Query 039105
Match_columns 493
No_of_seqs 161 out of 1955
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 10:20:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039105.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039105hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1s3e_A Amine oxidase [flavin-c 100.0 3.1E-45 1E-49 375.8 38.5 419 26-465 2-457 (520)
2 2yg5_A Putrescine oxidase; oxi 100.0 1.3E-43 4.5E-48 358.0 33.5 419 27-462 4-451 (453)
3 2vvm_A Monoamine oxidase N; FA 100.0 8E-43 2.7E-47 356.1 34.9 410 28-464 39-487 (495)
4 4gut_A Lysine-specific histone 100.0 2E-41 6.9E-46 356.5 42.6 422 27-460 335-775 (776)
5 2z3y_A Lysine-specific histone 100.0 3.3E-41 1.1E-45 353.2 43.1 424 26-464 105-660 (662)
6 1rsg_A FMS1 protein; FAD bindi 100.0 9.5E-42 3.2E-46 349.2 36.1 426 27-465 7-510 (516)
7 2xag_A Lysine-specific histone 100.0 8.3E-41 2.8E-45 353.7 42.7 424 26-464 276-831 (852)
8 1b37_A Protein (polyamine oxid 100.0 4.9E-40 1.7E-44 333.1 44.5 426 27-466 3-462 (472)
9 3k7m_X 6-hydroxy-L-nicotine ox 100.0 1.1E-39 3.6E-44 327.3 34.3 402 28-460 1-424 (431)
10 2iid_A L-amino-acid oxidase; f 100.0 4.1E-39 1.4E-43 328.9 31.6 423 25-464 30-486 (498)
11 3i6d_A Protoporphyrinogen oxid 100.0 1.7E-38 5.9E-43 322.2 29.2 406 27-462 4-468 (470)
12 2ivd_A PPO, PPOX, protoporphyr 100.0 5.5E-38 1.9E-42 319.0 29.0 403 26-464 14-475 (478)
13 2jae_A L-amino acid oxidase; o 100.0 5.4E-37 1.9E-41 312.5 36.1 423 25-464 8-487 (489)
14 1sez_A Protoporphyrinogen oxid 100.0 2E-36 6.7E-41 309.6 27.4 406 25-464 10-495 (504)
15 3lov_A Protoporphyrinogen oxid 100.0 4.1E-37 1.4E-41 312.3 22.1 402 28-464 4-467 (475)
16 3ka7_A Oxidoreductase; structu 100.0 8.6E-36 2.9E-40 298.3 28.7 396 29-459 1-424 (425)
17 4dgk_A Phytoene dehydrogenase; 100.0 5.7E-36 1.9E-40 306.0 25.0 429 28-465 1-494 (501)
18 4gde_A UDP-galactopyranose mut 100.0 4.3E-35 1.5E-39 300.5 25.9 404 27-460 9-477 (513)
19 3nks_A Protoporphyrinogen oxid 100.0 9.7E-35 3.3E-39 295.1 25.3 398 28-461 2-473 (477)
20 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.5E-34 5.1E-39 280.6 24.5 322 28-461 1-341 (342)
21 3ayj_A Pro-enzyme of L-phenyla 100.0 1.2E-34 4E-39 298.4 23.1 244 220-465 338-682 (721)
22 3nrn_A Uncharacterized protein 100.0 6.5E-33 2.2E-37 276.9 29.9 397 29-474 1-413 (421)
23 4dsg_A UDP-galactopyranose mut 100.0 1.5E-32 5.1E-37 277.6 26.3 402 26-459 7-452 (484)
24 2b9w_A Putative aminooxidase; 100.0 7.2E-30 2.5E-34 255.2 23.2 391 26-459 4-423 (424)
25 1yvv_A Amine oxidase, flavin-c 100.0 4.5E-27 1.6E-31 227.4 28.0 321 28-463 2-328 (336)
26 1v0j_A UDP-galactopyranose mut 99.9 1.4E-26 4.9E-31 228.3 13.1 248 25-320 4-275 (399)
27 1i8t_A UDP-galactopyranose mut 99.9 2.4E-25 8.1E-30 216.9 18.0 244 28-321 1-262 (367)
28 2bi7_A UDP-galactopyranose mut 99.9 4.3E-24 1.5E-28 209.2 19.8 234 28-316 3-260 (384)
29 3hdq_A UDP-galactopyranose mut 99.9 3.6E-23 1.2E-27 201.2 23.2 340 25-460 26-389 (397)
30 2bcg_G Secretory pathway GDP d 99.9 2E-21 6.8E-26 194.9 21.8 242 25-279 8-299 (453)
31 1d5t_A Guanine nucleotide diss 99.8 2.6E-19 9E-24 178.3 18.2 234 25-280 3-290 (433)
32 3p1w_A Rabgdi protein; GDI RAB 99.8 6.1E-20 2.1E-24 181.8 13.4 242 25-279 17-313 (475)
33 3kkj_A Amine oxidase, flavin-c 99.8 6.9E-18 2.4E-22 158.7 26.9 58 28-85 2-59 (336)
34 2e1m_A L-glutamate oxidase; L- 99.8 8.5E-19 2.9E-23 169.0 14.1 80 25-106 41-131 (376)
35 2e1m_C L-glutamate oxidase; L- 99.6 3.9E-15 1.3E-19 128.5 8.9 113 349-463 37-153 (181)
36 3oz2_A Digeranylgeranylglycero 99.6 1.4E-13 4.8E-18 135.5 19.2 39 27-65 3-41 (397)
37 3rp8_A Flavoprotein monooxygen 99.5 8.7E-13 3E-17 130.5 20.9 50 231-281 133-182 (407)
38 1vg0_A RAB proteins geranylger 99.5 1.1E-13 3.6E-18 141.1 14.1 58 219-276 368-433 (650)
39 3fmw_A Oxygenase; mithramycin, 99.5 1.9E-12 6.3E-17 132.9 20.8 44 238-281 162-208 (570)
40 3i3l_A Alkylhalidase CMLS; fla 99.5 2.6E-12 8.8E-17 132.0 21.8 38 27-64 22-59 (591)
41 3ihg_A RDME; flavoenzyme, anth 99.5 2.6E-12 8.7E-17 131.7 21.2 60 27-103 4-63 (535)
42 3cgv_A Geranylgeranyl reductas 99.5 5.9E-12 2E-16 124.0 21.6 38 28-65 4-41 (397)
43 1y56_B Sarcosine oxidase; dehy 99.5 1.1E-11 3.6E-16 121.5 23.2 51 229-280 153-205 (382)
44 3v76_A Flavoprotein; structura 99.4 4.4E-13 1.5E-17 132.1 12.4 43 25-67 24-66 (417)
45 2qa1_A PGAE, polyketide oxygen 99.4 3.3E-12 1.1E-16 129.2 18.5 63 24-103 7-69 (500)
46 3nix_A Flavoprotein/dehydrogen 99.4 2.4E-12 8.4E-17 127.8 16.8 50 231-280 112-166 (421)
47 2qa2_A CABE, polyketide oxygen 99.4 1.8E-11 6.1E-16 123.8 23.0 45 238-282 121-168 (499)
48 3atr_A Conserved archaeal prot 99.4 4.9E-12 1.7E-16 126.8 18.1 38 26-63 4-41 (453)
49 4hb9_A Similarities with proba 99.4 1.1E-11 3.9E-16 122.5 20.6 52 231-282 114-168 (412)
50 3dme_A Conserved exported prot 99.4 2.9E-12 9.9E-17 124.8 15.7 43 26-68 2-44 (369)
51 1ryi_A Glycine oxidase; flavop 99.4 8E-12 2.7E-16 122.4 18.5 51 229-280 168-219 (382)
52 3dje_A Fructosyl amine: oxygen 99.4 4E-12 1.4E-16 127.0 15.0 53 228-280 164-221 (438)
53 3nyc_A D-arginine dehydrogenas 99.4 6E-13 2.1E-17 130.3 8.6 52 228-280 157-209 (381)
54 3ps9_A TRNA 5-methylaminomethy 99.4 2.1E-12 7.2E-17 135.9 13.2 53 228-280 420-473 (676)
