEECCceeccCccc----------------cCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence            87 799999999987655443                3489999999999999999999999999999999999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++|+|++|.|+  .+|||
T Consensus       147 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrV  183 (259)
T d2ae2a_         147 SGALAV-------------------------------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRV  183 (259)
T ss_dssp             GGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEE
T ss_pred             cccccc-------------------------------------------ccccchHHHHHHHHHHHHHHHHHhCcCceEE
Confidence            987765                                           667899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+|+|+|.+..                    +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             EEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            9999999999985432                    134899999999999998889999999999875

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.6e-47  Score=330.08  Aligned_cols=226  Identities=26%  Similarity=0.279  Sum_probs=188.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++...+. ++.++.||++++++++++++++.+++
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999999999999999877654 69999999999999999999999998


Q ss_pred             -CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 -GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       +++|+||||||+....+..+.                +.++|++++++|+.++|+++++++|+|++++.|+||++||..
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~----------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~  147 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDY----------------TAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA  147 (259)
T ss_dssp             TTCCSEEEEECCC------CCC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---
T ss_pred             CCCcccccccccccCCCchhhC----------------CHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc
Confidence             689999999998876655443                899999999999999999999999999998889999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||
T Consensus       148 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN  184 (259)
T d1xq1a_         148 GVVSA-------------------------------------------SVGSIYSATKGALNQLARNLACEWASDGIRAN  184 (259)
T ss_dssp             --------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             ccccc-------------------------------------------cccccccccccchhhhhHHHHHHhcccCeEEE
Confidence            87764                                           556899999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|+|.....                ..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       185 ~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDGG~  249 (259)
T d1xq1a_         185 AVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGL  249 (259)
T ss_dssp             EEECCSCC-------------------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCCE
T ss_pred             EeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcEEEeCCCE
Confidence            9999999999976531                248999999999999988899999999998863

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.8e-47  Score=330.85  Aligned_cols=223  Identities=26%  Similarity=0.315  Sum_probs=200.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++.+++||++++++++++++++.++
T Consensus         1 ndL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           1 NDLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999999988877766665    346899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +|++|+||||||+....+..+                .+.++|++++++|+.++++++++++|+|++++.|+||++||..
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~----------------~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~  140 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLET----------------ESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA  140 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGG----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG
T ss_pred             cCCccEEEecCcccccccccc----------------ccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccch
Confidence            999999999999976655443                3899999999999999999999999999998899999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+.+|+|+||.|+  .+||||
T Consensus       141 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN  177 (254)
T d1hdca_         141 GLMGL-------------------------------------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVN  177 (254)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hcccc-------------------------------------------cchhhHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence            87765                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC--------------C--CChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNAG--------------R--LTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~--------------~--~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|+|+|.....              .  ..|||+|+.++||+++...+.+|+.+..+|.
T Consensus       178 ~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG  241 (254)
T d1hdca_         178 SVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             EEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence            9999999999865421              1  2699999999999998889999999999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.8e-47  Score=328.59  Aligned_cols=228  Identities=24%  Similarity=0.314  Sum_probs=201.9

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      |. +|+||++|||||++|||+++|++|+++|++|++++|+.+ .+++..++++..+ .++.+++||++++++++++++++
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g-~~~~~~~~Dvt~~~~v~~~~~~~   79 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSA   79 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHH
Confidence            44 699999999999999999999999999999999999865 4666677776554 46899999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC-eEEEE
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA-RIVNV  157 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~-~iV~i  157 (290)
                      .+++|+||+||||||+..+.+..+                .+.++|++++++|+.++++++++++|+|++++.+ +||++
T Consensus        80 ~~~~G~iDiLVnnAG~~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~i  143 (261)
T d1geea_          80 IKEFGKLDVMINNAGLENPVSSHE----------------MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINM  143 (261)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred             HHHhCCCCEeeccceecCCcchhh----------------cCHHHHHHHHHHhcccchhHHHHHhhhhcccccccccccc
Confidence            999999999999999876655443                3999999999999999999999999999877654 69999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++..+|++||+|+.+|+|+||.|+  .|
T Consensus       144 sS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~g  180 (261)
T d1geea_         144 SSVHEKIPW-------------------------------------------PLFVHYAASKGGMKLMTETLALEYAPKG  180 (261)
T ss_dssp             CCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ccchhcccC-------------------------------------------ccccccccCCccchhhHHHHHHHhhhhC
Confidence            999987765                                           567899999999999999999999  48


Q ss_pred             eEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          236 FCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||||+|+||+|+|++....                 +..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       181 IrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG~  250 (261)
T d1geea_         181 IRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGM  250 (261)
T ss_dssp             CEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCCe
Confidence            9999999999999986542                 1348999999999999988899999999998864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.1e-46  Score=325.74  Aligned_cols=225  Identities=26%  Similarity=0.256  Sum_probs=202.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..  +.++.++.||++|+++++++++++.+++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--PDQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--TTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999999999988888887753  3468999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC-eEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA-RIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~-~iV~isS~~  161 (290)
                      |+||+||||||.....+..+.                +.++|++++++|+.++|+++++++|+|++++.| +||++||..
T Consensus        81 G~iDiLVnnAg~~~~~~~~~~----------------~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~  144 (251)
T d1zk4a1          81 GPVSTLVNNAGIAVNKSVEET----------------TTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIE  144 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTC----------------CHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGG
T ss_pred             CCceEEEeccccccccchhcc----------------cccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccc
Confidence            999999999999876655443                999999999999999999999999999988754 899999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~  237 (290)
                      +..+.                                           ++..+|++||+|+.+|+|++|.|+    .|||
T Consensus       145 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIr  181 (251)
T d1zk4a1         145 GFVGD-------------------------------------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVR  181 (251)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred             eeccC-------------------------------------------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEE
Confidence            87764                                           567899999999999999999984    3899


Q ss_pred             EEEeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|+|+|.+...                ..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       182 VN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  248 (251)
T d1zk4a1         182 VNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGY  248 (251)
T ss_dssp             EEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             EEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcCcEEEECccc
Confidence            999999999999876642                248999999999999988899999999998863

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.7e-46  Score=322.64  Aligned_cols=221  Identities=25%  Similarity=0.231  Sum_probs=197.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++      +..++.||++++++++++++++.++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~   74 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV------GAHPVVMDVADPASVERGFAEALAH   74 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------CCeEEEEecCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999988887776655      3678899999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++||+||||||+..+.+..+                .+.++|++++++|+.++++++++++|+|+++..++|+++||. 
T Consensus        75 ~g~iDilVnnAG~~~~~~~~~----------------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-  137 (242)
T d1ulsa_          75 LGRLDGVVHYAGITRDNFHWK----------------MPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-  137 (242)
T ss_dssp             HSSCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-
T ss_pred             cCCceEEEECCcccccCchhh----------------Ccchhhhccccccchhhhhhhhhccccccccccceeeeeccc-
Confidence            999999999999876555433                399999999999999999999999999999888888888875 


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+++|+|+||.|+  .|||||
T Consensus       138 ~~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN  174 (242)
T d1ulsa_         138 VYLGN-------------------------------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVN  174 (242)
T ss_dssp             GGGCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             cccCC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence            33332                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|....+               ..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       175 ~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG~  238 (242)
T d1ulsa_         175 TLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLFVDGGR  238 (242)
T ss_dssp             EEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             EEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcEEEECCCc
Confidence            9999999999988752               348999999999999998899999999998864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=7.4e-47  Score=327.89  Aligned_cols=222  Identities=28%  Similarity=0.376  Sum_probs=200.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+ .++.++++|++|+++++++++++.+++++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g-~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            8999999999999999999999999999999999999999999997665 468999999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh--ccCCCCeEEEEcCCCCc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL--QLSDSARIVNVSSSLGK  163 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l--~~~~~~~iV~isS~~g~  163 (290)
                      |+||||||+....+..+                .+.++|++++++|+.++++++++++|+|  ++++.++||++||..+.
T Consensus        81 DilVnnAG~~~~~~~~~----------------~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~  144 (257)
T d2rhca1          81 DVLVNNAGRPGGGATAE----------------LADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK  144 (257)
T ss_dssp             SEEEECCCCCCCSCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT
T ss_pred             CEEEecccccCCCChHH----------------cCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc
Confidence            99999999876554433                3999999999999999999999999974  55667899999999988


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+|
T Consensus       145 ~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I  181 (257)
T d2rhca1         145 QGV-------------------------------------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAV  181 (257)
T ss_dssp             SCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred             ccc-------------------------------------------ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEE
Confidence            765                                           667899999999999999999999  37999999


Q ss_pred             ecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+|+|+|.+..                          +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       182 ~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         182 CPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             EECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             eeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            9999999985431                          134899999999999998889999999998865

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-46  Score=323.89  Aligned_cols=219  Identities=26%  Similarity=0.304  Sum_probs=195.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++||++|||||++|||+++|++|+++|++|++++|+++.. +..+++      ...+++||++|+++++++++++.+++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~   74 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI------GGAFFQVDLEDERERVRFVEEAAYAL   74 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH------TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc------CCeEEEEeCCCHHHHHHHHHHHHHhc
Confidence            58999999999999999999999999999999999997653 344444      24678999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      |+||+||||||+..+.+..+.                +.++|++++++|+.++|+++++++|+|++++.|+||++||..+
T Consensus        75 G~iDiLVnnAG~~~~~~~~~~----------------~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          75 GRVDVLVNNAAIAAPGSALTV----------------RLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             SCCCEEEECCCCCCCBCTTTC----------------CHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             CCCCeEEEeCcCCCCCChhhC----------------CHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            999999999998866555443                8999999999999999999999999999998899999999999


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ..+.                                           ++..+|++||+|+++|+|+||.|+  .|||||+
T Consensus       139 ~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~  175 (248)
T d2d1ya1         139 LFAE-------------------------------------------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNA  175 (248)
T ss_dssp             TSBC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cccc-------------------------------------------cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEE
Confidence            8765                                           677999999999999999999999  4899999


Q ss_pred             eecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          241 VCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       241 v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+||+++|++....                     +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       176 I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         176 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  243 (248)
T ss_dssp             EEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence            99999999975321                     134899999999999998889999999999886

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=1.6e-46  Score=325.55  Aligned_cols=223  Identities=21%  Similarity=0.245  Sum_probs=199.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.+++||++++++++++++++.++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~~Dvt~~~~v~~~~~~~~~~   76 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI----GPAACAIALDVTDQASIDRCVAELLDR   76 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4599999999999999999999999999999999999998888877776    346889999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc-CCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~-~~~~~iV~isS~  160 (290)
                      +|+||+||||||+....+..+                .+.++|++++++|+.++++++++++|.|.+ +.+|+||++||.
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~  140 (256)
T d1k2wa_          77 WGSIDILVNNAALFDLAPIVE----------------ITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQ  140 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             hCCccEEEeeccccccccccc----------------CCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccch
Confidence            999999999999876555433                389999999999999999999999997654 456899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++..+|++||+|+++|+|++|.|+  .||||
T Consensus       141 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrV  177 (256)
T d1k2wa_         141 AGRRGE-------------------------------------------ALVGVYCATKAAVISLTQSAGLNLIRHGINV  177 (256)
T ss_dssp             GGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhcccc-------------------------------------------ccccchhhhhhHHHHHHHHHHHHhcccCeEE
Confidence            988765                                           667999999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|++++..                          +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       178 N~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             EEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             EEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence            9999999999985431                          134899999999999998889999999999886

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.8e-47  Score=324.10  Aligned_cols=216  Identities=28%  Similarity=0.334  Sum_probs=190.3

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+..+            .+..+++|++|+++++++++++.++
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------------~~~~~~~Dv~~~~~v~~~~~~~~~~   70 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------GLFGVEVDVTDSDAVDRAFTAVEEH   70 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------TSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc------------CceEEEEecCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999976533            4678999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+....+..+.                +.++|++++++|+.+++++++.++|+|++++.|+||++||..
T Consensus        71 ~g~iDiLVnnAG~~~~~~~~~~----------------~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~  134 (237)
T d1uzma1          71 QGPVEVLVSNAGLSADAFLMRM----------------TEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVS  134 (237)
T ss_dssp             HSSCSEEEEECSCCC-----CC----------------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             cCCceEEEeeecccccccHhhC----------------CHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchh
Confidence            9999999999998766554443                899999999999999999999999999999999999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+++|+|+||.|+  .|||||
T Consensus       135 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN  171 (237)
T d1uzma1         135 GLWGI-------------------------------------------GNQANYAASKAGVIGMARSIARELSKANVTAN  171 (237)
T ss_dssp             C------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------cccHHHHHHHHHHHHHHHHHHhhhhcCCceee
Confidence            98764                                           567899999999999999999999  589999


Q ss_pred             EeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|.+..               +..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       172 ~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG~  235 (237)
T d1uzma1         172 VVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGGM  235 (237)
T ss_dssp             EEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             eeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCCC
Confidence            999999999987653               2358999999999999998899999999998863

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.3e-46  Score=326.90  Aligned_cols=225  Identities=24%  Similarity=0.260  Sum_probs=202.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+ .++..+.||++++++++++++++.+++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999999999999999998887655 468999999999999999999999999


Q ss_pred             CCccEEEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      |++|+||||||.... .+..                +.+.++|++++++|+.++++++++++|+|+++..|+||++||..
T Consensus        81 g~iDilVnnaG~~~~~~~~~----------------~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~  144 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQ----------------DYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMA  144 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHH
T ss_pred             CCCCeehhhhccccccCccc----------------cccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechh
Confidence            999999999998643 2322                34999999999999999999999999999998899999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+++|+|+||.|+  .|||||
T Consensus       145 ~~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN  181 (260)
T d1zema1         145 GVKGP-------------------------------------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVN  181 (260)
T ss_dssp             HHSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hccCC-------------------------------------------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEE
Confidence            87764                                           677899999999999999999999  489999


Q ss_pred             EeecceeecCcccC----------------------------C---CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYN----------------------------A---GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~----------------------------~---~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+|.|+|...                            .   +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       182 ~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         182 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             EEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             EeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence            99999999997421                            0   134899999999999999889999999998873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=9.7e-46  Score=322.71  Aligned_cols=229  Identities=20%  Similarity=0.256  Sum_probs=202.2

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++...  ..+.++.||++|+++++++++++.++
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999999999988888543  35788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||.....+..              ..+.+.++|++++++|+.++++++++++|+|++++.|+||++||..
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~--------------~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~  145 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYS--------------ILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASIS  145 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSS--------------TTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGG
T ss_pred             cCCcceeccccccccCCCcc--------------cccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccc
Confidence            99999999999987544311              1234899999999999999999999999999999899999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                          ++....|++||+|+++|+|++|.|+  .|||||
T Consensus       146 ~~~~~------------------------------------------~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN  183 (268)
T d2bgka1         146 SFTAG------------------------------------------EGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN  183 (268)
T ss_dssp             GTCCC------------------------------------------TTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             ccccc------------------------------------------cccccccchhHHHHHhCHHHHHHHhChhCeEEE
Confidence            87643                                          1334689999999999999999999  489999


Q ss_pred             EeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|....                    +..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       184 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG~  252 (268)
T d2bgka1         184 CVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGY  252 (268)
T ss_dssp             EEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             ecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccCceEEECcCc
Confidence            999999999997653                    2358999999999999998899999999998863

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.9e-46  Score=323.79  Aligned_cols=223  Identities=24%  Similarity=0.328  Sum_probs=199.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|++|||||++|||+++|++|+++|++|++++|++++++++.+++...+ .++.+++||++|+++++++++++.+++|+|
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLGGF   79 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHhCCc
Confidence            5889999999999999999999999999999999999999999998765 468999999999999999999999999999


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCCCCcc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSSLGKL  164 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~~g~~  164 (290)
                      |+||||||+....+..                +.+.++|++++++|+.|+|+++++++|+|+++ .+++||++||..+..
T Consensus        80 DilVnnAG~~~~~~~~----------------~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~  143 (255)
T d1gega_          80 DVIVNNAGVAPSTPIE----------------SITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV  143 (255)
T ss_dssp             CEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             cEEEecccccccCcHH----------------Hhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc
Confidence            9999999987554443                34999999999999999999999999987665 457899999999877


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++...|++||+|+++|+|+||.|+  .|||||+|+
T Consensus       144 ~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~  180 (255)
T d1gega_         144 GN-------------------------------------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC  180 (255)
T ss_dssp             CC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             cC-------------------------------------------cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEe
Confidence            65                                           677999999999999999999999  389999999


Q ss_pred             cceeecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          243 PGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       243 PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+++|+|+...                          +..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       181 PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG~  252 (255)
T d1gega_         181 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM  252 (255)
T ss_dssp             ECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred             cCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence            999999985431                          1348999999999999988899999999998864

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=5.6e-46  Score=319.04  Aligned_cols=216  Identities=24%  Similarity=0.252  Sum_probs=195.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCe-------EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGII-------TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~-------Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +++||||||++|||+++|++|+++|++       |++.+|+.+++++..++++..+ .++.++.||++|+++++++++++
T Consensus         1 K~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g-~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           1 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG-ALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT-CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999997       9999999999999998887655 46889999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .+++|++|+||||||.....+..+                .+.++|++++++|+.|+|+++++++|+|++++.|+||++|
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~----------------~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~is  143 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSD----------------LTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFIT  143 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             HHHcCCcceeecccccccCCcccc----------------CCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEe
Confidence            999999999999999876655443                3999999999999999999999999999998889999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+.+|+|+|+.|+  .||
T Consensus       144 S~~~~~~~-------------------------------------------~~~~~Y~asK~al~~lt~~la~el~~~gI  180 (240)
T d2bd0a1         144 SVAATKAF-------------------------------------------RHSSIYCMSKFGQRGLVETMRLYARKCNV  180 (240)
T ss_dssp             CGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTE
T ss_pred             chhhcCCC-------------------------------------------CCChHHHHHHHHHHHHHHHHHHHhCcCCe
Confidence            99998765                                           677899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCCC------CCChhhhccchhhhhhccCCCCceeE
Q 039097          237 CINCVCPGYVKTEMTYNAG------RLTVEEGAESPVWLALLHKGGPSGLF  281 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~~------~~~~e~~a~~~~~l~~~~~~~~~g~~  281 (290)
                      |||+|+||+|+|+|+....      ..+|||+|+.++++++.+....+|.+
T Consensus       181 rvn~i~PG~v~T~~~~~~~~~~~~~~~~PedvA~~v~~l~s~~~~~~~~~~  231 (240)
T d2bd0a1         181 RITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQAYLQPSRTVVEEI  231 (240)
T ss_dssp             EEEEEEECCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred             EEEEeeeCcccCchhhhcCHhhHhcCCCHHHHHHHHHHHHcCCccCccCCE
Confidence            9999999999999987653      46899999999999998886666653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.2e-46  Score=322.37  Aligned_cols=223  Identities=25%  Similarity=0.338  Sum_probs=198.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEe-cCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTA-RDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .++||||||++|||+++|++|+++|++|++.+ |+++.+++..++++..+ .++.++++|++|+++++++++++.+++|+
T Consensus         1 spV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC-CcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            37999999999999999999999999999875 56666777777776654 46889999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|+||||||.....+..+                .+.++|++++++|+.++|+++++++|+|++++.|+||++||..+..
T Consensus        80 iDiLVnnAg~~~~~~~~~----------------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~  143 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIR----------------MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLI  143 (244)
T ss_dssp             CSEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHH
T ss_pred             CCccccccccccccchhc----------------cchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcC
Confidence            999999999876655443                3999999999999999999999999999998889999999999887


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      +.                                           ++..+|++||+|+.+|+|+||.|+  .|||||+|+
T Consensus       144 ~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~  180 (244)
T d1edoa_         144 GN-------------------------------------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC  180 (244)
T ss_dssp             CC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred             CC-------------------------------------------CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEe
Confidence            65                                           567899999999999999999999  489999999


Q ss_pred             cceeecCcccCCC---------------CCChhhhccchhhhh-hccCCCCceeEeecCccc
Q 039097          243 PGYVKTEMTYNAG---------------RLTVEEGAESPVWLA-LLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       243 PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~-~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+++|+|.+...               ..+|||+|+.++||+ ++...+.+|+.+..+|.-
T Consensus       181 PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdGG~  242 (244)
T d1edoa_         181 PGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTIDGGI  242 (244)
T ss_dssp             ECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTTT
T ss_pred             cceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCCCe
Confidence            9999999977642               359999999999996 666688999999998864

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-46  Score=323.12  Aligned_cols=222  Identities=27%  Similarity=0.374  Sum_probs=195.2

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++||++|||||++|||+++|++|+++|++|++++|+++.+++..+++     ..+.++.||++|+++++++++++.++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            3689999999999999999999999999999999999988877766655     24788999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++||+||||||........               .+.+.++|++++++|+.++|+++++++|+|+++ +|+||++||..
T Consensus        77 ~g~iDilVnnAG~~~~~~~~---------------~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~  140 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRP---------------EETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLV  140 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCG---------------GGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHH
T ss_pred             cCCCCEEEeccccccccccc---------------ccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCccccccc
Confidence            99999999999976433221               133899999999999999999999999999865 48999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|+++|+|+.+|+|+||.|+  .+||||
T Consensus       141 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN  177 (250)
T d1ydea1         141 GAIGQ-------------------------------------------AQAVPYVATKGAVTAMTKALALDESPYGVRVN  177 (250)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             ccccc-------------------------------------------cCcchhHHHHhhHHHHHHHHHHHhcccCeEEE
Confidence            87654                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|+|.+..                     +..+|||+|+.++||+++ ..+.+|+.+..+|..
T Consensus       178 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~itG~~i~vDGG~  246 (250)
T d1ydea1         178 CISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIELLVTGGA  246 (250)
T ss_dssp             EEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCCSCEEEESTTT
T ss_pred             EEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCcCCeEEECCCc
Confidence            999999999985431                     134899999999999986 668999999998864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4.6e-46  Score=321.99  Aligned_cols=222  Identities=26%  Similarity=0.278  Sum_probs=198.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.+..++++|++++++++++++++.++
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999998888877776    346888999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|+||||||+..+.+..+                .+.++|++++++|+.++|+++++++|+|+++ +|+||++||..
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~----------------~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~  140 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMET----------------GRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVS  140 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTT----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGG
T ss_pred             hCCCCeEEecccccCCCCccc----------------CCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchh
Confidence            999999999999876655443                3899999999999999999999999999865 59999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-C---CeE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-P---NFC  237 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~---~i~  237 (290)
                      +..+.                                           ++..+|++||+|+.+|+|++|.|+ +   +||
T Consensus       141 ~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~g~~Ir  177 (253)
T d1hxha_         141 SWLPI-------------------------------------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIR  177 (253)
T ss_dssp             GTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred             hhcCc-------------------------------------------cccccccchhHHHHHHHHHHHHHHhhcCCCEE
Confidence            87765                                           567899999999999999999998 2   599


Q ss_pred             EEEeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          238 INCVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+|+||+|+|++.+..                    +..+|||+|+.++||+++...+.+|+.+..||.
T Consensus       178 VN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             EEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             EEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            99999999999985431                    123799999999999999889999999999875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.6e-45  Score=320.67  Aligned_cols=231  Identities=27%  Similarity=0.298  Sum_probs=191.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.  .++.++++|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999977643  3689999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||...+......            ..+.+.++|++++++|+.++++++++++|+|+++. +++|+++|.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~------------~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~  148 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKT------------GTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSI  148 (264)
T ss_dssp             HHSCCCEEEECCC-------------------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCT
T ss_pred             HhCCCCEeecccccccCCccccc------------cccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeee
Confidence            99999999999998754332211            22448899999999999999999999999998775 566666665


Q ss_pred             C-CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 L-GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      . +..+.                                           ++..+|++||+|+++|+|+||.|+  .|||
T Consensus       149 ~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIr  185 (264)
T d1spxa_         149 ASGLHAT-------------------------------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIR  185 (264)
T ss_dssp             TSSSSCC-------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             ccccccC-------------------------------------------CCchhhhhhhhhHHHHHHHHHHHhcccCeE
Confidence            4 44443                                           567899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhcc-CCCCceeEeecCcccc
Q 039097          238 INCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSRKEETL  289 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~~~~~~  289 (290)
                      ||+|+||+|+|+|....                        +..+|||+|+.++||++++ ..+.+|+.+..+|...
T Consensus       186 VN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         186 VNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             EEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred             EEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence            99999999999986542                        1348999999999999865 6789999999998653

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.1e-45  Score=321.17  Aligned_cols=231  Identities=27%  Similarity=0.274  Sum_probs=199.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      +.++||++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.  .++.+++||++++++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999999999999987642  478999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                      ++++++|+||||||...+.+....            ..+.+.++|++++++|+.++++++++++|+|+++. +++|+++|
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~------------~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S  147 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTT------------GTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSS  147 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCC------------GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECC
T ss_pred             HHhCCceEEEeCCcccCccccccc------------chhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-Cccccccc
Confidence            999999999999998765543322            12447889999999999999999999999998765 45555555


Q ss_pred             -CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          160 -SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       160 -~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                       .++..+.                                           ++...|++||+|+.+|+|+||.|+  .||
T Consensus       148 s~a~~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gI  184 (272)
T d1xkqa_         148 IVAGPQAQ-------------------------------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGI  184 (272)
T ss_dssp             GGGSSSCC-------------------------------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             hhccccCC-------------------------------------------CCcchhhhHHHHHHHHHHHHHHHhcccCe
Confidence             5566554                                           567899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC------------------------CCCChhhhccchhhhhhcc-CCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALLH-KGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~~-~~~~~g~~~~~~~~~  288 (290)
                      |||+|+||+|+|+|....                        +..+|||+|+.++||+++. ..+.+|+.+..+|..
T Consensus       185 rVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~  261 (272)
T d1xkqa_         185 RVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYILGQSIVADGGT  261 (272)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             EEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCH
Confidence            999999999999986432                        1348999999999999865 468999999998864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-45  Score=315.25  Aligned_cols=229  Identities=24%  Similarity=0.284  Sum_probs=202.5

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |.+++||++|||||++|||+++|++|+++|++|++++|++++++++.++++..+ +.++.+++||++++++++++++++.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999999999999998875 3479999999999999999999999


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--CCeEEEE
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--SARIVNV  157 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~~~iV~i  157 (290)
                      +++++||+||||||...+.+..+.                +.++|++.+++|+.++|+++++++|.|+++.  +|+||++
T Consensus        85 ~~~g~iD~lVnnAg~~~~~~~~~~----------------~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~i  148 (257)
T d1xg5a_          85 SQHSGVDICINNAGLARPDTLLSG----------------STSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIINI  148 (257)
T ss_dssp             HHHCCCSEEEECCCCCCCCCTTTC----------------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred             HhcCCCCEEEecccccCCCccccc----------------cHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEE
Confidence            999999999999998876655544                9999999999999999999999999998654  6899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----  233 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----  233 (290)
                      ||.++.....                                         .+....|+++|+|+.+|+|+|+.|+    
T Consensus       149 sS~~~~~~~p-----------------------------------------~~~~~~Y~~sKaal~~ltr~la~el~~~~  187 (257)
T d1xg5a_         149 NSMSGHRVLP-----------------------------------------LSVTHFYSATKYAVTALTEGLRQELREAQ  187 (257)
T ss_dssp             CCGGGTSCCS-----------------------------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             echHhcCCCC-----------------------------------------CcccHHHHHHHHHHHhCHHHHHHHHHhCC
Confidence            9998865320                                         0345789999999999999999987    


Q ss_pred             CCeEEEEeecceeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeE-eecCc
Q 039097          234 PNFCINCVCPGYVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLF-FSRKE  286 (290)
Q Consensus       234 ~~i~vn~v~PG~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~-~~~~~  286 (290)
                      .+|+||+|+||+++|++....               +..+|||+|+.++||++++....+|++ +..+|
T Consensus       188 ~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         188 THIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             CCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTTEEEEEEEEEETT
T ss_pred             CCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhcCeECCEEEEeCC
Confidence            489999999999999986542               246899999999999999999999985 54443

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-45  Score=319.59  Aligned_cols=229  Identities=24%  Similarity=0.255  Sum_probs=201.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++||++|||||++|||+++|++|+++|++|++++|++++++++.+++...+.  .++.++.||++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999987653  3789999999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      ++|++|++|||||.....+...              .+.+.++|++++++|+.++|+++++++|+|+++.+++|+++||.
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~--------------~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~  146 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTAN--------------TDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIV  146 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCG--------------GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred             HcCCceEEEeeccccccccccc--------------ccCCHHHHHHHHhhcccccccccccccccccccccccccchhhh
Confidence            9999999999999764433221              12378999999999999999999999999999888899999988


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++..+|++||+|+.+|+|++|.|+  .||||
T Consensus       147 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrV  183 (274)
T d1xhla_         147 AGPQAH-------------------------------------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRV  183 (274)
T ss_dssp             GSSSCC-------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             hccccC-------------------------------------------CCCceehhhhhHHHHHHHHHHHHHhHhCCce
Confidence            776654                                           567899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC------------------------CCCChhhhccchhhhhhc-cCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA------------------------GRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~------------------------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+|+|++....                        +..+|||+|+.++||++. ...+.+|+.+..+|..
T Consensus       184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~  258 (274)
T d1xhla_         184 NSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGS  258 (274)
T ss_dssp             EEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred             eeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCCccccCccCcEEEeCcCH
Confidence            9999999999974331                        134899999999999984 4678999999998864

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=9.7e-45  Score=315.03  Aligned_cols=234  Identities=23%  Similarity=0.259  Sum_probs=202.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.+++||++++++++++++++.+++
T Consensus         6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL   85 (260)
T ss_dssp             CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            78999999999999999999999999999999999999999998888876666679999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc-CCCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~-~~~~~iV~isS~~  161 (290)
                      +++|+||||||+....+..+                .+.++|++++++|+.+++++++.+.|+|.+ ...++|++++|..
T Consensus        86 g~iDilVnnAg~~~~~~~~~----------------~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~  149 (260)
T d1h5qa_          86 GPISGLIANAGVSVVKPATE----------------LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMS  149 (260)
T ss_dssp             CSEEEEEECCCCCCCSCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CCCcEecccccccccCCHHH----------------hccccccccccccccchhhhhhhhcccccccccceEEEEeeccc
Confidence            99999999999876555443                499999999999999999999999999854 4557888888876


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      .........                                    ...++...|+++|+|+.+|+|+||.|+  .|||||
T Consensus       150 ~~~~~~~~~------------------------------------~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN  193 (260)
T d1h5qa_         150 SQIINQSSL------------------------------------NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVN  193 (260)
T ss_dssp             GTSCCEEET------------------------------------TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             ccccccccc------------------------------------ccCccccchhhhhhhHHHHHHHHHHHhchhCeEEe
Confidence            544321000                                    001456899999999999999999999  489999


Q ss_pred             EeecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|++.....               ..+|||+|+.++||+++...+.+|+.+..||.-
T Consensus       194 ~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  257 (260)
T d1h5qa_         194 ALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGGQ  257 (260)
T ss_dssp             EEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTTG
T ss_pred             ecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEECCCe
Confidence            9999999999977642               348999999999999988889999999988763

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.2e-44  Score=313.81  Aligned_cols=225  Identities=28%  Similarity=0.319  Sum_probs=199.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +|+||+||||||++|||+++|++|+++|++|++++|++++++++.+++...+ ..+.++.||+++.++++++++++.+++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999999999999988887666 458889999999999999999999998


Q ss_pred             -CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           83 -GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        83 -~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       +.+|+||||||.....+..+.                +.++|++++++|+.++++++++++|+|+++..|+||++||..
T Consensus        82 ~g~idilinnag~~~~~~~~~~----------------~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~  145 (258)
T d1ae1a_          82 DGKLNILVNNAGVVIHKEAKDF----------------TEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIA  145 (258)
T ss_dssp             TSCCCEEEECCCCCCCCCTTTC----------------CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGG
T ss_pred             CCCcEEEeccccccccCccccC----------------CHHHHhhhhhhccccccccccccccccccccccccccccccc
Confidence             579999999998766555443                999999999999999999999999999999999999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++...|+++|+|+++|+|.+|.|+  .+||||
T Consensus       146 ~~~~~-------------------------------------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN  182 (258)
T d1ae1a_         146 GFSAL-------------------------------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVN  182 (258)
T ss_dssp             GTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             ccccc-------------------------------------------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEE
Confidence            98765                                           677999999999999999999999  489999


Q ss_pred             EeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          240 CVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+||+++|+|.+..                     +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       183 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  251 (258)
T d1ae1a_         183 SVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  251 (258)
T ss_dssp             EEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence            999999999986653                     134999999999999998888999999998875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=317.01  Aligned_cols=264  Identities=38%  Similarity=0.602  Sum_probs=211.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++++|||||++|||+++|++|+++ |++|++++|+.++++++.++++..+. ++.++.||++|.++++++++++.+++++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGL-SPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            356799999999999999999986 89999999999999999999987764 5889999999999999999999999999


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      ||+||||||+....+..+.                +.++|+++|++|++|++++++.++|+|++  .|+||++||..+..
T Consensus        82 iDiLVnNAGi~~~~~~~~~----------------~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~  143 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTP----------------FHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVR  143 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSC----------------HHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceec
Confidence            9999999999866554433                77899999999999999999999999974  48999999988765


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC------CCeEE
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY------PNFCI  238 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~------~~i~v  238 (290)
                      +.........-+....................+..........+  +...|++||+++.+|++.++.++      .+|+|
T Consensus       144 ~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~v  221 (275)
T d1wmaa1         144 ALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGW--PSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILL  221 (275)
T ss_dssp             HHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTC--CSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEE
T ss_pred             cccccchhhhhhhcccccchhhhccccccchhcccccccccCCC--chHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            43221111111112222333334444444444444433333333  34679999999999999999887      38999


Q ss_pred             EEeecceeecCcccCCCCCChhhhccchhhhhhccC--CCCceeEeecCccccC
Q 039097          239 NCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHK--GGPSGLFFSRKEETLF  290 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~--~~~~g~~~~~~~~~~~  290 (290)
                      |+|+||+|.|+|.+.....+||++|+.+++++..+.  ..++|+|+..++...|
T Consensus       222 n~v~PG~v~T~m~~~~~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~~~~v~~w  275 (275)
T d1wmaa1         222 NACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVSEKRVEQW  275 (275)
T ss_dssp             EEEECCSBCSTTTCTTCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEETTEEECC
T ss_pred             EEEecccccCCcccCcccCCHHHHHHHHHHHHcCChhhcCCCeEEEECCEEecC
Confidence            999999999999999888999999999999986554  4579999999888877

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-44  Score=317.78  Aligned_cols=226  Identities=23%  Similarity=0.266  Sum_probs=200.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc----CCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS----GFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .|+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...    .+.++..+.||++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            489999999999999999999999999999999999999999998888653    2457999999999999999999999


Q ss_pred             HhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEc
Q 039097           79 RSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVS  158 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~is  158 (290)
                      .+.++++|+||||||.....+..+                .+.++|++++++|+.++|+++++++|+|+++..++||++|
T Consensus        89 ~~~~G~iDiLVnnAg~~~~~~~~~----------------~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~s  152 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQFLSPAEH----------------ISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNII  152 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEEC
T ss_pred             HHHhCCeEEEEeeccccccCchhh----------------hhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccc
Confidence            999999999999999876555443                3999999999999999999999999999999889999997


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |.. ....                                           ++...|++||+|+.+|+|++|.|+  .||
T Consensus       153 s~~-~~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~el~~~gI  188 (297)
T d1yxma1         153 VPT-KAGF-------------------------------------------PLAVHSGAARAGVYNLTKSLALEWACSGI  188 (297)
T ss_dssp             CCC-TTCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred             ccc-cccc-------------------------------------------cccccchhHHHHHHHHHHHHHHHhcccCc
Confidence            643 3222                                           567899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC-------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA-------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |||+|+||+|.|++....                   +..+|||+|..++||+++...+.+|+.+..+|..
T Consensus       189 rVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG~  259 (297)
T d1yxma1         189 RINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGGR  259 (297)
T ss_dssp             EEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             eEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcCh
Confidence            999999999999986432                   1348999999999999998899999999998764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-44  Score=310.79  Aligned_cols=219  Identities=25%  Similarity=0.265  Sum_probs=192.1

Q ss_pred             CC-cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            1 MA-ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         1 m~-~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      |. .|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++.     .+..+.+|++|+++++++++   
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~---   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-----GIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHT---
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHH---
Confidence            55 5899999999999999999999999999999999999888887776653     47789999999999877664   


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh-ccCCCCeEEEEc
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL-QLSDSARIVNVS  158 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l-~~~~~~~iV~is  158 (290)
                       ++++||+||||||.....+..+                .+.++|++++++|+.+++++++.++|.| ++...|+||++|
T Consensus        73 -~~g~iDilVnnAg~~~~~~~~~----------------~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~is  135 (244)
T d1pr9a_          73 -SVGPVDLLVNNAAVALLQPFLE----------------VTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVS  135 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCBCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEEC
T ss_pred             -HhCCceEEEeccccccccchhh----------------hhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecc
Confidence             5799999999999876555433                4899999999999999999999999975 455679999999


Q ss_pred             CCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCe
Q 039097          159 SSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNF  236 (290)
Q Consensus       159 S~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i  236 (290)
                      |..+..+.                                           ++...|++||+|+++|+|+||.|+  .+|
T Consensus       136 S~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~el~~~gI  172 (244)
T d1pr9a_         136 SQCSQRAV-------------------------------------------TNHSVYCSTKGALDMLTKVMALELGPHKI  172 (244)
T ss_dssp             CGGGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             cccccccc-------------------------------------------cchhhhhhhHHHHHHHHHHHHHHhCCCcE
Confidence            99987765                                           667899999999999999999999  489


Q ss_pred             EEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |||+|+||+|+|++.+..                 +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       173 rvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         173 RVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             EEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             EEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence            999999999999986553                 135899999999999999889999999998875

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.7e-44  Score=314.75  Aligned_cols=228  Identities=21%  Similarity=0.211  Sum_probs=196.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++++++..+++    +.++..+.+|++++++++++++++.++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH----GDNVLGIVGDVRSLEDQKQAASRCVAR   76 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCCeeEEecccccHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999988877766654    246899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||||+.........           ...+.+.+.|++++++|+.++++++++++|+|++++ |+||+++|..
T Consensus        77 ~g~idilvnnAG~~~~~~~~~~-----------~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~  144 (276)
T d1bdba_          77 FGKIDTLIPNAGIWDYSTALVD-----------LPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNA  144 (276)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGG-----------SCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGG
T ss_pred             hCCcccccccccccCCCCcccc-----------ccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeech
Confidence            9999999999998754432211           112335678999999999999999999999998764 8999999998