55 3e1t_A Halogenase; flavoprotei 99.4 1.1E-11 3.8E-16 126.1 16.7 37 27-63 6-42 (512)
56 3pvc_A TRNA 5-methylaminomethy 99.3 5E-12 1.7E-16 133.2 13.5 53 228-280 415-469 (689)
57 1k0i_A P-hydroxybenzoate hydro 99.3 3E-11 1E-15 118.9 15.1 52 231-282 109-165 (394)
58 2i0z_A NAD(FAD)-utilizing dehy 99.3 3.3E-11 1.1E-15 120.4 13.3 41 27-67 25-65 (447)
59 4ap3_A Steroid monooxygenase; 99.3 3E-11 1E-15 123.3 13.1 57 26-82 19-75 (549)
60 2gqf_A Hypothetical protein HI 99.2 5E-11 1.7E-15 117.0 13.1 41 27-67 3-43 (401)
61 2vou_A 2,6-dihydroxypyridine h 99.2 6.9E-11 2.3E-15 116.3 13.9 45 237-281 110-154 (397)
62 2uzz_A N-methyl-L-tryptophan o 99.2 6.4E-11 2.2E-15 115.5 13.5 52 228-280 152-204 (372)
63 2xdo_A TETX2 protein; tetracyc 99.2 6.8E-11 2.3E-15 116.4 12.9 45 238-282 140-184 (398)
64 1y0p_A Fumarate reductase flav 99.2 3.7E-10 1.3E-14 116.4 18.8 43 25-67 123-165 (571)
65 2oln_A NIKD protein; flavoprot 99.2 6.6E-11 2.3E-15 116.5 12.7 51 228-279 156-207 (397)
66 2r0c_A REBC; flavin adenine di 99.2 6.2E-10 2.1E-14 114.0 19.9 59 28-103 26-84 (549)
67 2dkh_A 3-hydroxybenzoate hydro 99.2 4.7E-10 1.6E-14 117.0 18.3 39 26-64 30-69 (639)
68 2gf3_A MSOX, monomeric sarcosi 99.2 1.1E-10 3.6E-15 114.6 12.5 52 228-280 153-205 (389)
69 2gag_B Heterotetrameric sarcos 99.2 8.4E-11 2.9E-15 116.0 11.9 52 228-280 177-230 (405)
70 1w4x_A Phenylacetone monooxyge 99.2 9E-11 3.1E-15 120.1 12.4 53 25-77 13-65 (542)
71 2gmh_A Electron transfer flavo 99.2 2.3E-09 7.8E-14 110.4 22.4 40 27-66 34-79 (584)
72 4at0_A 3-ketosteroid-delta4-5a 99.2 3.2E-10 1.1E-14 115.2 15.2 41 27-67 40-80 (510)
73 3gwf_A Cyclohexanone monooxyge 99.2 2E-10 6.8E-15 117.0 13.5 56 27-82 7-63 (540)
74 2zbw_A Thioredoxin reductase; 99.2 1.5E-10 5.1E-15 111.1 11.9 43 26-68 3-45 (335)
75 1qo8_A Flavocytochrome C3 fuma 99.2 5.9E-10 2E-14 114.7 17.1 43 25-67 118-160 (566)
76 3ab1_A Ferredoxin--NADP reduct 99.1 2.3E-10 7.8E-15 111.1 12.3 44 25-68 11-54 (360)
77 3nlc_A Uncharacterized protein 99.1 1.3E-10 4.6E-15 117.5 10.8 41 27-67 106-146 (549)
78 2x3n_A Probable FAD-dependent 99.1 1.1E-10 3.9E-15 114.9 9.2 52 230-281 112-167 (399)
79 4a9w_A Monooxygenase; baeyer-v 99.1 2.8E-10 9.6E-15 110.0 11.4 41 28-68 3-43 (357)
80 1pj5_A N,N-dimethylglycine oxi 99.1 6.7E-10 2.3E-14 119.5 14.6 52 228-280 154-207 (830)
81 1rp0_A ARA6, thiazole biosynth 99.1 2.9E-10 1E-14 106.2 10.2 41 27-67 38-79 (284)
82 3uox_A Otemo; baeyer-villiger 99.1 1.9E-10 6.4E-15 117.3 9.5 54 26-79 7-60 (545)
83 3lzw_A Ferredoxin--NADP reduct 99.1 3.1E-10 1.1E-14 108.6 10.4 42 27-68 6-47 (332)
84 3f8d_A Thioredoxin reductase ( 99.1 5.8E-10 2E-14 106.2 12.0 40 27-68 14-53 (323)
85 3axb_A Putative oxidoreductase 99.1 8.3E-11 2.8E-15 117.7 5.9 39 27-65 22-61 (448)
86 3o0h_A Glutathione reductase; 99.1 3.2E-09 1.1E-13 107.1 16.9 49 231-279 238-287 (484)
87 3da1_A Glycerol-3-phosphate de 99.1 4.4E-10 1.5E-14 115.2 10.5 42 26-67 16-57 (561)
88 4fk1_A Putative thioredoxin re 99.1 1.1E-09 3.7E-14 103.6 12.4 41 25-66 3-43 (304)
89 3itj_A Thioredoxin reductase 1 99.0 5.7E-10 2E-14 107.0 10.5 44 25-68 19-66 (338)
90 2gv8_A Monooxygenase; FMO, FAD 99.0 1.5E-09 5.2E-14 108.4 13.6 43 26-68 4-48 (447)
91 1pn0_A Phenol 2-monooxygenase; 99.0 1.6E-08 5.4E-13 105.6 21.8 36 28-63 8-48 (665)
92 2qcu_A Aerobic glycerol-3-phos 99.0 1.8E-09 6.2E-14 109.4 13.5 39 27-65 2-40 (501)
93 4a5l_A Thioredoxin reductase; 99.0 1.5E-09 5E-14 103.1 11.9 41 25-66 1-41 (314)
94 3alj_A 2-methyl-3-hydroxypyrid 99.0 1.3E-09 4.4E-14 106.5 11.6 39 27-65 10-48 (379)
95 3c96_A Flavin-containing monoo 99.0 8.5E-10 2.9E-14 109.0 10.4 38 27-64 3-41 (410)
96 3jsk_A Cypbp37 protein; octame 99.0 1.3E-09 4.5E-14 102.8 9.9 41 27-67 78-120 (344)
97 2q0l_A TRXR, thioredoxin reduc 99.0 3.5E-09 1.2E-13 100.4 12.1 40 28-68 1-41 (311)
98 1d4d_A Flavocytochrome C fumar 99.0 8.4E-09 2.9E-13 106.0 15.7 42 26-67 124-165 (572)
99 3cty_A Thioredoxin reductase; 99.0 3.2E-09 1.1E-13 101.0 11.6 44 24-68 12-55 (319)
100 2q7v_A Thioredoxin reductase; 98.9 3.4E-09 1.2E-13 101.1 11.5 43 25-68 5-47 (325)
101 2cul_A Glucose-inhibited divis 98.9 7.2E-09 2.5E-13 93.6 12.3 34 28-61 3-36 (232)
102 2bry_A NEDD9 interacting prote 98.9 1.6E-09 5.4E-14 109.4 8.6 41 25-65 89-129 (497)
103 2ywl_A Thioredoxin reductase r 98.9 8.7E-09 3E-13 89.2 11.9 40 238-279 70-109 (180)
104 3c4n_A Uncharacterized protein 98.9 1E-09 3.5E-14 108.1 6.7 52 228-280 175-236 (405)
105 2a87_A TRXR, TR, thioredoxin r 98.9 4.8E-09 1.6E-13 100.6 11.2 42 25-67 11-52 (335)
106 3d1c_A Flavin-containing putat 98.9 3.4E-09 1.2E-13 103.0 9.9 40 28-68 4-44 (369)
107 2gjc_A Thiazole biosynthetic e 98.9 7.5E-09 2.6E-13 97.1 11.0 42 26-67 63-106 (326)
108 2rgh_A Alpha-glycerophosphate 98.9 4.3E-09 1.5E-13 108.1 10.0 39 27-65 31-69 (571)
109 2bs2_A Quinol-fumarate reducta 98.9 4.1E-08 1.4E-12 101.9 17.0 40 27-66 4-43 (660)
110 3l8k_A Dihydrolipoyl dehydroge 98.9 1.4E-08 4.9E-13 101.8 13.3 43 26-68 2-44 (466)
111 2wdq_A Succinate dehydrogenase 98.9 4.2E-08 1.4E-12 101.0 16.9 39 28-66 7-45 (588)
112 2h88_A Succinate dehydrogenase 98.9 4.6E-08 1.6E-12 100.8 17.2 40 27-66 17-56 (621)
113 3fbs_A Oxidoreductase; structu 98.9 1.8E-08 6.2E-13 94.6 13.0 35 28-62 2-36 (297)