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINC  240 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~  240 (290)
                      +..+.                                           ++...|++||+|+.+|+|+||.|+ ++||||+
T Consensus       145 ~~~~~-------------------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~  181 (276)
T d1bdba_         145 GFYPN-------------------------------------------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNG  181 (276)
T ss_dssp             GTSTT-------------------------------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             hccCC-------------------------------------------CCCchHHHHHHHHHHHHHHHHHHhhcceEEcc
Confidence            87654                                           567899999999999999999999 6799999


Q ss_pred             eecceeecCcccCC-------------------------CCCChhhhccchhhhhhc-cCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNA-------------------------GRLTVEEGAESPVWLALL-HKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~-------------------------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~~~~~  288 (290)
                      |+||+|+|+|....                         +..+|||+|+.++||++. ...+.+|+.+..+|.-
T Consensus       182 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~  255 (276)
T d1bdba_         182 VGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL  255 (276)
T ss_dssp             EEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred             cCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence            99999999985431                         123899999999999984 4678999999998863

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.1e-45  Score=311.84  Aligned_cols=218  Identities=24%  Similarity=0.252  Sum_probs=190.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++||++|||||++|||+++|++|+++|++|++++|+++++++..+++.     .+..+.||++|+++++++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~----~   71 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-----GIEPVCVDLGDWDATEKALG----G   71 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-----TCEEEECCTTCHHHHHHHHT----T
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-----CCeEEEEeCCCHHHHHHHHH----H
Confidence            46999999999999999999999999999999999999888777766653     47789999999998876654    5


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhcc-CCCCeEEEEcCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQL-SDSARIVNVSSS  160 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~-~~~~~iV~isS~  160 (290)
                      ++++|+||||||+....+..                +.+.++|++++++|+.+++++++.+.|.|.+ ..+|+||++||.
T Consensus        72 ~g~iDilVnnAg~~~~~~~~----------------~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~  135 (242)
T d1cyda_          72 IGPVDLLVNNAALVIMQPFL----------------EVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM  135 (242)
T ss_dssp             CCCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             cCCCeEEEECCccccchhHH----------------HHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchh
Confidence            79999999999987655443                3499999999999999999999999998654 456899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++..+|+++|+|+.+|+|+||.|+  .||||
T Consensus       136 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrv  172 (242)
T d1cyda_         136 VAHVTF-------------------------------------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRV  172 (242)
T ss_dssp             GGTSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hccccC-------------------------------------------CccccccchHHHHHHHHHHHHHHhCccCeec
Confidence            887654                                           667899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||+++|+|.+..                 +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       173 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         173 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             EEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             ccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            9999999999986542                 235899999999999998889999999998875

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-44  Score=307.78  Aligned_cols=212  Identities=26%  Similarity=0.315  Sum_probs=191.4

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .++.||++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+ .++.++.||++|.++++++++++.++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~~   81 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKAE   81 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999999999999998655 46999999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +|++|++|||||.....+..+                .+.+.|++++++|++|+++++++++|+|++++.|+||++||..
T Consensus        82 ~g~idilinnag~~~~~~~~~----------------~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~  145 (244)
T d1yb1a_          82 IGDVSILVNNAGVVYTSDLFA----------------TQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA  145 (244)
T ss_dssp             TCCCSEEEECCCCCCCCCCGG----------------GHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             cCCCceeEeeccccccccccc----------------cchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecch
Confidence            999999999999987655443                3889999999999999999999999999999999999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-----CCe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-----PNF  236 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-----~~i  236 (290)
                      +..+.                                           ++...|++||+|+.+|+++|+.|+     .||
T Consensus       146 ~~~~~-------------------------------------------~~~~~Y~asKaal~~~~~~La~El~~~~~~gI  182 (244)
T d1yb1a_         146 GHVSV-------------------------------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGV  182 (244)
T ss_dssp             -CCCH-------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTE
T ss_pred             hcCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCE
Confidence            98775                                           567899999999999999999986     479


Q ss_pred             EEEEeecceeecCcccCC-----CCCChhhhccchhhhhhcc
Q 039097          237 CINCVCPGYVKTEMTYNA-----GRLTVEEGAESPVWLALLH  273 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----~~~~~e~~a~~~~~l~~~~  273 (290)
                      +||+|+||+|+|+|.++.     +..+||++|+.++......
T Consensus       183 ~V~~i~PG~v~T~~~~~~~~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         183 KTTCLCPNFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             EEEEEEETHHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             EEEEEEcCCCCChhhhCcCccccCCCCHHHHHHHHHHHHhcC
Confidence            999999999999998774     3568999999988765543

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-44  Score=310.80  Aligned_cols=215  Identities=28%  Similarity=0.378  Sum_probs=192.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.+++||++++++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            69999999999999999999999999999999999999999888887654 45799999999999999999999999999


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC---CCeEEEEcCC
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD---SARIVNVSSS  160 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~---~~~iV~isS~  160 (290)
                      ++|+||||||..                        ..++|++++++|+.+++++++.++|+|+++.   +|+||++||.
T Consensus        82 ~iDilVnnAg~~------------------------~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          82 RLDILVNNAGVN------------------------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             CCCEEEECCCCC------------------------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CcCeeccccccc------------------------ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            999999999986                        4567899999999999999999999998753   4789999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH--HHhhC--CCe
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI--LAKKY--PNF  236 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~--la~e~--~~i  236 (290)
                      .+..+.                                           ++..+|++||+|+.+|+|+  |+.|+  .||
T Consensus       138 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~ltrs~ala~e~~~~gI  174 (254)
T d2gdza1         138 AGLMPV-------------------------------------------AQQPVYCASKHGIVGFTRSAALAANLMNSGV  174 (254)
T ss_dssp             GGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred             hhccCC-------------------------------------------CCccchHHHHHHHHHHHHHHHHHHHhcCCCE
Confidence            988765                                           5678999999999999997  67787  489


Q ss_pred             EEEEeecceeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          237 CINCVCPGYVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       237 ~vn~v~PG~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |||+|+||+|+|+|++..                       +..+|||+|+.++||+++.  ..+|+.+..+|..
T Consensus       175 rVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~--~itG~~i~VdGG~  247 (254)
T d2gdza1         175 RLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIEDD--ALNGAIMKITTSK  247 (254)
T ss_dssp             EEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHCT--TCSSCEEEEETTT
T ss_pred             EEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHcCC--CCCCCEEEECCCC
Confidence            999999999999986552                       2358999999999999864  3899999988754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.7e-43  Score=304.84  Aligned_cols=228  Identities=21%  Similarity=0.190  Sum_probs=197.8

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHH---CCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLAL---NGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~---~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      ..|+||++|||||++|||+++|++|++   +|++|++++|+.++++++.+++...+ +.++.+++||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            368999999999999999999999996   79999999999999999999997665 44799999999999999999999


Q ss_pred             HHhh----cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC--C
Q 039097           78 IRSH----FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD--S  151 (290)
Q Consensus        78 ~~~~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~--~  151 (290)
                      +.+.    ++.+|++|||||...+.+..             .+.+.+.++|++++++|+.+++++++.++|+|++++  .
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~-------------~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~  148 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKG-------------FLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLS  148 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSC-------------GGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCE
T ss_pred             HHHhhhhccCceEEEEecccccccCCCC-------------ccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCc
Confidence            8763    45799999999987543221             122448899999999999999999999999999875  4


Q ss_pred             CeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHh
Q 039097          152 ARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAK  231 (290)
Q Consensus       152 ~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~  231 (290)
                      ++||++||..+..+.                                           ++...|++||+|+.+|+|+||.
T Consensus       149 g~Iv~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~  185 (259)
T d1oaaa_         149 KTVVNISSLCALQPY-------------------------------------------KGWGLYCAGKAARDMLYQVLAA  185 (259)
T ss_dssp             EEEEEECCGGGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccCCC-------------------------------------------ccchHHHHHHHHHHHHHHHHHh
Confidence            799999999988765                                           6779999999999999999999


Q ss_pred             hCCCeEEEEeecceeecCcccCC--------------------CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          232 KYPNFCINCVCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       232 e~~~i~vn~v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |.++||||+|+||+|.|+|.+..                    ...+|+++|+.+++++... ...+|++++..+
T Consensus       186 e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i~~ll~~~-s~~TG~~idv~d  259 (259)
T d1oaaa_         186 EEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLLGLLQKD-TFQSGAHVDFYD  259 (259)
T ss_dssp             HCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHHHHHHHC-CSCTTEEEETTC
T ss_pred             CCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhhc-cCCCCCeEEecC
Confidence            99999999999999999986431                    2458999999999999864 579999998753

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-43  Score=313.47  Aligned_cols=222  Identities=20%  Similarity=0.181  Sum_probs=193.0

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc---------cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK---------GGLEAVEKLKHSGFDNVIFHQLDVADPAAIH   72 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~---------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~   72 (290)
                      ++++||++|||||++|||+++|++|+++|++|++++|+.+         .+++..+++...    ...+.+|+++.++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~   78 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR----GGKAVANYDSVEAGE   78 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT----TCEEEEECCCGGGHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhc----ccccccccchHHHHH
Confidence            3689999999999999999999999999999999987543         344455555433    345789999999999


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCC
Q 039097           73 SVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSA  152 (290)
Q Consensus        73 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~  152 (290)
                      ++++++.+++|+||+||||||+....+..+                .+.++|++++++|+.|+|+++++++|+|++++.|
T Consensus        79 ~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~----------------~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G  142 (302)
T d1gz6a_          79 KLVKTALDTFGRIDVVVNNAGILRDRSFSR----------------ISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG  142 (302)
T ss_dssp             HHHHHHHHHTSCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHHcCCCCEEEECCccCCCCChhh----------------CCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc
Confidence            999999999999999999999986655443                4999999999999999999999999999998889


Q ss_pred             eEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhh
Q 039097          153 RIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKK  232 (290)
Q Consensus       153 ~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e  232 (290)
                      +||++||..+..+.                                           ++...|++||+|+.+|+|+|+.|
T Consensus       143 ~IV~isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~E  179 (302)
T d1gz6a_         143 RIIMTASASGIYGN-------------------------------------------FGQANYSAAKLGLLGLANTLVIE  179 (302)
T ss_dssp             EEEEECCHHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCChhhcCCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHH
Confidence            99999999987765                                           56799999999999999999999


Q ss_pred             C--CCeEEEEeecceeecCcccCCC-----CCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          233 Y--PNFCINCVCPGYVKTEMTYNAG-----RLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       233 ~--~~i~vn~v~PG~v~T~~~~~~~-----~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +  .|||||+|+||++.|++....+     ..+|||+|+.++||+++.. ..+|+.+..+|.
T Consensus       180 ~~~~gIrVN~I~PG~~~t~~~~~~~~~~~~~~~PedvA~~v~fL~S~~a-~itG~~i~vdGG  240 (302)
T d1gz6a_         180 GRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLWLCHESC-EENGGLFEVGAG  240 (302)
T ss_dssp             TGGGTEEEEEEEEECCSTTTGGGSCHHHHHHSCGGGTHHHHHHHTSTTC-CCCSCEEEEETT
T ss_pred             HhccCCceeeeCCCCCCcchhhcCcHhhHhcCCHHHHHHHHHHHcCCCc-CCCCcEEEeCCC
Confidence            9  4899999999999998766543     4689999999999998655 679999888764

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=5.6e-43  Score=302.70  Aligned_cols=216  Identities=21%  Similarity=0.241  Sum_probs=186.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCC-CHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVA-DPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~   80 (290)
                      ++++||+||||||++|||+++|++|+++|++|++++|+.++.+...+......+.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999998877655444334444558999999998 67889999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC---CCCeEEEE
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS---DSARIVNV  157 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~---~~~~iV~i  157 (290)
                      ++++||+||||||..                        +.+.|++++++|+.|+++++++++|+|.++   ..|+||++
T Consensus        81 ~~g~iDilvnnAG~~------------------------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~i  136 (254)
T d1sbya1          81 QLKTVDILINGAGIL------------------------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANI  136 (254)
T ss_dssp             HHSCCCEEEECCCCC------------------------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEE
T ss_pred             HcCCCCEEEeCCCCC------------------------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEE
Confidence            999999999999965                        678899999999999999999999999765   35899999


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      ||..+..+.                                           ++..+|++||+|+.+|+++|+.|+  .+
T Consensus       137 sS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~~t~~la~el~~~g  173 (254)
T d1sbya1         137 CSVTGFNAI-------------------------------------------HQVPVYSASKAAVVSFTNSLAKLAPITG  173 (254)
T ss_dssp             CCGGGTSCC-------------------------------------------TTSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             echhhccCC-------------------------------------------CCCHHHHHHHHHHHHHHHHHHhhccccC
Confidence            999998765                                           667899999999999999999999  48


Q ss_pred             eEEEEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          236 FCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||||+|+||+|+|+|.+.+                 +..+||++|+.+++....   ..+|+.+..++.
T Consensus       174 IrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~---~~tG~vi~vdgG  239 (254)
T d1sbya1         174 VTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---NKNGAIWKLDLG  239 (254)
T ss_dssp             EEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH---CCTTCEEEEETT
T ss_pred             eEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC---CCCCCEEEECCC
Confidence            9999999999999986543                 234789999888777653   248888877764

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-42  Score=300.33  Aligned_cols=227  Identities=19%  Similarity=0.230  Sum_probs=188.4

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +|+||++|||||+|  |||+++|++|+++|++|++++|++...++ .+++....+ ...++++|++++++++++++++.+
T Consensus         5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEALG-GALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhccC-cccccccccCCHHHHHHHHHHHHH
Confidence            68999999999986  99999999999999999999998655444 444444443 467899999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      +++++|+||||||.....+            ......+.+.++|+..+++|+.+++.+++.+.|+|++  +|+||++||.
T Consensus        83 ~~g~iDilVnnag~~~~~~------------~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~  148 (256)
T d1ulua_          83 AFGGLDYLVHAIAFAPREA------------MEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYY  148 (256)
T ss_dssp             HHSSEEEEEECCCCCCHHH------------HSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECG
T ss_pred             hcCCceEEEeccccccccc------------cccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeeh
Confidence            9999999999999864221            1122234588999999999999999999999999985  4899999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++..+|++||+|+++|+|++|.|+  .||||
T Consensus       149 ~~~~~~-------------------------------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrV  185 (256)
T d1ulua_         149 ASEKVV-------------------------------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRV  185 (256)
T ss_dssp             GGTSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             HhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhcccCCEE
Confidence            987765                                           667899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCCC-----------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNAG-----------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~~-----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+++|++....+                 ..+|||+|+.++||+++...+.+|+.+..||.-
T Consensus       186 N~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG~  252 (256)
T d1ulua_         186 NAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASGITGEVVYVDAGY  252 (256)
T ss_dssp             EEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             eeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECcCE
Confidence            99999999999876632                 348999999999999998899999999998864

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.6e-43  Score=305.95  Aligned_cols=214  Identities=17%  Similarity=0.121  Sum_probs=188.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      |+|||||++|||+++|++|+++|++|++.+|+.+++++..... .      .+..+|++++++++++++++.++||+||+
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~-~------~~~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA-E------TYPQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH-H------HCTTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh-C------cEEEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            7999999999999999999999999999999988877654332 2      23469999999999999999999999999


Q ss_pred             EEEccccCCC-CCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           88 LVNNAGITGI-SSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        88 li~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      ||||||.... .+..                +.+.++|++++++|+.++|+++++++|+|++++.|+||++||..+..+.
T Consensus        75 LVnNAg~~~~~~~~~----------------~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~  138 (252)
T d1zmta1          75 LVSNDIFAPEFQPID----------------KYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW  138 (252)
T ss_dssp             EEEECCCCCCCCCGG----------------GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC
T ss_pred             EEECCcCCCCCCChh----------------hCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc
Confidence            9999997643 2322                3489999999999999999999999999999889999999999987765


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEeecc
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVCPG  244 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~PG  244 (290)
                                                                 ++..+|++||+|+.+|+|+||.|+  .|||||+|+||
T Consensus       139 -------------------------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG  175 (252)
T d1zmta1         139 -------------------------------------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN  175 (252)
T ss_dssp             -------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEES
T ss_pred             -------------------------------------------ccccccccccccHHHHHHHHHHHhcccCcEEEEEecC
Confidence                                                       567899999999999999999999  48999999999


Q ss_pred             eeecCcccCC-----------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          245 YVKTEMTYNA-----------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       245 ~v~T~~~~~~-----------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +|+|++....                       +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       176 ~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         176 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  241 (252)
T ss_dssp             SBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            9999986553                       134999999999999999888999999999886

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=9.4e-43  Score=299.07  Aligned_cols=220  Identities=25%  Similarity=0.248  Sum_probs=190.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++    +.++.+++||++++++++++++++.+++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL----EAEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999999988776655544    3568899999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +++|++|||||.....+..+                .+.++|++++++|+.+++.+++.++|+|+++  +.|+++||.+.
T Consensus        78 g~iDiLinnAg~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~--~~i~~~ss~a~  139 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWN----------------LPLEAWEKVLRVNLTGSFLVARKAGEVLEEG--GSLVLTGSVAG  139 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT--CEEEEECCCTT
T ss_pred             CCccEeccccccccccchhh----------------hhccccccccccccccccccccccccccccc--cceeecccccc
Confidence            99999999999876655443                3999999999999999999999999998743  56777666654


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINC  240 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~  240 (290)
                      ...                                            ++...|+++|+|+++|+|+||.|+  .|||||+
T Consensus       140 ~~~--------------------------------------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~  175 (241)
T d2a4ka1         140 LGA--------------------------------------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNV  175 (241)
T ss_dssp             CCH--------------------------------------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEE
T ss_pred             ccc--------------------------------------------cCccccchhhHHHHHHHHHHHHHHhHhCCEEee
Confidence            332                                            456889999999999999999999  4799999


Q ss_pred             eecceeecCcccCCC---------------CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          241 VCPGYVKTEMTYNAG---------------RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       241 v~PG~v~T~~~~~~~---------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+||+++|++.+..+               ..+|||+|+.++||+++...+.+|+.+..+|.-
T Consensus       176 I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG~  238 (241)
T d2a4ka1         176 LLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGR  238 (241)
T ss_dssp             EEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             eccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEeCCCc
Confidence            999999999987642               349999999999999988899999999998864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.9e-43  Score=302.41  Aligned_cols=225  Identities=25%  Similarity=0.288  Sum_probs=193.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .|.||+||||||++|||+++|++|+++|++|++++|+ .+.+++..+++...+ .++.+++||++|+++++++++++.++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g-~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC-CCceEecCCCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999997655 454666677776655 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      +++||++|||||.....+..+                .+.++|++.+++|+.++++++++++|+|+++  +++++++|..
T Consensus        82 ~g~idilinnag~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~  143 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELE----------------VTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIA  143 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGG
T ss_pred             cCCCcEEEecccccccccccc----------------chHHHHHHHHhhccceeeeehhhhhhhhhcC--Cccccccccc
Confidence            999999999999876555443                3899999999999999999999999999854  6788888776


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +....                                          .++...|+++|+|+++|+|+||.|+  .+||||
T Consensus       144 ~~~~~------------------------------------------~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN  181 (259)
T d1ja9a_         144 AVMTG------------------------------------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVN  181 (259)
T ss_dssp             GTCCS------------------------------------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             ccccC------------------------------------------CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEe
Confidence            64421                                          0567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC----------------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA----------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~----------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+++|+|.+..                            +..+|+|+|+.++||+++...+.+|+.+..||..
T Consensus       182 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         182 CIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             EEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             ccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            999999999974320                            2348999999999999999999999999999864

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=8.4e-42  Score=298.29  Aligned_cols=225  Identities=24%  Similarity=0.296  Sum_probs=195.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc-ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE-KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +|+||++|||||++|||+++|++|+++|++|++++|+. +.+++..+++.+.+ .++.++++|++++++++++++++.++
T Consensus        15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g-~~~~~~~~D~~~~~~v~~~~~~~~~~   93 (272)
T d1g0oa_          15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKI   93 (272)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC-CceeeEeCCCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999998875 44566666676655 46899999999999999999999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                      ++++|++|||+|.....+..+                .+.++|++.+++|+.+++.+++.++|+|++  .+++++++|..
T Consensus        94 ~g~idilV~nag~~~~~~~~~----------------~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~  155 (272)
T d1g0oa_          94 FGKLDIVCSNSGVVSFGHVKD----------------VTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSIT  155 (272)
T ss_dssp             HSCCCEEEECCCCCCCCCGGG----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGG
T ss_pred             hCCCCccccccccchhhhhhh----------------hhhhHHHHHhhhccceeeeecccccccccc--ccccccccccc
Confidence            999999999999876555433                389999999999999999999999999985  47899998887


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +....                                          +++...|+++|+|+++|+|++|.|+  .|||||
T Consensus       156 ~~~~~------------------------------------------~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN  193 (272)
T d1g0oa_         156 GQAKA------------------------------------------VPKHAVYSGSKGAIETFARCMAIDMADKKITVN  193 (272)
T ss_dssp             GTCSS------------------------------------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             ccccc------------------------------------------ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEE
Confidence            64422                                          1566889999999999999999999  489999


Q ss_pred             EeecceeecCcccC----------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYN----------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~----------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|++.+.                            .+..+|||+|..++||+++...+.+|+.+..+|..
T Consensus       194 ~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~  270 (272)
T d1g0oa_         194 VVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA  270 (272)
T ss_dssp             EEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             EEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence            99999999997422                            12348999999999999988899999999999875

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.9e-42  Score=294.86  Aligned_cols=209  Identities=21%  Similarity=0.220  Sum_probs=180.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++    .      ...++.||+++.      ++.+.++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~----~------~~~~~~~Dv~~~------~~~~~~~~g   65 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S------GHRYVVCDLRKD------LDLLFEKVK   65 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T------CSEEEECCTTTC------HHHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh----c------CCcEEEcchHHH------HHHHHHHhC
Confidence            689999999999999999999999999999999999654332    1      245678999864      445566789


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ++|+||||||.....+..                +.+.++|++++++|+.+++++++.++|+|+++..|+||+++|..+.
T Consensus        66 ~iD~lVnnAG~~~~~~~~----------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~  129 (234)
T d1o5ia_          66 EVDILVLNAGGPKAGFFD----------------ELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVI  129 (234)
T ss_dssp             CCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred             CCcEEEecccccCCcchh----------------hhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccccc
Confidence            999999999976544433                3489999999999999999999999999999888999999998876


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEe
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCV  241 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v  241 (290)
                      .+.                                           ++...|++||+|+.+|+|++|.|+  .|||||+|
T Consensus       130 ~~~-------------------------------------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I  166 (234)
T d1o5ia_         130 SPI-------------------------------------------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV  166 (234)
T ss_dssp             SCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             ccc-------------------------------------------cccccchhHHHHHHHHHHHHHHHhcccCeEEeec
Confidence            654                                           567899999999999999999999  48999999


Q ss_pred             ecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          242 CPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       242 ~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      +||+++|++....                +..+|||+|+.++||+++...+.+|+.+..+|.
T Consensus       167 ~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         167 APGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             EECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence            9999999986542                134899999999999998889999999998875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.2e-41  Score=290.71  Aligned_cols=225  Identities=26%  Similarity=0.293  Sum_probs=190.0

Q ss_pred             cEEEEecCCCchhHHHHHHHH---HCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh--h
Q 039097            7 RYAVVTGANKGIGYEVVRQLA---LNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS--H   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~---~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~   81 (290)
                      |+||||||++|||+++|++|+   ++|++|++++|++++++++.+ +...+ .++.++.||++|+++++++++++.+  .
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNH-SNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHC-TTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcC-CcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            789999999999999999997   479999999999999887654 33333 3699999999999999999999854  6


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-----------C
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-----------D  150 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-----------~  150 (290)
                      ++++|+||||||+........               +.+.++|++++++|+.|+++++++++|+|+++           .
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~---------------~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~  145 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARIT---------------AVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG  145 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGG---------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT
T ss_pred             cCCcceEEeeccccccCcccc---------------cCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc
Confidence            789999999999875543221               33889999999999999999999999999753           3


Q ss_pred             CCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHH
Q 039097          151 SARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILA  230 (290)
Q Consensus       151 ~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la  230 (290)
                      .++||+++|..|.....                                        ..++..+|++||+|+.+|+++++
T Consensus       146 ~g~ii~i~S~~g~~~~~----------------------------------------~~~~~~~Y~aSKaal~~lt~~la  185 (248)
T d1snya_         146 RAAIINMSSILGSIQGN----------------------------------------TDGGMYAYRTSKSALNAATKSLS  185 (248)
T ss_dssp             TCEEEEECCGGGCSTTC----------------------------------------CSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccCCC----------------------------------------CCCChHHHHHHHHHHHHHHHHHH
Confidence            58999999998765321                                        01456799999999999999999


Q ss_pred             hhC--CCeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          231 KKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       231 ~e~--~~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      .|+  .+|+||+|+||+|+|+|.....+.++++.++.++..+.......+|+||.++|..
T Consensus       186 ~e~~~~gI~vn~v~PG~v~T~m~~~~~~~~~~~~~~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         186 VDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHhCCCCeEEEEcCCCcccCCcccccCCCCchHHHHHHHHHHHhcCccCCCcEEEECCeE
Confidence            999  4899999999999999999988888888888888877766666799999987753

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-42  Score=295.25  Aligned_cols=220  Identities=25%  Similarity=0.251  Sum_probs=188.2

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      |.+++||++|||||++|||+++|+.|+++|++|++++|+++++++.    .+..  .+....+|+.+.+.++++.+    
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~----~~~~--~~~~~~~d~~~~~~~~~~~~----   70 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL----EKYP--GIQTRVLDVTKKKQIDQFAN----   70 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG----GGST--TEEEEECCTTCHHHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----Hhcc--CCceeeeecccccccccccc----
Confidence            8889999999999999999999999999999999999997665443    2222  47788899988776555544    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|+||||||.....+..                +.+.++|++.+++|+.+++.+++.++|+|.++..|+||++||.
T Consensus        71 ~~~~id~lVn~ag~~~~~~~~----------------~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~  134 (245)
T d2ag5a1          71 EVERLDVLFNVAGFVHHGTVL----------------DCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSV  134 (245)
T ss_dssp             HCSCCSEEEECCCCCCCBCGG----------------GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred             ccccceeEEecccccCCCChh----------------hCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeech
Confidence            568999999999987655443                3499999999999999999999999999999989999999998


Q ss_pred             CCcc-cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          161 LGKL-MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       161 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      .+.. +.                                           ++..+|+++|+|+++|+|+||.|+  .|||
T Consensus       135 ~~~~~~~-------------------------------------------~~~~~Y~~sKaal~~l~r~lA~e~~~~gIr  171 (245)
T d2ag5a1         135 ASSVKGV-------------------------------------------VNRCVYSTTKAAVIGLTKSVAADFIQQGIR  171 (245)
T ss_dssp             BTTTBCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhccCCc-------------------------------------------cchhHHHHHHHHHHHHHHHHHHHhhhhCcE
Confidence            7753 22                                           467899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecCcccc
Q 039097          238 INCVCPGYVKTEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEETL  289 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~~  289 (290)
                      ||+|+||+|+||+....                     +..+|||+|+.+.||+++...+.+|+.+..+|.-+
T Consensus       172 vN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             EEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred             EEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCCcC
Confidence            99999999999985431                     13479999999999999888999999999988654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.1e-41  Score=290.42  Aligned_cols=228  Identities=28%  Similarity=0.349  Sum_probs=178.4

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+.|+||||||++|||+++|++|+++|+  +|++.+|+.+++++.    ++..+.++.++.||+++.++++++++++.+.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l----~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----HTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHH----HHhhCCceEEEEEecCCHHHHHHHHHHHHHH
Confidence            5679999999999999999999999996  688999998877653    3344567999999999999999999999998


Q ss_pred             cCC--ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC----------
Q 039097           82 FGK--LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS----------  149 (290)
Q Consensus        82 ~~~--id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~----------  149 (290)
                      ++.  +|+||||||+..+....               .+.+.++|++++++|+.|++++++.++|+|+++          
T Consensus        77 ~~~~~idilinnAG~~~~~~~~---------------~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~  141 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVLLSYGTN---------------TEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLS  141 (250)
T ss_dssp             HGGGCCCEEEECCCCCCCBCTT---------------SCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCC
T ss_pred             hCCCCeEEEEEcCcccCCCCcc---------------ccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCcccc
Confidence            764  99999999987542221               123889999999999999999999999999754          


Q ss_pred             -CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHH
Q 039097          150 -DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRI  228 (290)
Q Consensus       150 -~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~  228 (290)
                       ..+++++++|..+......                                    ......+..+|++||+|+.+|+++
T Consensus       142 ~~~~~~i~~s~~~~~~~~~~------------------------------------~~~~~~~~~aY~aSKaal~~l~~~  185 (250)
T d1yo6a1         142 VSRAAVITISSGLGSITDNT------------------------------------SGSAQFPVLAYRMSKAAINMFGRT  185 (250)
T ss_dssp             TTTCEEEEECCGGGCSTTCC------------------------------------STTSSSCBHHHHHHHHHHHHHHHH
T ss_pred             ceeccccccccccccccCCc------------------------------------ccccchhHHHHHHHHHHHHHHHHH
Confidence             2478999988766543210                                    000013457899999999999999


Q ss_pred             HHhhC--CCeEEEEeecceeecCcccCCCCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          229 LAKKY--PNFCINCVCPGYVKTEMTYNAGRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       229 la~e~--~~i~vn~v~PG~v~T~~~~~~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      |+.|+  .+|+||+|+||+|+|+|.......+||+.++.++..+..+....+|+||..++
T Consensus       186 la~el~~~gI~v~~i~PG~v~T~m~~~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         186 LAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHTGGGTCEEEEEECCCC-------------HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHhcccCeEEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            99999  48999999999999999998888999999999999998877778999998776

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=293.16  Aligned_cols=227  Identities=19%  Similarity=0.168  Sum_probs=196.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+.++.++.||+++.++++++++.+.+++
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            79999999999999999999999999999999999999999999998877766789999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSSSL  161 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS~~  161 (290)
                      +++|+||||||.....+...                .+.++|++.+.+|+.+.+.+.+...+.+... ..+.+++++|..
T Consensus       102 g~iDilvnnAg~~~~~~~~~----------------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~  165 (294)
T d1w6ua_         102 GHPNIVINNAAGNFISPTER----------------LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY  165 (294)
T ss_dssp             CSCSEEEECCCCCCCSCGGG----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTH
T ss_pred             cccchhhhhhhhcccccccc----------------chhhhhhhheeeecccchhhhhhhhcccccccccccccccccch
Confidence            99999999999876554433                3889999999999999999988877766544 456788888877


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEE
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCIN  239 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn  239 (290)
                      +..+.                                           ++..+|++||+|+++|+|++|.|+  .|||||
T Consensus       166 ~~~~~-------------------------------------------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN  202 (294)
T d1w6ua_         166 AETGS-------------------------------------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN  202 (294)
T ss_dssp             HHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hhhcc-------------------------------------------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence            66543                                           567899999999999999999999  489999


Q ss_pred             EeecceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          240 CVCPGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      +|+||+|+|++....                  +..+|||+|+.++||+++...+.+|+.+..+|..
T Consensus       203 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         203 VIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             EEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred             EEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCCCcEEEECCCh
Confidence            999999999986542                  2359999999999999988889999999998863

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=285.75  Aligned_cols=208  Identities=24%  Similarity=0.245  Sum_probs=171.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEE---EecCcccHHHHHHHHHh--cCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVL---TARDEKGGLEAVEKLKH--SGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~---~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +|+||||||++|||+++|++|+++|++|++   +.|+.+..++..+....  ..+.++.++.||++|.+++.++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            689999999999999999999999987554   45655444433333322  2234799999999999999999998743


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                        +++|+||||||.....+..+                .+.++|++++++|+.|+++++++++|+|++++.|+||++||.
T Consensus        82 --g~idilvnnag~~~~~~~~~----------------~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLGPLEA----------------LGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             --SCCSEEEECCCCCCCSCGGG----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             --cchhhhhhcccccccccccc----------------hhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence              79999999999876655443                389999999999999999999999999999888999999999


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .|..+.                                           ++...|++||+|+.+|+++|+.|+  .||+|
T Consensus       144 ~g~~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~El~~~gIrV  180 (285)
T d1jtva_         144 GGLMGL-------------------------------------------PFNDVYCASKFALEGLCESLAVLLLPFGVHL  180 (285)
T ss_dssp             GGTSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhcCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEE
Confidence            998765                                           667899999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC--------------------------------CCCChhhhccchhhhhhccC
Q 039097          239 NCVCPGYVKTEMTYNA--------------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~--------------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |+|+||+|+|+|....                                ...+|||+|+.+++++..++
T Consensus       181 n~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v~~~~~~~~  248 (285)
T d1jtva_         181 SLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK  248 (285)
T ss_dssp             EEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHHHHHHHCSS
T ss_pred             EEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHHhCCC
Confidence            9999999999997653                                13489999999999988765

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-38  Score=274.69  Aligned_cols=222  Identities=22%  Similarity=0.262  Sum_probs=189.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++.    .......+|+.+.+++++..+++...+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----NNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----CCccccccccccccccccccccccccc
Confidence            6899999999999999999999999999999999999999988887773    467889999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC------CCCeEEE
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS------DSARIVN  156 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~------~~~~iV~  156 (290)
                      ..+|.+++|+++.........          ....+.+.++|++++++|+.+++++++++.|+|..+      ..|+||+
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~  147 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNL----------KKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIIN  147 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEET----------TTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEE
T ss_pred             ccccccccccccccCCCcccc----------cccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEE
Confidence            999999999988764433211          122345889999999999999999999999997644      4689999


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      +||..+..+.                                           ++..+|++||+|+++|+|+||.|+  .
T Consensus       148 isS~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~e~~~~  184 (248)
T d2o23a1         148 TASVAAFEGQ-------------------------------------------VGQAAYSASKGGIVGMTLPIARDLAPI  184 (248)
T ss_dssp             ECCTHHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             ecchhhccCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhccc
Confidence            9999987654                                           667999999999999999999999  4


Q ss_pred             CeEEEEeecceeecCcccCCC----------------CCChhhhccchhhhhhccCCCCceeEee
Q 039097          235 NFCINCVCPGYVKTEMTYNAG----------------RLTVEEGAESPVWLALLHKGGPSGLFFS  283 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~~----------------~~~~e~~a~~~~~l~~~~~~~~~g~~~~  283 (290)
                      |||||+|+||+++|+|....+                ..+|||+|+.++|+.+  ..+.+|+.+.
T Consensus       185 gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s--~~~itGq~I~  247 (248)
T d2o23a1         185 GIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIE--NPFLNGEVIR  247 (248)
T ss_dssp             TEEEEEEEECCBCCC----------CHHHHTCSSSCSCBCHHHHHHHHHHHHH--CTTCCSCEEE
T ss_pred             CcceeeeccCceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CCCCCceEeE
Confidence            899999999999999976631                2389999999999986  3579999875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-39  Score=279.74  Aligned_cols=210  Identities=27%  Similarity=0.290  Sum_probs=187.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++....+..+..+.+|+++.+.+..+++++.+.+
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            38999999999999999999999999999999999999999999999888777789999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                      +.+|++|+|||.....+..+                .+.++|++++++|+.+++.+++.++|+|+++ .|+||++||.++
T Consensus        91 g~~~~li~nag~~~~~~~~~----------------~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~  153 (269)
T d1xu9a_          91 GGLDMLILNHITNTSLNLFH----------------DDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAG  153 (269)
T ss_dssp             TSCSEEEECCCCCCCCCCCC----------------SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGG
T ss_pred             CCcccccccccccccccccc----------------CCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchh
Confidence            99999999999876555443                3899999999999999999999999999854 599999999998


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCI  238 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~v  238 (290)
                      ..+.                                           ++..+|++||+|+++|+++|+.|+    .+|+|
T Consensus       154 ~~~~-------------------------------------------p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V  190 (269)
T d1xu9a_         154 KVAY-------------------------------------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSI  190 (269)
T ss_dssp             TSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             cCCC-------------------------------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEE
Confidence            8765                                           677999999999999999999998    26999


Q ss_pred             EEeecceeecCcccCC-------CCCChhhhccchhhhhhc
Q 039097          239 NCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALL  272 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~  272 (290)
                      |+|+||+|+|+|....       ...+||++|+.++.....
T Consensus       191 ~~v~PG~v~T~~~~~~~~~~~~~~~~~~e~~a~~i~~~~~~  231 (269)
T d1xu9a_         191 TLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGAL  231 (269)
T ss_dssp             EEEEECCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHHHT
T ss_pred             EEEecCcCCCcHHHHhccCCccccCCCHHHHHHHHHHHhhc
Confidence            9999999999985432       246889999888765543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=2.3e-36  Score=264.51  Aligned_cols=237  Identities=16%  Similarity=0.125  Sum_probs=184.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecC-cccHHHHHHHHHhcCCCcEEEE-----------------EeeCCCH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARD-EKGGLEAVEKLKHSGFDNVIFH-----------------QLDVADP   68 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~-~~~~~~~~~~l~~~~~~~~~~~-----------------~~Dl~~~   68 (290)
                      +++|||||++|||+++|++|+++|++|++++|+ .+..++..+++....+.....+                 .+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            689999999999999999999999999998765 4556666777766555545444                 4569999


Q ss_pred             HHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchh---
Q 039097           69 AAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL---  145 (290)
Q Consensus        69 ~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~---  145 (290)
                      ++++++++++.+++|+||+||||||...+.+..+.....+  .......+.....+..+|.+|+.+++++++.+.+.   
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGH--EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC---------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHh--hhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            9999999999999999999999999987665544311000  00001112234556778999999999999987665   


Q ss_pred             ---hccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHH
Q 039097          146 ---LQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAM  222 (290)
Q Consensus       146 ---l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~  222 (290)
                         +.+...++||+++|..+..+.                                           ++..+|++||+|+
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~-------------------------------------------~~~~~Y~asKaal  197 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPL-------------------------------------------LGYTIYTMAKGAL  197 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCC-------------------------------------------TTCHHHHHHHHHH
T ss_pred             hHHHhcCCCCcccccccccccCCc-------------------------------------------cceeeeccccccc
Confidence               344556799999998877654                                           5678999999999


Q ss_pred             HHHHHHHHhhC--CCeEEEEeecceeecCcccC----------C----CCCChhhhccchhhhhhccCCCCceeEeecCc
Q 039097          223 NAYTRILAKKY--PNFCINCVCPGYVKTEMTYN----------A----GRLTVEEGAESPVWLALLHKGGPSGLFFSRKE  286 (290)
Q Consensus       223 ~~~~~~la~e~--~~i~vn~v~PG~v~T~~~~~----------~----~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~  286 (290)
                      ++|+|++|.|+  .|||||+|+||++.+.....          .    +..+|||+|+.++||+++...+.+|+.+..+|
T Consensus       198 ~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~~~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDG  277 (284)
T d1e7wa_         198 EGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG  277 (284)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhhHHHHHHhCCccccccccccccccccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECc
Confidence            99999999999  48999999999865543211          1    13489999999999999888899999999998


Q ss_pred             cc
Q 039097          287 ET  288 (290)
Q Consensus       287 ~~  288 (290)
                      .-
T Consensus       278 G~  279 (284)
T d1e7wa_         278 GY  279 (284)
T ss_dssp             TG
T ss_pred             Ch
Confidence            64

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.6e-37  Score=263.31  Aligned_cols=209  Identities=13%  Similarity=0.070  Sum_probs=176.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG-   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-   83 (290)
                      +||++|||||++|||+++|++|+++|++|+++++++....           .....+.+|..+.++++.+.+.+.+.++ 
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------SASVIVKMTDSFTEQADQVTAEVGKLLGD   69 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------SEEEECCCCSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------cccceeecccCcHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999998765311           2356677888888898888888877654 


Q ss_pred             -CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           84 -KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        84 -~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       ++|+||||||.........               +.+.++|++++++|+.+++++++.++|+|++  +|+||++||..+
T Consensus        70 ~~iD~lInnAG~~~~~~~~~---------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~  132 (236)
T d1dhra_          70 QKVDAILCVAGGWAGGNAKS---------------KSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAA  132 (236)
T ss_dssp             CCEEEEEECCCCCCCBCTTC---------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGG
T ss_pred             CCceEEEECCcccccccchh---------------cCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHH
Confidence             6999999999754332221               2267899999999999999999999999974  589999999988


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCC----CeEE
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYP----NFCI  238 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~----~i~v  238 (290)
                      ..+.                                           ++..+|++||+|+++|+|+|+.|+.    +|||
T Consensus       133 ~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~la~El~~~~~gI~v  169 (236)
T d1dhra_         133 LDGT-------------------------------------------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA  169 (236)
T ss_dssp             GSCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEE
T ss_pred             cCCc-------------------------------------------cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEE
Confidence            7765                                           6678999999999999999999983    8999


Q ss_pred             EEeecceeecCcccCC-------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          239 NCVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      |+|+||+++|+|.+..       ...+||++|+.++++++......+|.++..
T Consensus       170 n~v~PG~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i~v  222 (236)
T d1dhra_         170 IAVLPVTLDTPMNRKSMPEADFSSWTPLEFLVETFHDWITGNKRPNSGSLIQV  222 (236)
T ss_dssp             EEEEESCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             EEEEeccCcCCcchhhCccchhhcCCCHHHHHHHHHHHhCCCccCCCCCeEEE
Confidence            9999999999996542       234789999999999998888899976654

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.1e-36  Score=257.83  Aligned_cols=228  Identities=19%  Similarity=0.171  Sum_probs=192.1

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|+||++|||||++  |||+++|++|+++|++|++++|+++..+. .+++....+ ....+.+|+++..++.++++++.+
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   79 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGR-VEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGK   79 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHH-HHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHhhcC-CcceeecccchHHHHHHHHHHhhh
Confidence            58999999999998  89999999999999999999999654444 445444332 467789999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++||||+..........           .......+.|...+.+|+.+.+.+++.+.+.++  .++.||++||.
T Consensus        80 ~~~~~d~~v~~a~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~  146 (258)
T d1qsga_          80 VWPKFDGFVHSIGFAPGDQLDGD-----------YVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYL  146 (258)
T ss_dssp             TCSSEEEEEECCCCCCGGGGSSC-----------HHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECG
T ss_pred             cccccceEEEeeccccccccccc-----------ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecch
Confidence            99999999999998653322111           111237788999999999999999999999986  34689999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      .+..+.                                           ++...|++||+|+++|+|++|.|+  .+|||
T Consensus       147 ~~~~~~-------------------------------------------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrV  183 (258)
T d1qsga_         147 GAERAI-------------------------------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRV  183 (258)
T ss_dssp             GGTSBC-------------------------------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred             hhccCC-------------------------------------------CCcHHHHHHHHHHHHHHHHHHHHhCccCcee
Confidence            877654                                           566889999999999999999999  48999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |+|+||+|+|++....                 +..+|||+|+.++||+++...+.+|+.+..||.-
T Consensus       184 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG~  250 (258)
T d1qsga_         184 NAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF  250 (258)
T ss_dssp             EEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred             ecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCccCceEEECcCH
Confidence            9999999999997763                 1458999999999999988889999999988864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.6e-36  Score=269.19  Aligned_cols=226  Identities=14%  Similarity=0.215  Sum_probs=180.7

Q ss_pred             CCcEEEEec--CCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-----------CcEEEEE---------
Q 039097            5 AKRYAVVTG--ANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-----------DNVIFHQ---------   62 (290)
Q Consensus         5 ~~k~~lITG--gs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-----------~~~~~~~---------   62 (290)
                      .+|++||||  +++|||+++|++|+++|++|+++++.................           .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  558999999999999999999999887655544333221110           1122333         


Q ss_pred             -----------eeCCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcc
Q 039097           63 -----------LDVADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTN  131 (290)
Q Consensus        63 -----------~Dl~~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vN  131 (290)
                                 +|+++.++++++++++.+++|+||+||||||......              ..+.+.+.++|++++++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~--------------~~~~~~~~~~~~~~~~vn  146 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQ--------------KDLLNTSRKGYLDALSKS  146 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTT--------------SCGGGCCHHHHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccC--------------CChhhhhhhhhhhhcccc
Confidence                       4677888999999999999999999999999764311              112244899999999999


Q ss_pred             cchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCC
Q 039097          132 YLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPAN  211 (290)
Q Consensus       132 v~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (290)
                      +++.+.++++++|+|++  +|+||++||..+..+.                                          |..
T Consensus       147 ~~~~~~~~k~~~~~m~~--~GsIv~iss~~~~~~~------------------------------------------p~y  182 (329)
T d1uh5a_         147 SYSLISLCKYFVNIMKP--QSSIISLTYHASQKVV------------------------------------------PGY  182 (329)
T ss_dssp             THHHHHHHHHHGGGEEE--EEEEEEEECGGGTSCC------------------------------------------TTC
T ss_pred             hhHHHHHHHHHHhhccc--ccccccceeehhcccc------------------------------------------ccc
Confidence            99999999999999974  5899999998877654                                          222


Q ss_pred             chhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccC-----------------------------------
Q 039097          212 AAAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYN-----------------------------------  253 (290)
Q Consensus       212 ~~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~-----------------------------------  253 (290)
                      ...|+++|+|+++|+|+||.|+ +  |||||+|+||+|+|+..+.                                   
T Consensus       183 ~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (329)
T d1uh5a_         183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEE  262 (329)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------------------------------
T ss_pred             chhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhhhhhccccccccccccccccccc
Confidence            4679999999999999999998 4  8999999999999943221                                   


Q ss_pred             -------------------------CCCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          254 -------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       254 -------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                                               .+..+|||+|..++||+++...+.+|+.+..||.-
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDGG~  322 (329)
T d1uh5a_         263 KKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDNGL  322 (329)
T ss_dssp             ---------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             hhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECCCc
Confidence                                     02359999999999999998899999999998863

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=6.5e-36  Score=255.28  Aligned_cols=208  Identities=14%  Similarity=0.073  Sum_probs=170.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh--hcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS--HFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~   83 (290)
                      +++||||||++|||+++|++|+++|++|++++|++++..           .....+.+|+.+.++.....+.+..  +++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   70 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------DSNILVDGNKNWTEQEQSILEQTASSLQGS   70 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------cccceeccccCchhHHHHHHHHHHHHhcCC
Confidence            456799999999999999999999999999999875421           2355667888888888877777776  458


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      +||+||||||.........               +.+.+.|+.++++|+.++++++++++|+|++  +|+||++||..+.
T Consensus        71 ~iD~linnAG~~~~~~~~~---------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~  133 (235)
T d1ooea_          71 QVDGVFCVAGGWAGGSASS---------------KDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAM  133 (235)
T ss_dssp             CEEEEEECCCCCCCBCTTS---------------TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGG
T ss_pred             CeeEEEECCcccccccccc---------------cCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhc
Confidence            9999999999764332211               2256889999999999999999999999974  4899999999887


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC----CCeEEE
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY----PNFCIN  239 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~----~~i~vn  239 (290)
                      .+.                                           ++..+|++||+|+++|+++|+.|+    .+|+||
T Consensus       134 ~~~-------------------------------------------~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~  170 (235)
T d1ooea_         134 GPT-------------------------------------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL  170 (235)
T ss_dssp             SCC-------------------------------------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEE
T ss_pred             CCc-------------------------------------------ccccchHHHHHHHHHHHHHHHHHhccCCCceEEE
Confidence            765                                           678999999999999999999998    389999


Q ss_pred             EeecceeecCcccCC-------CCCChhhhccchhhhhhc-cCCCCceeEeec
Q 039097          240 CVCPGYVKTEMTYNA-------GRLTVEEGAESPVWLALL-HKGGPSGLFFSR  284 (290)
Q Consensus       240 ~v~PG~v~T~~~~~~-------~~~~~e~~a~~~~~l~~~-~~~~~~g~~~~~  284 (290)
                      +|+||+++|++.+..       ...+|+++++.++.++.. .....+|+++..
T Consensus       171 ~i~Pg~~~T~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i~v  223 (235)
T d1ooea_         171 TIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTTETSSRPSSGALLKI  223 (235)
T ss_dssp             EEEESCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred             EEecCcCcCcchhhhCcCCccccCCCHHHHHHHHHHHhcCccccCCCceEEEE
Confidence            999999999986553       235889999998755544 446789988776

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1e-34  Score=251.50  Aligned_cols=234  Identities=18%  Similarity=0.212  Sum_probs=185.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCC----HHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVAD----PAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~----~~~v~~~~~~~~~~   81 (290)
                      +++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++....+.+....++|+.+    .+.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998665 4567778877776777777766644    56788888999999


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-----CCCeEEE
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-----DSARIVN  156 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-----~~~~iV~  156 (290)
                      +|++|++|||||+..+.+....     .............+.+...+.+|+.+++.+.+...+.+...     ..+.+++
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPG-----DDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVN  156 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC----------------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEE
T ss_pred             hCCCCEEEECCccCCCCccccc-----ccccchhcccccccccccccccccccccchhhhhccccccccccccccccchh
Confidence            9999999999999876554332     11122222334667788999999999999999888877543     3467888


Q ss_pred             EcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--C
Q 039097          157 VSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--P  234 (290)
Q Consensus       157 isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~  234 (290)
                      ++|..+....                                           ++...|++||+|+++++|++|.++  .
T Consensus       157 ~~~~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~e~~~~  193 (266)
T d1mxha_         157 LCDAMTDLPL-------------------------------------------PGFCVYTMAKHALGGLTRAAALELAPR  193 (266)
T ss_dssp             ECCGGGGSCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hhhccccccC-------------------------------------------cchhhhhhhHHHHhhhHHHHHHHhCcc
Confidence            8888776544                                           678999999999999999999999  4


Q ss_pred             CeEEEEeecceeecCcccCC----------C----CCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          235 NFCINCVCPGYVKTEMTYNA----------G----RLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       235 ~i~vn~v~PG~v~T~~~~~~----------~----~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      |||||+|+||+++|++....          +    ..+|||+|+.++||+++...+.+|+.+..||.-
T Consensus       194 gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~  261 (266)
T d1mxha_         194 HIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL  261 (266)
T ss_dssp             TEEEEEEEESSBSCCSSSCHHHHHHHHTTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             CcEEEEeccCcEeccccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence            89999999999999875541          1    148999999999999998889999999988863

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=2.9e-34  Score=250.05  Aligned_cols=226  Identities=17%  Similarity=0.218  Sum_probs=181.5

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|++ ++++..+++.+.++ ...+..+|++++++++++++++.+
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-~~~~~~~~l~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~   79 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKK   79 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-TTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-HHHHHHHHHHhhCC-ceeEeeecccchhhHHHHHHHHHH
Confidence            58999999999765  999999999999999999999995 45556667766654 467789999999999999999999


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      .++++|++|+|+|..........            ......+.+...+.++..+.+.+.+...+.++  .++.|+++|+.
T Consensus        80 ~~g~id~lV~nag~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~  145 (274)
T d2pd4a1          80 DLGSLDFIVHSVAFAPKEALEGS------------LLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYL  145 (274)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSC------------GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECG
T ss_pred             HcCCCCeEEeecccccccccccc------------cccccchhhhhhhccccccccccccccccccc--cCcceeeeccc
Confidence            99999999999998754322221            12335566666777777777777777766543  33456666665


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCI  238 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~v  238 (290)
                      ....+.                                           +....|+++|+|+++++|+++.|+  .||||
T Consensus       146 ~~~~~~-------------------------------------------~~~~~y~asK~al~~ltr~lA~e~~~~GIrv  182 (274)
T d2pd4a1         146 GSTKYM-------------------------------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRV  182 (274)
T ss_dssp             GGTSBC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred             cccccc-------------------------------------------ccchhhhHHHHHHHHHHHhhHHHhcCcCcee
Confidence            544432                                           456889999999999999999999  47999


Q ss_pred             EEeecceeecCcccCC-----------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          239 NCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       239 n~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      |+|+||++.|++....                 +..+|||+|+.++||+++.....+|+.+..+|.
T Consensus       183 N~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         183 NALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             EEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence            9999999999987663                 245999999999999999889999999998875

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.2e-34  Score=255.22  Aligned_cols=228  Identities=16%  Similarity=0.197  Sum_probs=178.6

Q ss_pred             cCCCcEEEEecCCC--chhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC--------C---CcEEEEEee-----
Q 039097            3 ETAKRYAVVTGANK--GIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--------F---DNVIFHQLD-----   64 (290)
Q Consensus         3 ~~~~k~~lITGgs~--gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--------~---~~~~~~~~D-----   64 (290)
                      +|+||++|||||++  |||+++|++|+++|++|++++|++..............        .   ..-....+|     
T Consensus         5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T d1d7oa_           5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccc
Confidence            79999999999875  99999999999999999999998654433332221110        0   011233333     


Q ss_pred             ---------------CCCHHHHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhh
Q 039097           65 ---------------VADPAAIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQ  129 (290)
Q Consensus        65 ---------------l~~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  129 (290)
                                     .++..+++++++++.++||+||+||||||......              ..+.+.+.++|++.++
T Consensus        85 ~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~--------------~~~~~~~~~~~~~~~~  150 (297)
T d1d7oa_          85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVS--------------KPLLETSRKGYLAAIS  150 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTT--------------SCGGGCCHHHHHHHHH
T ss_pred             cccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccc--------------cchhhhhccccccccc
Confidence                           35666788999999999999999999999753211              1122448999999999


Q ss_pred             cccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC
Q 039097          130 TNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP  209 (290)
Q Consensus       130 vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (290)
                      +|+.+++.+++++++.+.++  ++++.+++.......                                          +
T Consensus       151 vn~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~------------------------------------------~  186 (297)
T d1d7oa_         151 ASSYSFVSLLSHFLPIMNPG--GASISLTYIASERII------------------------------------------P  186 (297)
T ss_dssp             HHTHHHHHHHHHHGGGEEEE--EEEEEEECGGGTSCC------------------------------------------T
T ss_pred             chhhhhhhhhhHHHHHhhcC--Ccceeeeehhhcccc------------------------------------------c
Confidence            99999999999999998744  566777666544322                                          1


Q ss_pred             CCchhhhhhHHHHHHHHHHHHhhC-C--CeEEEEeecceeecCcccCC-----------------CCCChhhhccchhhh
Q 039097          210 ANAAAYILSKAAMNAYTRILAKKY-P--NFCINCVCPGYVKTEMTYNA-----------------GRLTVEEGAESPVWL  269 (290)
Q Consensus       210 ~~~~~Y~~sKaa~~~~~~~la~e~-~--~i~vn~v~PG~v~T~~~~~~-----------------~~~~~e~~a~~~~~l  269 (290)
                      +....|+++|+++..+++.++.++ +  +||||+|+||++.|++.+..                 +..+|||+|+.++||
T Consensus       187 ~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL  266 (297)
T d1d7oa_         187 GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFL  266 (297)
T ss_dssp             TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHH
T ss_pred             ccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            445789999999999999999998 2  89999999999999998763                 135899999999999


Q ss_pred             hhccCCCCceeEeecCccc
Q 039097          270 ALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       270 ~~~~~~~~~g~~~~~~~~~  288 (290)
                      +++...+.+|+.+..||.-
T Consensus       267 ~S~~a~~itGq~i~vDGG~  285 (297)
T d1d7oa_         267 VSPLASAITGATIYVDNGL  285 (297)
T ss_dssp             TSGGGTTCCSCEEEESTTG
T ss_pred             hCchhcCCcCceEEECcCH
Confidence            9998899999999998763

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.5e-34  Score=245.57  Aligned_cols=212  Identities=21%  Similarity=0.152  Sum_probs=176.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .|++|||||++|||+++|++|+++|++|++++|+++.             .+.....+|+++......+........ ..
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~   66 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------EDLIYVEGDVTREEDVRRAVARAQEEA-PL   66 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------SSSEEEECCTTCHHHHHHHHHHHHHHS-CE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------ccceEeeccccchhhhHHHHHhhhccc-cc
Confidence            4899999999999999999999999999999998653             246778999999999999988887764 56


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchh------hccCCCCeEEEEcC
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPL------LQLSDSARIVNVSS  159 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~------l~~~~~~~iV~isS  159 (290)
                      +.++.+++.........            .....+.+.|++++++|+.+++.+++.+.+.      |.++..|+||++||
T Consensus        67 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS  134 (241)
T d1uaya_          67 FAVVSAAGVGLAEKILG------------KEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTAS  134 (241)
T ss_dssp             EEEEECCCCCCCCCSBC------------SSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECC
T ss_pred             cchhhhhhccccccccc------------cccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecc
Confidence            66777776654322211            1123478899999999999999999999887      45556789999999


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFC  237 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~  237 (290)
                      ..+..+.                                           ++..+|+++|+|+++|+|+||.|+  .|||
T Consensus       135 ~~~~~~~-------------------------------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIr  171 (241)
T d1uaya_         135 VAAFEGQ-------------------------------------------IGQAAYAASKGGVVALTLPAARELAGWGIR  171 (241)
T ss_dssp             THHHHCC-------------------------------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             hhhccCC-------------------------------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCCc
Confidence            9887765                                           567899999999999999999999  4899


Q ss_pred             EEEeecceeecCcccCC----------------CCCChhhhccchhhhhhccCCCCceeEeecCccc
Q 039097          238 INCVCPGYVKTEMTYNA----------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEET  288 (290)
Q Consensus       238 vn~v~PG~v~T~~~~~~----------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~~  288 (290)
                      ||+|+||+|+|++....                +..+|||+|+.++||+++  .+.+|+.+..+|.-
T Consensus       172 VN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~--~~iTG~~i~VDGG~  236 (241)
T d1uaya_         172 VVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLNGEVVRLDGAL  236 (241)
T ss_dssp             EEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--TTCCSCEEEESTTC
T ss_pred             eeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC--CCCCCCEEEECCcc
Confidence            99999999999986553                123899999999999984  47999999998863

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=4.3e-33  Score=241.70  Aligned_cols=226  Identities=16%  Similarity=0.143  Sum_probs=180.9

Q ss_pred             cCCCcEEEEecC--CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGA--NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGg--s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+..+..+   ++.+..+.+...+.||+++++++.++++.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~   79 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDRLPAKAPLLELDVQNEEHLASLAGRVTE   79 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHHcCCceeeEeeecccccccccccchhhh
Confidence            589999999994  5799999999999999999999999765443   33344445678899999999999999999987


Q ss_pred             hc---CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEE
Q 039097           81 HF---GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNV  157 (290)
Q Consensus        81 ~~---~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~i  157 (290)
                      .+   +.+|++|||||+......           ....+.+.+.++|...+.+|+.+.+...+...+.+.  . +.++++
T Consensus        80 ~~~~~~~ld~~i~~ag~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~i~~  145 (268)
T d2h7ma1          80 AIGAGNKLDGVVHSIGFMPQTGM-----------GINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN--P-GGSIVG  145 (268)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGS-----------TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--E-EEEEEE
T ss_pred             ccccCCCcceeeecccccCcccc-----------ccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc--c-cccccc
Confidence            64   679999999997643221           112234558899999999999999999999988764  2 334444


Q ss_pred             cCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CC
Q 039097          158 SSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PN  235 (290)
Q Consensus       158 sS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~  235 (290)
                      +|.......                                           +....|+++|+|+.+++|+++.|+  .+
T Consensus       146 ~s~~~~~~~-------------------------------------------p~~~~y~~sK~a~~~ltr~lA~e~~~~g  182 (268)
T d2h7ma1         146 MDFDPSRAM-------------------------------------------PAYNWMTVAKSALESVNRFVAREAGKYG  182 (268)
T ss_dssp             EECCCSSCC-------------------------------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccccccccC-------------------------------------------cccchhhccccchhhccccchhhhhccC
Confidence            444443332                                           567899999999999999999999  48


Q ss_pred             eEEEEeecceeecCcccCC----------------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          236 FCINCVCPGYVKTEMTYNA----------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       236 i~vn~v~PG~v~T~~~~~~----------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||||+|+||++.|++....                            ...+|||+|+.+.||+++...+.+|+.+..|+.
T Consensus       183 IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG  262 (268)
T d2h7ma1         183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  262 (268)
T ss_dssp             CEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             CcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            9999999999999875321                            134799999999999998888999999999886


Q ss_pred             c
Q 039097          288 T  288 (290)
Q Consensus       288 ~  288 (290)
                      .
T Consensus       263 ~  263 (268)
T d2h7ma1         263 A  263 (268)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.97  E-value=2.5e-30  Score=222.68  Aligned_cols=224  Identities=19%  Similarity=0.176  Sum_probs=163.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc-CCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF-GKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~i   85 (290)
                      |+||||||++|||+++|++|+++|++|++++|+..+                  ..+|+.+.+..+....++..+. +.+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------~~~d~~~~~~~~~~~~~~~~~~~~~i   63 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------VIADLSTAEGRKQAIADVLAKCSKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------EECCTTSHHHHHHHHHHHHTTCTTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------HHHHhcCHHHHHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999999998643                  4579999999888776666554 579


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |++|+|||+..                       ..+.+.....+|..+...+.+...+.+.+.....+.++++......
T Consensus        64 d~lv~~Ag~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (257)
T d1fjha_          64 DGLVLCAGLGP-----------------------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHL  120 (257)
T ss_dssp             SEEEECCCCCT-----------------------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSS
T ss_pred             cEEEEcCCCCC-----------------------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccch
Confidence            99999999753                       3456788899999999999999999998887788888877654432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHH-HHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--CCeEEEEee
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLS-QYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--PNFCINCVC  242 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--~~i~vn~v~  242 (290)
                      .....            .......... ....+...    ..+.+++..+|++||+|+++|+|+||.|+  .|||||+|+
T Consensus       121 ~~~~~------------~~~~~~~~g~~~~i~s~~~----~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~  184 (257)
T d1fjha_         121 AFDKN------------PLALALEAGEEAKARAIVE----HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIA  184 (257)
T ss_dssp             CGGGC------------TTHHHHHHTCHHHHHHHHH----TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEE
T ss_pred             hhhhh------------hhhhhccCCcEEEEeeehh----ccCCCcchHHHHHHhhhhhccccccccccccccccccccc
Confidence            21100            0000000000 00000000    00112345789999999999999999999  589999999


Q ss_pred             cceeecCcccCC------------------CCCChhhhccchhhhhhccCCCCceeEeecCcc
Q 039097          243 PGYVKTEMTYNA------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRKEE  287 (290)
Q Consensus       243 PG~v~T~~~~~~------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~~~  287 (290)
                      ||+++|++.+..                  +..+|||+|+.++||+++...+.+|+.+..||.
T Consensus       185 PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         185 PGATETPLLQAGLQDPRYGESIAKFVPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             ECC---------------------CCCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            999999986542                  123899999999999999999999999999885

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=4.5e-30  Score=221.68  Aligned_cols=202  Identities=19%  Similarity=0.149  Sum_probs=163.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc---ccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE---KGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++|||||++|||+++|++|+++|+ +|++++|+.   +..++..+++... +.++.++.||++|.++++++++.+.+.
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~-g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT-TCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc-cccccccccccchHHHHHHhhcccccc
Confidence            67999999999999999999999999 688899874   3455666666554 357999999999999999999988665


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                       +++|.+|||+|.....+..+                .+.++|+.++++|+.+++++.+.+    +..+.++||++||..
T Consensus        88 -~~i~~vv~~ag~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a  146 (259)
T d2fr1a1          88 -VPLSAVFHAAATLDDGTVDT----------------LTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFA  146 (259)
T ss_dssp             -SCEEEEEECCCCCCCCCGGG----------------CCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHH
T ss_pred             -cccccccccccccccccccc----------------ccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchh
Confidence             58999999999886655443                389999999999999999998876    445678999999999


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      +..+.                                           ++...|+++|++++.|++.++.  .|+++++|
T Consensus       147 ~~~g~-------------------------------------------~~~~~YaAaka~l~~la~~~~~--~Gi~v~~I  181 (259)
T d2fr1a1         147 SAFGA-------------------------------------------PGLGGYAPGNAYLDGLAQQRRS--DGLPATAV  181 (259)
T ss_dssp             HHTCC-------------------------------------------TTCTTTHHHHHHHHHHHHHHHH--TTCCCEEE
T ss_pred             hccCC-------------------------------------------cccHHHHHHHHhHHHHHHHHHh--CCCCEEEC
Confidence            88765                                           6678999999999999887765  48999999


Q ss_pred             ecceeecC-cccC----------CCCCChhhhccchhhhhhccC
Q 039097          242 CPGYVKTE-MTYN----------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       242 ~PG~v~T~-~~~~----------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +||++.++ |...          ...++|+++++.+..++....
T Consensus       182 ~pg~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l~~~~  225 (259)
T d2fr1a1         182 AWGTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAE  225 (259)
T ss_dssp             EECCBC------------CTTTTEECBCHHHHHHHHHHHHHTTC
T ss_pred             CCCcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHHhCCC
Confidence            99987543 2221          135789999998887776554

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.7e-19  Score=160.22  Aligned_cols=186  Identities=16%  Similarity=0.105  Sum_probs=138.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++|||||+|.||++++++|+++|++|++++|...........+......++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            49999999999999999999999999999874433333333333223346899999999999999988863     7999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+|+.....                    .+.++.++++++|+.|+.++++++.    +.+..++|++||........
T Consensus        77 ViHlAa~~~~~--------------------~~~~~~~~~~~~Nv~gt~nlL~~~~----~~~v~~~i~~Ss~~vy~~~~  132 (338)
T d1udca_          77 VIHFAGLKAVG--------------------ESVQKPLEYYDNNVNGTLRLISAMR----AANVKNFIFSSSATVYGDQP  132 (338)
T ss_dssp             EEECCSCCCHH--------------------HHHHCHHHHHHHHHHHHHHHHHHHH----HHTCCEEEEEEEGGGGCSCC
T ss_pred             EEECCCccchh--------------------hHHhCHHHHHHhHHHHHHHHHHHHH----HhCCCEEEecCcceEEcccc
Confidence            99999964211                    1445667899999999999999994    44567899999876543321


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+..+......+...|+.+|.+.+.+++....+..++.+..+.|+.+.
T Consensus       133 ~-------------------------------~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~  181 (338)
T d1udca_         133 K-------------------------------IPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPV  181 (338)
T ss_dssp             S-------------------------------SSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEE
T ss_pred             c-------------------------------cccccccccCCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEE
Confidence            0                               000000111124578999999999999999998889999999999998


Q ss_pred             cCcccC
Q 039097          248 TEMTYN  253 (290)
Q Consensus       248 T~~~~~  253 (290)
                      ++....
T Consensus       182 G~~~~~  187 (338)
T d1udca_         182 GAHPSG  187 (338)
T ss_dssp             CCCTTS
T ss_pred             eccCCC
Confidence            875443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.8e-19  Score=160.21  Aligned_cols=186  Identities=17%  Similarity=0.123  Sum_probs=130.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHH---hcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLK---HSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .|+||||||+|.||++++++|+++|++|++++|...... ..++.+.   .....++.++++|++|.+++.+++++.   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            489999999999999999999999999999999643221 1122221   122347999999999999999999875   


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .+|++||.|+......                    +.++.+.++++|+.|+.++++++...-. ....++|++||..
T Consensus        78 --~~d~v~h~aa~~~~~~--------------------~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~  134 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVAV--------------------SFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSE  134 (357)
T ss_dssp             --CCSEEEECCCCCTTTT--------------------TTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGG
T ss_pred             --CCCEEEEeecccccch--------------------hhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchh
Confidence              7899999999864322                    3455677899999999999999854322 2345899999865


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      .+....                               ..+..+.... .+...|+.||.+.+.+++.++..+ ++.+..+
T Consensus       135 vYG~~~-------------------------------~~~~~E~~~~-~P~~~Y~~sK~~~E~~~~~~~~~~-~l~~~il  181 (357)
T d1db3a_         135 LYGLVQ-------------------------------EIPQKETTPF-YPRSPYAVAKLYAYWITVNYRESY-GMYACNG  181 (357)
T ss_dssp             GGTTCC-------------------------------SSSBCTTSCC-CCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEE
T ss_pred             hhCCCC-------------------------------CCCcCCCCCC-CCCChHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence            321110                               0000111111 234689999999999999999877 6777888


Q ss_pred             ecceeecCc
Q 039097          242 CPGYVKTEM  250 (290)
Q Consensus       242 ~PG~v~T~~  250 (290)
                      .|+.+..|.
T Consensus       182 R~~~vyGp~  190 (357)
T d1db3a_         182 ILFNHESPR  190 (357)
T ss_dssp             EECCEECTT
T ss_pred             EeccccCCC
Confidence            887777763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=4.1e-21  Score=157.75  Aligned_cols=116  Identities=15%  Similarity=0.038  Sum_probs=97.1

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+++||+++||||+||||+++|++|+++|++|++++|+.+++++..+++....  .+.+..+|+++.+++++++      
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF--KVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH--TCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc--chhhhhhhcccHHHHHHHh------
Confidence            37899999999999999999999999999999999999999998888886544  3566889999999887765      


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhh
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLL  146 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l  146 (290)
                       +++|+||||||....                    ..+.+.|++.+++|+.+.++....+.+.+
T Consensus        91 -~~iDilin~Ag~g~~--------------------~~~~e~~~~~~~~nv~~~~~~~~~~~~~~  134 (191)
T d1luaa1          91 -KGAHFVFTAGAIGLE--------------------LLPQAAWQNESSIEIVADYNAQPPLGIGG  134 (191)
T ss_dssp             -TTCSEEEECCCTTCC--------------------CBCHHHHHTCTTCCEEEECCCSSSCSBTT
T ss_pred             -cCcCeeeecCccccc--------------------cCCHHHHHhhhcceeehhHhhHHHHHHHh
Confidence             479999999996321                    12889999999999999887765554433

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.79  E-value=1.5e-18  Score=154.47  Aligned_cols=188  Identities=18%  Similarity=0.146  Sum_probs=133.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      .|+||||||+|.||++++++|+++|++|+++++...................+.++.+|++|.++++++++..     ++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            3789999999999999999999999999999865433222222222222346889999999999999988753     79


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+|+.....                    ...+....++.+|+.++.++++++    ++....++|++||...+..
T Consensus        76 d~VihlAa~~~~~--------------------~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~  131 (347)
T d1z45a2          76 DSVIHFAGLKAVG--------------------ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGD  131 (347)
T ss_dssp             CEEEECCSCCCHH--------------------HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCC
T ss_pred             CEEEEcccccccc--------------------ccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecC
Confidence            9999999975311                    133455678899999999999999    4445579999999875532


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEeecc
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCVCPG  244 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v~PG  244 (290)
                      ....                           ....+..+. ....+...|+.||.+.+.+++.+.... .++.+..+.|+
T Consensus       132 ~~~~---------------------------~~~~~~~e~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~  183 (347)
T d1z45a2         132 ATRF---------------------------PNMIPIPEE-CPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYF  183 (347)
T ss_dssp             GGGS---------------------------TTCCSBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEEC
T ss_pred             cccC---------------------------CCCCccccc-cCCCCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeec
Confidence            2100                           000000000 001234689999999999999998765 57888888887


Q ss_pred             eeecCc
Q 039097          245 YVKTEM  250 (290)
Q Consensus       245 ~v~T~~  250 (290)
                      .+..+.
T Consensus       184 ~v~g~~  189 (347)
T d1z45a2         184 NPIGAH  189 (347)
T ss_dssp             EEECCC
T ss_pred             ceEeec
Confidence            777654

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.77  E-value=1.7e-18  Score=154.07  Aligned_cols=202  Identities=19%  Similarity=0.172  Sum_probs=137.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ..||+||||||+|.||+++++.|+++|++|+.+.|+..+............ ......+..|+++.+++.+++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            358999999999999999999999999999999999766554433332222 2334567789999988776654      


Q ss_pred             CCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCC
Q 039097           83 GKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLG  162 (290)
Q Consensus        83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g  162 (290)
                       .+|+++|+|+....                       .......+.+|+.++.++++.+...   ....++|++||..+
T Consensus        83 -~~~~v~~~a~~~~~-----------------------~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~  135 (342)
T d1y1pa1          83 -GAAGVAHIASVVSF-----------------------SNKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVS  135 (342)
T ss_dssp             -TCSEEEECCCCCSC-----------------------CSCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGG
T ss_pred             -cchhhhhhcccccc-----------------------cccccccccchhhhHHHHHHhhhcc---ccccccccccccee
Confidence             68999999997531                       1223456788999999999998431   24579999999765


Q ss_pred             cccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC-CCeEEEEe
Q 039097          163 KLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY-PNFCINCV  241 (290)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~-~~i~vn~v  241 (290)
                      .......  ....+.+...++.........     ....     ....+...|+.+|.+.+.+++.+++.+ .++++..+
T Consensus       136 ~~~~~~~--~~~~~~~e~~~~~~~~~~~~~-----~~e~-----~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i  203 (342)
T d1y1pa1         136 ALIPKPN--VEGIYLDEKSWNLESIDKAKT-----LPES-----DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAV  203 (342)
T ss_dssp             TCCCCTT--CCCCEECTTCCCHHHHHHHHH-----SCTT-----STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEE
T ss_pred             eccCCCC--CCCcccccccccccccccccc-----cccc-----CCCCCcCcccchhHhHHHHHHHhhhhccccccccee
Confidence            4322100  011122222222222222110     0000     001245789999999999999998877 57888899


Q ss_pred             ecceeecCc
Q 039097          242 CPGYVKTEM  250 (290)
Q Consensus       242 ~PG~v~T~~  250 (290)
                      .|+.+..|.
T Consensus       204 ~p~~v~Gp~  212 (342)
T d1y1pa1         204 LPNYTIGTI  212 (342)
T ss_dssp             EESEEECCC
T ss_pred             cccceeCCC
Confidence            999887764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=1.2e-17  Score=150.93  Aligned_cols=198  Identities=11%  Similarity=0.004  Sum_probs=130.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC----------------cccHHHHHHHHHhcCCCcEEEEEeeCCCHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARD----------------EKGGLEAVEKLKHSGFDNVIFHQLDVADPA   69 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   69 (290)
                      |++||||||+|.||.+++++|+++|+.|+++|..                .....+.........+.++.++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            7899999999999999999999999999998621                112233333333333456999999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      .++++++..     ++|+|||.|+.......                 ..+.+....++.+|+.|+.++++.+...   .
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~~~s-----------------~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~  135 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSAPYS-----------------MIDRSRAVYTQHNNVIGTLNVLFAIKEF---G  135 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCHHHH-----------------TSCHHHHHHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHhh-----cchheeccccccccccc-----------------cccccccccccccccccccHHHHHHHHh---c
Confidence            999999875     79999999997532110                 1145667788999999999999998432   2


Q ss_pred             CCCeEEEEcCCCCcccccchhhh--hcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWA--KGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTR  227 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~  227 (290)
                      ...++++.||.............  .....+.                .....+.     ...+...|+.+|.+.+.+++
T Consensus       136 ~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~-----~~~p~~~Y~~sK~~aE~~~~  194 (393)
T d1i24a_         136 EECHLVKLGTMGEYGTPNIDIEEGYITITHNG----------------RTDTLPY-----PKQASSFYHLSKVHDSHNIA  194 (393)
T ss_dssp             TTCEEEEECCGGGGCCCSSCBCSSEEEEEETT----------------EEEEEEC-----CCCCCSHHHHHHHHHHHHHH
T ss_pred             cccceeeccccccccccccccccccccccccc----------------ccccccc-----ccccccHHHHHhhhhccccc
Confidence            23456666665433211000000  0000000                0000000     01234679999999999999


Q ss_pred             HHHhhCCCeEEEEeecceeecCc
Q 039097          228 ILAKKYPNFCINCVCPGYVKTEM  250 (290)
Q Consensus       228 ~la~e~~~i~vn~v~PG~v~T~~  250 (290)
                      .++.++ ++.+..+.|+.+..+-
T Consensus       195 ~~~~~~-~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         195 FTCKAW-GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             HHHHHH-CCEEEEEEECEEECSC
T ss_pred             cccccc-ceeeeecccccccCCC
Confidence            887766 7888888888777653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.3e-17  Score=147.96  Aligned_cols=184  Identities=15%  Similarity=0.033  Sum_probs=126.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-----HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-----GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |+||||||+|.||++++++|+++|++|+.++|....     ++............++.++.+|++|.+.+.+++++.   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            455999999999999999999999999999996532     122111222222346899999999999999999875   