114 2xve_A Flavin-containing monoo 98.9 9.8E-09 3.3E-13 102.8 11.7 41 29-69 3-49 (464)
115 3fpz_A Thiazole biosynthetic e 98.9 1.1E-09 3.9E-14 104.5 4.4 70 25-104 62-133 (326)
116 1trb_A Thioredoxin reductase; 98.8 1.1E-08 3.6E-13 97.4 10.6 40 27-67 4-43 (320)
117 1vdc_A NTR, NADPH dependent th 98.8 7.3E-09 2.5E-13 99.2 9.2 40 27-66 7-50 (333)
118 3r9u_A Thioredoxin reductase; 98.8 1.3E-08 4.6E-13 96.4 10.7 42 26-68 2-44 (315)
119 2e1m_B L-glutamate oxidase; L- 98.8 1.6E-10 5.6E-15 92.2 -2.1 108 265-387 4-112 (130)
120 1dxl_A Dihydrolipoamide dehydr 98.8 3.6E-08 1.2E-12 99.1 13.8 44 25-68 3-46 (470)
121 3lxd_A FAD-dependent pyridine 98.8 2.3E-08 8E-13 98.8 11.9 43 237-279 207-250 (415)
122 3ces_A MNMG, tRNA uridine 5-ca 98.8 1E-08 3.4E-13 104.7 9.1 49 231-280 130-181 (651)
123 1fl2_A Alkyl hydroperoxide red 98.8 2E-08 6.8E-13 95.0 10.7 38 28-67 1-38 (310)
124 2zxi_A TRNA uridine 5-carboxym 98.8 1.1E-08 3.9E-13 103.9 9.3 49 231-280 129-180 (637)
125 1chu_A Protein (L-aspartate ox 98.8 2.7E-08 9.3E-13 101.3 12.1 39 27-66 7-45 (540)
126 2e4g_A Tryptophan halogenase; 98.8 1.8E-08 6E-13 103.3 10.8 51 230-281 199-253 (550)
127 2aqj_A Tryptophan halogenase, 98.8 4E-08 1.4E-12 100.5 13.1 44 237-281 178-223 (538)
128 1ojt_A Surface protein; redox- 98.8 2.9E-08 9.8E-13 100.1 11.7 44 25-68 3-46 (482)
129 3s5w_A L-ornithine 5-monooxyge 98.8 1.8E-08 6E-13 101.2 9.9 39 27-65 29-72 (463)
130 1hyu_A AHPF, alkyl hydroperoxi 98.8 3.8E-08 1.3E-12 100.0 12.3 41 25-67 209-249 (521)
131 2weu_A Tryptophan 5-halogenase 98.8 6.8E-08 2.3E-12 98.2 14.0 44 237-281 186-231 (511)
132 1v59_A Dihydrolipoamide dehydr 98.8 1.8E-08 6.2E-13 101.5 9.6 43 26-68 3-45 (478)
133 1kf6_A Fumarate reductase flav 98.7 1.3E-07 4.3E-12 97.6 15.5 39 28-66 5-45 (602)
134 3fg2_P Putative rubredoxin red 98.7 7.2E-08 2.5E-12 94.8 12.4 43 237-279 197-240 (404)
135 2e5v_A L-aspartate oxidase; ar 98.7 7E-08 2.4E-12 96.7 12.3 36 30-66 1-36 (472)
136 3cp8_A TRNA uridine 5-carboxym 98.7 1.7E-08 5.9E-13 102.9 7.7 40 26-65 19-59 (641)
137 4gcm_A TRXR, thioredoxin reduc 98.7 1E-08 3.5E-13 97.2 5.1 40 28-68 6-45 (312)
138 3ics_A Coenzyme A-disulfide re 98.7 4E-08 1.4E-12 101.6 9.9 39 26-64 34-74 (588)
139 2pyx_A Tryptophan halogenase; 98.7 1.1E-07 3.6E-12 97.0 12.8 51 230-281 180-234 (526)
140 1ebd_A E3BD, dihydrolipoamide 98.7 1.1E-07 3.8E-12 95.1 12.2 41 27-68 2-42 (455)
141 3oc4_A Oxidoreductase, pyridin 98.6 6.8E-08 2.3E-12 96.5 9.3 36 29-64 3-40 (452)
142 2a8x_A Dihydrolipoyl dehydroge 98.6 1.4E-07 4.7E-12 94.6 11.6 40 28-68 3-42 (464)
143 1jnr_A Adenylylsulfate reducta 98.6 8.4E-07 2.9E-11 92.3 17.6 36 27-62 21-60 (643)
144 3klj_A NAD(FAD)-dependent dehy 98.6 1.4E-07 4.7E-12 92.0 9.7 39 26-64 7-45 (385)
145 3gyx_A Adenylylsulfate reducta 98.6 8.9E-07 3E-11 91.9 16.0 37 28-64 22-64 (662)
146 3h8l_A NADH oxidase; membrane 98.6 1.7E-07 5.8E-12 92.4 10.2 51 425-476 298-348 (409)
147 3iwa_A FAD-dependent pyridine 98.5 1.6E-07 5.4E-12 94.4 8.7 37 28-64 3-41 (472)
148 1c0p_A D-amino acid oxidase; a 98.5 7.7E-08 2.6E-12 93.2 6.0 40 25-64 3-42 (363)
149 3urh_A Dihydrolipoyl dehydroge 98.5 5.4E-08 1.9E-12 98.3 5.0 42 27-68 24-65 (491)
150 1q1r_A Putidaredoxin reductase 98.5 4E-07 1.4E-11 90.2 11.2 36 27-62 3-40 (431)
151 1y56_A Hypothetical protein PH 98.5 1.2E-07 4.2E-12 95.6 6.9 42 26-68 106-147 (493)
152 3h28_A Sulfide-quinone reducta 98.5 1E-07 3.5E-12 94.6 5.5 37 28-64 2-40 (430)
153 3ntd_A FAD-dependent pyridine 98.5 2.3E-07 8E-12 95.5 8.4 37 28-64 1-39 (565)
154 3kd9_A Coenzyme A disulfide re 98.5 3.5E-07 1.2E-11 91.3 8.9 37 28-64 3-41 (449)
155 3ef6_A Toluene 1,2-dioxygenase 98.5 5.2E-07 1.8E-11 88.8 10.0 40 238-279 71-110 (410)
156 3cgb_A Pyridine nucleotide-dis 98.4 3.4E-07 1.2E-11 92.1 8.5 37 28-64 36-74 (480)
157 3sx6_A Sulfide-quinone reducta 98.4 1.7E-07 5.9E-12 93.1 5.8 36 26-61 2-40 (437)
158 1nhp_A NADH peroxidase; oxidor 98.4 5.2E-07 1.8E-11 90.0 9.3 36 29-64 1-38 (447)
159 1mo9_A ORF3; nucleotide bindin 98.4 1.4E-07 4.9E-12 95.9 5.3 44 25-68 40-83 (523)
160 4dna_A Probable glutathione re 98.4 1.2E-07 4E-12 95.1 4.5 41 27-68 4-44 (463)
161 2vdc_G Glutamate synthase [NAD 98.4 2.1E-07 7.2E-12 92.6 5.1 43 26-68 120-162 (456)
162 2qae_A Lipoamide, dihydrolipoy 98.4 2.1E-07 7E-12 93.5 4.8 41 28-68 2-42 (468)
163 2bc0_A NADH oxidase; flavoprot 98.4 3.9E-07 1.3E-11 91.9 6.6 37 28-64 35-74 (490)
164 3lad_A Dihydrolipoamide dehydr 98.4 2.7E-07 9.1E-12 92.9 5.2 40 27-66 2-41 (476)
165 1zk7_A HGII, reductase, mercur 98.3 2.9E-07 9.9E-12 92.4 5.3 43 25-68 1-43 (467)
166 2cdu_A NADPH oxidase; flavoenz 98.3 1E-06 3.6E-11 87.9 9.3 36 29-64 1-38 (452)
167 2r9z_A Glutathione amide reduc 98.3 2.6E-07 8.9E-12 92.5 4.9 42 26-68 2-43 (463)
168 4b63_A L-ornithine N5 monooxyg 98.3 5.6E-07 1.9E-11 90.9 7.1 40 26-65 37-76 (501)
169 3dk9_A Grase, GR, glutathione 98.3 2.1E-07 7.3E-12 93.6 4.0 43 25-68 17-59 (478)
170 2v3a_A Rubredoxin reductase; a 98.3 3.7E-06 1.3E-10 82.0 12.5 43 237-279 200-242 (384)
171 1ges_A Glutathione reductase; 98.3 2.5E-07 8.5E-12 92.3 4.0 42 26-68 2-43 (450)
172 1zmd_A Dihydrolipoyl dehydroge 98.3 2.8E-07 9.7E-12 92.6 4.1 43 26-68 4-46 (474)
173 3g3e_A D-amino-acid oxidase; F 98.3 2.6E-07 8.8E-12 89.0 3.5 37 29-65 1-43 (351)