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSL  161 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~  161 (290)
                        .+++++|.|+.....                    .+.+.....+++|+.++.++++++..+-. ....++|++||.+
T Consensus        79 --~~~~v~~~~a~~~~~--------------------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~  135 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVK--------------------ISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSE  135 (347)
T ss_dssp             --CCSEEEECCSCCCHH--------------------HHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGG
T ss_pred             --ccceeeeeeeccccc--------------------hhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchh
Confidence              789999999865321                    13455667789999999999998855432 1235899999865


Q ss_pred             CcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Q 039097          162 GKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCV  241 (290)
Q Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v  241 (290)
                      .+...             ..                  .+..+.. ...+...|+.||.+.+.+++.++..+ ++.+..+
T Consensus       136 vyg~~-------------~~------------------~~~~E~~-~~~P~~~Yg~sK~~aE~~~~~~~~~~-~~~~~il  182 (347)
T d1t2aa_         136 LYGKV-------------QE------------------IPQKETT-PFYPRSPYGAAKLYAYWIVVNFREAY-NLFAVNG  182 (347)
T ss_dssp             GTCSC-------------SS------------------SSBCTTS-CCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEE
T ss_pred             eecCC-------------CC------------------CCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEE
Confidence            43211             00                  0000000 01235679999999999999988776 6666667


Q ss_pred             ecceeecC
Q 039097          242 CPGYVKTE  249 (290)
Q Consensus       242 ~PG~v~T~  249 (290)
                      .|+.+..|
T Consensus       183 r~~~vyGp  190 (347)
T d1t2aa_         183 ILFNHESP  190 (347)
T ss_dssp             EECCEECT
T ss_pred             EecceeCC
Confidence            77666665

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.9e-17  Score=147.09  Aligned_cols=184  Identities=16%  Similarity=0.110  Sum_probs=133.8

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEec------CcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTAR------DEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r------~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .|+||||||+|.||++++++|+++|++|++++|      +.....+..+.+......++.++.+|++|.+.+.+++..  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc--
Confidence            378899999999999999999999999999874      222223333444333345789999999999999988876  


Q ss_pred             hhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcC
Q 039097           80 SHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSS  159 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS  159 (290)
                         ..+++++|.|+.....                    .+.++..+++++|+.++.++++++    ++.+..+++++||
T Consensus        80 ---~~~~~i~h~Aa~~~~~--------------------~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss  132 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKAVG--------------------ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSS  132 (346)
T ss_dssp             ---CCEEEEEECCSCCCHH--------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEE
T ss_pred             ---cccccccccccccCcH--------------------hhHhCHHHHHHhhhcccccccchh----hhcCccccccccc
Confidence               3789999999975321                    134556788999999999999988    5556678999988


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ..........                              ... ...........|+.+|.+.+...+.++....++...
T Consensus       133 ~~~~~~~~~~------------------------------~~~-~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~  181 (346)
T d1ek6a_         133 ATVYGNPQYL------------------------------PLD-EAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV  181 (346)
T ss_dssp             GGGGCSCSSS------------------------------SBC-TTSCCCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred             ceeeeccccc------------------------------ccc-ccccccccCChHHHHHHHHHHHHHHHHHhccCCceE
Confidence            7654432110                              000 000111234679999999999999998877777777


Q ss_pred             EeecceeecC
Q 039097          240 CVCPGYVKTE  249 (290)
Q Consensus       240 ~v~PG~v~T~  249 (290)
                      .+.|+.+.++
T Consensus       182 ~lR~~~v~G~  191 (346)
T d1ek6a_         182 LLRYFNPTGA  191 (346)
T ss_dssp             EEEECEEECC
T ss_pred             EEeecceecc
Confidence            7777776665

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=7.3e-17  Score=143.04  Aligned_cols=182  Identities=15%  Similarity=0.100  Sum_probs=131.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc----CCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS----GFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +-|++|||||+|.||++++++|.++|++|+.++|.........+.+...    ....+.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            4589999999999999999999999999999987544333333333221    12368999999999887665544    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                         ..+.++|.++.....                    .+.++....+++|+.|+.++++++    ++.+..++|++||.
T Consensus        91 ---~~~~v~~~~a~~~~~--------------------~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~  143 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSVP--------------------RSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASS  143 (341)
T ss_dssp             ---TCSEEEECCSCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEG
T ss_pred             ---ccccccccccccccc--------------------ccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccc
Confidence               689999998865311                    155777889999999999999999    44555799999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+.....                               .+..+ +....+...|+.+|.+.+.+++.++... ++++..
T Consensus       144 ~vyg~~~~-------------------------------~~~~E-~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i  190 (341)
T d1sb8a_         144 STYGDHPG-------------------------------LPKVE-DTIGKPLSPYAVTKYVNELYADVFSRCY-GFSTIG  190 (341)
T ss_dssp             GGGTTCCC-------------------------------SSBCT-TCCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCCEE
T ss_pred             eeeCCCCC-------------------------------CCccC-CCCCCCCCcchHHHHHHHHHHHHHHHHh-CCCeEE
Confidence            75432100                               00000 0111245789999999999999988766 677778


Q ss_pred             eecceeecCc
Q 039097          241 VCPGYVKTEM  250 (290)
Q Consensus       241 v~PG~v~T~~  250 (290)
                      +.|+.+.++.
T Consensus       191 lR~~~v~G~~  200 (341)
T d1sb8a_         191 LRYFNVFGRR  200 (341)
T ss_dssp             EEECCEECTT
T ss_pred             EEeceeeccC
Confidence            8887777654

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.72  E-value=2.6e-17  Score=147.48  Aligned_cols=217  Identities=18%  Similarity=0.135  Sum_probs=145.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +||||||+|.||++++++|+++|++|++. ++......  .+.+... ...++.++.+|++|.+.+.++++..     ++
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~   74 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN--LESLSDISESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcccc--HHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CC
Confidence            58999999999999999999999975554 43321111  1112221 2347999999999999999988864     79


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-----CCCeEEEEcCC
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-----DSARIVNVSSS  160 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-----~~~~iV~isS~  160 (290)
                      |+|||+|+.....                    .+.++..+++++|+.++.++++.+.......     ...++|++||.
T Consensus        75 d~VihlAa~~~~~--------------------~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~  134 (361)
T d1kewa_          75 DAVMHLAAESHVD--------------------RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD  134 (361)
T ss_dssp             SEEEECCSCCCHH--------------------HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEG
T ss_pred             CEEEECccccchh--------------------hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccc
Confidence            9999999975311                    1345567789999999999999997654432     23689999997


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+.............                      ..+.........+...|+.||.+.+.+++.++..+ ++.+..
T Consensus       135 ~vyg~~~~~~~~~~~~----------------------~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~-~i~~~~  191 (361)
T d1kewa_         135 EVYGDLPHPDEVENSV----------------------TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY-GLPTIV  191 (361)
T ss_dssp             GGGCCCCCGGGSCTTS----------------------CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred             eeeCCCccCCcccccc----------------------CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEE
Confidence            6543221100000000                      00000001111245779999999999999999877 888888


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.|+.+..|.....                          .....+|+++.++.++....
T Consensus       192 lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~  251 (361)
T d1kewa_         192 TNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK  251 (361)
T ss_dssp             EEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             EecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC
Confidence            88888888754321                          02366788887777665443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.72  E-value=4.7e-17  Score=143.71  Aligned_cols=186  Identities=18%  Similarity=0.065  Sum_probs=130.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc-----cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK-----GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +|++|||||+|.||++++++|+++|++|+.++|...     +...............+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            589999999999999999999999999999998543     2211111111222346889999999999999988864  


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSS  159 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS  159 (290)
                         ++|+|||.|+.....                    .+.+.....+.+|+.+...++.++.....+. ...+++..||
T Consensus        79 ---~~D~Vih~Aa~~~~~--------------------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss  135 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA--------------------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGS  135 (339)
T ss_dssp             ---CCSEEEECCSCCCHH--------------------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEE
T ss_pred             ---ccchhhhcccccccc--------------------ccccCccccccccccccchhhhhhhhcccccccceeeeeccc
Confidence               899999999975321                    1345667889999999999998886544332 2345666655


Q ss_pred             CCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEE
Q 039097          160 SLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCIN  239 (290)
Q Consensus       160 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn  239 (290)
                      ........                                .+..+. ....+...|+.+|.+.+.+++.+...+ ++.+.
T Consensus       136 ~~~~~~~~--------------------------------~~~~E~-~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~  181 (339)
T d1n7ha_         136 SEMFGSTP--------------------------------PPQSET-TPFHPRSPYAASKCAAHWYTVNYREAY-GLFAC  181 (339)
T ss_dssp             GGGGTTSC--------------------------------SSBCTT-SCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEE
T ss_pred             ceecccCC--------------------------------CCCCCC-CCCCCcchhhHHHHHHHHHHHHHHHHh-CCCEE
Confidence            43222110                                000000 001246789999999999999888776 68888


Q ss_pred             EeecceeecCc
Q 039097          240 CVCPGYVKTEM  250 (290)
Q Consensus       240 ~v~PG~v~T~~  250 (290)
                      .+.|+.+..|.
T Consensus       182 ilR~~~vyGp~  192 (339)
T d1n7ha_         182 NGILFNHESPR  192 (339)
T ss_dssp             EEEECCEECTT
T ss_pred             EEEEccccCCC
Confidence            88888887764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.71  E-value=8.1e-17  Score=140.90  Aligned_cols=170  Identities=16%  Similarity=0.168  Sum_probs=125.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+|+||||||+|.||++++++|+++|+.|+++++..                     .+|+++.+.+.++++.     ..
T Consensus         1 ~kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------~~~~~~~~~~~~~~~~-----~~   54 (315)
T d1e6ua_           1 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------ELNLLDSRAVHDFFAS-----ER   54 (315)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------TCCTTCHHHHHHHHHH-----HC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------hccccCHHHHHHHHhh-----cC
Confidence            368899999999999999999999999988876542                     1689999999888774     27


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|.++|.|+......                   .......+.+++|+.++.++++++    ++.+..++|++||.+.+.
T Consensus        55 ~d~v~~~a~~~~~~~-------------------~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg  111 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIV-------------------ANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYP  111 (315)
T ss_dssp             CSEEEECCCCCCCHH-------------------HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSC
T ss_pred             CCEEEEcchhccccc-------------------cchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcC
Confidence            999999997653211                   134556677889999999999998    444567899999987654


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      .....         +                  ..+..+.....-+....|+.||.+.+.+++.+..+. ++++..+.|+
T Consensus       112 ~~~~~---------~------------------~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-gl~~~ilR~~  163 (315)
T d1e6ua_         112 KLAKQ---------P------------------MAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY-GRDYRSVMPT  163 (315)
T ss_dssp             TTCCS---------S------------------BCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH-CCEEEEEEEC
T ss_pred             CCCCC---------C------------------ccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEeec
Confidence            32100         0                  000000000001234679999999999999998777 8999999999


Q ss_pred             eeecCcc
Q 039097          245 YVKTEMT  251 (290)
Q Consensus       245 ~v~T~~~  251 (290)
                      .+..|..
T Consensus       164 ~vyGp~~  170 (315)
T d1e6ua_         164 NLYGPHD  170 (315)
T ss_dssp             EEESTTC
T ss_pred             cEECCCC
Confidence            9988754

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=3e-16  Score=129.40  Aligned_cols=182  Identities=14%  Similarity=0.070  Sum_probs=129.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      |..|+++||||+|+||++++++|+++|++|++++|++.+++.       .....+.++.+|++|.+++.++++       
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------~~~~~~~~~~gD~~d~~~l~~al~-------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------EGPRPAHVVVGDVLQAADVDKTVA-------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------SSCCCSEEEESCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------ccccccccccccccchhhHHHHhc-------
Confidence            456789999999999999999999999999999999876432       122458899999999999888776       


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      ..|+||+++|......                           ..+++..+..++++++    ++.+..++|++||....
T Consensus        67 ~~d~vi~~~g~~~~~~---------------------------~~~~~~~~~~~l~~aa----~~~~v~r~i~~ss~~~~  115 (205)
T d1hdoa_          67 GQDAVIVLLGTRNDLS---------------------------PTTVMSEGARNIVAAM----KAHGVDKVVACTSAFLL  115 (205)
T ss_dssp             TCSEEEECCCCTTCCS---------------------------CCCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGT
T ss_pred             CCCEEEEEeccCCchh---------------------------hhhhhHHHHHHHHHHH----HhcCCCeEEEEeeeecc
Confidence            6899999999642211                           0123344555555555    66667899999987543


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ...                                       ...++....|...|.+.+.+.+.     .++....|.|
T Consensus       116 ~~~---------------------------------------~~~~~~~~~~~~~~~~~e~~l~~-----~~~~~tiirp  151 (205)
T d1hdoa_         116 WDP---------------------------------------TKVPPRLQAVTDDHIRMHKVLRE-----SGLKYVAVMP  151 (205)
T ss_dssp             SCT---------------------------------------TCSCGGGHHHHHHHHHHHHHHHH-----TCSEEEEECC
T ss_pred             CCC---------------------------------------ccccccccccchHHHHHHHHHHh-----cCCceEEEec
Confidence            221                                       01123345677777777765542     4788889999


Q ss_pred             ceeecCcccC-----------CCCCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYN-----------AGRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~-----------~~~~~~e~~a~~~~~l~~~~~  274 (290)
                      |.+.......           .+.++.+|+|+.++..+..++
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~  193 (205)
T d1hdoa_         152 PHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE  193 (205)
T ss_dssp             SEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             ceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence            8875432221           124688999999998887766

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=1.9e-16  Score=140.72  Aligned_cols=186  Identities=16%  Similarity=0.049  Sum_probs=132.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .++|+||||||+|.||+++++.|+++|++|++++|+..+.....+....  ...+.++.+|++|.+.+.++++..     
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~--~~~i~~~~~Dl~d~~~l~~~~~~~-----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV--ADGMQSEIGDIRDQNKLLESIREF-----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT--TTTSEEEECCTTCHHHHHHHHHHH-----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc--ccCCeEEEeeccChHhhhhhhhhc-----
Confidence            4789999999999999999999999999999999987765544433321  235899999999999999988875     


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      .+|+++|.|+.....                    .+.+.....+.+|+.++.++++++...   .....+++.||....
T Consensus        79 ~~~~v~~~aa~~~~~--------------------~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~  135 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVR--------------------LSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCY  135 (356)
T ss_dssp             CCSEEEECCSCCCHH--------------------HHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGB
T ss_pred             hhhhhhhhhcccccc--------------------ccccCCccccccccccchhhhhhhhcc---ccccccccccccccc
Confidence            799999999965311                    134667788999999999999998532   223445555544332


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhC--------CC
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKY--------PN  235 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~--------~~  235 (290)
                      .....                              ..+... +....+...|+.+|.+.+.+++.++.++        .+
T Consensus       136 ~~~~~------------------------------~~~~~~-~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~  184 (356)
T d1rkxa_         136 DNKEW------------------------------IWGYRE-NEAMGGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHG  184 (356)
T ss_dssp             CCCCS------------------------------SSCBCT-TSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHC
T ss_pred             ccccc------------------------------cccccc-ccccCCCCccccccccchhhhhHHhhhcccchhccccC
Confidence            21100                              000000 1111245689999999999999888765        26


Q ss_pred             eEEEEeecceeecCc
Q 039097          236 FCINCVCPGYVKTEM  250 (290)
Q Consensus       236 i~vn~v~PG~v~T~~  250 (290)
                      +.+..+.|+.+..|-
T Consensus       185 ~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         185 TAVATVRAGNVIGGG  199 (356)
T ss_dssp             CEEEEEECCCEECTT
T ss_pred             ceEEeccCCCeeCCC
Confidence            778888888776654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.68  E-value=2.8e-16  Score=137.70  Aligned_cols=181  Identities=15%  Similarity=0.082  Sum_probs=126.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |+||||||+|.||++++++|+++|++|+.++|...... ..++.+..  ..++.++.+|++|.+++.+++...     ..
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGI--EGDIQYEDGDMADACSVQRAVIKA-----QP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTC--GGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcc--cCCcEEEEccccChHHhhhhhccc-----cc
Confidence            78999999999999999999999999999998754322 22333321  236899999999999999888875     67


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      +++++.|+......                    ..+...+.+++|+.++.++++.+...   ....++++.||.. ..+
T Consensus        74 ~~~~~~a~~~~~~~--------------------~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~-~~~  129 (321)
T d1rpna_          74 QEVYNLAAQSFVGA--------------------SWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSE-MFG  129 (321)
T ss_dssp             SEEEECCSCCCHHH--------------------HTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGG-GGC
T ss_pred             cccccccccccccc--------------------cccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchh-hcC
Confidence            88888887653211                    33446788999999999999988432   2234666666643 322


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ....                              ....+ +....+...|+.+|.+.+.+++.+..++ ++.+..+.|+.
T Consensus       130 ~~~~------------------------------~~~~E-~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lr~~~  177 (321)
T d1rpna_         130 LIQA------------------------------ERQDE-NTPFYPRSPYGVAKLYGHWITVNYRESF-GLHASSGILFN  177 (321)
T ss_dssp             SCSS------------------------------SSBCT-TSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECC
T ss_pred             cccC------------------------------CCCCC-CCCccccChhHHHHHHHHHHHHHHHhhc-CCcEEEEEEec
Confidence            2100                              00000 1111245789999999999999998776 57777777766


Q ss_pred             eecCc
Q 039097          246 VKTEM  250 (290)
Q Consensus       246 v~T~~  250 (290)
                      +..|.
T Consensus       178 vyGp~  182 (321)
T d1rpna_         178 HESPL  182 (321)
T ss_dssp             EECTT
T ss_pred             ccCCC
Confidence            66653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.3e-16  Score=140.04  Aligned_cols=179  Identities=17%  Similarity=0.089  Sum_probs=119.4

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +|+||||||+|.||++++++|+++|++|++++|......+......  ...++.+...|+.+.            .+.++
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~------------~~~~~   66 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEP------------LYIEV   66 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSC------------CCCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc--CCCceEEEehHHHHH------------HHcCC
Confidence            5889999999999999999999999999999874332222121111  112455555555432            22379


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |+|||+|+......                    ..++..+.+++|+.++.++++++.    +.. .++|++||...+..
T Consensus        67 d~VihlAa~~~~~~--------------------~~~~~~~~~~~Nv~g~~~ll~~~~----~~~-~k~I~~SS~~vy~~  121 (312)
T d2b69a1          67 DQIYHLASPASPPN--------------------YMYNPIKTLKTNTIGTLNMLGLAK----RVG-ARLLLASTSEVYGD  121 (312)
T ss_dssp             SEEEECCSCCSHHH--------------------HTTCHHHHHHHHHHHHHHHHHHHH----HHT-CEEEEEEEGGGGBS
T ss_pred             CEEEECcccCCchh--------------------HHhCHHHHHHHHHHHHHHHHHHHH----HcC-CcEEEEEChheecC
Confidence            99999999753110                    234556789999999999999884    333 48999998654432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ....                           ...+..........+...|+.||.+.+.+++.++..+ ++.+..+.|+.
T Consensus       122 ~~~~---------------------------~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~lR~~~  173 (312)
T d2b69a1         122 PEVH---------------------------PQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE-GVEVRVARIFN  173 (312)
T ss_dssp             CSSS---------------------------SBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECC
T ss_pred             CCCC---------------------------CCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh-CCcEEEEEeee
Confidence            1000                           0000000000000245789999999999999999887 88888999998


Q ss_pred             eecCcc
Q 039097          246 VKTEMT  251 (290)
Q Consensus       246 v~T~~~  251 (290)
                      +..|..
T Consensus       174 vyGp~~  179 (312)
T d2b69a1         174 TFGPRM  179 (312)
T ss_dssp             EECTTC
T ss_pred             EECCCC
Confidence            887653

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.8e-16  Score=140.37  Aligned_cols=214  Identities=12%  Similarity=0.004  Sum_probs=144.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +||||||+|.||++++++|+++| ++|+.+++.........      ...++.++.+|+++.+++.+.+.+      ++|
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~------~~~~~~~i~~Di~~~~~~~~~~~~------~~d   69 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------NHPHFHFVEGDISIHSEWIEYHVK------KCD   69 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------TCTTEEEEECCTTTCSHHHHHHHH------HCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc------cCCCeEEEECccCChHHHHHHHHh------CCC
Confidence            58999999999999999999999 48999988755433221      124699999999998776664432      589


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+|+......                    ..+.....+.+|+.++.++++.+.    +.. .+++++||...+...
T Consensus        70 ~Vih~a~~~~~~~--------------------~~~~~~~~~~~nv~gt~~ll~~~~----~~~-~~~~~~ss~~~~~~~  124 (342)
T d2blla1          70 VVLPLVAIATPIE--------------------YTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMC  124 (342)
T ss_dssp             EEEECBCCCCHHH--------------------HHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTC
T ss_pred             ccccccccccccc--------------------cccCCccccccccccccccccccc----ccc-ccccccccccccccc
Confidence            9999999753211                    334456789999999999999983    333 466777776654432


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeeccee
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYV  246 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v  246 (290)
                      ..... .                        .............+...|+.||.+.+.+++.++..+ ++.+..+.|..+
T Consensus       125 ~~~~~-~------------------------~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~i~r~~~~  178 (342)
T d2blla1         125 SDKYF-D------------------------EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE-GLQFTLFRPFNW  178 (342)
T ss_dssp             CCSSB-C------------------------TTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHHH-CCCEEEEEECSE
T ss_pred             ccccc-c------------------------cccccccccccCCCcchhhhcccchhhhhhhhhccc-CceeEEeecccc
Confidence            11000 0                        000000001111345789999999999999998887 677777776666


Q ss_pred             ecCcccC----------------------------------CCCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          247 KTEMTYN----------------------------------AGRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       247 ~T~~~~~----------------------------------~~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      ..+-...                                  +.....+|+++.+..++..+.....|..|..
T Consensus       179 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Ni  250 (342)
T d2blla1         179 MGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINI  250 (342)
T ss_dssp             ECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEE
T ss_pred             ccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhccccCCCeEEEE
Confidence            6542111                                  0134778999998888877655566777654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=1.1e-16  Score=142.11  Aligned_cols=224  Identities=16%  Similarity=0.073  Sum_probs=142.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      -|+||||||+|.||++++++|+++|+.|.+++++...-......+......++.++.+|++|.+.+.++++       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            46799999999999999999999998655554321100000111122234579999999999999888865       57


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      |.++|.|+......                    ..++..+.+++|+.++.++++.+...    . .++|++||...+..
T Consensus        75 ~~v~~~a~~~~~~~--------------------~~~~~~~~~~~N~~g~~nll~~~~~~----~-~k~i~~ss~~vyg~  129 (346)
T d1oc2a_          75 DAIVHYAAESHNDN--------------------SLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGD  129 (346)
T ss_dssp             SEEEECCSCCCHHH--------------------HHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCC
T ss_pred             hhhhhhhhcccccc--------------------hhhCcccceeeehHhHHhhhhhhccc----c-ccccccccceEecc
Confidence            88999998753211                    23455678999999999999888432    2 47888877754432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ..... ..+......                  .....+ +....+...|+.+|.+.+.+++.+..++ ++++..+.|+.
T Consensus       130 ~~~~~-~~~~~~~~~------------------~~~~~e-~~~~~p~s~Y~~sK~~~E~~~~~~~~~~-~i~~~ilR~~~  188 (346)
T d1oc2a_         130 LPLRE-DLPGHGEGP------------------GEKFTA-ETNYNPSSPYSSTKAASDLIVKAWVRSF-GVKATISNCSN  188 (346)
T ss_dssp             BCCGG-GSTTTTCST------------------TSSBCT-TSCCCCCSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEECC
T ss_pred             cCccc-cccccccCc------------------cccccc-CCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCEEEEeecc
Confidence            11000 000000000                  000000 0011235789999999999999988776 89999999998


Q ss_pred             eecCcccCC--------------------------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          246 VKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       246 v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      +..|.....                          ..+..+|+++.++.+...+.  ..+.+...
T Consensus       189 vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~~~~~~--~~~~~~~~  251 (346)
T d1oc2a_         189 NYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKGR--MGETYLIG  251 (346)
T ss_dssp             EESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHCC--TTCEEEEC
T ss_pred             eeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHHHhhcc--cCcccccc
Confidence            888643221                          13467888888776655444  44444433

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.9e-16  Score=133.26  Aligned_cols=182  Identities=14%  Similarity=0.077  Sum_probs=133.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .|++|+||||||+|.||++++++|+++|.  +|++++|++......       ....+....+|+.+.+++.+.+     
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-------~~~~i~~~~~D~~~~~~~~~~~-----   78 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------AYKNVNQEVVDFEKLDDYASAF-----   78 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------GGGGCEEEECCGGGGGGGGGGG-----
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-------ccceeeeeeecccccccccccc-----
Confidence            36789999999999999999999999995  799999987543321       1124677778888876654443     


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                        ..+|++||++|...                       ......+..++|+.++..+++.+    ++.+..++|++||.
T Consensus        79 --~~~d~vi~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~  129 (232)
T d2bkaa1          79 --QGHDVGFCCLGTTR-----------------------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSK  129 (232)
T ss_dssp             --SSCSEEEECCCCCH-----------------------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCT
T ss_pred             --cccccccccccccc-----------------------cccchhhhhhhcccccceeeecc----cccCccccccCCcc
Confidence              47899999998641                       33455667889999999999988    45566799999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      .....                                             ....|+.+|...+...+.+    +--++..
T Consensus       130 ~~~~~---------------------------------------------~~~~Y~~~K~~~E~~l~~~----~~~~~~I  160 (232)
T d2bkaa1         130 GADKS---------------------------------------------SNFLYLQVKGEVEAKVEEL----KFDRYSV  160 (232)
T ss_dssp             TCCTT---------------------------------------------CSSHHHHHHHHHHHHHHTT----CCSEEEE
T ss_pred             ccccC---------------------------------------------ccchhHHHHHHhhhccccc----cccceEE
Confidence            65432                                             2357999999988766532    1124667


Q ss_pred             eecceeecCcccCC--------------------CCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYNA--------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.||.+..+.....                    .+.+.+++|+.++..+..+.
T Consensus       161 lRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         161 FRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             EECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             ecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            88999987743321                    13466899999888877666

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.64  E-value=4.3e-15  Score=130.39  Aligned_cols=180  Identities=14%  Similarity=0.060  Sum_probs=119.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      +||||||+|.||++++++|+++|++|+.+++-... ..+....+..  ..++.++.+|+++.+++.++++..     ++|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~--~~~~~~i~~Di~~~~~l~~~~~~~-----~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--LGNFEFVHGDIRNKNDVTRLITKY-----MPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc--cCCcEEEEcccCCHHHHHHHHHhc-----CCc
Confidence            58999999999999999999999999998753322 2233333332  236899999999999999998875     799


Q ss_pred             EEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcccc
Q 039097           87 ILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMY  166 (290)
Q Consensus        87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~  166 (290)
                      +|||+|+......                    ..++..+.+++|+.|+.++++++.    +.+..+.|+.||.......
T Consensus        75 ~Vih~aa~~~~~~--------------------~~~~~~~~~~~Nv~gt~nll~~~~----~~~~~~~i~~sS~~~~~~~  130 (338)
T d1orra_          75 SCFHLAGQVAMTT--------------------SIDNPCMDFEINVGGTLNLLEAVR----QYNSNCNIIYSSTNKVYGD  130 (338)
T ss_dssp             EEEECCCCCCHHH--------------------HHHCHHHHHHHHHHHHHHHHHHHH----HHCTTCEEEEEEEGGGGTT
T ss_pred             eEEeecccccccc--------------------cccChHHHHHHHHHHHHHHHHhhh----ccccccccccccccccccc
Confidence            9999999763211                    345567899999999999999884    4455556666665444332


Q ss_pred             cchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCC-CCCCCCchhhhhhHHHHHHHHHHHHhhCC
Q 039097          167 VTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPET-KGWPANAAAYILSKAAMNAYTRILAKKYP  234 (290)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~~sKaa~~~~~~~la~e~~  234 (290)
                      .............                .....+.... .....+...|+.+|...+.+.......++
T Consensus       131 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~  183 (338)
T d1orra_         131 LEQYKYNETETRY----------------TCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG  183 (338)
T ss_dssp             CTTSCEEECSSCE----------------EETTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccccccccccccc----------------cccccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence            1110000000000                0000000000 01112468899999999999988888773

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=2.8e-16  Score=140.34  Aligned_cols=182  Identities=18%  Similarity=0.147  Sum_probs=129.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++.+||||||+|.||++++++|+++|+.|++++|.......  .     ......+..+|+.+.+.+.++++       .
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~-----~~~~~~~~~~D~~~~~~~~~~~~-------~   79 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--E-----DMFCDEFHLVDLRVMENCLKVTE-------G   79 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--G-----GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--h-----hcccCcEEEeechhHHHHHHHhh-------c
Confidence            46679999999999999999999999999999876543110  0     01235778899999988776664       6


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|.+||.|+......                   ...+.....+.+|+.++.++++++    ++.+..++|++||.....
T Consensus        80 ~d~Vih~a~~~~~~~-------------------~~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~  136 (363)
T d2c5aa1          80 VDHVFNLAADMGGMG-------------------FIQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYP  136 (363)
T ss_dssp             CSEEEECCCCCCCHH-------------------HHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSC
T ss_pred             CCeEeeccccccccc-------------------ccccccccccccccchhhHHHHhH----HhhCcccccccccccccc
Confidence            899999998764311                   134566788999999999999998    555667999999976554


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCC-CCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWP-ANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ......      .+...                    ....+..| .+...|+.+|.+.+.+++.+..++ ++.+..+.|
T Consensus       137 ~~~~~~------~~~~~--------------------~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~-gl~~~ilR~  189 (363)
T d2c5aa1         137 EFKQLE------TTNVS--------------------LKESDAWPAEPQDAFGLEKLATEELCKHYNKDF-GIECRIGRF  189 (363)
T ss_dssp             GGGSSS------SSSCE--------------------ECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH-CCEEEEEEE
T ss_pred             cccccc------ccccc--------------------cccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEEEEe
Confidence            321100      00000                    00000001 235689999999999999998777 888888888


Q ss_pred             ceeecCc
Q 039097          244 GYVKTEM  250 (290)
Q Consensus       244 G~v~T~~  250 (290)
                      +.+..+.
T Consensus       190 ~~vyG~~  196 (363)
T d2c5aa1         190 HNIYGPF  196 (363)
T ss_dssp             CCEECTT
T ss_pred             eeEeccC
Confidence            8888764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.61  E-value=1.3e-14  Score=130.45  Aligned_cols=192  Identities=18%  Similarity=0.113  Sum_probs=132.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHH-CCCeEEEEec---------CcccHHHHHHHHHhc-------CCCcEEEEEeeCCCHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLAL-NGIITVLTAR---------DEKGGLEAVEKLKHS-------GFDNVIFHQLDVADPA   69 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~r---------~~~~~~~~~~~l~~~-------~~~~~~~~~~Dl~~~~   69 (290)
                      .+||||||+|.||++++++|++ .|++|+++|+         .....+.....+...       ....+.++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            4699999999999999999986 6899999874         122233333333221       1235789999999999


Q ss_pred             HHHHHHHHHHhhcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS  149 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~  149 (290)
                      .++++++.    ..++|+|||.|+......                    ..+.....+++|+.++..+++++    ++.
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~~~~--------------------~~~~~~~~~~~N~~~t~~~l~~~----~~~  134 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLAVGE--------------------SVRDPLKYYDNNVVGILRLLQAM----LLH  134 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCCHHH--------------------HHHCHHHHHHHHHHHHHHHHHHH----HHT
T ss_pred             Hhhhhhhc----cceeehhhcccccccccc--------------------cccccccccccccccccccchhh----hcc
Confidence            98888875    357899999999764211                    33456678899999999999998    555


Q ss_pred             CCCeEEEEcCCCCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHH
Q 039097          150 DSARIVNVSSSLGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRIL  229 (290)
Q Consensus       150 ~~~~iV~isS~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~l  229 (290)
                      ...++++++|...........                        ......+..+. ....+...|+.+|.+.+.+++.+
T Consensus       135 ~~~~~~~~~s~~~~~~~~~~~------------------------~~~~~~~~~e~-~~~~p~~~Y~~sK~~~e~~~~~~  189 (383)
T d1gy8a_         135 KCDKIIFSSSAAIFGNPTMGS------------------------VSTNAEPIDIN-AKKSPESPYGESKLIAERMIRDC  189 (383)
T ss_dssp             TCCEEEEEEEGGGTBSCCC-----------------------------CCCCBCTT-SCCBCSSHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccccccccccccc------------------------ccccccccccc-cCCCCCCHHHhhHhHHHHHHHHH
Confidence            667888887766543221100                        00000001110 11134578999999999999998


Q ss_pred             HhhCCCeEEEEeecceeecCccc
Q 039097          230 AKKYPNFCINCVCPGYVKTEMTY  252 (290)
Q Consensus       230 a~e~~~i~vn~v~PG~v~T~~~~  252 (290)
                      ...+ ++.+..+.|+.+..+...
T Consensus       190 ~~~~-gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         190 AEAY-GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             HHHH-CCEEEEEEECEEECCCTT
T ss_pred             HHHh-CCCEEEEecceeeccCcc
Confidence            8776 788888888888776543

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.61  E-value=1.2e-15  Score=133.95  Aligned_cols=201  Identities=16%  Similarity=0.127  Sum_probs=138.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEE------EEecCccc-HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITV------LTARDEKG-GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi------~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +||||||+|.||++++++|+++|+.|.      ..++.... .......+  .....+.++..|+++.........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV--DADPRLRFVHGDIRDAGLLARELR----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG--TTCTTEEEEECCTTCHHHHHHHTT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh--hcCCCeEEEEeccccchhhhcccc----
Confidence            589999999999999999999997544      33322111 11111111  122468999999999987665433    


Q ss_pred             hcCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           81 HFGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        81 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                         .+|.+||.|+.....                    ...+...+.+++|+.++.++++++    ++.+..++|++||.
T Consensus        76 ---~~d~vi~~a~~~~~~--------------------~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~  128 (322)
T d1r6da_          76 ---GVDAIVHFAAESHVD--------------------RSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTN  128 (322)
T ss_dssp             ---TCCEEEECCSCCCHH--------------------HHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEG
T ss_pred             ---ccceEEeeccccccc--------------------ccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecc
Confidence               789999999875321                    145566778899999999999999    44456799999998


Q ss_pred             CCcccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEE
Q 039097          161 LGKLMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINC  240 (290)
Q Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~  240 (290)
                      ..+......                           ...+.+    . ..+...|+.+|.+.+.+++.++.++ ++.+..
T Consensus       129 ~~yg~~~~~---------------------------~~~E~~----~-~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~  175 (322)
T d1r6da_         129 QVYGSIDSG---------------------------SWTESS----P-LEPNSPYAASKAGSDLVARAYHRTY-GLDVRI  175 (322)
T ss_dssp             GGGCCCSSS---------------------------CBCTTS----C-CCCCSHHHHHHHHHHHHHHHHHHHH-CCCEEE
T ss_pred             eeecCCCCC---------------------------CCCCCC----C-CCCCCHHHHHHHHHHHHHHHHHHHh-CCCEEE
Confidence            655432100                           000111    0 1235689999999999999998877 788888


Q ss_pred             eecceeecCcccCC--------------------------CCCChhhhccchhhhhhccC
Q 039097          241 VCPGYVKTEMTYNA--------------------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       241 v~PG~v~T~~~~~~--------------------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.|+.+..|.....                          .....+|+++.++.++..+.
T Consensus       176 lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~  235 (322)
T d1r6da_         176 TRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR  235 (322)
T ss_dssp             EEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC
T ss_pred             EEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC
Confidence            99988887753321                          02367888888888776554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=5.1e-15  Score=123.21  Aligned_cols=207  Identities=15%  Similarity=0.036  Sum_probs=132.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCe--EEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGII--TVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~--Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++||||||+|+||++++++|+++|+.  |+.+.|++.+...    +    ...+.++.+|+++.+++.++++       .
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~----~~~~~~~~~d~~~~~~~~~~~~-------~   68 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I----GGEADVFIGDITDADSINPAFQ-------G   68 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T----TCCTTEEECCTTSHHHHHHHHT-------T
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c----cCCcEEEEeeeccccccccccc-------c
Confidence            69999999999999999999999975  5556787654322    1    2357889999999999887776       6


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCcc
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKL  164 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~  164 (290)
                      +|.+||+|+..........       .............+.....+|+.+...+......    ...+.....|+.....
T Consensus        69 ~d~vi~~a~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~~~  137 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFD-------PTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AGVKHIVVVGSMGGTN  137 (252)
T ss_dssp             CSEEEECCCCCCEECTTCC-------TTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HTCSEEEEEEETTTTC
T ss_pred             ceeeEEEEeeccccccccc-------hhhhhhcccccccchhhhccccccceeecccccc----ccccccccccccccCC
Confidence            8999999987643221110       0000111113344566778899999888877643    3457778777765543


Q ss_pred             cccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecc
Q 039097          165 MYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPG  244 (290)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG  244 (290)
                      +..                                          +....+...+.........+. ...++++..+.||
T Consensus       138 ~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ilRp~  174 (252)
T d2q46a1         138 PDH------------------------------------------PLNKLGNGNILVWKRKAEQYL-ADSGTPYTIIRAG  174 (252)
T ss_dssp             TTC------------------------------------------GGGGGGGCCHHHHHHHHHHHH-HHSSSCEEEEEEC
T ss_pred             CCc------------------------------------------ccccccccchhhhhhhhhhhh-hcccccceeecce
Confidence            220                                          111112222222222222222 2358889999999


Q ss_pred             eeecCcccCC---------------CCCChhhhccchhhhhhccCCCCceeEeec
Q 039097          245 YVKTEMTYNA---------------GRLTVEEGAESPVWLALLHKGGPSGLFFSR  284 (290)
Q Consensus       245 ~v~T~~~~~~---------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~  284 (290)
                      .+..+.....               +..+.+|+|+.++..+..++  ..|+.|..
T Consensus       175 ~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~--~~g~~~~i  227 (252)
T d2q46a1         175 GLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE--AKNKAFDL  227 (252)
T ss_dssp             EEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG--GTTEEEEE
T ss_pred             EEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHHhCCcc--ccCcEEEE
Confidence            9987753332               24578999999988887665  55665543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.43  E-value=1.2e-13  Score=113.89  Aligned_cols=174  Identities=13%  Similarity=0.007  Sum_probs=119.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|++|||||+|.||++++++|+++|+  +|+...|++...           ..+   +..++.|..++.+      ...+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-----------~~~---~~~~~~d~~~~~~------~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-----------HPR---LDNPVGPLAELLP------QLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-----------CTT---EECCBSCHHHHGG------GCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-----------ccc---ccccccchhhhhh------cccc
Confidence            48999999999999999999999997  577777764321           012   3444555443322      2234


Q ss_pred             CccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           84 KLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        84 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      .+|.+|+++|....                      ....-+...++|+.++..+++.+    ++.+..+++++||..+.
T Consensus        62 ~~d~vi~~~g~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~  115 (212)
T d2a35a1          62 SIDTAFCCLGTTIK----------------------EAGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGAD  115 (212)
T ss_dssp             CCSEEEECCCCCHH----------------------HHSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCC
T ss_pred             chheeeeeeeeecc----------------------ccccccccccchhhhhhhccccc----ccccccccccccccccc
Confidence            78999999986421                      11223567889999999999988    55666899999997654


Q ss_pred             ccccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          164 LMYVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      .                                             .....|..+|...+...+    +..--+...+.|
T Consensus       116 ~---------------------------------------------~~~~~y~~~K~~~E~~l~----~~~~~~~~I~Rp  146 (212)
T d2a35a1         116 A---------------------------------------------KSSIFYNRVKGELEQALQ----EQGWPQLTIARP  146 (212)
T ss_dssp             T---------------------------------------------TCSSHHHHHHHHHHHHHT----TSCCSEEEEEEC
T ss_pred             c---------------------------------------------ccccchhHHHHHHhhhcc----ccccccceeeCC
Confidence            3                                             223679999998887664    221125667889


Q ss_pred             ceeecCcccCC-----------------CCCChhhhccchhhhhhccC
Q 039097          244 GYVKTEMTYNA-----------------GRLTVEEGAESPVWLALLHK  274 (290)
Q Consensus       244 G~v~T~~~~~~-----------------~~~~~e~~a~~~~~l~~~~~  274 (290)
                      +.+..+.....                 .++..+|+|+.++.++..+.
T Consensus       147 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         147 SLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             CSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             cceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            98877643321                 13466899999888876544

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.40  E-value=3.4e-12  Score=109.99  Aligned_cols=84  Identities=15%  Similarity=0.109  Sum_probs=64.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH-HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL-EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++++||||||+|.||++++++|+++|++|++++|+..... ...+.+.......+.++.+|+++.+++.+.++       
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------   74 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------   74 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------
Confidence            3566999999999999999999999999999999765422 12222222223458899999999998887766       


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ..+.++++++..
T Consensus        75 ~~~~~~~~~~~~   86 (312)
T d1qyda_          75 QVDVVISALAGG   86 (312)
T ss_dssp             TCSEEEECCCCS
T ss_pred             Ccchhhhhhhhc
Confidence            678999988753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.34  E-value=1.4e-12  Score=111.81  Aligned_cols=107  Identities=20%  Similarity=0.227  Sum_probs=81.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +||||||+|.||++++++|.++|+ ++.++++...                  +.+|++|.+.+++++++.     ++|+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~------------------~~~Dl~~~~~~~~~i~~~-----~~D~   57 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE------------------FCGDFSNPKGVAETVRKL-----RPDV   57 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS------------------SCCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc------------------ccCcCCCHHHHHHHHHHc-----CCCE
Confidence            499999999999999999998886 4444554321                  347999999999988875     7999


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGK  163 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~  163 (290)
                      |||+||......                    +.+.-...+.+|+.++..+.+++.    +. +.+++++||....
T Consensus        58 Vih~Aa~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~-~~~~~~~ss~~~~  108 (298)
T d1n2sa_          58 IVNAAAHTAVDK--------------------AESEPELAQLLNATSVEAIAKAAN----ET-GAWVVHYSTDYVF  108 (298)
T ss_dssp             EEECCCCCCHHH--------------------HTTCHHHHHHHHTHHHHHHHHHHT----TT-TCEEEEEEEGGGS
T ss_pred             EEEecccccccc--------------------cccCccccccccccccccchhhhh----cc-ccccccccccccc
Confidence            999999763211                    234456788999999999999883    33 3577777776543

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.30  E-value=2.1e-11  Score=104.16  Aligned_cols=84  Identities=18%  Similarity=0.220  Sum_probs=65.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH--HHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL--EAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++|+||||||+|.||++++++|+++|++|++++|+.....  +....+.......+.++.+|+.+.....+.++      
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence            4788999999999999999999999999999999765432  22222332233458889999999998877776      


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                       ..+.+|++++..
T Consensus        76 -~~~~vi~~~~~~   87 (307)
T d1qyca_          76 -NVDVVISTVGSL   87 (307)
T ss_dssp             -TCSEEEECCCGG
T ss_pred             -hceeeeeccccc
Confidence             578999988753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.28  E-value=1.8e-11  Score=104.18  Aligned_cols=186  Identities=19%  Similarity=0.165  Sum_probs=124.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +||||||+|.||++++++|.++|+.|+.++|+.                      +|++|.++++++++..     ++|+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------~D~~d~~~~~~~l~~~-----~~d~   55 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------LDITNVLAVNKFFNEK-----KPNV   55 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------CCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------ccCCCHHHHHHHHHHc-----CCCE
Confidence            499999999999999999999999999999863                      5899999999988865     7899


Q ss_pred             EEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccccc
Q 039097           88 LVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLMYV  167 (290)
Q Consensus        88 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~~~  167 (290)
                      |||+|+......                    ........+..|+.....+.+....     ....+++.||........
T Consensus        56 vih~a~~~~~~~--------------------~~~~~~~~~~~n~~~~~~~~~~~~~-----~~~~~~~~ss~~v~~~~~  110 (281)
T d1vl0a_          56 VINCAAHTAVDK--------------------CEEQYDLAYKINAIGPKNLAAAAYS-----VGAEIVQISTDYVFDGEA  110 (281)
T ss_dssp             EEECCCCCCHHH--------------------HHHCHHHHHHHHTHHHHHHHHHHHH-----HTCEEEEEEEGGGSCSCC
T ss_pred             EEeecccccccc--------------------ccccchhhccccccccccccccccc-----ccccccccccceeeeccc
Confidence            999999753211                    3344566777888888777776643     234566666654332210


Q ss_pred             chhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecceee
Q 039097          168 THEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGYVK  247 (290)
Q Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~v~  247 (290)
                      .                               .+..+.+ .+.+...|+.+|.+.+.+.+..     +.+...+.|+.+.
T Consensus       111 ~-------------------------------~~~~e~~-~~~~~~~~~~~k~~~e~~~~~~-----~~~~~i~R~~~vy  153 (281)
T d1vl0a_         111 K-------------------------------EPITEFD-EVNPQSAYGKTKLEGENFVKAL-----NPKYYIVRTAWLY  153 (281)
T ss_dssp             S-------------------------------SCBCTTS-CCCCCSHHHHHHHHHHHHHHHH-----CSSEEEEEECSEE
T ss_pred             c-------------------------------ccccccc-cccchhhhhhhhhHHHHHHHHh-----CCCccccceeEEe
Confidence            0                               0011111 1234578999999888776543     3455567777776


Q ss_pred             cCcccCC---------------------CCCChhhhccchhhhhhccCCCCceeEeecC
Q 039097          248 TEMTYNA---------------------GRLTVEEGAESPVWLALLHKGGPSGLFFSRK  285 (290)
Q Consensus       248 T~~~~~~---------------------~~~~~e~~a~~~~~l~~~~~~~~~g~~~~~~  285 (290)
                      .+-....                     .....+|+++.+.+++....   +|.+...+
T Consensus       154 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~---~g~~~~~~  209 (281)
T d1vl0a_         154 GDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN---YGTFHCTC  209 (281)
T ss_dssp             SSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC---CEEEECCC
T ss_pred             CCCcccccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhhcc---cCceeEeC
Confidence            6642221                     23577888888888775543   45554433

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.20  E-value=6.9e-11  Score=104.16  Aligned_cols=78  Identities=21%  Similarity=0.216  Sum_probs=59.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHH-HHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAI-HSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v-~~~~~~~~~~~~   83 (290)
                      ++|+|+||||+|.||++++++|+++|++|+++.|++.+...  +.+..  ...+.++.+|+.|..++ +.++       .
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~--~~~v~~~~gD~~d~~~~~~~a~-------~   70 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--IPNVTLFQGPLLNNVPLMDTLF-------E   70 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--STTEEEEESCCTTCHHHHHHHH-------T
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc--cCCCEEEEeeCCCcHHHHHHHh-------c
Confidence            58999999999999999999999999999999999876432  22221  13589999999997653 3332       3


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      ..|.++.+..
T Consensus        71 ~~~~~~~~~~   80 (350)
T d1xgka_          71 GAHLAFINTT   80 (350)
T ss_dssp             TCSEEEECCC
T ss_pred             CCceEEeecc
Confidence            6788777654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=3.2e-10  Score=97.05  Aligned_cols=169  Identities=18%  Similarity=0.147  Sum_probs=101.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh--hcCCc
Q 039097            9 AVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS--HFGKL   85 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~i   85 (290)
                      ||||||+|.||++++++|+++|+ .|+++++-..... .. .+.+       ...+|..+.+.   ..+....  .+..+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~-~~-~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~   69 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVD-------LNIADYMDKED---FLIQIMAGEEFGDV   69 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GH-HHHT-------SCCSEEEEHHH---HHHHHHTTCCCSSC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcch-hh-cccc-------cchhhhccchH---HHHHHhhhhcccch
Confidence            79999999999999999999997 5777764332211 11 1110       11233333333   3333332  34578


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCCCCccc
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSSLGKLM  165 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~~g~~~  165 (290)
                      ++++|.|+....                      ..........+|+.+...+++.+..    ... ++|+.||......
T Consensus        70 ~~i~~~aa~~~~----------------------~~~~~~~~~~~~~~~~~~~l~~~~~----~~i-~~v~~ss~~~~~~  122 (307)
T d1eq2a_          70 EAIFHEGACSST----------------------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGG  122 (307)
T ss_dssp             CEEEECCSCCCT----------------------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTT
T ss_pred             hhhhhhcccccc----------------------ccccccccccccccccccccccccc----ccc-ccccccccccccc
Confidence            999999986532                      2223455678888888888887743    233 3555555544432


Q ss_pred             ccchhhhhcccCCccCcCHHHHHHHHHHHHhhhcCCCCCCCCCCCCchhhhhhHHHHHHHHHHHHhhCCCeEEEEeecce
Q 039097          166 YVTHEWAKGVFSDAENLTEERVDEVLSQYLNDYKEGSPETKGWPANAAAYILSKAAMNAYTRILAKKYPNFCINCVCPGY  245 (290)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~i~vn~v~PG~  245 (290)
                      ....                               ..+.. ....+...|+.+|.+.+.+++.++.++ ++.+..+.|..
T Consensus       123 ~~~~-------------------------------~~~~~-~~~~~~~~Y~~~K~~~e~~~~~~~~~~-~~~~~~~r~~~  169 (307)
T d1eq2a_         123 RTSD-------------------------------FIESR-EYEKPLNVYGYSKFLFDEYVRQILPEA-NSQIVGFRYFN  169 (307)
T ss_dssp             CCSC-------------------------------BCSSG-GGCCCSSHHHHHHHHHHHHHHHHGGGC-SSCEEEEEECE
T ss_pred             cccc-------------------------------ccccc-cccccccccccccchhhhhcccccccc-cccccccccee
Confidence            2100                               00000 011345789999999999999998877 55555555555


Q ss_pred             eecC
Q 039097          246 VKTE  249 (290)
Q Consensus       246 v~T~  249 (290)
                      +..|
T Consensus       170 vyGp  173 (307)
T d1eq2a_         170 VYGP  173 (307)
T ss_dssp             EESS
T ss_pred             Eeec
Confidence            5554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.99  E-value=7.2e-14  Score=112.99  Aligned_cols=47  Identities=17%  Similarity=0.219  Sum_probs=42.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG   54 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~   54 (290)
                      ++.|+||+|+||+++|++|+++|++|++.+|+++++++..+++.+..
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~   48 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIA   48 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence            46788999999999999999999999999999999999888887654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.07  E-value=1.2e-05  Score=63.82  Aligned_cols=86  Identities=17%  Similarity=0.136  Sum_probs=58.6

Q ss_pred             CcE-EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh-hcC
Q 039097            6 KRY-AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS-HFG   83 (290)
Q Consensus         6 ~k~-~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~   83 (290)
                      |.+ ++++||+|++|.+.++.....|++||.+.|+.++.++..+.+++.+.+.+  +.-|-.+..++.+.+.++.. ..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~v--i~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV--ITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE--EEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEE--EeccccchhHHHHHHHHHHhhccC
Confidence            454 44579999999999999999999999999998888887777777665432  22221122223333333332 345


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      .+|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999887

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.04  E-value=6.1e-06  Score=65.13  Aligned_cols=79  Identities=20%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +|.++||+||+|++|.+.++.....|++|+.+++++++.+.    +++.+.+    ..+|-.+++..++..+...  ...
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~----~vi~~~~~~~~~~~~~~~~--~~G   98 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFD----AAFNYKTVNSLEEALKKAS--PDG   98 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCS----EEEETTSCSCHHHHHHHHC--TTC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhh----hhcccccccHHHHHHHHhh--cCC
Confidence            47899999999999999999999999999999998765333    3333322    2234455544444444322  237


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|+++.+.|
T Consensus        99 vd~v~D~vG  107 (182)
T d1v3va2          99 YDCYFDNVG  107 (182)
T ss_dssp             EEEEEESSC
T ss_pred             CceeEEecC
Confidence            999999998

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=1.7e-05  Score=62.53  Aligned_cols=82  Identities=22%  Similarity=0.272  Sum_probs=64.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHH---HHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVE---KLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++++|+|+|.|+ ||.|++++..|+..|. ++++..|+.+..++..+   .+....  ......+|+.+.+++.+...  
T Consensus        15 ~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          15 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENT--DCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS--SCEEEEEETTCHHHHHHHHH--
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhc--CcceEeeecccccchhhhhc--
Confidence            578999999998 6999999999999998 68899999887765443   333333  24456789999887766655  


Q ss_pred             HhhcCCccEEEEcccc
Q 039097           79 RSHFGKLDILVNNAGI   94 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~   94 (290)
                           ..|++||+...
T Consensus        90 -----~~diiIN~Tp~  100 (182)
T d1vi2a1          90 -----SADILTNGTKV  100 (182)
T ss_dssp             -----TCSEEEECSST
T ss_pred             -----ccceeccccCC
Confidence                 68999999865

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.5e-05  Score=62.25  Aligned_cols=79  Identities=19%  Similarity=0.302  Sum_probs=56.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+|||+||+|++|...++.+...|++|+++++++++.+.+    ++.+.+.    .+|.++.+-.+++.+....  ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~----vi~~~~~~~~~~i~~~t~~--~g   97 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHE----VFNHREVNYIDKIKKYVGE--KG   97 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSE----EEETTSTTHHHHHHHHHCT--TC
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCccc----ccccccccHHHHhhhhhcc--CC
Confidence            578999999999999999999999999999999886554332    2333332    2477766544444333322  26


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.+.|
T Consensus        98 ~d~v~d~~g  106 (174)
T d1yb5a2          98 IDIIIEMLA  106 (174)
T ss_dssp             EEEEEESCH
T ss_pred             ceEEeeccc
Confidence            999999887

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.93  E-value=1.6e-05  Score=61.73  Aligned_cols=76  Identities=18%  Similarity=0.211  Sum_probs=55.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+|.++|.|| |.+|+.+|+.|+++|++|++.+|+.+++++..+++     ........+..........+.       .
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~-----~~~~~~~~~~~~~~~~~~~i~-------~   67 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV-----QHSTPISLDVNDDAALDAEVA-------K   67 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc-----cccccccccccchhhhHhhhh-------c
Confidence            3688999877 99999999999999999999999988777655433     234555566666665555544       4


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      .|.++....
T Consensus        68 ~~~~i~~~~   76 (182)
T d1e5qa1          68 HDLVISLIP   76 (182)
T ss_dssp             SSEEEECSC
T ss_pred             cceeEeecc
Confidence            566665443

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.93  E-value=7.3e-06  Score=64.48  Aligned_cols=78  Identities=21%  Similarity=0.172  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+||+||+|...++.....|++|+.+++++++.+... ++   +.+ ..   .|-.+  ...+..+.+  .-++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l---Ga~-~v---i~~~~--~~~~~~~~~--~~~g   98 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL---GAK-EV---LARED--VMAERIRPL--DKQR   98 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT---TCS-EE---EECC-----------C--CSCC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc---ccc-ee---eecch--hHHHHHHHh--hccC
Confidence            4789999999999999999999999999999999988755433 22   322 21   13221  112222211  2247


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.+.|-
T Consensus        99 vD~vid~vgg  108 (176)
T d1xa0a2          99 WAAAVDPVGG  108 (176)
T ss_dssp             EEEEEECSTT
T ss_pred             cCEEEEcCCc
Confidence            9999999984

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.91  E-value=1.4e-05  Score=62.77  Aligned_cols=79  Identities=15%  Similarity=0.161  Sum_probs=54.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.++||+||+|++|..+++.+...|++|+++++++++.+    .+++.+.+    ...|-.+++-.+++.+.. . ..+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~----~vi~~~~~~~~~~v~~~t-~-~~g   94 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVE----YVGDSRSVDFADEILELT-D-GYG   94 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCS----EEEETTCSTHHHHHHHHT-T-TCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccccccc----ccccCCccCHHHHHHHHh-C-CCC
Confidence            3789999999999999999999999999999998875533    33333433    224555544333332221 1 136


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|+++.+.|
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            999999998

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.85  E-value=1.7e-05  Score=62.03  Aligned_cols=80  Identities=14%  Similarity=0.159  Sum_probs=57.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|+||+|++|...++.....|++|+++++++++.+... ++   +.+    ..+|-++++-.+++.+ +. .-..
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l---Ga~----~vi~~~~~d~~~~v~~-~t-~g~g   97 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA---GAW----QVINYREEDLVERLKE-IT-GGKK   97 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCS----EEEETTTSCHHHHHHH-HT-TTCC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc---CCe----EEEECCCCCHHHHHHH-Hh-CCCC
Confidence            4789999999999999999999999999999999987765433 22   322    2357677554444322 21 1236


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|+++.+.|.
T Consensus        98 ~d~v~d~~g~  107 (179)
T d1qora2          98 VRVVYDSVGR  107 (179)
T ss_dssp             EEEEEECSCG
T ss_pred             eEEEEeCccH
Confidence            9999998883

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.83  E-value=5e-05  Score=58.82  Aligned_cols=82  Identities=26%  Similarity=0.242  Sum_probs=55.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC-
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG-   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-   83 (290)
                      .|.+++|+| +|+||...++.+...|++|+++++++++.+.+.+ +   +..  ..+..|-. .++..+..+++.+..+ 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~---ga~--~~~~~~~~-~~~~~~~~~~~~~~~g~   97 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C---GAD--VTLVVDPA-KEEESSIIERIRSAIGD   97 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T---TCS--EEEECCTT-TSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c---CCc--EEEecccc-ccccchhhhhhhccccc
Confidence            477899997 6899999999999999999999999877554332 2   222  12222322 2233444555554443 


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus        98 g~D~vid~~g~  108 (170)
T d1e3ja2          98 LPNVTIDCSGN  108 (170)
T ss_dssp             CCSEEEECSCC
T ss_pred             CCceeeecCCC
Confidence            69999999983

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=2.1e-05  Score=52.91  Aligned_cols=42  Identities=29%  Similarity=0.235  Sum_probs=37.6

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      .++.++||+||+||+|...++.+...|++|+.+++++++.+-
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~   71 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY   71 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence            357899999999999999999999999999999999877654

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=1.3e-05  Score=65.45  Aligned_cols=82  Identities=12%  Similarity=0.168  Sum_probs=57.1

Q ss_pred             CCcCCCcEEEEecC----------------CCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEee
Q 039097            1 MAETAKRYAVVTGA----------------NKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLD   64 (290)
Q Consensus         1 m~~~~~k~~lITGg----------------s~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D   64 (290)
                      |.+|+|+++|||+|                ||..|.+||+.+..+|++|.++.......          .+..+..  ..
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------~p~~~~~--~~   68 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------TPPFVKR--VD   68 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------CCTTEEE--EE
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------ccccccc--ce
Confidence            67899999999977                56779999999999999999886543210          1112333  33


Q ss_pred             CCCHHHHHHHHHHHHhhcCCccEEEEccccCCC
Q 039097           65 VADPAAIHSVADFIRSHFGKLDILVNNAGITGI   97 (290)
Q Consensus        65 l~~~~~v~~~~~~~~~~~~~id~li~~Ag~~~~   97 (290)
                      +.+.++..+.   +.+.+...|++|++|++...
T Consensus        69 ~~t~~~m~~~---~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          69 VMTALEMEAA---VNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHH---HHHHGGGCSEEEECCBCCSE
T ss_pred             ehhhHHHHHH---HHhhhccceeEeeeechhhh
Confidence            4444444444   44445578999999998753

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.74  E-value=0.00015  Score=54.99  Aligned_cols=80  Identities=25%  Similarity=0.236  Sum_probs=59.0

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVA   75 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~   75 (290)
                      |.+..++++.|.|+ |.+|.++|..|+.+|.  ++++.|+++++++....++.+..   ...+.+...|.   +      
T Consensus         1 m~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~------   70 (148)
T d1ldna1           1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D------   70 (148)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G------
T ss_pred             CCCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H------
Confidence            77888899999997 9999999999999985  79999999888776555665432   22333333333   1      


Q ss_pred             HHHHhhcCCccEEEEccccC
Q 039097           76 DFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        76 ~~~~~~~~~id~li~~Ag~~   95 (290)
                           ....-|++|..||..
T Consensus        71 -----~l~daDvvvitag~~   85 (148)
T d1ldna1          71 -----DCRDADLVVICAGAN   85 (148)
T ss_dssp             -----GTTTCSEEEECCSCC
T ss_pred             -----HhccceeEEEecccc
Confidence                 123579999999964

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.73  E-value=3.8e-05  Score=57.14  Aligned_cols=73  Identities=18%  Similarity=0.334  Sum_probs=57.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      +++|.|+ |.+|+.+++.|.++|+.|++.+++++..+...+++      ...++..|.++.+.++++-      ....|.
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~------~~~vi~Gd~~~~~~l~~~~------i~~a~~   68 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAG------IEDADM   68 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTT------TTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh------hhhhccCcccchhhhhhcC------hhhhhh
Confidence            6889997 99999999999999999999999988776654432      3677889999999766651      135777


Q ss_pred             EEEccc
Q 039097           88 LVNNAG   93 (290)
Q Consensus        88 li~~Ag   93 (290)
                      ++....
T Consensus        69 vv~~t~   74 (132)
T d1lssa_          69 YIAVTG   74 (132)
T ss_dssp             EEECCS
T ss_pred             hcccCC
Confidence            777543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.69  E-value=7.1e-05  Score=57.60  Aligned_cols=73  Identities=16%  Similarity=0.225  Sum_probs=56.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++++++++|.|+ |++|..+++.|...|+ ++.++.|+.++.++..+++.      ...     .+.+++.+.+.     
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~------~~~-----~~~~~~~~~l~-----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------GEA-----VRFDELVDHLA-----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------CEE-----CCGGGHHHHHH-----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh------ccc-----ccchhHHHHhc-----
Confidence            678999999998 9999999999999998 69999999888777766652      111     22334444444     


Q ss_pred             cCCccEEEEcccc
Q 039097           82 FGKLDILVNNAGI   94 (290)
Q Consensus        82 ~~~id~li~~Ag~   94 (290)
                        ..|++|++.+-
T Consensus        84 --~~Divi~atss   94 (159)
T d1gpja2          84 --RSDVVVSATAA   94 (159)
T ss_dssp             --TCSEEEECCSS
T ss_pred             --cCCEEEEecCC
Confidence              68999999884

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=0.00015  Score=56.19  Aligned_cols=74  Identities=16%  Similarity=0.228  Sum_probs=52.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++++|+||+|++|...++.+...|++|+.+++++++.+.+. +   .+.+.+    .|..+.      .+++. ...+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~---lGa~~~----i~~~~~------~~~~~-~~~g   91 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA----ATYAEV------PERAK-AWGG   91 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE----EEGGGH------HHHHH-HTTS
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-c---ccccee----eehhhh------hhhhh-cccc
Confidence            5889999999999999999999999999999999887665433 2   232221    243322      12222 2357


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|++|.+.|
T Consensus        92 ~D~v~d~~G  100 (171)
T d1iz0a2          92 LDLVLEVRG  100 (171)
T ss_dssp             EEEEEECSC
T ss_pred             ccccccccc
Confidence            999999876

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.51  E-value=0.00067  Score=51.14  Aligned_cols=76  Identities=14%  Similarity=0.094  Sum_probs=52.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCC--CeEEEEecCcccHHHHHHHHHhc--CCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNG--IITVLTARDEKGGLEAVEKLKHS--GFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g--~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +.+++.|.|+ |.+|..+|..|+.+|  .+|++.|+++++.+....++...  ..........|.   +           
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------
Confidence            4668888895 999999999999998  37999999987766555555432  112233344443   1           


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                      ....-|++|..||..
T Consensus        69 ~~~~adivvitag~~   83 (146)
T d1ez4a1          69 DCKDADLVVITAGAP   83 (146)
T ss_dssp             GGTTCSEEEECCCC-
T ss_pred             HhccccEEEEecccc
Confidence            123689999999964

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.45  E-value=0.00017  Score=55.93  Aligned_cols=76  Identities=16%  Similarity=0.172  Sum_probs=56.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++||.|+|.|+ ||.+++++..|.+.|.+|.++.|+.++.++..+.+....  .+..+  +..+.            ..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~--~~~~~--~~~~~------------~~   77 (170)
T d1nyta1          15 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQAL--SMDEL------------EG   77 (170)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEEC--CSGGG------------TT
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc--ccccc--ccccc------------cc
Confidence            467999999997 888999999999999999999999988888777765443  22222  22211            12


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ...|++||+....
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            3689999998553

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.42  E-value=0.00044  Score=53.93  Aligned_cols=80  Identities=20%  Similarity=0.178  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc-
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF-   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   82 (290)
                      .|.+++|+|+ |+||...++.+...|+ +|+++++++++.+-+ +++   +.+    ...|.++. +..+..+++.+.. 
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~----~vi~~~~~-~~~~~~~~i~~~~~   97 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI---GAD----LTLNRRET-SVEERRKAIMDITH   97 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT---TCS----EEEETTTS-CHHHHHHHHHHHTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc---cce----EEEecccc-chHHHHHHHHHhhC
Confidence            5889999987 8999999999999998 799999998776543 333   322    22344432 2222233333322 


Q ss_pred             -CCccEEEEcccc
Q 039097           83 -GKLDILVNNAGI   94 (290)
Q Consensus        83 -~~id~li~~Ag~   94 (290)
                       ..+|++|.+.|.
T Consensus        98 ~~g~Dvvid~vG~  110 (182)
T d1vj0a2          98 GRGADFILEATGD  110 (182)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCceEEeecCCc
Confidence             259999999984

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.41  E-value=0.00033  Score=53.96  Aligned_cols=80  Identities=14%  Similarity=0.147  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .+.+++|.|++|++|..+++.+...|+ +|+++++++++.+.+. +   .+.+    ...|-++.+..++..+...  -+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~---~Ga~----~~i~~~~~~~~~~~~~~~~--~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-R---AGAD----YVINASMQDPLAEIRRITE--SK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-H---HTCS----EEEETTTSCHHHHHHHHTT--TS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-H---cCCc----eeeccCCcCHHHHHHHHhh--cc
Confidence            477999999999999999999999995 7888898876544432 2   2322    2345555554444443321  13


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus        97 ~~d~vid~~g~  107 (170)
T d1jvba2          97 GVDAVIDLNNS  107 (170)
T ss_dssp             CEEEEEESCCC
T ss_pred             cchhhhccccc
Confidence            69999999983

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.40  E-value=7e-05  Score=55.57  Aligned_cols=72  Identities=13%  Similarity=0.122  Sum_probs=53.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHH-HHHHHhhcCCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSV-ADFIRSHFGKL   85 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~i   85 (290)
                      |.++|.|. |-+|+.+|+.|.++|+.|++.+.+++..++..    ..+   ...+.+|.++++.+.++ ++       +.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~---~~~~~gd~~~~~~l~~a~i~-------~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA---THAVIANATEENELLSLGIR-------NF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC---SEEEECCTTCTTHHHHHTGG-------GC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC---CcceeeecccchhhhccCCc-------cc
Confidence            45667755 89999999999999999999999987655532    222   45667899998876654 22       56


Q ss_pred             cEEEEccc
Q 039097           86 DILVNNAG   93 (290)
Q Consensus        86 d~li~~Ag   93 (290)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            87777666

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.0012  Score=50.74  Aligned_cols=80  Identities=23%  Similarity=0.292  Sum_probs=54.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++.+++-+. ++   +.+  .++..+-.+..+.   .+.+...++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~---Ga~--~~~~~~~~~~~~~---~~~~~~~~g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EI---GAD--LVLQISKESPQEI---ARKVEGQLG   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---TCS--EEEECSSCCHHHH---HHHHHHHHT
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-Hh---CCc--ccccccccccccc---cccccccCC
Confidence            4778999986 9999999999999999 7999999987766432 32   222  2222233333333   333333333


Q ss_pred             -CccEEEEcccc
Q 039097           84 -KLDILVNNAGI   94 (290)
Q Consensus        84 -~id~li~~Ag~   94 (290)
                       .+|++|.+.|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence             69999999993

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.27  E-value=0.00014  Score=56.29  Aligned_cols=42  Identities=26%  Similarity=0.260  Sum_probs=37.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      .+.+|||+||+||+|.+.++.....|++|+.+++++++.+..
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            356899999999999999999988999999999998876553

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.27  E-value=0.00047  Score=53.44  Aligned_cols=76  Identities=20%  Similarity=0.221  Sum_probs=57.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.++|+++|.|+ ||.+++++..|.+.+.+|+++.|+.++++...+.+....  .+..+..|-.              ..
T Consensus        15 ~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~--~~~~~~~~~~--------------~~   77 (171)
T d1p77a1          15 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG--NIQAVSMDSI--------------PL   77 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS--CEEEEEGGGC--------------CC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc--ccchhhhccc--------------cc
Confidence            467899999876 777999999999888899999999988888888776543  2444444321              12


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ...|++||+....
T Consensus        78 ~~~diiIN~tp~g   90 (171)
T d1p77a1          78 QTYDLVINATSAG   90 (171)
T ss_dssp             SCCSEEEECCCC-
T ss_pred             cccceeeeccccc
Confidence            4789999998754

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.24  E-value=0.0015  Score=48.92  Aligned_cols=116  Identities=18%  Similarity=0.126  Sum_probs=70.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++.|+||+|.+|.++|..|+.+|.  ++++.+.++.+  .....+.....  ......-+ ...+..+.++       .-
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~--~~a~Dl~~~~~--~~~~~~~~-~~~~~~~~~~-------~a   69 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHIET--RATVKGYL-GPEQLPDCLK-------GC   69 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTSSS--SCEEEEEE-SGGGHHHHHT-------TC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc--hhhHHHhhhhh--hcCCCeEE-cCCChHHHhC-------CC
Confidence            688999999999999999999986  69999987543  22234432221  11111112 2233333333       68


Q ss_pred             cEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           86 DILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      |++|..||....                      +.+.-.+.++.|+.-.-.+.+.+.++   .+.+.|+.+|..
T Consensus        70 DivVitag~~~~----------------------~g~sR~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvtNP  119 (144)
T d1mlda1          70 DVVVIPAGVPRK----------------------PGMTRDDLFNTNATIVATLTAACAQH---CPDAMICIISNP  119 (144)
T ss_dssp             SEEEECCSCCCC----------------------TTCCGGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSC
T ss_pred             CEEEECCCcCCC----------------------CCCCcchHHHHHHHHHHHHHHHHHhc---CCCeEEEEecCc
Confidence            999999996321                      11233456777777666666666433   245677777654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.24  E-value=0.00037  Score=54.13  Aligned_cols=79  Identities=15%  Similarity=0.070  Sum_probs=53.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+|+|.|+ |+||...++.+...|+ +|+++++++++.+.+. ++   +..    ..+|..+++..+++.+.. . -.
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~l---Ga~----~~i~~~~~~~~~~v~~~t-~-g~   95 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FY---GAT----DILNYKNGHIEDQVMKLT-N-GK   95 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HH---TCS----EEECGGGSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hh---Ccc----ccccccchhHHHHHHHHh-h-cc
Confidence            4778999976 8999999999999998 6999999887655433 33   211    234555544333333322 1 12


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus        96 G~D~vid~~g~  106 (174)
T d1jqba2          96 GVDRVIMAGGG  106 (174)
T ss_dssp             CEEEEEECSSC
T ss_pred             CcceEEEccCC
Confidence            59999999994

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00022  Score=55.79  Aligned_cols=41  Identities=29%  Similarity=0.232  Sum_probs=36.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      ++++||+||+||+|...++.....|++|+.++|++++.+.+
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            45899999999999999999999999999999998885543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.19  E-value=0.00041  Score=54.49  Aligned_cols=78  Identities=22%  Similarity=0.256  Sum_probs=51.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEE-EecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVL-TARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +++|||+||+||+|...++.....|+++++ +++++++.....+++   +.+    ...|..+++ +.+.++++..  ..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad----~vi~~~~~~-~~~~~~~~~~--~G  100 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFD----AAVNYKTGN-VAEQLREACP--GG  100 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCS----EEEETTSSC-HHHHHHHHCT--TC
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cce----EEeeccchh-HHHHHHHHhc--cC
Confidence            478999999999999999999989997555 455555444433333   222    334555544 3333333322  36


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      +|+++.+.|
T Consensus       101 vDvv~D~vG  109 (187)
T d1vj1a2         101 VDVYFDNVG  109 (187)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEecCC
Confidence            999999998

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.16  E-value=0.0023  Score=48.47  Aligned_cols=80  Identities=18%  Similarity=0.137  Sum_probs=48.9

Q ss_pred             CCc-EEEEecCCCchhHHHHHHHHHCCC---------eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHH
Q 039097            5 AKR-YAVVTGANKGIGYEVVRQLALNGI---------ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         5 ~~k-~~lITGgs~gIG~aia~~L~~~g~---------~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      +.+ +|.|+||+|.+|..++..|+..+.         +++...++.++++.....+..........+...-.+.    +.
T Consensus         2 ~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~   77 (154)
T d1y7ta1           2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK----VA   77 (154)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----HH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----hh
Confidence            344 899999999999999999998753         2222234444455444444443333333333322221    11


Q ss_pred             HHHHHhhcCCccEEEEccccC
Q 039097           75 ADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~~   95 (290)
                             +...|++|..||..
T Consensus        78 -------~~~advViitaG~~   91 (154)
T d1y7ta1          78 -------FKDADYALLVGAAP   91 (154)
T ss_dssp             -------TTTCSEEEECCCCC
T ss_pred             -------cccccEEEeecCcC
Confidence                   24789999999974

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.0009  Score=50.54  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=59.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      .+++|.|. |.+|..+++.|.++|.+|++.+.++++..+..++...   ..+.++..|.++++.++++-=      .+.|
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~---~~~~vi~Gd~~d~~~L~~a~i------~~a~   73 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---DNADVIPGDSNDSSVLKKAGI------DRCR   73 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---TTCEEEESCTTSHHHHHHHTT------TTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc---CCcEEEEccCcchHHHHHhcc------ccCC
Confidence            46788887 6999999999999999999999998776665555543   248889999999886555422      3678


Q ss_pred             EEEEccc
Q 039097           87 ILVNNAG   93 (290)
Q Consensus        87 ~li~~Ag   93 (290)
                      .+|....
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            8887765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.10  E-value=0.0011  Score=51.24  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+.+.+ +   +..    ...|-.+. +.+.+..+....  
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~-~---Ga~----~~i~~~~~~~~~~~~~~~~~~--   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE-V---GAT----ECVNPQDYKKPIQEVLTEMSN--   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-T---TCS----EEECGGGCSSCHHHHHHHHTT--
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH-h---CCe----eEEecCCchhHHHHHHHHHhc--
Confidence            4779999999 6899999999999986 78888999888665432 2   211    12233222 334444444322  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            479999999994

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.09  E-value=0.0036  Score=47.68  Aligned_cols=76  Identities=17%  Similarity=0.124  Sum_probs=53.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      ..+++.|.|+ |.+|.++|..|+.+|.  ++++.|++++..+....++...   .+........|..+            
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~------------   85 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV------------   85 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG------------
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh------------
Confidence            4567888896 9999999999999996  7999999988776655555442   22232222333322            


Q ss_pred             hhcCCccEEEEccccC
Q 039097           80 SHFGKLDILVNNAGIT   95 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~   95 (290)
                        ...-|++|..||..
T Consensus        86 --~~~adiVVitAg~~   99 (160)
T d1i0za1          86 --TANSKIVVVTAGVR   99 (160)
T ss_dssp             --GTTCSEEEECCSCC
T ss_pred             --cccccEEEEecCCc
Confidence              23679999999964

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.06  E-value=0.0026  Score=48.40  Aligned_cols=76  Identities=13%  Similarity=0.171  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|.|+ |+||...++.+...|++|+++++++.+++.+.    +.+.+    ...|.++.+..+++.+    ..+.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~----~~Ga~----~~i~~~~~~~~~~~~~----~~~g   93 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR----KLGAS----LTVNARQEDPVEAIQR----DIGG   93 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCS----EEEETTTSCHHHHHHH----HHSS
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh----ccCcc----ccccccchhHHHHHHH----hhcC
Confidence            4789999876 99999999999999999999999987755432    22322    2245666554444333    3345