174 3qfa_A Thioredoxin reductase 1 98.3 4E-07 1.4E-11 92.5 5.0 44 25-68 29-80 (519)
175 2yqu_A 2-oxoglutarate dehydrog 98.3 3.7E-07 1.3E-11 91.3 4.7 41 28-68 1-41 (455)
176 3k30_A Histamine dehydrogenase 98.3 3.7E-07 1.3E-11 96.1 4.5 45 25-69 388-432 (690)
177 2yqu_A 2-oxoglutarate dehydrog 98.3 4.7E-06 1.6E-10 83.2 12.2 44 237-280 221-264 (455)
178 2wpf_A Trypanothione reductase 98.3 2.5E-07 8.7E-12 93.3 2.9 44 25-68 4-56 (495)
179 3ic9_A Dihydrolipoamide dehydr 98.3 2.8E-07 9.6E-12 93.0 3.1 39 28-67 8-46 (492)
180 3hyw_A Sulfide-quinone reducta 98.3 5E-07 1.7E-11 89.5 4.8 33 29-61 3-37 (430)
181 3dgz_A Thioredoxin reductase 2 98.3 4.3E-07 1.5E-11 91.6 4.4 43 26-68 4-54 (488)
182 3ihm_A Styrene monooxygenase A 98.3 4.9E-07 1.7E-11 89.6 4.5 35 27-61 21-55 (430)
183 2hqm_A GR, grase, glutathione 98.3 4.4E-07 1.5E-11 91.3 4.2 41 27-68 10-50 (479)
184 3vrd_B FCCB subunit, flavocyto 98.2 1.2E-06 4E-11 86.1 6.7 47 423-469 283-330 (401)
185 1fec_A Trypanothione reductase 98.2 5.2E-07 1.8E-11 90.9 4.1 49 231-279 237-287 (490)
186 1ges_A Glutathione reductase; 98.2 9.1E-06 3.1E-10 80.9 12.8 43 237-279 221-264 (450)
187 3pl8_A Pyranose 2-oxidase; sub 98.2 8.3E-07 2.8E-11 91.8 5.0 43 25-67 43-85 (623)
188 3dgh_A TRXR-1, thioredoxin red 98.2 8.8E-07 3E-11 89.2 4.9 43 26-68 7-58 (483)
189 1lvl_A Dihydrolipoamide dehydr 98.2 5.9E-07 2E-11 89.8 3.6 41 27-68 4-44 (458)
190 1o94_A Tmadh, trimethylamine d 98.2 1E-06 3.5E-11 93.2 5.3 44 26-69 387-430 (729)
191 3c4a_A Probable tryptophan hyd 98.2 1.1E-06 3.6E-11 85.7 5.0 35 29-63 1-37 (381)
192 2eq6_A Pyruvate dehydrogenase 98.2 9.1E-06 3.1E-10 81.3 11.9 36 28-63 169-204 (464)
193 1xdi_A RV3303C-LPDA; reductase 98.2 6E-07 2E-11 90.8 3.2 49 231-279 229-278 (499)
194 2r9z_A Glutathione amide reduc 98.2 1.2E-05 4.1E-10 80.4 12.5 43 237-279 220-263 (463)
195 3ef6_A Toluene 1,2-dioxygenase 98.2 1.1E-05 3.6E-10 79.4 11.9 43 237-279 198-240 (410)
196 1onf_A GR, grase, glutathione 98.2 1E-06 3.6E-11 89.0 4.8 40 28-68 2-41 (500)
197 3g5s_A Methylenetetrahydrofola 98.2 1.8E-06 6E-11 82.0 5.7 39 28-66 1-39 (443)
198 2eq6_A Pyruvate dehydrogenase 98.2 1.1E-06 3.8E-11 88.0 4.6 39 28-67 6-44 (464)
199 4eqs_A Coenzyme A disulfide re 98.1 6.9E-06 2.4E-10 81.4 10.0 35 29-63 1-37 (437)
200 1q1r_A Putidaredoxin reductase 98.1 2.6E-05 8.9E-10 77.1 12.9 43 237-279 204-249 (431)
201 1ebd_A E3BD, dihydrolipoamide 98.1 1.5E-05 5.1E-10 79.6 11.1 37 27-63 169-205 (455)
202 1nhp_A NADH peroxidase; oxidor 98.1 1.8E-05 6E-10 78.8 11.6 37 27-63 148-184 (447)
203 2hqm_A GR, grase, glutathione 98.1 2.3E-05 7.9E-10 78.7 12.2 42 237-278 239-283 (479)
204 1xdi_A RV3303C-LPDA; reductase 98.1 2.6E-05 8.8E-10 78.8 12.6 37 27-63 181-217 (499)
205 1ps9_A 2,4-dienoyl-COA reducta 98.1 2.9E-06 9.8E-11 89.0 5.8 43 26-68 371-413 (671)
206 4b1b_A TRXR, thioredoxin reduc 98.0 2.3E-06 8E-11 86.7 4.4 46 232-277 270-316 (542)
207 2gqw_A Ferredoxin reductase; f 98.0 3.4E-05 1.2E-09 75.7 12.5 38 26-63 143-180 (408)
208 1v59_A Dihydrolipoamide dehydr 98.0 2E-05 6.9E-10 79.1 11.1 36 28-63 183-218 (478)
209 3ic9_A Dihydrolipoamide dehydr 98.0 3.2E-05 1.1E-09 77.8 12.3 37 27-63 173-209 (492)
210 2gag_A Heterotetrameric sarcos 98.0 2.7E-06 9.1E-11 92.6 4.5 42 27-68 127-168 (965)
211 3oc4_A Oxidoreductase, pyridin 98.0 3.4E-05 1.2E-09 76.8 12.2 42 237-279 202-243 (452)
212 1gte_A Dihydropyrimidine dehyd 98.0 3.9E-06 1.3E-10 92.0 5.5 41 28-68 187-228 (1025)
213 3iwa_A FAD-dependent pyridine 98.0 3.2E-05 1.1E-09 77.5 11.7 43 237-279 215-257 (472)
214 1onf_A GR, grase, glutathione 98.0 3.8E-05 1.3E-09 77.5 12.3 43 237-279 230-274 (500)
215 1ojt_A Surface protein; redox- 98.0 2E-05 6.9E-10 79.2 10.2 43 237-279 239-285 (482)
216 1mo9_A ORF3; nucleotide bindin 98.0 3.1E-05 1E-09 78.6 11.5 42 237-278 268-314 (523)
217 1zmd_A Dihydrolipoyl dehydroge 98.0 3.6E-05 1.2E-09 77.2 11.8 36 28-63 178-213 (474)
218 1lqt_A FPRA; NADP+ derivative, 98.0 2.8E-06 9.7E-11 84.5 3.5 41 28-68 3-50 (456)
219 2a8x_A Dihydrolipoyl dehydroge 98.0 4.5E-05 1.5E-09 76.3 12.1 37 27-63 170-206 (464)
220 2x8g_A Thioredoxin glutathione 98.0 4.2E-06 1.4E-10 86.6 4.7 34 26-59 105-138 (598)
221 2wpf_A Trypanothione reductase 98.0 4.6E-05 1.6E-09 76.8 12.0 42 237-278 248-290 (495)
222 1fec_A Trypanothione reductase 98.0 4.1E-05 1.4E-09 77.1 11.6 37 27-63 186-225 (490)
223 2cdu_A NADPH oxidase; flavoenz 98.0 4.7E-05 1.6E-09 75.8 12.0 36 27-62 148-183 (452)
224 1lvl_A Dihydrolipoamide dehydr 98.0 2.1E-05 7E-10 78.5 9.3 37 27-63 170-206 (458)
225 1cjc_A Protein (adrenodoxin re 97.9 5.5E-06 1.9E-10 82.5 4.5 42 27-68 5-48 (460)
226 2qae_A Lipoamide, dihydrolipoy 97.9 5.6E-05 1.9E-09 75.6 11.8 37 27-63 173-209 (468)
227 3ntd_A FAD-dependent pyridine 97.9 7.9E-05 2.7E-09 76.5 12.8 36 27-62 150-185 (565)
228 2bc0_A NADH oxidase; flavoprot 97.9 7.4E-05 2.5E-09 75.2 12.1 38 26-63 192-229 (490)
229 2v3a_A Rubredoxin reductase; a 97.9 9.3E-06 3.2E-10 79.1 5.1 36 26-61 2-39 (384)
230 1m6i_A Programmed cell death p 97.9 7.5E-06 2.6E-10 82.5 4.2 49 231-279 232-281 (493)
231 1dxl_A Dihydrolipoamide dehydr 97.9 4.7E-05 1.6E-09 76.2 10.1 37 27-63 176-212 (470)
232 1m6i_A Programmed cell death p 97.8 9.4E-05 3.2E-09 74.4 11.3 35 28-62 180-218 (493)
233 3t37_A Probable dehydrogenase; 97.8 1E-05 3.6E-10 82.3 4.3 36 26-61 15-51 (526)
234 3lad_A Dihydrolipoamide dehydr 97.8 0.00012 4.3E-09 73.3 12.1 43 237-279 234-279 (476)
235 2gqw_A Ferredoxin reductase; f 97.8 1.6E-05 5.3E-10 78.1 5.2 38 27-64 6-45 (408)
236 1kdg_A CDH, cellobiose dehydro 97.8 1.5E-05 5.2E-10 81.4 5.2 37 27-63 6-42 (546)
237 1zk7_A HGII, reductase, mercur 97.8 0.00013 4.6E-09 72.8 11.9 42 237-279 229-270 (467)
238 3urh_A Dihydrolipoyl dehydroge 97.8 9.5E-05 3.2E-09 74.5 10.7 37 27-63 197-233 (491)
239 3cgb_A Pyridine nucleotide-dis 97.8 8.7E-05 3E-09 74.4 10.3 36 27-62 185-220 (480)
240 4dna_A Probable glutathione re 97.8 0.00014 4.7E-09 72.6 11.7 41 237-278 224-266 (463)
241 4b1b_A TRXR, thioredoxin reduc 97.7 0.00017 5.7E-09 73.0 11.9 34 27-60 222-255 (542)
242 1ju2_A HydroxynitrIle lyase; f 97.7 8.6E-06 3E-10 82.8 2.4 39 25-64 23-61 (536)
243 3ics_A Coenzyme A-disulfide re 97.7 0.00018 6.1E-09 74.2 11.4 36 27-62 186-221 (588)
244 1xhc_A NADH oxidase /nitrite r 97.7 2.6E-05 8.9E-10 75.3 4.5 36 27-63 7-42 (367)
245 3kd9_A Coenzyme A disulfide re 97.6 0.00023 7.8E-09 70.8 11.1 36 27-62 147-182 (449)
246 3dk9_A Grase, GR, glutathione 97.6 0.00028 9.5E-09 70.7 11.8 35 28-62 187-221 (478)
247 1n4w_A CHOD, cholesterol oxida 97.6 3.3E-05 1.1E-09 78.0 5.0 38 27-64 4-41 (504)
248 3q9t_A Choline dehydrogenase a 97.6 2.6E-05 9E-10 79.6 4.1 37 26-62 4-41 (577)
249 3l8k_A Dihydrolipoyl dehydroge 97.6 0.00029 9.9E-09 70.4 11.3 36 27-62 171-206 (466)
250 1xhc_A NADH oxidase /nitrite r 97.6 0.00018 6.2E-09 69.4 9.2 35 29-63 144-178 (367)
251 3qvp_A Glucose oxidase; oxidor 97.5 4.2E-05 1.4E-09 78.1 4.1 36 26-61 17-53 (583)
252 1coy_A Cholesterol oxidase; ox 97.5 5.9E-05 2E-09 76.2 4.8 38 25-62 8-45 (507)
253 1trb_A Thioredoxin reductase; 97.5 0.0006 2E-08 64.2 11.5 35 27-61 144-178 (320)
254 3dgh_A TRXR-1, thioredoxin red 97.5 0.00068 2.3E-08 68.0 12.5 33 27-59 186-218 (483)
255 4eqs_A Coenzyme A disulfide re 97.5 0.00042 1.4E-08 68.5 10.7 37 27-63 146-182 (437)
256 3s5w_A L-ornithine 5-monooxyge 97.5 0.00014 4.9E-09 72.5 6.8 43 237-279 329-376 (463)
257 4g6h_A Rotenone-insensitive NA 97.5 6.9E-05 2.3E-09 75.5 4.4 37 26-62 40-76 (502)
258 2q0l_A TRXR, thioredoxin reduc 97.4 0.00083 2.9E-08 62.9 11.2 35 27-61 142-176 (311)
259 3fim_B ARYL-alcohol oxidase; A 97.4 5.5E-05 1.9E-09 77.0 3.0 36 28-63 2-38 (566)
260 2jbv_A Choline oxidase; alcoho 97.4 9.7E-05 3.3E-09 75.2 4.9 37 27-63 12-49 (546)
261 3itj_A Thioredoxin reductase 1 97.4 0.00063 2.1E-08 64.5 10.1 35 27-61 172-206 (338)
262 3dgz_A Thioredoxin reductase 2 97.4 0.001 3.6E-08 66.7 12.2 34 27-60 184-217 (488)
263 1gpe_A Protein (glucose oxidas 97.4 0.00011 3.7E-09 75.5 4.8 37 27-63 23-60 (587)
264 2zbw_A Thioredoxin reductase; 97.3 0.0011 3.8E-08 62.8 11.2 35 27-61 151-185 (335)
265 1fl2_A Alkyl hydroperoxide red 97.3 0.0011 3.8E-08 62.0 10.7 35 27-61 143-177 (310)
266 2q7v_A Thioredoxin reductase; 97.3 0.0013 4.5E-08 62.0 11.3 35 27-61 151-185 (325)
267 3d1c_A Flavin-containing putat 97.3 0.00089 3E-08 64.4 10.3 36 27-62 165-200 (369)
268 3gwf_A Cyclohexanone monooxyge 97.3 0.0018 6.3E-08 65.6 12.1 36 27-62 177-212 (540)
269 3cty_A Thioredoxin reductase; 97.2 0.0015 5.3E-08 61.3 10.9 35 27-61 154-188 (319)
270 3f8d_A Thioredoxin reductase ( 97.2 0.0017 5.8E-08 61.0 10.5 36 26-61 152-187 (323)
271 3lzw_A Ferredoxin--NADP reduct 97.2 0.0014 4.7E-08 61.9 9.6 34 28-61 154-187 (332)
272 3uox_A Otemo; baeyer-villiger 97.2 0.0023 7.7E-08 65.0 11.5 36 27-62 184-219 (545)
273 3ab1_A Ferredoxin--NADP reduct 97.1 0.0012 4E-08 63.4 8.6 35 27-61 162-196 (360)
274 1vdc_A NTR, NADPH dependent th 97.1 0.0032 1.1E-07 59.5 11.1 35 27-61 158-192 (333)
275 4g6h_A Rotenone-insensitive NA 97.0 0.0015 5E-08 65.8 8.7 42 237-278 285-330 (502)
276 3qfa_A Thioredoxin reductase 1 97.0 0.0044 1.5E-07 62.6 12.0 32 28-59 210-241 (519)
277 2x8g_A Thioredoxin glutathione 97.0 0.0059 2E-07 62.9 12.9 34 27-60 285-318 (598)
278 3r9u_A Thioredoxin reductase; 97.0 0.002 7E-08 60.2 8.6 35 27-61 146-180 (315)
279 3k30_A Histamine dehydrogenase 96.9 0.0019 6.6E-08 67.7 8.9 39 25-63 520-560 (690)
280 2a87_A TRXR, TR, thioredoxin r 96.9 0.0029 1E-07 59.9 9.4 35 27-61 154-188 (335)
281 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.0037 1.3E-07 63.2 10.1 35 27-61 354-388 (521)
282 3fbs_A Oxidoreductase; structu 96.7 0.0055 1.9E-07 56.7 9.0 39 425-465 256-294 (297)
283 3klj_A NAD(FAD)-dependent dehy 96.3 0.003 1E-07 61.1 4.5 37 28-64 146-182 (385)
284 4gcm_A TRXR, thioredoxin reduc 96.2 0.0037 1.3E-07 58.5 4.9 36 27-62 144-179 (312)
285 1o94_A Tmadh, trimethylamine d 96.2 0.0098 3.4E-07 62.7 8.2 37 25-61 525-563 (729)
286 1lss_A TRK system potassium up 96.0 0.0067 2.3E-07 49.0 5.0 34 28-61 4-37 (140)
287 3fwz_A Inner membrane protein 96.0 0.0089 3.1E-07 48.5 5.5 35 27-61 6-40 (140)
288 2gag_A Heterotetrameric sarcos 96.0 0.025 8.5E-07 61.5 10.3 35 27-61 283-317 (965)
289 2g1u_A Hypothetical protein TM 96.0 0.0084 2.9E-07 49.6 5.2 35 27-61 18-52 (155)
290 3llv_A Exopolyphosphatase-rela 95.9 0.0093 3.2E-07 48.4 5.3 35 27-61 5-39 (141)