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      .+.+|.+++
T Consensus        94 ~~~~i~~~~  102 (166)
T d1llua2          94 AHGVLVTAV  102 (166)
T ss_dssp             EEEEEECCS
T ss_pred             Ccccccccc
Confidence            666666665

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.04  E-value=0.0017  Score=48.84  Aligned_cols=83  Identities=12%  Similarity=0.129  Sum_probs=54.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +.+-|++.|.||.|-+|.++|+.|.++|+.|.+.+|+.....+....     ...+.+...   ....+...+.++....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-----~~~~v~~~~---~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-----NADVVIVSV---PINLTLETIERLKPYL   77 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-----TCSEEEECS---CGGGHHHHHHHHGGGC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-----hcccccccc---chhhheeeeecccccc
Confidence            44557899999999999999999999999999999987765543221     112333333   3445556666665544


Q ss_pred             CCccEEEEccc
Q 039097           83 GKLDILVNNAG   93 (290)
Q Consensus        83 ~~id~li~~Ag   93 (290)
                      .+=.+++..+.
T Consensus        78 ~~~~iiiD~~S   88 (152)
T d2pv7a2          78 TENMLLADLTS   88 (152)
T ss_dssp             CTTSEEEECCS
T ss_pred             cCCceEEEecc
Confidence            33334554444

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.03  E-value=0.0022  Score=48.85  Aligned_cols=78  Identities=17%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC---CCcEEEEEeeCCCHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG---FDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      .++..++.|.|+ |.+|..+|..|+.+|.  ++++.|++++.++....++.+..   +........|..           
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~-----------   83 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN-----------   83 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG-----------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh-----------
Confidence            355557888886 9999999999999985  79999999887776666665432   222223333332           


Q ss_pred             HHhhcCCccEEEEccccC
Q 039097           78 IRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~   95 (290)
                         ....-|++|..||..
T Consensus        84 ---~~~~adivvitag~~   98 (159)
T d2ldxa1          84 ---VSANSKLVIITAGAR   98 (159)
T ss_dssp             ---GGTTEEEEEECCSCC
T ss_pred             ---hhccccEEEEecccc
Confidence               123689999999964

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.02  E-value=0.00051  Score=54.40  Aligned_cols=80  Identities=16%  Similarity=0.143  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+|+|.|+ |+||...++.+...|+ +|+++++++++++.+. ++   + .  . +..|-.+ +++.+.+.++... .
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~---G-a--~-~~~~~~~-~~~~~~i~~~t~g-~   93 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ---G-F--E-IADLSLD-TPLHEQIAALLGE-P   93 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT---T-C--E-EEETTSS-SCHHHHHHHHHSS-S
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc---c-c--c-EEEeCCC-cCHHHHHHHHhCC-C
Confidence            4789999986 8999988888888887 7888899877655432 22   2 1  1 1223333 3333333333222 3


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      .+|.+|.+.|.-
T Consensus        94 g~D~vid~vG~~  105 (195)
T d1kola2          94 EVDCAVDAVGFE  105 (195)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CcEEEEECcccc
Confidence            699999999853

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.0015  Score=50.13  Aligned_cols=74  Identities=18%  Similarity=0.265  Sum_probs=53.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+|+|.|+ |+||...++.+...|++++++++++++.+. .+++   +.+    ..+|..+.+...       ...++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~-a~~l---Gad----~~i~~~~~~~~~-------~~~~~   93 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREA-AKAL---GAD----EVVNSRNADEMA-------AHLKS   93 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHH---TCS----EEEETTCHHHHH-------TTTTC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHH-Hhcc---CCc----EEEECchhhHHH-------HhcCC
Confidence            4789999986 899999999999999999999998877543 3343   322    224555554322       22247


Q ss_pred             ccEEEEcccc
Q 039097           85 LDILVNNAGI   94 (290)
Q Consensus        85 id~li~~Ag~   94 (290)
                      +|++|.+.|.
T Consensus        94 ~D~vid~~g~  103 (168)
T d1uufa2          94 FDFILNTVAA  103 (168)
T ss_dssp             EEEEEECCSS
T ss_pred             Cceeeeeeec
Confidence            9999999984

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.96  E-value=0.0038  Score=46.78  Aligned_cols=74  Identities=16%  Similarity=0.133  Sum_probs=51.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++.|.|+ |.+|..+|..|+.+|.  ++++.|+++++++....++.+.   ..........|.   +           .
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~-----------~   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---A-----------A   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---G-----------G
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---H-----------H
Confidence            66778885 9999999999999984  7999999988776555555432   222233333332   2           1


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      ...-|++|..||..
T Consensus        67 l~~adiVVitaG~~   80 (146)
T d1hyha1          67 LADADVVISTLGNI   80 (146)
T ss_dssp             GTTCSEEEECCSCG
T ss_pred             hccccEEEEecccc
Confidence            23679999999964

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.95  E-value=0.0016  Score=46.54  Aligned_cols=40  Identities=15%  Similarity=0.132  Sum_probs=34.9

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      -+++||+++|.||+. +|..-++.|++.|++|++.+....+
T Consensus         8 l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~~   47 (113)
T d1pjqa1           8 CQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFIP   47 (113)
T ss_dssp             ECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred             EEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCCh
Confidence            378999999999865 9999999999999999998876543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.95  E-value=0.0012  Score=50.89  Aligned_cols=78  Identities=15%  Similarity=0.138  Sum_probs=51.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeE-EEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIIT-VLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~V-i~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+++|.|+ |+||...++.+...|+++ +++++++.+++.+ +++   +..  +  .+|..+++ +.+.+.++..  +
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~---Ga~--~--~i~~~~~~-~~~~i~~~t~--g   95 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL---GAT--H--VINSKTQD-PVAAIKEITD--G   95 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH---TCS--E--EEETTTSC-HHHHHHHHTT--S
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHH-HHc---CCe--E--EEeCCCcC-HHHHHHHHcC--C
Confidence            4778999987 899999999999899865 5567776654443 233   222  2  24555543 3333333322  4


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++|.+.|.
T Consensus        96 g~D~vid~~G~  106 (174)
T d1f8fa2          96 GVNFALESTGS  106 (174)
T ss_dssp             CEEEEEECSCC
T ss_pred             CCcEEEEcCCc
Confidence            79999999993

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.00048  Score=47.63  Aligned_cols=39  Identities=15%  Similarity=0.185  Sum_probs=34.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ++++||+++|.|. |.-|+++|+.|.++|++|++.+.+..
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            4789999999998 56799999999999999999998654

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.89  E-value=0.0027  Score=49.03  Aligned_cols=79  Identities=15%  Similarity=0.158  Sum_probs=52.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (290)
                      .|.+|+|.| .|+||...++.+...|+ .|+++++++++++- .+++   +..  .  .+|.... +.+.+..+...  -
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~-a~~~---Ga~--~--~i~~~~~~~~~~~~~~~~~--~   96 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPK-AKAL---GAT--D--CLNPRELDKPVQDVITELT--A   96 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHT---TCS--E--EECGGGCSSCHHHHHHHHH--T
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHH-HHHh---CCC--c--ccCCccchhhhhhhHhhhh--c
Confidence            478999996 59999999999999998 57788888877543 3333   222  1  1333222 23333343332  2


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus        97 ~G~d~vie~~G~  108 (174)
T d1e3ia2          97 GGVDYSLDCAGT  108 (174)
T ss_dssp             SCBSEEEESSCC
T ss_pred             CCCcEEEEeccc
Confidence            489999999994

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.87  E-value=0.00069  Score=51.01  Aligned_cols=75  Identities=15%  Similarity=0.140  Sum_probs=48.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCccc--HHHHHHHHHh---cCCCcEE--EEEeeCCCHHHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKG--GLEAVEKLKH---SGFDNVI--FHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~--~~~~~~~l~~---~~~~~~~--~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++.|.||+|.+|.++|..|+.++.  ++++.+++++.  ++....++..   .....+.  +...+  +.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence            489999999999999999999994  89999988643  3333334433   1222222  22221  11          


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                       +....-|++|.+||..
T Consensus        70 -~~l~~aDvVVitAG~~   85 (145)
T d1hyea1          70 -RIIDESDVVIITSGVP   85 (145)
T ss_dssp             -GGGTTCSEEEECCSCC
T ss_pred             -HHhccceEEEEecccc
Confidence             1123689999999963

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.83  E-value=0.0018  Score=50.18  Aligned_cols=79  Identities=16%  Similarity=0.141  Sum_probs=53.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHH-HHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA-IHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~   82 (290)
                      .|.+++|+|+ ||+|...++.+...|+ +|+++++++++++-+.+-    +.+    ..+|-.+.+. .+...+.. . -
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~----GA~----~~in~~~~~~~~~~~~~~~-~-g   97 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV----GAT----ECISPKDSTKPISEVLSEM-T-G   97 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH----TCS----EEECGGGCSSCHHHHHHHH-H-T
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc----CCc----EEECccccchHHHHHHHHh-c-c
Confidence            4789999986 9999999999999996 799999999987754432    211    1223333322 22222222 1 2


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      ..+|++|.+.|.
T Consensus        98 ~G~d~vi~~~g~  109 (176)
T d1d1ta2          98 NNVGYTFEVIGH  109 (176)
T ss_dssp             SCCCEEEECSCC
T ss_pred             ccceEEEEeCCc
Confidence            379999999994

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.82  E-value=0.0012  Score=50.04  Aligned_cols=78  Identities=19%  Similarity=0.082  Sum_probs=51.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +.+++.|.|+ |.+|..+|..|+..+. ++++.|.+++.++.....+...   .+........  .+.   ++.+     
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~-----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAAL-----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhh-----
Confidence            3557777897 9999999999999885 8999999988777655555432   1111111111  111   1122     


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                        ..-|++|..||..
T Consensus        75 --~~adiVvitag~~   87 (154)
T d1pzga1          75 --TGADCVIVTAGLT   87 (154)
T ss_dssp             --TTCSEEEECCSCS
T ss_pred             --cCCCeEEEecccc
Confidence              2679999999975

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.81  E-value=0.013  Score=45.19  Aligned_cols=77  Identities=17%  Similarity=0.107  Sum_probs=45.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCcc--cHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEK--GGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +|.||||+|.||+.++.+|++...       .+.+.+....  .++...-++..........+.. -++..   +     
T Consensus        26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~---~-----   96 (175)
T d7mdha1          26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPY---E-----   96 (175)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHH---H-----
T ss_pred             EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccch---h-----
Confidence            699999999999999999997532       4445555432  2333333444333222222211 11211   1     


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                        .+...|++|..+|..
T Consensus        97 --~~~~aDvVvi~ag~~  111 (175)
T d7mdha1          97 --VFEDVDWALLIGAKP  111 (175)
T ss_dssp             --HTTTCSEEEECCCCC
T ss_pred             --hccCCceEEEeeccC
Confidence              234789999999974

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.80  E-value=0.0093  Score=44.32  Aligned_cols=112  Identities=18%  Similarity=0.128  Sum_probs=67.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCc--ccHHHHHHHHHh--cCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDE--KGGLEAVEKLKH--SGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~--~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++.|.||+|.+|.++|..|+.++.  ++++.+.+.  +..+....++.+  .......+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            578999999999999999999986  699988643  333333334432  1222334333332   21           


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCC-CCeEEEEcC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSD-SARIVNVSS  159 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~-~~~iV~isS  159 (290)
                      ...-|++|..||... .                     +.++-.+.++.|.-    +.+.+.+.+++.. .+.++.+|-
T Consensus        68 ~~~aDiVvitaG~~~-~---------------------~g~~R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtN  120 (142)
T d1o6za1          68 TAGSDVVVITAGIPR-Q---------------------PGQTRIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSN  120 (142)
T ss_dssp             GTTCSEEEECCCCCC-C---------------------TTCCHHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCS
T ss_pred             hhhcCEEEEeccccc-c---------------------cCCchhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecC
Confidence            236899999999632 1                     11234456666654    4455555556554 355555543

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.78  E-value=0.0098  Score=44.35  Aligned_cols=116  Identities=16%  Similarity=0.047  Sum_probs=67.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-C--CeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-G--IITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-g--~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++.|+|++|.+|.++|..|+.+ +  .++++.+..+ ..+....++..............-.+.+    .++       .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~----~~~-------~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP----ALE-------G   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH----HHT-------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc----ccC-------C
Confidence            5789999999999999988754 4  5899999864 4444444555433211111112222222    122       4


Q ss_pred             ccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccCCCCeEEEEcCC
Q 039097           85 LDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLSDSARIVNVSSS  160 (290)
Q Consensus        85 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~~~~~iV~isS~  160 (290)
                      -|++|..||....                      +.++-.+.++.|.--.-.+.+.+.++   .+.+.+|.+|..
T Consensus        70 aDvvvitaG~~~k----------------------~g~~R~dl~~~N~~i~~~v~~~i~~~---~p~aivivvtNP  120 (145)
T d2cmda1          70 ADVVLISAGVRRK----------------------PGMDRSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNP  120 (145)
T ss_dssp             CSEEEECCSCCCC----------------------TTCCGGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSS
T ss_pred             CCEEEECCCccCC----------------------CCcchhhHHHHHHHHHHHHHHHHHhh---CCCcEEEEccCC
Confidence            6999999996421                      11233456677755555555555332   244667777654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.78  E-value=0.0022  Score=48.79  Aligned_cols=41  Identities=17%  Similarity=0.176  Sum_probs=34.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEA   46 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~   46 (290)
                      .|.+++|.|+ |+||...++.+...|++|+++++++++.+..
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~   67 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA   67 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence            4778999865 9999999999999999999999988776543

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.72  E-value=0.0024  Score=49.03  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=51.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCC-HHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVAD-PAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (290)
                      .|.+|+|.|+ ||+|...++.+...|+ .|+++++++++.+. .+++   +.+  .  ..|..+ .+.+.+..++..  -
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~-ak~l---Ga~--~--~i~~~~~~~~~~~~~~~~~--~   96 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR-AKEF---GAT--E--CINPQDFSKPIQEVLIEMT--D   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH-HHHH---TCS--E--EECGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH-HHHh---CCc--E--EEeCCchhhHHHHHHHHHc--C
Confidence            4789999987 5999999999999997 56666777766543 3344   222  1  223332 234444444432  2


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.+.|.
T Consensus        97 ~g~D~vid~~G~  108 (176)
T d2fzwa2          97 GGVDYSFECIGN  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEeeecCCC
Confidence            479999999983

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.68  E-value=0.0045  Score=46.11  Aligned_cols=74  Identities=18%  Similarity=0.154  Sum_probs=47.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcCC--CcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSGF--DNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++.|.|+ |.+|.++|..|+.++.  ++++.|++++.++....++.+...  ........|   .+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------Hh
Confidence            35666686 9999999999999985  799999998876665556654321  122222221   11           12


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||..
T Consensus        67 ~~adivvitag~~   79 (142)
T d1y6ja1          67 KDCDVIVVTAGAN   79 (142)
T ss_dssp             TTCSEEEECCCC-
T ss_pred             CCCceEEEecccc
Confidence            3679999999964

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.66  E-value=0.003  Score=48.68  Aligned_cols=79  Identities=23%  Similarity=0.212  Sum_probs=53.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHH-HHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA-IHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~   82 (290)
                      .|.+|+|.|+ |++|...++.+...|+ +|+++++++++++.+.+ +   +..    ..+|.++.+. +.+..+...  -
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-l---Ga~----~~i~~~~~d~~~~~~~~~~~--~   95 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-L---GAT----ECLNPKDYDKPIYEVICEKT--N   95 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-T---TCS----EEECGGGCSSCHHHHHHHHT--T
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-c---CCc----EEEcCCCchhHHHHHHHHhc--C
Confidence            4789999985 8999999999999997 78899999888765432 2   222    1234443332 233333221  2


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.++|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            479999999984

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.63  E-value=0.0015  Score=50.12  Aligned_cols=76  Identities=20%  Similarity=0.266  Sum_probs=51.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++++.+. ++   +.+  .+  .|-.+....   .+   ...+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~--~~--i~~~~~~~~---~~---~~~~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GAD--HY--IATLEEGDW---GE---KYFDT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCS--EE--EEGGGTSCH---HH---HSCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCc--EE--eeccchHHH---HH---hhhcc
Confidence            4789999986 89999999988888999999999988776543 33   222  11  233222221   11   22347


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|++|.+.+..
T Consensus        92 ~d~vi~~~~~~  102 (168)
T d1piwa2          92 FDLIVVCASSL  102 (168)
T ss_dssp             EEEEEECCSCS
T ss_pred             cceEEEEecCC
Confidence            89999987753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.62  E-value=0.0077  Score=45.60  Aligned_cols=81  Identities=19%  Similarity=0.125  Sum_probs=54.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH---------hcCCCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK---------HSGFDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~---------~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      +.|. |.|-+|.++|+.|.++|++|++.+|+++..+++.+.-.         ......+.++.+   ..+.+.++++++.
T Consensus         3 I~iI-G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVV-GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEE-eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            5555 45999999999999999999999999877665443210         001123333322   3577888899887


Q ss_pred             hhcCCccEEEEccc
Q 039097           80 SHFGKLDILVNNAG   93 (290)
Q Consensus        80 ~~~~~id~li~~Ag   93 (290)
                      ....+=.+++..++
T Consensus        79 ~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          79 PHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGSCTTCEEEECCS
T ss_pred             hhcccccceeeccc
Confidence            76655556666654

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0019  Score=50.76  Aligned_cols=47  Identities=17%  Similarity=0.164  Sum_probs=40.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK   51 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~   51 (290)
                      |.=|++.|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+.
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~   48 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE   48 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence            44578899998 779999999999999999999999988776665553

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.53  E-value=0.016  Score=43.00  Aligned_cols=112  Identities=21%  Similarity=0.105  Sum_probs=65.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---CCCcEEEEE-eeCCCHHHHHHHHHHHHhh
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQ-LDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~   81 (290)
                      |++.|.|+ |.+|.++|..|+.++. ++++.+.+++..+.....+...   .+....+.. -|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            46667786 9999999999999985 8999999988766555555322   111222221 22222              


Q ss_pred             cCCccEEEEccccCCCCCCCCcccchhhhcccccccccChHHHHHhhhcccchHHHHHHHhchhhccC-CCCeEEEEcC
Q 039097           82 FGKLDILVNNAGITGISSDADTLSGFIEEGVARGKMTQTYESAEKCLQTNYLGAKRMCEALIPLLQLS-DSARIVNVSS  159 (290)
Q Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vNv~~~~~l~~~~~~~l~~~-~~~~iV~isS  159 (290)
                      ...-|++|.+||....                      ..+.-.+.+..|+    .+.+.+.+.+.+. +.+.++.+|-
T Consensus        67 ~~~advvvitag~~~~----------------------~~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvtN  119 (142)
T d1uxja1          67 TANSDVIVVTSGAPRK----------------------PGMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVNN  119 (142)
T ss_dssp             GTTCSEEEECCSCC-------------------------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECSS
T ss_pred             hcCCCEEEEeeeccCC----------------------cCcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeCC
Confidence            1257999999996421                      1122334455554    4555666655654 4455555544

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.47  E-value=0.023  Score=42.08  Aligned_cols=73  Identities=23%  Similarity=0.140  Sum_probs=49.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|.|+ |.+|.++|..|+.+|.  ++++.|+++++.+....++...   .+........|..+       +       
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~-------~-------   67 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEI-------C-------   67 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGG-------G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHH-------h-------
Confidence            4566686 9999999999999986  7999999988776555555432   22222112222221       1       


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||..
T Consensus        68 ~daDvVVitaG~~   80 (143)
T d1llda1          68 RDADMVVITAGPR   80 (143)
T ss_dssp             TTCSEEEECCCCC
T ss_pred             hCCcEEEEecccc
Confidence            2579999999964

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.44  E-value=0.014  Score=43.11  Aligned_cols=73  Identities=21%  Similarity=0.207  Sum_probs=49.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ++.|.|+ |.+|.++|..|+.++.  ++++.|+++++++....++....  .........|.   ++           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---AD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---GG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---HH-----------hc
Confidence            4567786 8999999999999984  79999999887775555544321  12233333332   21           23


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      .-|++|..||..
T Consensus        67 ~adivvitag~~   78 (140)
T d1a5za1          67 GSDVVIVAAGVP   78 (140)
T ss_dssp             TCSEEEECCCCC
T ss_pred             CCCEEEEecccc
Confidence            679999999964

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.38  E-value=0.0098  Score=44.96  Aligned_cols=84  Identities=11%  Similarity=0.069  Sum_probs=52.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC------CcEEEEEeeCCCHHHHHHHH---HHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF------DNVIFHQLDVADPAAIHSVA---DFIR   79 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~v~~~~---~~~~   79 (290)
                      +-|. |-|-+|.++|++|+++|++|++.+|++++.++..+.-.....      ....++..=|.+.+.+++++   +.+.
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            3444 569999999999999999999999998876665432211110      12334444566777777766   2333


Q ss_pred             hhcCCccEEEEccc
Q 039097           80 SHFGKLDILVNNAG   93 (290)
Q Consensus        80 ~~~~~id~li~~Ag   93 (290)
                      ....+=.++|....
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            33333345555444

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.38  E-value=0.0086  Score=45.72  Aligned_cols=78  Identities=18%  Similarity=0.219  Sum_probs=50.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+++|.|+ |++|...++.+...|+ +|+++++++++++...    +.+..  .  ..|-. .+.+++..+...  -.
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~--~--~i~~~-~~~~~~~~~~~~--~~   99 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGAD--H--VVDAR-RDPVKQVMELTR--GR   99 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCS--E--EEETT-SCHHHHHHHHTT--TC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccc--e--eecCc-ccHHHHHHHhhC--CC
Confidence            4788999885 9999999999988886 6777788876544332    22322  1  23333 334444443221  13


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      .+|++|.++|.
T Consensus       100 g~d~vid~~g~  110 (172)
T d1h2ba2         100 GVNVAMDFVGS  110 (172)
T ss_dssp             CEEEEEESSCC
T ss_pred             CceEEEEecCc
Confidence            69999999994

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.37  E-value=0.032  Score=41.12  Aligned_cols=74  Identities=23%  Similarity=0.165  Sum_probs=49.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.|+|+ |.+|.+++..|+..|.  ++++.|++++.++.....+...   ......+...  .+.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4667786 9999999999999984  8999999988776554444322   1222333322  22221           2


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ...|++|..||..
T Consensus        68 ~dadvvvitag~~   80 (142)
T d1guza1          68 ANSDIVIITAGLP   80 (142)
T ss_dssp             TTCSEEEECCSCC
T ss_pred             cCCeEEEEEEecC
Confidence            3679999999963

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.37  E-value=0.033  Score=41.60  Aligned_cols=75  Identities=16%  Similarity=0.165  Sum_probs=50.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc---CCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++.|.|+ |.+|.++|..|+.++. ++++.|++++..+.....+...   .+.+..+...+  +.           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-----------ccc
Confidence            46777785 9999999998888885 7999999988777655555432   12223333322  11           122


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      ..-|++|..||..
T Consensus        70 ~~advvvitag~~   82 (150)
T d1t2da1          70 AGADVVIVTAGFT   82 (150)
T ss_dssp             TTCSEEEECCSCS
T ss_pred             CCCcEEEEecccc
Confidence            3689999999964

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.31  E-value=0.0028  Score=48.79  Aligned_cols=42  Identities=21%  Similarity=0.117  Sum_probs=36.2

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHH
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVE   48 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~   48 (290)
                      .|++.|.|+ |.+|.++|..|+++|+.|.+.+|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            478889988 999999999999999999999999876655443

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.25  E-value=0.013  Score=45.00  Aligned_cols=85  Identities=11%  Similarity=0.061  Sum_probs=60.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH---------------hcCCCcEEEEEeeCCCHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK---------------HSGFDNVIFHQLDVADPAAIH   72 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~---------------~~~~~~~~~~~~Dl~~~~~v~   72 (290)
                      .+-|.|- |-+|.++|++|+++|++|++.+|++++.++..++-.               ... .....+...+.+.+.+.
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~-~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL-KKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB-CSSCEEEECSCTTHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh-cccceEEEecCchHHHH
Confidence            3455554 899999999999999999999999988776654311               111 12345555677788888


Q ss_pred             HHHHHHHhhcCCccEEEEcccc
Q 039097           73 SVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        73 ~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      ++.+.+.....+=+++|...-.
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHhccccCcEEEecCcc
Confidence            8888887766555666666543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.14  E-value=0.0024  Score=49.90  Aligned_cols=44  Identities=23%  Similarity=0.233  Sum_probs=38.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK   51 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~   51 (290)
                      |++.|.|+ |-+|..+|..|+..|++|++.+++++.++...+.+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~   48 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA   48 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence            56888888 789999999999999999999999988777666553

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.14  E-value=0.0033  Score=48.16  Aligned_cols=45  Identities=22%  Similarity=0.265  Sum_probs=38.2

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l   50 (290)
                      ++|+|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+...+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5778999977 8999999999999997 7999999988777665544

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.11  E-value=0.0067  Score=44.30  Aligned_cols=74  Identities=16%  Similarity=0.271  Sum_probs=56.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEE-ecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLT-ARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      ++.|.|++|-.|+++++.+.++|+.++.. +++....      +  ...+    +..|++.++.+.+.++.+.+.  ++-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D----VvIDFS~p~~~~~~l~~~~~~--~~p   67 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD----VVIDFSSPEALPKTVDLCKKY--RAG   67 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS----EEEECSCGGGHHHHHHHHHHH--TCE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC----EEEEecCHHHHHHHHHHHHhc--CCC
Confidence            58999999999999999999999986644 4443221      0  0112    567999999999999998876  677


Q ss_pred             EEEEccccC
Q 039097           87 ILVNNAGIT   95 (290)
Q Consensus        87 ~li~~Ag~~   95 (290)
                      +|+-..|+.
T Consensus        68 ~ViGTTG~~   76 (128)
T d1vm6a3          68 LVLGTTALK   76 (128)
T ss_dssp             EEECCCSCC
T ss_pred             EEEEcCCCC
Confidence            888888863

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.02  E-value=0.029  Score=42.23  Aligned_cols=85  Identities=7%  Similarity=-0.022  Sum_probs=52.1

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC------CcEEEEEeeCCCHHHHHHHHHH---
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF------DNVIFHQLDVADPAAIHSVADF---   77 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~------~~~~~~~~Dl~~~~~v~~~~~~---   77 (290)
                      |+.+|  |.|-+|.++|++|+++|++|.+.+|++.+.+.....-.....      ....++..=+.+.+.++.++..   
T Consensus         3 kIg~I--GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           3 QIAFI--GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             EEEEE--CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             EEEEE--EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            44444  679999999999999999999999998776554322111000      1234455556677777776553   


Q ss_pred             HHhhcCCccEEEEccc
Q 039097           78 IRSHFGKLDILVNNAG   93 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag   93 (290)
                      +.....+=+++|....
T Consensus        81 ~~~~l~~g~iiid~st   96 (162)
T d3cuma2          81 LLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHSCTTCEEEECSC
T ss_pred             ccccCCCCCEEEECCC
Confidence            2333222345554444

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.96  E-value=0.006  Score=48.19  Aligned_cols=43  Identities=14%  Similarity=0.105  Sum_probs=37.7

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      .+++||+++|-| -|.+|..+|+.|.+.|++|++.+.+......
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            468999999997 7889999999999999999999988766544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.93  E-value=0.0048  Score=47.61  Aligned_cols=49  Identities=16%  Similarity=0.236  Sum_probs=41.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS   53 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~   53 (290)
                      ++++|.|+|.|+ ||.+++++..|.+.| +|.++.|+.++.++..+.+...
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            578999999976 678999999997766 9999999999988887777543

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.92  E-value=0.063  Score=39.54  Aligned_cols=73  Identities=19%  Similarity=0.067  Sum_probs=49.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHhc---CCCcEEEEE-eeCCCHHHHHHHHHHHHhh
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKHS---GFDNVIFHQ-LDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~~---~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++.|.|+ |.+|.++|..|+.+|.  ++++.|++++..+....++.+.   ......+.. -|..+              
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL--------------   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG--------------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH--------------
Confidence            4667786 9999999999999985  6999999988776555555432   222223332 23221              


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      ...-|++|..||..
T Consensus        67 ~~~adiVvitag~~   80 (142)
T d1ojua1          67 LKGSEIIVVTAGLA   80 (142)
T ss_dssp             GTTCSEEEECCCCC
T ss_pred             hccccEEEEecccc
Confidence            23579999999953

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.79  E-value=0.028  Score=41.19  Aligned_cols=76  Identities=17%  Similarity=0.260  Sum_probs=55.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCeEEE-EecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALN-GIITVL-TARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~-g~~Vi~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++.|.|++|-+|+++++.+.+. ++.++. +++... ..    .+.....+    +..|++.++.+.+.++.+.+.  ++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~----~~~~~~~D----vvIDFS~p~~~~~~~~~~~~~--~~   69 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LS----LLTDGNTE----VVIDFTHPDVVMGNLEFLIDN--GI   69 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-TH----HHHTTTCS----EEEECCCTTTHHHHHHHHHHT--TC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hh----hhccccCC----EEEEcccHHHHHHHHHHHHhc--CC
Confidence            5889999999999999998775 566554 344322 22    12222222    679999999999999988876  67


Q ss_pred             cEEEEcccc
Q 039097           86 DILVNNAGI   94 (290)
Q Consensus        86 d~li~~Ag~   94 (290)
                      -+||-..|+
T Consensus        70 ~~ViGTTG~   78 (135)
T d1yl7a1          70 HAVVGTTGF   78 (135)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEecccc
Confidence            788877776

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.78  E-value=0.016  Score=44.14  Aligned_cols=79  Identities=16%  Similarity=0.162  Sum_probs=50.6

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHH-HHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAA-IHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~   82 (290)
                      .|.+++|.|+ |++|...+..+...|. +|+++++++++++.+. ++   +.+    ..+|..+++. +++..+....  
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~---GAd----~~in~~~~~~~~~~~~~~~~~--   96 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF---GAT----DFVNPNDHSEPISQVLSKMTN--   96 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT---TCC----EEECGGGCSSCHHHHHHHHHT--
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-Hc---CCc----EEEcCCCcchhHHHHHHhhcc--
Confidence            4779999985 6788888888888876 6888899988765433 22   322    2234443332 2333333222  


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      +.+|++|.+.|.
T Consensus        97 ~G~d~vid~~G~  108 (175)
T d1cdoa2          97 GGVDFSLECVGN  108 (175)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCcceeeeecCC
Confidence            479999999994

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.77  E-value=0.031  Score=39.48  Aligned_cols=71  Identities=18%  Similarity=0.217  Sum_probs=55.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .+.++.|.| +|-+|+-++....+.|++|++.+.+++.-..   ++      .-.++..|..|.+.+.++.+..     .
T Consensus        10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~---~v------a~~~i~~~~~d~~~l~~~~~~~-----~   74 (111)
T d1kjqa2          10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM---HV------AHRSHVINMLDGDALRRVVELE-----K   74 (111)
T ss_dssp             TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG---GG------SSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh---hc------CCeEEECCCCCHHHHHHHHHhh-----C
Confidence            356799998 6789999999999999999999988654221   11      1356789999999999988764     6


Q ss_pred             ccEEEE
Q 039097           85 LDILVN   90 (290)
Q Consensus        85 id~li~   90 (290)
                      +|++.+
T Consensus        75 ~DviT~   80 (111)
T d1kjqa2          75 PHYIVP   80 (111)
T ss_dssp             CSEEEE
T ss_pred             CceEEE
Confidence            788754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.019  Score=47.83  Aligned_cols=24  Identities=13%  Similarity=0.065  Sum_probs=20.7

Q ss_pred             CchhHHHHHHHHHCCCeEEEEecC
Q 039097           16 KGIGYEVVRQLALNGIITVLTARD   39 (290)
Q Consensus        16 ~gIG~aia~~L~~~g~~Vi~~~r~   39 (290)
                      |..|.++|+.|..+|+.|+++.+.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            446999999999999999998654

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.72  E-value=0.016  Score=43.44  Aligned_cols=77  Identities=18%  Similarity=0.191  Sum_probs=44.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------eEEEEecCccc--HHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-------ITVLTARDEKG--GLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-------~Vi~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      +|.|+||+|.+|+++|..|+..+.       .+++.+.+...  ++....++..........  ...++..  .+.    
T Consensus         5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~--~~~----   76 (154)
T d5mdha1           5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD--VIATDKE--EIA----   76 (154)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE--EEEESCH--HHH----
T ss_pred             EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccc--cccCccc--ccc----
Confidence            789999999999999999997653       35555554332  222222223222222222  2222211  112    


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                         +...|++|..+|..
T Consensus        77 ---~~~~dvVVitag~~   90 (154)
T d5mdha1          77 ---FKDLDVAILVGSMP   90 (154)
T ss_dssp             ---TTTCSEEEECCSCC
T ss_pred             ---cCCceEEEEecccC
Confidence               23689999999974

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.67  E-value=0.0043  Score=46.49  Aligned_cols=36  Identities=17%  Similarity=0.283  Sum_probs=32.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~   39 (290)
                      +++||++||.|| |.+|..-|+.|++.|++|++++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            578999999999 569999999999999999999754

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.48  E-value=0.014  Score=45.21  Aligned_cols=40  Identities=23%  Similarity=0.120  Sum_probs=34.3

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG   43 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~   43 (290)
                      ++.+|++.|.| .|.||+++|+.+..-|++|+..++...+.
T Consensus        41 ~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~   80 (184)
T d1ygya1          41 EIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPA   80 (184)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred             cccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChh
Confidence            46788888887 68999999999999999999999876543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=95.43  E-value=0.076  Score=44.58  Aligned_cols=83  Identities=16%  Similarity=0.081  Sum_probs=57.7

Q ss_pred             cCCCcEEEEecCC-CchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            3 ETAKRYAVVTGAN-KGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         3 ~~~~k~~lITGgs-~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ..+|++||=.++. |+++.++    +..+.+|+.++.++..++.+.+..+..+-+++.++..|..+.      .+.+...
T Consensus       143 ~~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~  212 (318)
T d1wxxa2         143 RFRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKE  212 (318)
T ss_dssp             GCCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHT
T ss_pred             HhCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhh
Confidence            3567777766555 5555443    345679999999999888888777766655788888887553      3333334


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                      -.+.|.||.++-..
T Consensus       213 ~~~fD~Vi~DpP~~  226 (318)
T d1wxxa2         213 GERFDLVVLDPPAF  226 (318)
T ss_dssp             TCCEEEEEECCCCS
T ss_pred             hcCCCEEEEcCCcc
Confidence            45899999998654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.32  E-value=0.1  Score=39.12  Aligned_cols=83  Identities=8%  Similarity=0.031  Sum_probs=53.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--eEEEEecCcccHHHHHHHHHh-c----------CCCcEEEEEeeCCCHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI--ITVLTARDEKGGLEAVEKLKH-S----------GFDNVIFHQLDVADPAAIHSV   74 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~~~~~~~~~~l~~-~----------~~~~~~~~~~Dl~~~~~v~~~   74 (290)
                      +++|.| .|-||.++|+.|.+.|+  +|+..+|+++..+.+.+.-.- .          ....+.++   ..-.+.+.++
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil---a~p~~~~~~v   78 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML---SSPVRTFREI   78 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE---CSCHHHHHHH
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc---cCCchhhhhh
Confidence            477776 59999999999999996  688889997776655443110 0          00112221   1345678888


Q ss_pred             HHHHHhhcCCccEEEEcccc
Q 039097           75 ADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        75 ~~~~~~~~~~id~li~~Ag~   94 (290)
                      ++++......=.+++..++.
T Consensus        79 l~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          79 AKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhccccccccccccccc
Confidence            88887766555566666654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.30  E-value=0.046  Score=44.01  Aligned_cols=36  Identities=22%  Similarity=0.300  Sum_probs=30.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++++|+|.| .||+|..+++.|+..|. ++.++|.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            35678999999 78899999999999998 78888743

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.30  E-value=0.0087  Score=43.42  Aligned_cols=71  Identities=20%  Similarity=0.211  Sum_probs=50.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      |+++|.|. |.+|..+++.|  +|.+|++++.+++..+...+    .   .+.++.+|.++++.++++      ...+.+
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~----~---~~~~i~Gd~~~~~~L~~a------~i~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR----S---GANFVHGDPTRVSDLEKA------NVRGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH----T---TCEEEESCTTSHHHHHHT------TCTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh----c---CccccccccCCHHHHHHh------hhhcCc
Confidence            56788875 77999999999  46677888888776554322    1   378889999998876553      123667


Q ss_pred             EEEEccc
Q 039097           87 ILVNNAG   93 (290)
Q Consensus        87 ~li~~Ag   93 (290)
                      .+|....
T Consensus        65 ~vi~~~~   71 (129)
T d2fy8a1          65 AVIVNLE   71 (129)
T ss_dssp             EEEECCS
T ss_pred             EEEEecc
Confidence            7776543

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.12  E-value=0.033  Score=43.44  Aligned_cols=39  Identities=10%  Similarity=0.012  Sum_probs=34.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      ++.||++.|.| -|.||+.+|+.|..-|++|+..++....
T Consensus        46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             eeeCceEEEec-cccccccceeeeeccccceeeccCcccc
Confidence            57899999995 6889999999999999999999987654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.11  E-value=0.077  Score=40.26  Aligned_cols=79  Identities=20%  Similarity=0.171  Sum_probs=51.6

Q ss_pred             CCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-----------------CcEEEEEeeCCCHHHHHHHHH
Q 039097           14 ANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-----------------DNVIFHQLDVADPAAIHSVAD   76 (290)
Q Consensus        14 gs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-----------------~~~~~~~~Dl~~~~~v~~~~~   76 (290)
                      |.|-+|.++|++|+++|++|++.+|++++.++..++-.....                 .....+..-+.....+...++
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            778999999999999999999999999887776655321110                 012233333455556666666


Q ss_pred             HHHhhcCCccEEEEcc
Q 039097           77 FIRSHFGKLDILVNNA   92 (290)
Q Consensus        77 ~~~~~~~~id~li~~A   92 (290)
                      .+...+..=+++|...
T Consensus        88 ~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          88 QLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHCCTTCEEEECC
T ss_pred             hhhhhccccceecccC
Confidence            6655544444555544

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.03  E-value=0.015  Score=51.27  Aligned_cols=35  Identities=31%  Similarity=0.489  Sum_probs=29.5