291 2x5o_A UDP-N-acetylmuramoylala 95.9 0.0078 2.7E-07 59.3 5.7 36 28-63 5-40 (439)
292 3ic5_A Putative saccharopine d 95.9 0.0073 2.5E-07 47.1 4.4 35 27-61 4-39 (118)
293 4a5l_A Thioredoxin reductase; 95.7 0.0084 2.9E-07 56.0 4.8 35 27-61 151-185 (314)
294 3lk7_A UDP-N-acetylmuramoylala 95.6 0.009 3.1E-07 59.1 4.7 35 27-61 8-42 (451)
295 1ps9_A 2,4-dienoyl-COA reducta 95.4 0.054 1.8E-06 56.5 10.1 40 237-279 586-627 (671)
296 2hmt_A YUAA protein; RCK, KTN, 95.3 0.018 6E-07 46.7 4.9 33 28-60 6-38 (144)
297 1id1_A Putative potassium chan 95.2 0.027 9.3E-07 46.3 5.8 33 28-60 3-35 (153)
298 4e12_A Diketoreductase; oxidor 95.2 0.021 7.1E-07 52.6 5.3 34 27-60 3-36 (283)
299 3ado_A Lambda-crystallin; L-gu 95.1 0.02 6.9E-07 53.2 4.9 34 28-61 6-39 (319)
300 1f0y_A HCDH, L-3-hydroxyacyl-C 95.1 0.023 7.7E-07 52.9 5.3 33 28-60 15-47 (302)
301 3c85_A Putative glutathione-re 94.8 0.028 9.5E-07 47.8 4.7 34 28-61 39-73 (183)
302 3g79_A NDP-N-acetyl-D-galactos 94.7 0.027 9.1E-07 55.7 5.0 37 26-62 16-54 (478)
303 3eag_A UDP-N-acetylmuramate:L- 94.7 0.032 1.1E-06 52.5 5.2 35 27-61 3-38 (326)
304 3k96_A Glycerol-3-phosphate de 94.6 0.031 1.1E-06 53.2 5.0 33 28-60 29-61 (356)
305 2xve_A Flavin-containing monoo 94.6 0.031 1.1E-06 55.5 5.1 36 27-62 196-231 (464)
306 2dpo_A L-gulonate 3-dehydrogen 94.6 0.033 1.1E-06 52.1 4.9 34 27-60 5-38 (319)
307 3lxd_A FAD-dependent pyridine 94.5 0.038 1.3E-06 53.9 5.6 37 28-64 152-188 (415)
308 1kyq_A Met8P, siroheme biosynt 94.5 0.031 1.1E-06 50.7 4.4 35 27-61 12-46 (274)
309 1t2d_A LDH-P, L-lactate dehydr 94.5 0.042 1.4E-06 51.5 5.4 36 26-61 2-38 (322)
310 4dio_A NAD(P) transhydrogenase 94.4 0.04 1.4E-06 52.8 5.2 35 27-61 189-223 (405)
311 3i83_A 2-dehydropantoate 2-red 94.4 0.037 1.3E-06 51.9 4.9 33 29-61 3-35 (320)
312 2ewd_A Lactate dehydrogenase,; 94.4 0.035 1.2E-06 52.0 4.7 36 26-61 2-38 (317)
313 3dfz_A SIRC, precorrin-2 dehyd 94.3 0.044 1.5E-06 48.0 4.9 34 27-60 30-63 (223)
314 3fg2_P Putative rubredoxin red 94.3 0.039 1.3E-06 53.6 5.0 38 27-64 141-178 (404)
315 2raf_A Putative dinucleotide-b 94.3 0.046 1.6E-06 47.7 4.9 37 26-62 17-53 (209)
316 1zej_A HBD-9, 3-hydroxyacyl-CO 94.2 0.04 1.4E-06 50.7 4.7 36 25-61 9-44 (293)
317 3l4b_C TRKA K+ channel protien 94.2 0.04 1.4E-06 48.4 4.6 32 30-61 2-33 (218)
318 3doj_A AT3G25530, dehydrogenas 94.1 0.047 1.6E-06 50.9 5.1 37 25-61 18-54 (310)
319 4ap3_A Steroid monooxygenase; 94.1 0.033 1.1E-06 56.5 4.3 36 27-62 190-225 (549)
320 3hn2_A 2-dehydropantoate 2-red 94.1 0.037 1.3E-06 51.7 4.3 33 29-61 3-35 (312)
321 3sx6_A Sulfide-quinone reducta 94.1 0.11 3.9E-06 50.9 8.0 38 238-277 222-266 (437)
322 2gv8_A Monooxygenase; FMO, FAD 94.1 0.046 1.6E-06 53.9 5.2 37 27-63 211-248 (447)
323 2y0c_A BCEC, UDP-glucose dehyd 94.1 0.044 1.5E-06 54.4 4.9 34 27-60 7-40 (478)
324 3k6j_A Protein F01G10.3, confi 94.0 0.055 1.9E-06 53.0 5.3 36 27-62 53-88 (460)
325 2ew2_A 2-dehydropantoate 2-red 94.0 0.047 1.6E-06 50.9 4.7 33 28-60 3-35 (316)
326 3p2y_A Alanine dehydrogenase/p 94.0 0.04 1.4E-06 52.3 4.2 34 27-60 183-216 (381)
327 3vtf_A UDP-glucose 6-dehydroge 93.8 0.047 1.6E-06 53.1 4.5 36 26-61 19-54 (444)
328 1ks9_A KPA reductase;, 2-dehyd 93.8 0.06 2E-06 49.5 5.1 32 30-61 2-33 (291)
329 3ghy_A Ketopantoate reductase 93.8 0.061 2.1E-06 50.8 5.2 33 28-60 3-35 (335)
330 1pzg_A LDH, lactate dehydrogen 93.8 0.053 1.8E-06 51.0 4.7 35 27-61 8-43 (331)
331 3qha_A Putative oxidoreductase 93.8 0.047 1.6E-06 50.5 4.3 38 25-62 12-49 (296)
332 1bg6_A N-(1-D-carboxylethyl)-L 93.7 0.056 1.9E-06 51.5 4.9 33 28-60 4-36 (359)
333 1lld_A L-lactate dehydrogenase 93.7 0.059 2E-06 50.4 4.9 34 28-61 7-42 (319)
334 3gg2_A Sugar dehydrogenase, UD 93.7 0.058 2E-06 53.1 4.9 33 29-61 3-35 (450)
335 2hjr_A Malate dehydrogenase; m 93.6 0.072 2.5E-06 50.0 5.3 34 28-61 14-48 (328)
336 2vdc_G Glutamate synthase [NAD 93.6 0.075 2.6E-06 52.5 5.6 36 27-62 263-299 (456)
337 3g17_A Similar to 2-dehydropan 93.5 0.054 1.8E-06 50.1 4.2 33 29-61 3-35 (294)
338 1zcj_A Peroxisomal bifunctiona 93.5 0.072 2.5E-06 52.7 5.2 35 27-61 36-70 (463)
339 1evy_A Glycerol-3-phosphate de 93.4 0.035 1.2E-06 53.2 2.7 31 30-60 17-47 (366)
340 3hwr_A 2-dehydropantoate 2-red 93.3 0.076 2.6E-06 49.7 4.8 33 27-60 18-50 (318)
341 3dtt_A NADP oxidoreductase; st 93.2 0.09 3.1E-06 47.1 5.1 35 26-60 17-51 (245)
342 4a7p_A UDP-glucose dehydrogena 93.2 0.083 2.8E-06 51.8 5.1 36 27-62 7-42 (446)
343 2q3e_A UDP-glucose 6-dehydroge 93.1 0.057 1.9E-06 53.5 3.9 36 25-60 2-39 (467)
344 3oj0_A Glutr, glutamyl-tRNA re 93.1 0.047 1.6E-06 44.3 2.8 33 28-60 21-53 (144)
345 4ffl_A PYLC; amino acid, biosy 93.1 0.094 3.2E-06 50.0 5.2 35 28-62 1-35 (363)
346 3mog_A Probable 3-hydroxybutyr 93.0 0.093 3.2E-06 52.0 5.2 34 28-61 5-38 (483)
347 2vns_A Metalloreductase steap3 93.0 0.11 3.8E-06 45.4 5.2 34 27-60 27-60 (215)
348 2a9f_A Putative malic enzyme ( 93.0 0.078 2.7E-06 50.3 4.4 34 27-60 187-221 (398)
349 2v6b_A L-LDH, L-lactate dehydr 93.0 0.09 3.1E-06 48.8 4.8 32 30-61 2-35 (304)
350 3pid_A UDP-glucose 6-dehydroge 93.0 0.085 2.9E-06 51.3 4.7 34 27-61 35-68 (432)
351 3g0o_A 3-hydroxyisobutyrate de 93.0 0.093 3.2E-06 48.7 4.9 35 27-61 6-40 (303)
352 2h78_A Hibadh, 3-hydroxyisobut 92.9 0.076 2.6E-06 49.2 4.3 34 27-60 2-35 (302)