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      +++.+|||.|+ ||||.++++.|+..|. ++.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            34568999998 6799999999999998 78888754

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.92  E-value=0.015  Score=43.59  Aligned_cols=35  Identities=17%  Similarity=0.010  Sum_probs=31.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGG   43 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~   43 (290)
                      +++|.|+ |.||..++..|++.|+.|.+.+|++...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5788888 9999999999999999999999987643

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.88  E-value=0.03  Score=42.52  Aligned_cols=40  Identities=35%  Similarity=0.352  Sum_probs=36.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      ++.||+++|.|-|.-+|+-++..|.++|+.|.++.+....
T Consensus        34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~   73 (166)
T d1b0aa1          34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN   73 (166)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             ccccceEEEEeccccccHHHHHHHHHhhccccccccccch
Confidence            5789999999999999999999999999999988766544

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.84  E-value=0.27  Score=37.99  Aligned_cols=28  Identities=18%  Similarity=0.097  Sum_probs=23.4

Q ss_pred             hhhHHHHHHHHHHHHhhCCCeEEEEeec
Q 039097          216 ILSKAAMNAYTRILAKKYPNFCINCVCP  243 (290)
Q Consensus       216 ~~sKaa~~~~~~~la~e~~~i~vn~v~P  243 (290)
                      ....+++.+|.|+++.|+|++++..|..
T Consensus       139 ~p~~A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         139 NAAHGALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             CGGGHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             CHhHHhHHHHHHHHHHhCCCceEEEEEC
Confidence            3467899999999999999988876663

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.73  E-value=0.046  Score=42.46  Aligned_cols=71  Identities=10%  Similarity=0.022  Sum_probs=48.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++.||++.|.|. |.||+.+|+++..-|++|+..++............              ....+++++++++     
T Consensus        44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~--------------~~~~~~l~~ll~~-----  103 (191)
T d1gdha1          44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ--------------ATFHDSLDSLLSV-----  103 (191)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT--------------CEECSSHHHHHHH-----
T ss_pred             eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc--------------ccccCCHHHHHhh-----
Confidence            467899998864 78999999999999999999998765433322110              1111345556663     


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                        -|+|+......
T Consensus       104 --sD~v~l~~plt  114 (191)
T d1gdha1         104 --SQFFSLNAPST  114 (191)
T ss_dssp             --CSEEEECCCCC
T ss_pred             --CCeEEecCCCC
Confidence              58888776654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.72  E-value=0.038  Score=42.80  Aligned_cols=39  Identities=21%  Similarity=0.145  Sum_probs=34.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      ++.++++.|.| .|.||+++|++|..-|++|+..+|....
T Consensus        41 ~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          41 DLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             eccccceeecc-ccccchhhhhhhhccCceEEEEeecccc
Confidence            57789998887 6789999999999999999999987544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.61  E-value=0.062  Score=40.92  Aligned_cols=81  Identities=10%  Similarity=0.088  Sum_probs=54.6

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeC--CCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV--ADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~~~   80 (290)
                      +++||+++|.|-|.=+|+-+|..|+++|+.|..+.++.......     ...-.-......|+  ...+.+++...    
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~lk~~~~----   96 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTR-----GESLKLNKHHVEDLGEYSEDLLKKCSL----   96 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEES-----CCCSSCCCCEEEEEEECCHHHHHHHHH----
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccc-----ccceeeeeeccccccccchhHHhhccc----
Confidence            68999999999999999999999999999999887653221000     00000111122333  34556676666    


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                         ..|++|..+|.-
T Consensus        97 ---~aDIvIsavG~p  108 (171)
T d1edza1          97 ---DSDVVITGVPSE  108 (171)
T ss_dssp             ---HCSEEEECCCCT
T ss_pred             ---cCCEEEEccCCC
Confidence               379999999864

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.032  Score=42.15  Aligned_cols=42  Identities=26%  Similarity=0.285  Sum_probs=36.1

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      .+.||+++|.|= |.||+.+|++|...|++|++.++++-+.-+
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~   62 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQ   62 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHH
Confidence            467999999975 589999999999999999999999855433

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.41  E-value=0.032  Score=42.56  Aligned_cols=42  Identities=24%  Similarity=0.117  Sum_probs=37.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGL   44 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~   44 (290)
                      +++||.++|.|-|.=+|+-++..|+++|+.|.++......+.
T Consensus        36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             ccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            578999999999999999999999999999999888765544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.25  E-value=0.093  Score=40.81  Aligned_cols=36  Identities=8%  Similarity=-0.140  Sum_probs=30.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      +.|. |.|.+|..+|..|+++|++|+..|.+++..+.
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~   38 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDL   38 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence            4555 78999999999999999999999998765443

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.92  E-value=0.022  Score=44.32  Aligned_cols=37  Identities=19%  Similarity=0.064  Sum_probs=30.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|+++..++
T Consensus         9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~   45 (189)
T d1n1ea2           9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRL   45 (189)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHH
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHH
Confidence            5777775 569999999999999999999999766554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.53  E-value=0.051  Score=43.03  Aligned_cols=39  Identities=28%  Similarity=0.306  Sum_probs=30.4

Q ss_pred             CCcCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            1 MAETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         1 m~~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      |+.-+.|+|+|.|| |-.|.++|.+|+++|++|.+++|+.
T Consensus         1 ~~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           1 LMMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            33334556777765 6789999999999999999999864

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.53  E-value=0.043  Score=40.84  Aligned_cols=37  Identities=11%  Similarity=0.144  Sum_probs=31.9

Q ss_pred             CCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097           14 ANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus        14 gs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      |+|-+|.++++.|++.|++|++.+|+.++.++..++.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            7899999999999999999999999987776655544

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.50  E-value=0.16  Score=40.33  Aligned_cols=74  Identities=22%  Similarity=0.077  Sum_probs=55.5

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      +.+++|=.|++.|   .++..|+++|++|+.++.++..++.+.+.....+. ++.++..|+.+...           -+.
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~-~i~~~~~d~~~l~~-----------~~~  105 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAF-----------KNE  105 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCC-----------CSC
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccc-cchheehhhhhccc-----------ccc
Confidence            4568999998876   45667889999999999999888777777665443 58899999876431           136


Q ss_pred             ccEEEEccc
Q 039097           85 LDILVNNAG   93 (290)
Q Consensus        85 id~li~~Ag   93 (290)
                      .|++++.-+
T Consensus       106 fD~I~~~~~  114 (251)
T d1wzna1         106 FDAVTMFFS  114 (251)
T ss_dssp             EEEEEECSS
T ss_pred             cchHhhhhh
Confidence            898887543

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.16  E-value=0.059  Score=39.93  Aligned_cols=40  Identities=13%  Similarity=0.126  Sum_probs=32.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CeEEEEecCcccHHHHHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNG-IITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g-~~Vi~~~r~~~~~~~~~~~   49 (290)
                      +.+.|+ |-+|.++++.|++.| ++|++.+|++++.+...++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            455555 999999999999888 8999999998776665544

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.12  E-value=0.1  Score=38.61  Aligned_cols=38  Identities=11%  Similarity=0.073  Sum_probs=30.6

Q ss_pred             CcEEEEe-cCCCchhHHHHHHHHHCCCeEEEEecCcccH
Q 039097            6 KRYAVVT-GANKGIGYEVVRQLALNGIITVLTARDEKGG   43 (290)
Q Consensus         6 ~k~~lIT-Ggs~gIG~aia~~L~~~g~~Vi~~~r~~~~~   43 (290)
                      ++.++|. .|++.||.++|..|++.|++|.++.+.+.-+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~   77 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLAN   77 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccc
Confidence            4455554 5678999999999999999999999876443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.06  E-value=0.11  Score=40.41  Aligned_cols=72  Identities=22%  Similarity=0.199  Sum_probs=52.6

Q ss_pred             CcCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            2 AETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         2 ~~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .++.||+||=.|+++|+   ++..++..|+ +|+.++.++..++.+.+.+     .++.++.+|+.+.            
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-----~~~~~~~~D~~~l------------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-----GGVNFMVADVSEI------------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-----TTSEEEECCGGGC------------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-----ccccEEEEehhhc------------
Confidence            36789999999988873   3344666776 6999999987666554433     3578899998643            


Q ss_pred             hcCCccEEEEcccc
Q 039097           81 HFGKLDILVNNAGI   94 (290)
Q Consensus        81 ~~~~id~li~~Ag~   94 (290)
                       -+++|+||.|.-+
T Consensus       105 -~~~fD~Vi~NPPf  117 (197)
T d1ne2a_         105 -SGKYDTWIMNPPF  117 (197)
T ss_dssp             -CCCEEEEEECCCC
T ss_pred             -CCcceEEEeCccc
Confidence             2589999999765

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.62  E-value=0.1  Score=41.68  Aligned_cols=46  Identities=17%  Similarity=0.165  Sum_probs=39.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEK   49 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~   49 (290)
                      +++||+++|-| -|.+|..+|+.|.+.|++|++.+.+........+.
T Consensus        36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            58899999986 57899999999999999999999887766655544

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.53  E-value=0.18  Score=40.03  Aligned_cols=76  Identities=13%  Similarity=0.024  Sum_probs=57.8

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ..++++|=.|.+.|.   ++..|+++|.+|+.++.++..++.+.+.....+. ++.++..|+.+.+           ..+
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~-~v~~~~~d~~~~~-----------~~~  100 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLN-----------INR  100 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCC-----------CSC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCc-cceeeccchhhhc-----------ccc
Confidence            456789999998875   7778888999999999999888877766655443 5888999987643           124


Q ss_pred             CccEEEEcccc
Q 039097           84 KLDILVNNAGI   94 (290)
Q Consensus        84 ~id~li~~Ag~   94 (290)
                      ++|++++.-+.
T Consensus       101 ~fD~i~~~~~~  111 (246)
T d1y8ca_         101 KFDLITCCLDS  111 (246)
T ss_dssp             CEEEEEECTTG
T ss_pred             cccccceeeee
Confidence            78999876443

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.52  E-value=0.24  Score=38.71  Aligned_cols=81  Identities=19%  Similarity=0.183  Sum_probs=59.8

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+||-.|+++|--.++..++...+.+|+.++++++..+.+.+.++...-.++.++..|..+..          ...+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            36689988888877666665666566799999999998888888887766667888887765421          11247


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            99999988753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.46  E-value=0.24  Score=38.87  Aligned_cols=79  Identities=15%  Similarity=0.096  Sum_probs=62.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|.+||..|+++|--.++.-+|.  |.+|+...++++-.+.+.+.++..+-.++.++..|..+-.          ...++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCc
Confidence            36789999999988888888777  4679999999888887787787777678999999986421          12358


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999988864

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.37  E-value=0.4  Score=40.00  Aligned_cols=80  Identities=15%  Similarity=0.109  Sum_probs=54.5

Q ss_pred             CcEEEEecCC-CchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            6 KRYAVVTGAN-KGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         6 ~k~~lITGgs-~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      |++||=.|+. |+++.++|    ..|+ +|+.++.++..++.+.+.+...+- .++.++..|+.+      ....+...-
T Consensus       146 g~~VLDl~~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~~  215 (324)
T d2as0a2         146 GDRVLDVFTYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKKG  215 (324)
T ss_dssp             TCEEEETTCTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHTT
T ss_pred             CCeeecccCcccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhcc
Confidence            6677666554 56565544    4666 799999999988887777766553 467888877653      333344444


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      .++|.||.++-..
T Consensus       216 ~~fD~Vi~DpP~~  228 (324)
T d2as0a2         216 EKFDIVVLDPPAF  228 (324)
T ss_dssp             CCEEEEEECCCCS
T ss_pred             CCCCchhcCCccc
Confidence            5899999987754

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=92.36  E-value=0.11  Score=39.73  Aligned_cols=38  Identities=26%  Similarity=0.168  Sum_probs=34.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      .+.||++.|.|.+. ||+.+++.+..-|++|+..+|++.
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccc
Confidence            47899999999765 999999999999999999998864

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=92.35  E-value=0.1  Score=38.54  Aligned_cols=36  Identities=8%  Similarity=0.036  Sum_probs=29.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      +-|. |.|-+|+++|+.|+++|+.|++.++++.+...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~   38 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTI   38 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHH
Confidence            3444 66999999999999999999999887766544

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=92.31  E-value=0.35  Score=37.38  Aligned_cols=75  Identities=19%  Similarity=0.209  Sum_probs=54.8

Q ss_pred             cCCCcEEEEecCCCc-hhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKG-IGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~g-IG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +++|++||=-|++.| +|.+    ++..|+ +|+.++.++..++.+.+.++... .+..++..|+.+.            
T Consensus        44 dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~-~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          44 DIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEFK-GKFKVFIGDVSEF------------  106 (201)
T ss_dssp             SSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGGT-TSEEEEESCGGGC------------
T ss_pred             CCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHcC-CCceEEECchhhh------------
Confidence            578899888887765 4433    445675 89999999988887777665544 4678888887543            


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                       .+++|+||.|.-+.
T Consensus       107 -~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -CCCCSEEEECCCCS
T ss_pred             -CCcCcEEEEcCccc
Confidence             24899999998753

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=92.29  E-value=0.33  Score=39.56  Aligned_cols=78  Identities=17%  Similarity=0.302  Sum_probs=53.6

Q ss_pred             cEEEEec-CCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            7 RYAVVTG-ANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         7 k~~lITG-gs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      ++++-.| |+|-|+.++++   ...++|+.++.++..++-+.+..+..+ ..++.+...|+.+.         +....++
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            4555444 44456655543   356799999999998887777766554 34677788888653         2223468


Q ss_pred             ccEEEEccccCC
Q 039097           85 LDILVNNAGITG   96 (290)
Q Consensus        85 id~li~~Ag~~~   96 (290)
                      +|++|.|.-+..
T Consensus       180 fDlIVsNPPYI~  191 (271)
T d1nv8a_         180 IEMILSNPPYVK  191 (271)
T ss_dssp             CCEEEECCCCBC
T ss_pred             ccEEEEcccccC
Confidence            999999998874

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.04  E-value=0.093  Score=40.04  Aligned_cols=41  Identities=17%  Similarity=0.197  Sum_probs=31.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLK   51 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~   51 (290)
                      ++.|.|+ |..|.++|..|++.|++|.+.+|..++  +..+.+.
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~   42 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSIS   42 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHh
Confidence            4566665 889999999999999999999986543  3344553

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=91.92  E-value=0.75  Score=34.95  Aligned_cols=38  Identities=13%  Similarity=0.071  Sum_probs=33.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ++.++++.|. |.|.||+.+|+++..-|++|+..++...
T Consensus        41 ~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          41 EARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             CSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceEEEEe-ecccchhhhhhhcccccceEeecccccc
Confidence            4678898888 6789999999999999999999998643

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=91.86  E-value=0.56  Score=35.15  Aligned_cols=75  Identities=16%  Similarity=0.152  Sum_probs=52.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      -+++|.|+ |-.|..-++.....|+.|.++|.+.+.+++..+...    ..+   .+-..+.+.+.+.++       .-|
T Consensus        33 a~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~----~~~---~~~~~~~~~l~~~~~-------~aD   97 (168)
T d1pjca1          33 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRV---ELLYSNSAEIETAVA-------EAD   97 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGS---EEEECCHHHHHHHHH-------TCS
T ss_pred             cEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc----ccc---eeehhhhhhHHHhhc-------cCc
Confidence            46777776 567888899999999999999999877665444332    222   233456666665555       579


Q ss_pred             EEEEccccCC
Q 039097           87 ILVNNAGITG   96 (290)
Q Consensus        87 ~li~~Ag~~~   96 (290)
                      ++|..+-+.+
T Consensus        98 ivI~aalipG  107 (168)
T d1pjca1          98 LLIGAVLVPG  107 (168)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEEeeecCC
Confidence            9999998654

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.72  E-value=0.095  Score=39.46  Aligned_cols=85  Identities=15%  Similarity=0.203  Sum_probs=55.5

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC-CCeEEE-EecCccc-HHHHHHHHHh-------------cCCCcEEEEEeeCCCHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLALN-GIITVL-TARDEKG-GLEAVEKLKH-------------SGFDNVIFHQLDVADPAA   70 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~-g~~Vi~-~~r~~~~-~~~~~~~l~~-------------~~~~~~~~~~~Dl~~~~~   70 (290)
                      =++.|.|++|.+|+++++.+.+. ++.++. ++|.... ......++..             ....... +..|++.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            36899999999999999999887 566543 3443211 0000000000             0001111 5699999999


Q ss_pred             HHHHHHHHHhhcCCccEEEEcccc
Q 039097           71 IHSVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        71 v~~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      +.+.++.+.+.  ++.+||-..|+
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99999987776  78899988886

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.55  E-value=0.6  Score=34.18  Aligned_cols=83  Identities=13%  Similarity=0.104  Sum_probs=53.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-----CcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-----DNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +-+.|- |-+|.++|++|++.|+.| +..|+.++..+..++......     ....++...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            344444 899999999999888755 567887776666555422110     1234444556677788888887776655


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5555555554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.53  E-value=0.14  Score=36.43  Aligned_cols=37  Identities=22%  Similarity=0.220  Sum_probs=30.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      .++|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence            3466777774 579999999999999999999988753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.43  E-value=0.16  Score=36.06  Aligned_cols=36  Identities=17%  Similarity=0.251  Sum_probs=30.3

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      +|+++|.| +|.+|.++|..|.+.|.+|.++.+.+.-
T Consensus        30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEEC-cchhHHHHHHHhhcccceEEEEeecccc
Confidence            56776665 5799999999999999999999988653

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.33  E-value=1.6  Score=35.92  Aligned_cols=80  Identities=13%  Similarity=-0.022  Sum_probs=54.3

Q ss_pred             CcEEE-EecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            6 KRYAV-VTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         6 ~k~~l-ITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      +++|| +..++|+++.+.    +..|++|+.++.+...++.+.+.....+  ..++.++..|+.      ++++.....-
T Consensus       133 ~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         133 PLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             CCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            55565 445556555544    4578999999999988887777665443  336888887764      3455555454


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      .+.|+||.+.-.+
T Consensus       203 ~~fD~IilDPP~f  215 (309)
T d2igta1         203 STYDIILTDPPKF  215 (309)
T ss_dssp             CCBSEEEECCCSE
T ss_pred             CCCCEEEECCCcc
Confidence            6899999987644

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.30  E-value=0.35  Score=39.87  Aligned_cols=76  Identities=13%  Similarity=0.151  Sum_probs=52.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhc-CCCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHS-GFDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      ..++|+||-.|++.|+   ++..+++.|+ +|+.++.++.. ..+.+..... ...++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            3578999999999886   5566777887 79999988653 3344444333 34578999999877531          


Q ss_pred             hcCCccEEEEcc
Q 039097           81 HFGKLDILVNNA   92 (290)
Q Consensus        81 ~~~~id~li~~A   92 (290)
                      ...++|+||..-
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            124799998753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=91.21  E-value=0.78  Score=31.88  Aligned_cols=81  Identities=17%  Similarity=0.094  Sum_probs=56.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH-HHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP-AAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~   84 (290)
                      ||++||.--..-+-..+...|.+.|+.|+..+.+..   ++.+.+++..   ..++-+|+.=+ .+=-++++++++..+.
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~---~al~~~~~~~---~dliilD~~mp~~~G~e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGR---EAVEKYKELK---PDIVTMDITMPEMNGIDAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHH---HHHHHHHHHC---CSEEEEECSCGGGCHHHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHH---HHHHHHHhcc---CCEEEEecCCCCCCHHHHHHHHHHhCCC
Confidence            789999999999999999999999999986665543   4444444333   44555666432 2344677777777677


Q ss_pred             ccEEEEcc
Q 039097           85 LDILVNNA   92 (290)
Q Consensus        85 id~li~~A   92 (290)
                      +-+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77776654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=90.86  E-value=1.2  Score=33.08  Aligned_cols=77  Identities=10%  Similarity=0.025  Sum_probs=41.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHH-CC----CeEEEEecCcccHHHHHHHHHh---cCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            7 RYAVVTGANKGIGYEVVRQLAL-NG----IITVLTARDEKGGLEAVEKLKH---SGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~-~g----~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      .++.|.||++.....++..++. ..    .+|++.|.++++++...+.+..   ..+....+...  +   +.++.++  
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---d~~eal~--   76 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--T---DPEEAFT--   76 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--S---CHHHHHS--
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--C---ChhhccC--
Confidence            3566777765322233334443 22    3799999999887744433322   11122222211  1   2222333  


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                           .-|+||+.||..
T Consensus        77 -----~AD~Vvitag~~   88 (167)
T d1u8xx1          77 -----DVDFVMAHIRVG   88 (167)
T ss_dssp             -----SCSEEEECCCTT
T ss_pred             -----CCCEEEECCCcC
Confidence                 689999999974

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.57  E-value=0.19  Score=35.09  Aligned_cols=34  Identities=24%  Similarity=0.200  Sum_probs=29.2

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      |+++|.|| |.||.++|..|.+.|.+|.++.|.+.
T Consensus        23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            56677664 79999999999999999999998764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.46  E-value=0.46  Score=33.89  Aligned_cols=81  Identities=15%  Similarity=0.171  Sum_probs=56.3

Q ss_pred             CCc-CCCcEEEEecCCC-ch---------hHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHH
Q 039097            1 MAE-TAKRYAVVTGANK-GI---------GYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPA   69 (290)
Q Consensus         1 m~~-~~~k~~lITGgs~-gI---------G~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~   69 (290)
                      |+. ...|++||.|++. -|         +...++.|.+.|+++++...|++......+.     .++   +.+.=-..+
T Consensus         1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~-----aD~---lYfePlt~e   72 (127)
T d1a9xa3           1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM-----ADA---TYIEPIHWE   72 (127)
T ss_dssp             CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG-----SSE---EECSCCCHH
T ss_pred             CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh-----cce---eeeecCCHH
Confidence            554 4568899999874 22         6788999999999999999998765432211     122   333444567


Q ss_pred             HHHHHHHHHHhhcCCccEEEEcccc
Q 039097           70 AIHSVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        70 ~v~~~~~~~~~~~~~id~li~~Ag~   94 (290)
                      ++.+++++-     ++|.++...|-
T Consensus        73 ~v~~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          73 VVRKIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHHHHh-----CcCCeEEEeee
Confidence            777777763     89999887774

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.36  E-value=0.88  Score=34.23  Aligned_cols=76  Identities=22%  Similarity=0.193  Sum_probs=53.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCC-CcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGF-DNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      .|.+||=.|++.|   .++..|+..+.+|+.++.++..++.+.+.++..+- .++.++.+|..          ++.....
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            3667776777665   23344566677999999999999988888877653 47889988842          2223345


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            8999998754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=90.19  E-value=0.31  Score=37.49  Aligned_cols=81  Identities=17%  Similarity=0.144  Sum_probs=60.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLD   86 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   86 (290)
                      .++=+|.|+||.-.++.+++ . +.+|+.+|+++..++.+.+.++... .++.++..++.+...+   +...  ....+|
T Consensus        26 ~~lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~-~r~~~~~~~f~~~~~~---~~~~--~~~~vd   97 (192)
T d1m6ya2          26 IILDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFL---LKTL--GIEKVD   97 (192)
T ss_dssp             EEEETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHH---HHHT--TCSCEE
T ss_pred             EEEEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhcccc-ccccchhHHHhhHHHH---HHHc--CCCCcc
Confidence            34556888888888888887 3 4699999999998888777776543 5699999999875443   2221  135899


Q ss_pred             EEEEccccC
Q 039097           87 ILVNNAGIT   95 (290)
Q Consensus        87 ~li~~Ag~~   95 (290)
                      .++..-|+.
T Consensus        98 gIl~DlGvS  106 (192)
T d1m6ya2          98 GILMDLGVS  106 (192)
T ss_dssp             EEEEECSCC
T ss_pred             eeeeccchh
Confidence            999999974

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=90.18  E-value=1.4  Score=36.40  Aligned_cols=81  Identities=14%  Similarity=0.151  Sum_probs=55.3

Q ss_pred             CCcEEEEe-cCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC--CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            5 AKRYAVVT-GANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG--FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         5 ~~k~~lIT-Ggs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      +|++||=. .++|+++.+    ++..|+ +|+.++.++..++.+.+..+..+  ..++.++..|+.      ++++....
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            46766644 555666644    344677 69999999988888777775444  346888998874      34445555


Q ss_pred             hcCCccEEEEccccC
Q 039097           81 HFGKLDILVNNAGIT   95 (290)
Q Consensus        81 ~~~~id~li~~Ag~~   95 (290)
                      +..+.|+||..+-.+
T Consensus       214 ~~~~fD~Ii~DPP~f  228 (317)
T d2b78a2         214 HHLTYDIIIIDPPSF  228 (317)
T ss_dssp             TTCCEEEEEECCCCC
T ss_pred             hcCCCCEEEEcChhh
Confidence            556899999996543

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=90.10  E-value=0.24  Score=37.28  Aligned_cols=79  Identities=13%  Similarity=-0.010  Sum_probs=55.3

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC------------CCcEEEEEeeCCCHHHH
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG------------FDNVIFHQLDVADPAAI   71 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~------------~~~~~~~~~Dl~~~~~v   71 (290)
                      ..|++||..|.+.|   ..+..|+++|++|+.+|.++..++.+.+..+...            ...+.++.+|..+... 
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-   94 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA-   94 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH-
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc-
Confidence            35789999999887   3677889999999999999988888776664321            1235677888876543 


Q ss_pred             HHHHHHHHhhcCCccEEEEcccc
Q 039097           72 HSVADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        72 ~~~~~~~~~~~~~id~li~~Ag~   94 (290)
                        ...      ...|.++.....
T Consensus        95 --~~~------~~~D~i~~~~~l  109 (201)
T d1pjza_          95 --RDI------GHCAAFYDRAAM  109 (201)
T ss_dssp             --HHH------HSEEEEEEESCG
T ss_pred             --ccc------cceeEEEEEeee
Confidence              111      256777665443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.04  E-value=0.28  Score=34.27  Aligned_cols=37  Identities=24%  Similarity=0.192  Sum_probs=30.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ..+|.++|.| +|.||..+|..|.+.|.+|.++.|.+.
T Consensus        20 ~~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence            3467777766 579999999999999999999998754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=89.97  E-value=1.2  Score=33.67  Aligned_cols=82  Identities=18%  Similarity=0.129  Sum_probs=49.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCH---------------HHHH
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADP---------------AAIH   72 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~---------------~~v~   72 (290)
                      +++|.|| |-.|..-++-...-|+.|.++|.+...+++..+.    ++   .++..+..+.               +...
T Consensus        31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l----~~---~~i~~~~~~~~~~~~~~gyA~~~s~~~~~  102 (183)
T d1l7da1          31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESL----GG---KFITVDDEAMKTAETAGGYAKEMGEEFRK  102 (183)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHT----TC---EECCC-----------------------C
T ss_pred             EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHh----hc---ceEEEeccccccccccccchhhcCHHHHH
Confidence            6777765 5678888999999999999999998876654332    21   1111111111               1111


Q ss_pred             HHHHHHHhhcCCccEEEEccccCCC
Q 039097           73 SVADFIRSHFGKLDILVNNAGITGI   97 (290)
Q Consensus        73 ~~~~~~~~~~~~id~li~~Ag~~~~   97 (290)
                      +.-+.+.+...+-|++|..+-+-+.
T Consensus       103 ~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1         103 KQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             CHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             HHHHHHHHHHHhhhhheeeeecCCc
Confidence            2233344445678999999987543

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=89.89  E-value=0.82  Score=33.61  Aligned_cols=32  Identities=16%  Similarity=0.211  Sum_probs=26.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHC--CCeEEEEec
Q 039097            7 RYAVVTGANKGIGYEVVRQLALN--GIITVLTAR   38 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~--g~~Vi~~~r   38 (290)
                      |++.|.|++|-||..+..-+.+.  .++|+.++-
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa   35 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVA   35 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEe
Confidence            57999999999999999988886  467776653

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=89.86  E-value=0.23  Score=38.52  Aligned_cols=39  Identities=15%  Similarity=0.073  Sum_probs=34.0

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      ++.||++.|.| -|.||+.+|++|..-|++|+..++....
T Consensus        40 el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          40 EVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             CGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             cccCCeEEEec-ccccchhHHHhHhhhcccccccCccccc
Confidence            57899999997 5789999999999999999999877543

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=89.75  E-value=0.16  Score=41.02  Aligned_cols=38  Identities=21%  Similarity=0.200  Sum_probs=32.9

Q ss_pred             CCCcEEEEecCCCchhHHH-----HHHHHHCCCeEEEEecCcc
Q 039097            4 TAKRYAVVTGANKGIGYEV-----VRQLALNGIITVLTARDEK   41 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~ai-----a~~L~~~g~~Vi~~~r~~~   41 (290)
                      ..+++++|+.|=||+|+.+     |..|+++|.+|.++|-++.
T Consensus        17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            3577888888899999987     7999999999999999865

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.71  E-value=0.3  Score=34.47  Aligned_cols=34  Identities=15%  Similarity=0.135  Sum_probs=28.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      |+++|.|| |.||.++|..|.+.|++|.++.|++.
T Consensus        24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            56666664 78999999999999999999988764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=89.64  E-value=0.21  Score=38.73  Aligned_cols=38  Identities=16%  Similarity=0.102  Sum_probs=33.2

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ++.||++.|.|. |.||+.+|++|..-|++|+..++...
T Consensus        42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            577899999875 67999999999999999999998754

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.39  E-value=0.19  Score=37.95  Aligned_cols=76  Identities=14%  Similarity=-0.055  Sum_probs=42.7

Q ss_pred             EEEEecC-CCchhHHHHHHHHHCC----CeEEEEecCcccHH-HHHHHHHh----cCCCcEEEEEeeCCCHHHHHHHHHH
Q 039097            8 YAVVTGA-NKGIGYEVVRQLALNG----IITVLTARDEKGGL-EAVEKLKH----SGFDNVIFHQLDVADPAAIHSVADF   77 (290)
Q Consensus         8 ~~lITGg-s~gIG~aia~~L~~~g----~~Vi~~~r~~~~~~-~~~~~l~~----~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (290)
                      ++.|.|| +.|.+..++..+....    -++++.|++++..+ +..+.+..    ..+  ........+|..   +.++ 
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~--~~~~~~~~td~~---~al~-   76 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAG--VPIEIHLTLDRR---RALD-   76 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTT--CCCEEEEESCHH---HHHT-
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcC--CCceeeecCCch---hhcC-
Confidence            5667776 5577777777776542    38999999876532 22222211    111  111222233432   2222 


Q ss_pred             HHhhcCCccEEEEccccC
Q 039097           78 IRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        78 ~~~~~~~id~li~~Ag~~   95 (290)
                            .-|++|+.||..
T Consensus        77 ------gaDvVv~ta~~~   88 (169)
T d1s6ya1          77 ------GADFVTTQFRVG   88 (169)
T ss_dssp             ------TCSEEEECCCTT
T ss_pred             ------CCCEEEEccccC
Confidence                  579999999975

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.38  E-value=0.18  Score=40.81  Aligned_cols=34  Identities=15%  Similarity=0.217  Sum_probs=30.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA   37 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~   37 (290)
                      +++||+++|-| .|.+|+.+|+.|.+.|++|+.++
T Consensus        33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            58899999998 79999999999999999988664

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=89.37  E-value=0.28  Score=36.72  Aligned_cols=42  Identities=14%  Similarity=0.169  Sum_probs=35.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      .+.||+++|.| =|.+|+.+|++|...|++|+++.++|-..-+
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alq   61 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQ   61 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHH
Confidence            36789999886 5789999999999999999999999855433

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=89.27  E-value=0.18  Score=38.05  Aligned_cols=37  Identities=16%  Similarity=0.046  Sum_probs=30.1

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCe-EEEEecCccc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGII-TVLTARDEKG   42 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~-Vi~~~r~~~~   42 (290)
                      .+|+|+|.|| |-.|...|..|+++|++ |.++.|++..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            4677888875 67899999999999995 9899887543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=89.24  E-value=0.79  Score=34.73  Aligned_cols=78  Identities=18%  Similarity=0.184  Sum_probs=56.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +++++||=.|++.|  + .+..|+++|++|+.++.++..++.+.+.....+-..+.+...|+.+..     .+      +
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~------~   94 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----FD------G   94 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----CC------C
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----cc------c
Confidence            34567888888644  3 556788899999999999988887776666555456888888887654     11      3


Q ss_pred             CccEEEEccccC
Q 039097           84 KLDILVNNAGIT   95 (290)
Q Consensus        84 ~id~li~~Ag~~   95 (290)
                      ..|+++.+.-+.
T Consensus        95 ~fD~I~~~~~~~  106 (198)
T d2i6ga1          95 EYDFILSTVVMM  106 (198)
T ss_dssp             CEEEEEEESCGG
T ss_pred             cccEEEEeeeee
Confidence            689999877653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.09  E-value=0.2  Score=41.26  Aligned_cols=33  Identities=18%  Similarity=0.267  Sum_probs=24.0

Q ss_pred             cEEEEecCCCchhH-----HHHHHHHHCCCeEEEEecCc
Q 039097            7 RYAVVTGANKGIGY-----EVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         7 k~~lITGgs~gIG~-----aia~~L~~~g~~Vi~~~r~~   40 (290)
                      |++||++|+.| |.     +++++|.++|++|..++...
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            45666665545 65     68999999999998876543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.93  E-value=1.5  Score=31.83  Aligned_cols=78  Identities=13%  Similarity=0.173  Sum_probs=52.4

Q ss_pred             cCCCcEEEEecCC-CchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            3 ETAKRYAVVTGAN-KGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         3 ~~~~k~~lITGgs-~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .++|+++|=.|++ |.+|.+    ++.+|+ +|+.++.+++..+...+.++..+ .+++.+++.|..+      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            3578887755555 556654    455776 79999999888777766665544 3468999988543      222   


Q ss_pred             hhcCCccEEEEccc
Q 039097           80 SHFGKLDILVNNAG   93 (290)
Q Consensus        80 ~~~~~id~li~~Ag   93 (290)
                      ...++.|+++.++-
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            22357999988764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.88  E-value=0.24  Score=35.13  Aligned_cols=34  Identities=32%  Similarity=0.342  Sum_probs=29.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      |+++|.||+ .||.++|..|.+.|.+|.++.|++.
T Consensus        23 k~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          23 GRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             SEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeeccc
Confidence            677787764 7999999999999999999998753

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.85  E-value=0.18  Score=45.29  Aligned_cols=36  Identities=19%  Similarity=0.313  Sum_probs=29.8

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecC
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARD   39 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~   39 (290)
                      .+++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        22 ~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          22 ALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            356778999986 7999999999999997 68887643

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=88.81  E-value=0.25  Score=39.59  Aligned_cols=34  Identities=12%  Similarity=0.109  Sum_probs=30.9

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA   37 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~   37 (290)
                      +++||+++|-| -|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            58899999996 89999999999999999988665

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.78  E-value=0.28  Score=34.43  Aligned_cols=34  Identities=21%  Similarity=0.283  Sum_probs=28.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      |+++|.|| |.||.++|..|.+.|.+|.++.|.+.
T Consensus        23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            56666664 78999999999999999999998753

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.76  E-value=0.33  Score=38.04  Aligned_cols=79  Identities=16%  Similarity=0.129  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhc-----------------CCCcEEEEEeeCCC
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHS-----------------GFDNVIFHQLDVAD   67 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~-----------------~~~~~~~~~~Dl~~   67 (290)
                      .+++||.-|.+.|   ..+..|+++|++|+.++.++..++.+.++....                 ....+.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5679999998877   468888999999999999998877766654321                 12367888888765


Q ss_pred             HHHHHHHHHHHHhhcCCccEEEEccccC
Q 039097           68 PAAIHSVADFIRSHFGKLDILVNNAGIT   95 (290)
Q Consensus        68 ~~~v~~~~~~~~~~~~~id~li~~Ag~~   95 (290)
                      ...         ...+..|+++......
T Consensus       122 l~~---------~~~~~fd~i~~~~~l~  140 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDRGALV  140 (229)
T ss_dssp             GGG---------SCCCCEEEEEESSSTT
T ss_pred             ccc---------cccCceeEEEEEEEEE
Confidence            431         1113577777666554

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=88.61  E-value=0.22  Score=37.56  Aligned_cols=75  Identities=19%  Similarity=0.185  Sum_probs=43.2

Q ss_pred             EEEEecCCCchhH--HHHHHHHHC----CCeEEEEecCcccHHHHHHHHHh---cCCCcEEEEEeeCCCHHHHHHHHHHH
Q 039097            8 YAVVTGANKGIGY--EVVRQLALN----GIITVLTARDEKGGLEAVEKLKH---SGFDNVIFHQLDVADPAAIHSVADFI   78 (290)
Q Consensus         8 ~~lITGgs~gIG~--aia~~L~~~----g~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~   78 (290)
                      ++.|.|| |.+|.  ++...|+..    +.++++.|+++++++.....+..   ..+....+...  +|   .++.++  
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL~--   75 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVII--   75 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHHT--
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhccc--
Confidence            5677776 55554  455555543    35899999998887654433332   22222222221  22   233333  


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                           ..|++|+.++..
T Consensus        76 -----dad~Vv~~~~~g   87 (171)
T d1obba1          76 -----DADFVINTAMVG   87 (171)
T ss_dssp             -----TCSEEEECCCTT
T ss_pred             -----CCCeEeeecccc
Confidence                 689999999864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.55  E-value=0.24  Score=39.44  Aligned_cols=34  Identities=18%  Similarity=0.152  Sum_probs=29.4

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHH-CCCeEEEEe
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLAL-NGIITVLTA   37 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~-~g~~Vi~~~   37 (290)
                      ++++++++|-| .|.+|+.+|+.|.+ .|++|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            68899999986 89999999999986 499988765

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=88.41  E-value=0.36  Score=33.56  Aligned_cols=34  Identities=21%  Similarity=0.151  Sum_probs=28.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      |+++|. |+|.+|.++|..|.+.|++|.++.|.+.
T Consensus        22 ~~vvIi-GgG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          22 QHLVVV-GGGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             SEEEEE-CCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEE-CCCHHHHHHHHHHhhcccceEEEeeecc
Confidence            455555 5689999999999999999999988754

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=88.27  E-value=0.47  Score=33.19  Aligned_cols=34  Identities=26%  Similarity=0.132  Sum_probs=29.0