353 1vl6_A Malate oxidoreductase; 92.8 0.086 3E-06 49.9 4.4 34 27-60 191-225 (388)
354 3tl2_A Malate dehydrogenase; c 92.8 0.11 3.9E-06 48.2 5.2 34 27-60 7-41 (315)
355 4e21_A 6-phosphogluconate dehy 92.8 0.1 3.4E-06 49.6 4.9 37 25-61 19-55 (358)
356 1x13_A NAD(P) transhydrogenase 92.7 0.1 3.5E-06 50.5 4.9 34 27-60 171-204 (401)
357 3c4a_A Probable tryptophan hyd 92.7 0.44 1.5E-05 45.6 9.4 35 426-460 261-298 (381)
358 2uyy_A N-PAC protein; long-cha 92.7 0.12 4E-06 48.3 5.2 35 27-61 29-63 (316)
359 1z82_A Glycerol-3-phosphate de 92.7 0.11 3.6E-06 49.1 4.9 36 25-60 11-46 (335)
360 3pef_A 6-phosphogluconate dehy 92.6 0.11 3.6E-06 47.9 4.7 33 29-61 2-34 (287)
361 1pjc_A Protein (L-alanine dehy 92.6 0.12 4.2E-06 49.2 5.3 33 28-60 167-199 (361)
362 3pdu_A 3-hydroxyisobutyrate de 92.6 0.074 2.5E-06 48.9 3.6 33 29-61 2-34 (287)
363 2qyt_A 2-dehydropantoate 2-red 92.6 0.072 2.5E-06 49.7 3.6 31 29-59 9-45 (317)
364 1l7d_A Nicotinamide nucleotide 92.5 0.12 4.1E-06 49.7 5.1 35 27-61 171-205 (384)
365 4dll_A 2-hydroxy-3-oxopropiona 92.5 0.099 3.4E-06 48.9 4.5 36 26-61 29-64 (320)
366 3o0h_A Glutathione reductase; 92.5 0.11 3.9E-06 51.6 5.2 37 27-63 190-226 (484)
367 3ego_A Probable 2-dehydropanto 92.5 0.11 3.8E-06 48.2 4.7 31 29-60 3-33 (307)
368 1mv8_A GMD, GDP-mannose 6-dehy 92.4 0.087 3E-06 51.7 4.1 31 30-60 2-32 (436)
369 3gvi_A Malate dehydrogenase; N 92.4 0.14 4.6E-06 47.9 5.2 34 28-61 7-41 (324)
370 1nyt_A Shikimate 5-dehydrogena 92.4 0.13 4.5E-06 46.7 5.0 34 27-60 118-151 (271)
371 1ur5_A Malate dehydrogenase; o 92.4 0.13 4.5E-06 47.8 5.0 33 29-61 3-36 (309)
372 3l6d_A Putative oxidoreductase 92.3 0.16 5.3E-06 47.2 5.5 35 27-61 8-42 (306)
373 3phh_A Shikimate dehydrogenase 92.3 0.16 5.3E-06 46.0 5.2 34 28-61 118-151 (269)
374 1y6j_A L-lactate dehydrogenase 92.1 0.14 4.9E-06 47.7 5.0 35 27-61 6-42 (318)
375 1guz_A Malate dehydrogenase; o 92.1 0.14 4.8E-06 47.6 4.9 32 30-61 2-35 (310)
376 3cky_A 2-hydroxymethyl glutara 92.0 0.12 4E-06 47.8 4.3 34 27-60 3-36 (301)
377 4huj_A Uncharacterized protein 92.0 0.08 2.7E-06 46.5 2.9 34 27-60 22-56 (220)
378 2i6t_A Ubiquitin-conjugating e 91.9 0.13 4.3E-06 47.7 4.2 36 26-61 12-49 (303)
379 2qrj_A Saccharopine dehydrogen 91.9 0.12 4.2E-06 49.1 4.2 41 26-66 212-257 (394)
380 2wtb_A MFP2, fatty acid multif 91.8 0.16 5.5E-06 53.1 5.4 35 27-61 311-345 (725)
381 1dlj_A UDP-glucose dehydrogena 91.7 0.12 4.2E-06 50.0 4.2 31 30-61 2-32 (402)
382 3qsg_A NAD-binding phosphogluc 91.7 0.12 4.2E-06 48.1 4.0 34 27-60 23-57 (312)
383 2pv7_A T-protein [includes: ch 91.7 0.18 6.1E-06 46.6 5.1 34 28-61 21-55 (298)
384 1p77_A Shikimate 5-dehydrogena 91.7 0.13 4.6E-06 46.8 4.2 34 27-60 118-151 (272)
385 3l9w_A Glutathione-regulated p 91.7 0.19 6.4E-06 48.8 5.3 35 27-61 3-37 (413)
386 3pqe_A L-LDH, L-lactate dehydr 91.6 0.15 5.2E-06 47.6 4.5 34 27-60 4-39 (326)
387 1txg_A Glycerol-3-phosphate de 91.6 0.12 4.2E-06 48.5 4.0 30 30-59 2-31 (335)
388 3p7m_A Malate dehydrogenase; p 91.6 0.2 6.9E-06 46.7 5.3 34 28-61 5-39 (321)
389 1cjc_A Protein (adrenodoxin re 91.6 0.15 5.2E-06 50.3 4.7 35 27-61 144-199 (460)
390 2egg_A AROE, shikimate 5-dehyd 91.6 0.17 6E-06 46.6 4.9 34 27-60 140-174 (297)
391 1hyh_A L-hicdh, L-2-hydroxyiso 91.5 0.14 4.7E-06 47.7 4.2 33 29-61 2-36 (309)
392 2eez_A Alanine dehydrogenase; 91.5 0.19 6.5E-06 48.0 5.3 33 28-60 166-198 (369)
393 4ezb_A Uncharacterized conserv 91.5 0.17 5.7E-06 47.3 4.7 34 28-61 24-58 (317)
394 1jay_A Coenzyme F420H2:NADP+ o 91.5 0.19 6.5E-06 43.6 4.8 31 30-60 2-33 (212)
395 4g65_A TRK system potassium up 91.4 0.1 3.5E-06 51.5 3.2 65 28-103 3-67 (461)
396 1jw9_B Molybdopterin biosynthe 91.3 0.16 5.3E-06 45.6 4.1 33 28-60 31-64 (249)
397 1vpd_A Tartronate semialdehyde 91.1 0.16 5.4E-06 46.9 4.1 32 29-60 6-37 (299)
398 3ldh_A Lactate dehydrogenase; 91.1 0.18 6.3E-06 46.9 4.5 35 27-61 20-56 (330)
399 3dfu_A Uncharacterized protein 91.1 0.064 2.2E-06 47.3 1.2 35 26-60 4-38 (232)
400 2o3j_A UDP-glucose 6-dehydroge 91.0 0.13 4.5E-06 51.1 3.6 33 28-60 9-43 (481)
401 4gwg_A 6-phosphogluconate dehy 91.0 0.22 7.4E-06 49.3 5.1 35 27-61 3-37 (484)
402 1ez4_A Lactate dehydrogenase; 91.0 0.17 5.8E-06 47.2 4.2 36 25-60 2-39 (318)
403 1a5z_A L-lactate dehydrogenase 91.0 0.16 5.5E-06 47.4 4.1 31 30-60 2-34 (319)
404 1edz_A 5,10-methylenetetrahydr 90.9 0.18 6.2E-06 46.6 4.2 35 26-60 175-210 (320)
405 2vhw_A Alanine dehydrogenase; 90.9 0.24 8.3E-06 47.4 5.3 34 27-60 167-200 (377)
406 2g5c_A Prephenate dehydrogenas 90.8 0.23 8E-06 45.3 4.9 32 29-60 2-35 (281)
407 1pjq_A CYSG, siroheme synthase 90.8 0.21 7E-06 49.3 4.7 34 27-60 11-44 (457)
408 3c24_A Putative oxidoreductase 90.8 0.27 9.3E-06 45.0 5.3 33 28-60 11-44 (286)
409 3dhn_A NAD-dependent epimerase 90.7 0.19 6.5E-06 44.1 4.1 36 26-61 2-38 (227)
410 3don_A Shikimate dehydrogenase 90.7 0.18 6.3E-06 45.8 4.0 35 27-61 116-151 (277)
411 3ius_A Uncharacterized conserv 90.7 0.21 7.1E-06 45.6 4.5 35 27-61 4-38 (286)
412 4a9w_A Monooxygenase; baeyer-v 90.7 0.2 7E-06 47.1 4.6 33 27-60 162-194 (357)
413 3ggo_A Prephenate dehydrogenas 90.7 0.26 8.9E-06 45.9 5.1 34 28-61 33-68 (314)
414 3u62_A Shikimate dehydrogenase 90.5 0.31 1.1E-05 43.7 5.2 34 27-61 108-142 (253)