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ++++|.|| |.||.++|..|++.|.+|.++.|...
T Consensus        23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            56777764 79999999999999999999987753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=88.26  E-value=0.45  Score=33.13  Aligned_cols=34  Identities=24%  Similarity=0.097  Sum_probs=28.4

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      |+++|.| +|.+|.++|..|.+.|.+|.++.|.+.
T Consensus        22 ~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence            4555554 579999999999999999999998764

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=87.77  E-value=0.79  Score=35.36  Aligned_cols=77  Identities=13%  Similarity=-0.013  Sum_probs=57.7

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +++||=.|++.|+-   +..|+++|.+|+.++.+++.++.+.+.+...+..++.++.+|..+..    +      .-+..
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~----~------~~~~f   82 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP----F------TDERF   82 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC----S------CTTCE
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc----c------ccccc
Confidence            57889899887743   45677889999999999988887776666666667999999987753    1      11479


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |+++.+..+.
T Consensus        83 D~v~~~~~l~   92 (231)
T d1vl5a_          83 HIVTCRIAAH   92 (231)
T ss_dssp             EEEEEESCGG
T ss_pred             cccccccccc
Confidence            9999887764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.40  E-value=0.51  Score=33.19  Aligned_cols=32  Identities=22%  Similarity=0.211  Sum_probs=26.8

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecC
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARD   39 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~   39 (290)
                      ++++|.| +|-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence            3455555 5799999999999999999999876

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=87.37  E-value=0.98  Score=36.60  Aligned_cols=76  Identities=12%  Similarity=0.049  Sum_probs=55.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCccE
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKLDI   87 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   87 (290)
                      ++=+-.|||-||.+++..+  ...+|+.++.++..++-+.+..+..+-.++.+++.|+.+.-         .  -.++|+
T Consensus       112 vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~---------~--~~~fDl  178 (274)
T d2b3ta1         112 ILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A--GQQFAM  178 (274)
T ss_dssp             EEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T--TCCEEE
T ss_pred             eeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc---------C--CCceeE
Confidence            4444456677888877654  35699999999988887777766555556999999987542         1  147999


Q ss_pred             EEEccccCC
Q 039097           88 LVNNAGITG   96 (290)
Q Consensus        88 li~~Ag~~~   96 (290)
                      +|.|.-+..
T Consensus       179 IvsNPPYi~  187 (274)
T d2b3ta1         179 IVSNPPYID  187 (274)
T ss_dssp             EEECCCCBC
T ss_pred             EEecchhhh
Confidence            999988764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=87.35  E-value=0.46  Score=36.04  Aligned_cols=38  Identities=21%  Similarity=0.162  Sum_probs=31.9

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      .++|+|+|.|| |--|.+.|..|+++|++|.++.+++..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            45788889886 567899999999999999999987643

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=87.27  E-value=0.31  Score=34.42  Aligned_cols=35  Identities=20%  Similarity=0.095  Sum_probs=29.7

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      |.++|.| +|-||.++|..|.+.|.+|.++.|++..
T Consensus        26 ~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          26 KKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             SEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            5666666 4799999999999999999999988654

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=87.23  E-value=0.23  Score=38.18  Aligned_cols=31  Identities=19%  Similarity=0.239  Sum_probs=27.4

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHHCCCeEEEEe
Q 039097            7 RYAVVTGANKGIGYE-----VVRQLALNGIITVLTA   37 (290)
Q Consensus         7 k~~lITGgs~gIG~a-----ia~~L~~~g~~Vi~~~   37 (290)
                      |+++|||-+.|+|+.     +|..|+++|++|.+.+
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999999975     6788889999999986

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.17  E-value=0.41  Score=39.36  Aligned_cols=34  Identities=21%  Similarity=0.209  Sum_probs=30.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEe
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTA   37 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~   37 (290)
                      +++||+++|-|- |.+|..+|+.|.+.|++|+.++
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            578999999986 7999999999999999988775

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=87.12  E-value=0.41  Score=37.67  Aligned_cols=37  Identities=16%  Similarity=0.128  Sum_probs=29.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      ...++|+|.|| |--|..+|..|+++|++|+++.|++.
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            34567888876 45688888899999999999998753

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.05  E-value=1.1  Score=36.72  Aligned_cols=76  Identities=17%  Similarity=0.103  Sum_probs=52.1

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      .+||+||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+.++..+ .+++.++..|+.+.+.          .
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c
Confidence            468999999998875   4566777886 6888887753 444444444333 4579999999877531          1


Q ss_pred             cCCccEEEEccc
Q 039097           82 FGKLDILVNNAG   93 (290)
Q Consensus        82 ~~~id~li~~Ag   93 (290)
                      ..++|+++..--
T Consensus        98 ~~~~D~ivs~~~  109 (316)
T d1oria_          98 VEKVDIIISEWM  109 (316)
T ss_dssp             SSCEEEEEECCC
T ss_pred             cceeEEEeeeee
Confidence            247899887543

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=86.80  E-value=2.2  Score=33.92  Aligned_cols=74  Identities=19%  Similarity=0.166  Sum_probs=52.0

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      ..|++||=.|.++|+   ++..+++.|++|+.++.++..++.+.+..+..+- ...++..|+.+      ..     ..+
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~-~~~~~~~d~~~------~~-----~~~  183 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV-RPRFLEGSLEA------AL-----PFG  183 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTC-CCEEEESCHHH------HG-----GGC
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCC-ceeEEeccccc------cc-----ccc
Confidence            468899989998886   2335667899999999999998887776655442 35666666421      11     125


Q ss_pred             CccEEEEcc
Q 039097           84 KLDILVNNA   92 (290)
Q Consensus        84 ~id~li~~A   92 (290)
                      +.|.++.|.
T Consensus       184 ~fD~V~ani  192 (254)
T d2nxca1         184 PFDLLVANL  192 (254)
T ss_dssp             CEEEEEEEC
T ss_pred             ccchhhhcc
Confidence            899999773

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.78  E-value=0.5  Score=33.80  Aligned_cols=36  Identities=22%  Similarity=0.193  Sum_probs=30.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCccc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKG   42 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~   42 (290)
                      +|+++|.| +|.+|.++|..|.+.|.+|.++.+.+.-
T Consensus        35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence            56777775 5899999999999999999999987643

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=86.62  E-value=0.36  Score=37.47  Aligned_cols=35  Identities=17%  Similarity=0.192  Sum_probs=29.9

Q ss_pred             CCcEEEEecCCCchhHH-----HHHHHHHCCCeEEEEecC
Q 039097            5 AKRYAVVTGANKGIGYE-----VVRQLALNGIITVLTARD   39 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~a-----ia~~L~~~g~~Vi~~~r~   39 (290)
                      ++|++.|+|+-||+|+.     +|..|+++|.+|.++|-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            48999999999999875     577788899999999855

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=86.56  E-value=3.8  Score=29.17  Aligned_cols=89  Identities=11%  Similarity=0.035  Sum_probs=55.6

Q ss_pred             CCCcEEEEecCCC---chhHHHHHHHHH-CCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeC-CCHHHHHHHHHHH
Q 039097            4 TAKRYAVVTGANK---GIGYEVVRQLAL-NGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV-ADPAAIHSVADFI   78 (290)
Q Consensus         4 ~~~k~~lITGgs~---gIG~aia~~L~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~   78 (290)
                      +++++++|+...+   .+|..++..+++ .|++|+-++.+.+ .++..+...+... .+..+.+=. .....++++.+.+
T Consensus         1 ~~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~~~-d~v~lS~~~~~~~~~~~~~~~~l   78 (137)
T d1ccwa_           1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIETKA-DAILVSSLYGQGEIDCKGLRQKC   78 (137)
T ss_dssp             CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTC-SEEEEEECSSTHHHHHTTHHHHH
T ss_pred             CCCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhcCC-CEEEEeeccccchHHHHHHHHHH
Confidence            4677888864443   789888877765 5999998876532 3344444444343 355555433 4567788888888


Q ss_pred             HhhcCCccEEEEccccC
Q 039097           79 RSHFGKLDILVNNAGIT   95 (290)
Q Consensus        79 ~~~~~~id~li~~Ag~~   95 (290)
                      ++. +.-|+.|..-|..
T Consensus        79 ~~~-~~~~i~iivGG~~   94 (137)
T d1ccwa_          79 DEA-GLEGILLYVGGNI   94 (137)
T ss_dssp             HHT-TCTTCEEEEEESC
T ss_pred             HHh-ccCCCEEEEeCCc
Confidence            765 3345656555544

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.37  E-value=1.2  Score=36.08  Aligned_cols=78  Identities=8%  Similarity=-0.017  Sum_probs=48.9

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCC----cEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFD----NVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +++||=.|.+.|.   ++..|+++|++|+.++.++..++.+.+........    ...+..+|....+.      .+ ..
T Consensus        57 ~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~  126 (292)
T d1xvaa_          57 CHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK------DV-PA  126 (292)
T ss_dssp             CCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH------HS-CC
T ss_pred             CCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc------cc-CC
Confidence            5688888888775   45667788999999999998888776665544322    23344444433221      00 01


Q ss_pred             cCCccEEEEccc
Q 039097           82 FGKLDILVNNAG   93 (290)
Q Consensus        82 ~~~id~li~~Ag   93 (290)
                      .+..|.+++.-.
T Consensus       127 ~~~fd~v~~~~~  138 (292)
T d1xvaa_         127 GDGFDAVICLGN  138 (292)
T ss_dssp             TTCEEEEEECSS
T ss_pred             CCCceEEEEecC
Confidence            136888887544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.37  E-value=0.54  Score=31.28  Aligned_cols=67  Identities=15%  Similarity=0.151  Sum_probs=43.2

Q ss_pred             EEEEecCCCchhH-HHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEE-eeCCCHHHHHHHHHHHHhhcCCc
Q 039097            8 YAVVTGANKGIGY-EVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQ-LDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         8 ~~lITGgs~gIG~-aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      ++-+. |-+|+|. ++|+.|.++|+.|...|+.....-+   .|+..+   +.+.. -|..+              ....
T Consensus         3 ~ihfi-GIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~G---i~i~~gh~~~~--------------i~~~   61 (89)
T d1j6ua1           3 KIHFV-GIGGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKLG---IPIFVPHSADN--------------WYDP   61 (89)
T ss_dssp             EEEEE-TTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHTT---CCEESSCCTTS--------------CCCC
T ss_pred             EEEEE-eECHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHCC---CeEEeeecccc--------------cCCC
Confidence            34445 4456776 7899999999999999998654333   444444   22221 12111              1368


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |.+|...++-
T Consensus        62 d~vV~SsAI~   71 (89)
T d1j6ua1          62 DLVIKTPAVR   71 (89)
T ss_dssp             SEEEECTTCC
T ss_pred             CEEEEecCcC
Confidence            9999999985

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.35  E-value=2  Score=30.84  Aligned_cols=85  Identities=11%  Similarity=0.044  Sum_probs=57.3

Q ss_pred             CcEEEEecCC---CchhHHHHHHHHHCCCeEEEEecCcccHH--HHHHHHHhcCCCcEEEEEee-CCCHHHHHHHHHHHH
Q 039097            6 KRYAVVTGAN---KGIGYEVVRQLALNGIITVLTARDEKGGL--EAVEKLKHSGFDNVIFHQLD-VADPAAIHSVADFIR   79 (290)
Q Consensus         6 ~k~~lITGgs---~gIG~aia~~L~~~g~~Vi~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~   79 (290)
                      -|.+.|.|+|   +..|..+++.|.+.|++|+.+..+.....  .....+.+-. ..+..  ++ +...+.+.++++++.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp-~~iD~--v~i~vp~~~~~~~~~e~~   95 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIP-DKIEV--VDLFVKPKLTMEYVEQAI   95 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCS-SCCSE--EEECSCHHHHHHHHHHHH
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccC-ccceE--EEEEeCHHHHHHHHHHHH
Confidence            4789999999   57999999999999999988876543322  1111222111 11222  22 256778888888888


Q ss_pred             hhcCCccEEEEccccC
Q 039097           80 SHFGKLDILVNNAGIT   95 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~   95 (290)
                      +.  ++..++...|..
T Consensus        96 ~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          96 KK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HH--TCSEEEECTTCC
T ss_pred             Hh--CCCEEEEecccc
Confidence            76  577888888754

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=86.19  E-value=1.2  Score=35.05  Aligned_cols=79  Identities=14%  Similarity=0.046  Sum_probs=55.4

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      ++++||=.|.+.|   ..+..|++.|. +|+.+|.++..++.+.+...... ..++.++.+|.....-         ..-
T Consensus        24 ~~~~VLDlGCG~G---~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKG---GDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTT---TTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCc---HHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            4678888888766   23456677775 79999999999888877766544 3378899999854321         011


Q ss_pred             CCccEEEEccccC
Q 039097           83 GKLDILVNNAGIT   95 (290)
Q Consensus        83 ~~id~li~~Ag~~   95 (290)
                      +..|+|+.+-+..
T Consensus        92 ~~fD~V~~~~~l~  104 (252)
T d1ri5a_          92 KEFDVISSQFSFH  104 (252)
T ss_dssp             SCEEEEEEESCGG
T ss_pred             ccceEEEEcceee
Confidence            3689998876653

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.10  E-value=2.6  Score=32.31  Aligned_cols=88  Identities=11%  Similarity=0.024  Sum_probs=58.9

Q ss_pred             CcEEEEecCCCchhH-----HHHHHHHHC----CCeEEEEecCcccHHHHHHHHHhcC-------------CCcEEEEEe
Q 039097            6 KRYAVVTGANKGIGY-----EVVRQLALN----GIITVLTARDEKGGLEAVEKLKHSG-------------FDNVIFHQL   63 (290)
Q Consensus         6 ~k~~lITGgs~gIG~-----aia~~L~~~----g~~Vi~~~r~~~~~~~~~~~l~~~~-------------~~~~~~~~~   63 (290)
                      .-+++|.||+|.+-+     |+-..+...    +..|+.++|++-..++..+.+....             ..++.++.+
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~   99 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG   99 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence            447899999998753     444444432    4679999998877666655553321             146889999


Q ss_pred             eCCCHHHHHHHHHHHHhhcC--CccEEEEccc
Q 039097           64 DVADPAAIHSVADFIRSHFG--KLDILVNNAG   93 (290)
Q Consensus        64 Dl~~~~~v~~~~~~~~~~~~--~id~li~~Ag   93 (290)
                      |+.+.++..++.+.+.+.-.  .-+.+++.|=
T Consensus       100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1         100 QYDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             CTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             cCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            99999998888776655311  2345666654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=86.06  E-value=0.4  Score=37.95  Aligned_cols=34  Identities=18%  Similarity=0.290  Sum_probs=28.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      +|+|+|.||+ -=|.+.|.+|++.|++|+++.+++
T Consensus         1 ~KkV~IIGaG-~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAG-VSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCS-HHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcC-HHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5778888764 457888999999999999998764

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.03  E-value=2.6  Score=29.51  Aligned_cols=78  Identities=13%  Similarity=0.104  Sum_probs=52.4

Q ss_pred             CCCcEEEEecCCC-ch---------hHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHH
Q 039097            4 TAKRYAVVTGANK-GI---------GYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHS   73 (290)
Q Consensus         4 ~~~k~~lITGgs~-gI---------G~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~   73 (290)
                      ...|++||.|++. -|         +...++.|.+.|++++++..|++......+     ..+++   .+.=-..+.+.+
T Consensus         2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-----~aD~l---Yfeplt~e~v~~   73 (121)
T d1a9xa4           2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-----TSDRL---YFEPVTLEDVLE   73 (121)
T ss_dssp             SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-----SSSEE---ECCCCSHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-----hcCce---EEccCCHHHHHH
Confidence            4578899999874 22         678899999999999999999876442111     01222   233335566776


Q ss_pred             HHHHHHhhcCCccEEEEcccc
Q 039097           74 VADFIRSHFGKLDILVNNAGI   94 (290)
Q Consensus        74 ~~~~~~~~~~~id~li~~Ag~   94 (290)
                      ++++-     ++|.+|..-|-
T Consensus        74 Ii~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          74 IVRIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHHH-----CCSEEECSSST
T ss_pred             HHHHh-----CCCEEEeehhh
Confidence            66652     78988877763

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=86.02  E-value=3.3  Score=27.46  Aligned_cols=70  Identities=14%  Similarity=0.137  Sum_probs=44.4

Q ss_pred             CcEEEEecCCCchh-HHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCC
Q 039097            6 KRYAVVTGANKGIG-YEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGK   84 (290)
Q Consensus         6 ~k~~lITGgs~gIG-~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   84 (290)
                      .|++.+.|-+ |+| .++|+.|.++|+.|...|+.....-   +.+.+.+   +.+...+-.  +           ....
T Consensus         8 ~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~G---i~v~~g~~~--~-----------~i~~   67 (96)
T d1p3da1           8 VQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAG---AKIYIGHAE--E-----------HIEG   67 (96)
T ss_dssp             CCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTT---CEEEESCCG--G-----------GGTT
T ss_pred             CCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCC---CeEEECCcc--c-----------cCCC
Confidence            4667777654 444 5679999999999999998865433   3443333   333322211  1           1236


Q ss_pred             ccEEEEccccC
Q 039097           85 LDILVNNAGIT   95 (290)
Q Consensus        85 id~li~~Ag~~   95 (290)
                      .|.+|...++-
T Consensus        68 ~d~vV~S~AI~   78 (96)
T d1p3da1          68 ASVVVVSSAIK   78 (96)
T ss_dssp             CSEEEECTTSC
T ss_pred             CCEEEECCCcC
Confidence            79999999974

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=86.00  E-value=0.34  Score=39.23  Aligned_cols=35  Identities=23%  Similarity=0.223  Sum_probs=29.3

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      +-|+|+|.||+ --|...|.+|+++|++|+++.+++
T Consensus        29 ~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            34688888875 459999999999999999998765

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.34  E-value=1.7  Score=38.32  Aligned_cols=75  Identities=12%  Similarity=0.058  Sum_probs=53.0

Q ss_pred             CcE-EEEecCCCchhHHHHHHHHHC-CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            6 KRY-AVVTGANKGIGYEVVRQLALN-GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         6 ~k~-~lITGgs~gIG~aia~~L~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      +|+ .++++.||..|.|.+..|... +.+|+++..+..--+--..++....+++++.+.+| .+.++++.+++++-..
T Consensus       150 ~~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~~~~Nv~~i~v~-G~fDDcq~~vk~~f~d  226 (511)
T d1kl7a_         150 KKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVT-GTFDNCQDIVKAIFGD  226 (511)
T ss_dssp             CCCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHCCCTTEEEEEES-SCHHHHHHHHHHHHHC
T ss_pred             CceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhcCCceEEEEEec-cChHHHHHHHHHHHhh
Confidence            444 455555578999999999855 67888887653332333345555455679999999 6889999999988754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.24  E-value=1.4  Score=33.41  Aligned_cols=76  Identities=18%  Similarity=0.005  Sum_probs=55.6

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      +.+||=.|++.|.   ++..|++.|++|+.+|.+++.++.+.+.....+ ..+..+..|..+..     +     .-+..
T Consensus        38 ~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~-~~~~~~~~d~~~l~-----~-----~~~~f  103 (226)
T d1ve3a1          38 RGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLS-----F-----EDKTF  103 (226)
T ss_dssp             CCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCC-----S-----CTTCE
T ss_pred             CCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccc-cccccccccccccc-----c-----cCcCc
Confidence            4578889988876   667888899999999999888887776665554 34677778877643     0     11378


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |+|+....+.
T Consensus       104 D~I~~~~~l~  113 (226)
T d1ve3a1         104 DYVIFIDSIV  113 (226)
T ss_dssp             EEEEEESCGG
T ss_pred             eEEEEecchh
Confidence            9999876543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=85.05  E-value=0.53  Score=33.32  Aligned_cols=34  Identities=15%  Similarity=0.061  Sum_probs=28.9

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      +.++|.|| |.||.++|..|.+.|.+|.++.+.+.
T Consensus        27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            56777764 79999999999999999999987653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.81  E-value=1.9  Score=32.31  Aligned_cols=80  Identities=9%  Similarity=0.104  Sum_probs=54.2

Q ss_pred             CCCcEEE-EecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHh
Q 039097            4 TAKRYAV-VTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRS   80 (290)
Q Consensus         4 ~~~k~~l-ITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (290)
                      .+|+++| +..|+|.+|.+    .+.+|+ +|+.++.+....+.+.+.++..+ ..++.++..|+.+      +++++..
T Consensus        40 ~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~  109 (182)
T d2fhpa1          40 FDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYE  109 (182)
T ss_dssp             CSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHH
T ss_pred             cCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhcc
Confidence            4566655 44566778875    445887 69999999887777666665443 2368888888743      4555544


Q ss_pred             hcCCccEEEEccc
Q 039097           81 HFGKLDILVNNAG   93 (290)
Q Consensus        81 ~~~~id~li~~Ag   93 (290)
                      +-.+.|+++..+-
T Consensus       110 ~~~~fDlIflDPP  122 (182)
T d2fhpa1         110 EKLQFDLVLLDPP  122 (182)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceEEechh
Confidence            4457999987764

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.46  E-value=1.8  Score=33.24  Aligned_cols=78  Identities=9%  Similarity=0.023  Sum_probs=53.8

Q ss_pred             CCcEEEEecCCCc-hhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-CCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAVVTGANKG-IGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-FDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~lITGgs~g-IG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .+.++|=.|.+.| +...+++.+...+++|+.+|.++..++.+.+.+.... ...+.....|..+.+            +
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~------------~  106 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVE------------I  106 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCC------------C
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccc------------c
Confidence            3557777777654 5566776666678999999999999888888776554 335677777766432            2


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      ...|+++.+...
T Consensus       107 ~~~d~i~~~~~l  118 (225)
T d1im8a_         107 KNASMVILNFTL  118 (225)
T ss_dssp             CSEEEEEEESCG
T ss_pred             ccceeeEEeeec
Confidence            356777665543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.34  E-value=0.5  Score=36.09  Aligned_cols=31  Identities=13%  Similarity=0.187  Sum_probs=26.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      |+|.| +|--|...|.+|+++|.+|+++.+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67776 56779999999999999999998875

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.09  E-value=1.9  Score=33.51  Aligned_cols=81  Identities=11%  Similarity=-0.040  Sum_probs=60.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcC-----CCcEEEEEeeCCCHHHHHHHHHHHH
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSG-----FDNVIFHQLDVADPAAIHSVADFIR   79 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (290)
                      .|.+||-.|.++|--.++.-++.....+|+.++++++.++.+.+.++...     ..++.++..|.....          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            36699999999998888888888888899999999988887777765432     235777778865321          


Q ss_pred             hhcCCccEEEEccccC
Q 039097           80 SHFGKLDILVNNAGIT   95 (290)
Q Consensus        80 ~~~~~id~li~~Ag~~   95 (290)
                      .....+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124799999998853

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=84.06  E-value=0.54  Score=36.79  Aligned_cols=37  Identities=32%  Similarity=0.368  Sum_probs=30.7

Q ss_pred             CCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            4 TAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         4 ~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      -++|+++|.||+ --|.+.|..|+++|++|.+..++..
T Consensus        47 ~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEccc-HHHHHHHHHHHHhccceeeEeeccc
Confidence            357889999875 4589999999999999999987653

>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.55  E-value=4.6  Score=30.21  Aligned_cols=50  Identities=14%  Similarity=0.013  Sum_probs=28.2

Q ss_pred             CCcCCCcEEEEecCCC-c-------hhHHHHHHHHHCCCeEEEEecCcccHHHHHHHH
Q 039097            1 MAETAKRYAVVTGANK-G-------IGYEVVRQLALNGIITVLTARDEKGGLEAVEKL   50 (290)
Q Consensus         1 m~~~~~k~~lITGgs~-g-------IG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l   50 (290)
                      |.+-+-|++.|.|+++ +       ....+++.|+++|+.|+--+-...--..+.+..
T Consensus         1 ~~~~~~k~v~Vf~gs~~~~~~~~~~~a~~lg~~la~~g~~lV~GGG~~GlMga~a~ga   58 (183)
T d2q4oa1           1 MQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAV   58 (183)
T ss_dssp             CCCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHH
T ss_pred             CCccCCceEEEECcCCCCcCCHHHHHHHHHHHHHHHcCCeEEECCCCcchHHHHHHHH
Confidence            4444456677776654 2       256677777777777666555444333333333

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=83.34  E-value=0.54  Score=32.96  Aligned_cols=35  Identities=29%  Similarity=0.308  Sum_probs=29.1

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      .|.++|.| +|.+|.++|..|.+.|++|.+..|.+.
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence            35666665 579999999999999999999988753

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=82.24  E-value=0.93  Score=33.04  Aligned_cols=33  Identities=12%  Similarity=0.142  Sum_probs=24.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC----CeEEEEecCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNG----IITVLTARDE   40 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g----~~Vi~~~r~~   40 (290)
                      ++.|.||+|-+|..+.+.|+++.    ..+...+++.
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            57788999999999999888763    2566665543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.18  E-value=0.49  Score=37.98  Aligned_cols=33  Identities=24%  Similarity=0.275  Sum_probs=28.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      .|+|.||+ -.|..+|..|++.|++|+++.|+++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47788776 7899999999999999999998863

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=81.95  E-value=1.8  Score=32.14  Aligned_cols=78  Identities=10%  Similarity=0.092  Sum_probs=45.1

Q ss_pred             CCcEEEE-ecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcC
Q 039097            5 AKRYAVV-TGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFG   83 (290)
Q Consensus         5 ~~k~~lI-TGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   83 (290)
                      +|+++|= ..|+|.+|.    .++.+|++|+.++.++...+.+.+.++..+-. ..+..   .+.+.   +.........
T Consensus        41 ~g~~vLDl~~G~G~~~i----~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~-~~v~~---~~~d~---~~~~~~~~~~  109 (171)
T d1ws6a1          41 RRGRFLDPFAGSGAVGL----EAASEGWEAVLVEKDPEAVRLLKENVRRTGLG-ARVVA---LPVEV---FLPEAKAQGE  109 (171)
T ss_dssp             TCCEEEEETCSSCHHHH----HHHHTTCEEEEECCCHHHHHHHHHHHHHHTCC-CEEEC---SCHHH---HHHHHHHTTC
T ss_pred             CCCeEEEeccccchhhh----hhhhccchhhhcccCHHHHhhhhHHHHhhccc-cceee---eehhc---ccccccccCC
Confidence            4555554 445555554    45567999999999988887776666554422 12222   22222   2222233335


Q ss_pred             CccEEEEccc
Q 039097           84 KLDILVNNAG   93 (290)
Q Consensus        84 ~id~li~~Ag   93 (290)
                      +.|+++.+.-
T Consensus       110 ~fD~If~DPP  119 (171)
T d1ws6a1         110 RFTVAFMAPP  119 (171)
T ss_dssp             CEEEEEECCC
T ss_pred             ccceeEEccc
Confidence            7999998864

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=81.80  E-value=1.9  Score=33.35  Aligned_cols=77  Identities=14%  Similarity=0.058  Sum_probs=57.0

Q ss_pred             CcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhcCCc
Q 039097            6 KRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHFGKL   85 (290)
Q Consensus         6 ~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   85 (290)
                      |.+||=.|++.|.   ++..|++.+.+|+.++.++..++.+.+.....+-.++.+++.|..+..    +-      -+.+
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~----~~------~~~f   83 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP----FP------DDSF   83 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC----SC------TTCE
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc----cc------cccc
Confidence            6788888888774   345666778899999999988888777776665567999999987643    11      1479


Q ss_pred             cEEEEccccC
Q 039097           86 DILVNNAGIT   95 (290)
Q Consensus        86 d~li~~Ag~~   95 (290)
                      |+++.+-.+.
T Consensus        84 D~v~~~~~l~   93 (234)
T d1xxla_          84 DIITCRYAAH   93 (234)
T ss_dssp             EEEEEESCGG
T ss_pred             ceeeeeceee
Confidence            9888876543

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=81.74  E-value=0.49  Score=32.40  Aligned_cols=38  Identities=13%  Similarity=0.078  Sum_probs=30.7

Q ss_pred             cCCCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcc
Q 039097            3 ETAKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEK   41 (290)
Q Consensus         3 ~~~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~   41 (290)
                      +++||+|+|.|++ .=|.-+|..|+..+.+|++..|+..
T Consensus        29 ~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          29 LFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            4789999999986 6678899999988888777776643

>d2fpoa1 c.66.1.46 (A:10-192) Methylase YhhF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methylase YhhF
species: Escherichia coli [TaxId: 562]

Probab=81.40  E-value=2  Score=32.17  Aligned_cols=77  Identities=9%  Similarity=0.035  Sum_probs=50.5

Q ss_pred             CCcEEE-EecCCCchhHHHHHHHHHCCC-eEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhhc
Q 039097            5 AKRYAV-VTGANKGIGYEVVRQLALNGI-ITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSHF   82 (290)
Q Consensus         5 ~~k~~l-ITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (290)
                      .++++| +..|+|.+|.+    .+.+|+ +|+.++.++...+...+.++.....++.++..|+.+      +   +....
T Consensus        43 ~~~~vLDlfaGsG~~gie----alsrGa~~v~~VE~~~~a~~~~k~N~~~~~~~~~~ii~~d~~~------~---l~~~~  109 (183)
T d2fpoa1          43 VDAQCLDCFAGSGALGLE----ALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMS------F---LAQKG  109 (183)
T ss_dssp             TTCEEEETTCTTCHHHHH----HHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHH------H---HSSCC
T ss_pred             chhhhhhhhccccceeee----EEecCcceeEEEEEeechhhHHHHHHhhccccceeeeeecccc------c---ccccc
Confidence            344444 34556666665    445887 799999998888877777765555567788777422      2   22233


Q ss_pred             CCccEEEEcccc
Q 039097           83 GKLDILVNNAGI   94 (290)
Q Consensus        83 ~~id~li~~Ag~   94 (290)
                      .+.|+++...-+
T Consensus       110 ~~fDlIf~DPPY  121 (183)
T d2fpoa1         110 TPHNIVFVDPPF  121 (183)
T ss_dssp             CCEEEEEECCSS
T ss_pred             cccCEEEEcCcc
Confidence            478999998653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.91  E-value=1.1  Score=32.49  Aligned_cols=34  Identities=26%  Similarity=0.229  Sum_probs=26.6

Q ss_pred             cEEEEecCCCchhHHHHHHHHHCCC---eEEEEecCc
Q 039097            7 RYAVVTGANKGIGYEVVRQLALNGI---ITVLTARDE   40 (290)
Q Consensus         7 k~~lITGgs~gIG~aia~~L~~~g~---~Vi~~~r~~   40 (290)
                      -.|.|.||+|.+|..+++.|.++++   ++..++.+.
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            4689999999999999999986653   666655443

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=80.86  E-value=0.76  Score=35.46  Aligned_cols=34  Identities=24%  Similarity=0.194  Sum_probs=28.7

Q ss_pred             cEEEEecCCCchhHH-----HHHHHHHCCCeEEEEecCc
Q 039097            7 RYAVVTGANKGIGYE-----VVRQLALNGIITVLTARDE   40 (290)
Q Consensus         7 k~~lITGgs~gIG~a-----ia~~L~~~g~~Vi~~~r~~   40 (290)
                      |++.|+++-||.|+.     +|..|+++|.+|.++|-++
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            789999999999875     5778888999999998664

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.85  E-value=2.1  Score=31.29  Aligned_cols=83  Identities=12%  Similarity=0.144  Sum_probs=51.9

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeC---CCHHHHHHHHHHHHhh
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDV---ADPAAIHSVADFIRSH   81 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl---~~~~~v~~~~~~~~~~   81 (290)
                      +|+++.|.+.+||.|--++..+...|.++--.  + +...+.++++.....  ..--.+|+   .+.+...++++.+.+.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l--~-~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLATL--E-EKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEECCC--C-HHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccCCC--C-HHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC
Confidence            68999999999999999999999999665322  2 222232333322110  11123555   3556677777766655


Q ss_pred             cCCccEEEEccc
Q 039097           82 FGKLDILVNNAG   93 (290)
Q Consensus        82 ~~~id~li~~Ag   93 (290)
                       +.+|.++....
T Consensus        77 -~~vd~v~v~~~   87 (163)
T d2csua3          77 -PNVDMLIAICV   87 (163)
T ss_dssp             -TTCSEEEEEEE
T ss_pred             -CCcCEEEEeec
Confidence             67898765544

>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein YvdD
species: Bacillus subtilis [TaxId: 1423]

Probab=80.70  E-value=2.8  Score=31.38  Aligned_cols=12  Identities=25%  Similarity=0.268  Sum_probs=8.9

Q ss_pred             ccEEEEccccCC
Q 039097           85 LDILVNNAGITG   96 (290)
Q Consensus        85 id~li~~Ag~~~   96 (290)
                      =|++|...|-.+
T Consensus        98 sdafI~lPGG~G  109 (179)
T d1t35a_          98 ADGFISMPGGFG  109 (179)
T ss_dssp             CSEEEECSCCHH
T ss_pred             cCeEEEecCccc
Confidence            588888888653

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=80.50  E-value=3.4  Score=31.35  Aligned_cols=87  Identities=15%  Similarity=0.144  Sum_probs=53.2

Q ss_pred             cE-EEEecCCCchhH-----HHHHHHHHC----CCeEEEEecCcccHHHHHHHHHh----cC---------CCcEEEEEe
Q 039097            7 RY-AVVTGANKGIGY-----EVVRQLALN----GIITVLTARDEKGGLEAVEKLKH----SG---------FDNVIFHQL   63 (290)
Q Consensus         7 k~-~lITGgs~gIG~-----aia~~L~~~----g~~Vi~~~r~~~~~~~~~~~l~~----~~---------~~~~~~~~~   63 (290)
                      ++ ++|.||+|.+-+     ++-..+...    ...|+.++|+....++..+.+.+    ..         -.++.++..
T Consensus         5 ~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~   84 (195)
T d1h9aa1           5 KTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAH   84 (195)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEEC
T ss_pred             ceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeE
Confidence            44 457899998864     444444433    35789999987766654444322    11         136888999


Q ss_pred             eCCCHHHHHHHHHHH---HhhcC-CccEEEEccc
Q 039097           64 DVADPAAIHSVADFI---RSHFG-KLDILVNNAG   93 (290)
Q Consensus        64 Dl~~~~~v~~~~~~~---~~~~~-~id~li~~Ag   93 (290)
                      |+.+.++..++.+.+   .+..+ .-..+++.|=
T Consensus        85 ~~~~~~~~~~l~~~l~~~~~~~~~~~~rifYLAv  118 (195)
T d1h9aa1          85 DVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSV  118 (195)
T ss_dssp             CTTCTTTHHHHHHHHHHHHHHHTCCSCEEEEECS
T ss_pred             eeccHhhHHHHHHHHHHHHhhcCCCcceEEEEec
Confidence            998877666655544   33333 2345666663

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=80.47  E-value=0.78  Score=33.45  Aligned_cols=35  Identities=23%  Similarity=0.213  Sum_probs=29.0

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCC--eEEEEecCc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGI--ITVLTARDE   40 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~--~Vi~~~r~~   40 (290)
                      .||+++|.|| |..|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999987 5679999999999885  788887765

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.36  E-value=0.76  Score=34.88  Aligned_cols=35  Identities=11%  Similarity=-0.049  Sum_probs=27.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCeEEEEecCcccHHH
Q 039097            9 AVVTGANKGIGYEVVRQLALNGIITVLTARDEKGGLE   45 (290)
Q Consensus         9 ~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~~~~~~   45 (290)
                      +.|.| .|.+|..+|..|+ +|++|+..|.++...+.
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~   37 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDK   37 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHH
Confidence            55564 8999999997664 79999999999776543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=80.10  E-value=0.88  Score=37.44  Aligned_cols=35  Identities=23%  Similarity=0.261  Sum_probs=28.7

Q ss_pred             CCcEEEEecCCCchhHHHHHHHHHCCCeEEEEecCc
Q 039097            5 AKRYAVVTGANKGIGYEVVRQLALNGIITVLTARDE   40 (290)
Q Consensus         5 ~~k~~lITGgs~gIG~aia~~L~~~g~~Vi~~~r~~   40 (290)
                      +.|+++|.||+ --|..+|.+|+++|++|.++.++.
T Consensus         1 k~KKI~IIGaG-~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAG-FSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCS-HHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHhCCCCEEEEECCC
Confidence            36788888864 458889999999999999998765

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=80.09  E-value=0.83  Score=36.83  Aligned_cols=32  Identities=19%  Similarity=0.257  Sum_probs=26.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-eEEEEecCc
Q 039097            8 YAVVTGANKGIGYEVVRQLALNGI-ITVLTARDE   40 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~L~~~g~-~Vi~~~r~~   40 (290)
                      .|+|.|| |-+|.++|.+|+++|. .|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4677765 5899999999999997 599998863

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=80.01  E-value=8.7  Score=27.81  Aligned_cols=75  Identities=12%  Similarity=-0.023  Sum_probs=40.4

Q ss_pred             EEEEecCCCchhHHHHHH-HHH-C----CCeEEEEecCcccHHHHHHHHHhcCCCcEEEEEeeCCCHHHHHHHHHHHHhh
Q 039097            8 YAVVTGANKGIGYEVVRQ-LAL-N----GIITVLTARDEKGGLEAVEKLKHSGFDNVIFHQLDVADPAAIHSVADFIRSH   81 (290)
Q Consensus         8 ~~lITGgs~gIG~aia~~-L~~-~----g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   81 (290)
                      ++.|.||++ +|...+-. |+. .    ..++++.|.++++++...+...........+.   .+..  ..+.+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~---~t~~--~~~~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL---ISDT--FEGAV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEE---ECSS--HHHHH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEE---EecC--ccccc------
Confidence            467888754 55444422 222 1    34899999999887754433322211112211   1211  11222      


Q ss_pred             cCCccEEEEccccC
Q 039097           82 FGKLDILVNNAGIT   95 (290)
Q Consensus        82 ~~~id~li~~Ag~~   95 (290)
                       ..-|++|..||..
T Consensus        70 -~~aDvVVita~~~   82 (162)
T d1up7a1          70 -VDAKYVIFQFRPG   82 (162)
T ss_dssp             -TTCSEEEECCCTT
T ss_pred             -CCCCEEEEecccC
Confidence             2679999999964