415 2zyd_A 6-phosphogluconate dehy 90.5 0.22 7.7E-06 49.3 4.7 34 27-60 14-47 (480)
416 2izz_A Pyrroline-5-carboxylate 90.4 0.26 8.7E-06 46.1 4.9 35 27-61 21-59 (322)
417 2ahr_A Putative pyrroline carb 90.4 0.24 8E-06 44.6 4.5 33 28-60 3-35 (259)
418 3vku_A L-LDH, L-lactate dehydr 90.3 0.24 8.2E-06 46.2 4.5 35 26-60 7-43 (326)
419 3ktd_A Prephenate dehydrogenas 90.3 0.31 1.1E-05 45.8 5.3 35 27-61 7-41 (341)
420 1yj8_A Glycerol-3-phosphate de 90.3 0.18 6.1E-06 48.3 3.7 34 29-62 22-62 (375)
421 4aj2_A L-lactate dehydrogenase 90.3 0.3 1E-05 45.7 5.1 35 26-60 17-53 (331)
422 1oju_A MDH, malate dehydrogena 90.3 0.21 7.3E-06 45.9 4.0 32 30-61 2-35 (294)
423 2p4q_A 6-phosphogluconate dehy 90.3 0.29 1E-05 48.6 5.4 36 26-61 8-43 (497)
424 4gbj_A 6-phosphogluconate dehy 90.2 0.19 6.6E-06 46.3 3.8 33 29-61 6-38 (297)
425 2cvz_A Dehydrogenase, 3-hydrox 90.2 0.21 7.3E-06 45.7 4.1 32 29-61 2-33 (289)
426 1wdk_A Fatty oxidation complex 90.2 0.24 8.3E-06 51.7 4.9 35 27-61 313-347 (715)
427 3tnl_A Shikimate dehydrogenase 90.2 0.32 1.1E-05 45.1 5.2 35 26-60 152-187 (315)
428 2f1k_A Prephenate dehydrogenas 90.2 0.27 9.2E-06 44.8 4.7 31 30-60 2-32 (279)
429 2hk9_A Shikimate dehydrogenase 90.2 0.19 6.5E-06 45.8 3.6 34 27-60 128-161 (275)
430 4hv4_A UDP-N-acetylmuramate--L 90.2 0.18 6.1E-06 50.3 3.7 36 26-61 20-56 (494)
431 3pwz_A Shikimate dehydrogenase 90.0 0.32 1.1E-05 44.1 5.0 34 27-60 119-153 (272)
432 1ldn_A L-lactate dehydrogenase 90.0 0.26 9E-06 45.9 4.5 34 27-60 5-40 (316)
433 2rir_A Dipicolinate synthase, 90.0 0.33 1.1E-05 44.9 5.2 35 27-61 156-190 (300)
434 3c7a_A Octopine dehydrogenase; 90.0 0.17 5.7E-06 49.1 3.3 31 29-59 3-34 (404)
435 3gt0_A Pyrroline-5-carboxylate 90.0 0.35 1.2E-05 43.2 5.2 32 29-60 3-38 (247)
436 1yqg_A Pyrroline-5-carboxylate 89.9 0.24 8.1E-06 44.7 4.1 31 30-60 2-33 (263)
437 3fbt_A Chorismate mutase and s 89.9 0.28 9.6E-06 44.7 4.5 36 26-61 120-156 (282)
438 2aef_A Calcium-gated potassium 89.9 0.14 4.9E-06 45.3 2.6 35 26-61 7-41 (234)
439 3nep_X Malate dehydrogenase; h 89.9 0.25 8.5E-06 45.9 4.2 33 29-61 1-35 (314)
440 3gpi_A NAD-dependent epimerase 89.9 0.4 1.4E-05 43.7 5.6 34 28-61 3-36 (286)
441 3ojo_A CAP5O; rossmann fold, c 89.8 0.23 7.9E-06 48.3 4.1 35 27-61 10-44 (431)
442 3o8q_A Shikimate 5-dehydrogena 89.8 0.35 1.2E-05 44.1 5.1 34 27-60 125-159 (281)
443 3d4o_A Dipicolinate synthase s 89.8 0.36 1.2E-05 44.4 5.2 35 27-61 154-188 (293)
444 2gf2_A Hibadh, 3-hydroxyisobut 89.8 0.27 9.3E-06 45.2 4.5 32 30-61 2-33 (296)
445 3jyo_A Quinate/shikimate dehyd 89.6 0.36 1.2E-05 44.1 5.0 35 26-60 125-160 (283)
446 3e8x_A Putative NAD-dependent 89.6 0.35 1.2E-05 42.7 4.9 35 27-61 20-55 (236)
447 1n7h_A GDP-D-mannose-4,6-dehyd 89.6 0.35 1.2E-05 46.2 5.3 33 29-61 29-62 (381)
448 1yb4_A Tartronic semialdehyde 89.5 0.2 6.7E-06 46.1 3.3 33 28-61 3-35 (295)
449 1w4x_A Phenylacetone monooxyge 89.5 0.26 9E-06 49.8 4.4 35 27-61 185-219 (542)
450 2pgd_A 6-phosphogluconate dehy 89.5 0.32 1.1E-05 48.2 5.0 33 29-61 3-35 (482)
451 3fi9_A Malate dehydrogenase; s 89.4 0.37 1.3E-05 45.3 5.0 34 27-60 7-43 (343)
452 1nvt_A Shikimate 5'-dehydrogen 89.4 0.3 1E-05 44.8 4.3 33 27-60 127-159 (287)
453 3ond_A Adenosylhomocysteinase; 89.3 0.36 1.2E-05 47.3 5.0 35 26-60 263-297 (488)
454 2rcy_A Pyrroline carboxylate r 89.2 0.32 1.1E-05 43.8 4.3 35 28-62 4-42 (262)
455 3t4e_A Quinate/shikimate dehyd 89.1 0.44 1.5E-05 44.1 5.3 35 26-60 146-181 (312)
456 1x0v_A GPD-C, GPDH-C, glycerol 89.1 0.18 6.2E-06 47.8 2.8 34 29-62 9-49 (354)
457 3zwc_A Peroxisomal bifunctiona 89.1 0.36 1.2E-05 50.3 5.2 35 27-61 315-349 (742)
458 2d5c_A AROE, shikimate 5-dehyd 89.1 0.42 1.4E-05 43.1 5.1 33 27-60 116-148 (263)
459 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.9 0.36 1.2E-05 47.8 4.9 32 29-60 2-33 (478)
460 3tri_A Pyrroline-5-carboxylate 88.9 0.47 1.6E-05 43.3 5.3 34 28-61 3-39 (280)
461 1lqt_A FPRA; NADP+ derivative, 88.9 0.34 1.2E-05 47.8 4.6 36 27-62 146-202 (456)
462 1gte_A Dihydropyrimidine dehyd 88.8 0.32 1.1E-05 53.3 4.8 34 28-61 332-366 (1025)
463 3d0o_A L-LDH 1, L-lactate dehy 88.7 0.34 1.2E-05 45.1 4.3 34 27-60 5-40 (317)
464 1np3_A Ketol-acid reductoisome 88.6 0.47 1.6E-05 44.7 5.2 32 29-60 17-48 (338)
465 2dvm_A Malic enzyme, 439AA lon 88.6 0.5 1.7E-05 45.8 5.4 32 27-58 185-219 (439)
466 3d1l_A Putative NADP oxidoredu 88.6 0.32 1.1E-05 44.0 3.9 32 29-60 11-43 (266)
467 1npy_A Hypothetical shikimate 88.3 0.75 2.6E-05 41.6 6.1 34 27-60 118-152 (271)
468 1a4i_A Methylenetetrahydrofola 88.1 0.45 1.5E-05 43.3 4.5 35 26-60 163-198 (301)
469 3ngx_A Bifunctional protein fo 88.0 0.77 2.6E-05 41.3 5.8 34 26-59 148-182 (276)
470 3ew7_A LMO0794 protein; Q8Y8U8 88.0 0.56 1.9E-05 40.6 5.0 31 30-60 2-33 (221)
471 1hdo_A Biliverdin IX beta redu 87.7 0.64 2.2E-05 39.7 5.2 33 29-61 4-37 (206)
472 1y56_A Hypothetical protein PH 87.7 0.79 2.7E-05 45.6 6.5 53 227-279 259-312 (493)
473 2iz1_A 6-phosphogluconate dehy 87.7 0.5 1.7E-05 46.8 5.0 33 28-60 5-37 (474)
474 3r6d_A NAD-dependent epimerase 87.6 0.72 2.5E-05 40.1 5.5 34 28-61 5-40 (221)
475 3obb_A Probable 3-hydroxyisobu 87.6 0.45 1.5E-05 43.9 4.3 34 27-60 2-35 (300)
476 1leh_A Leucine dehydrogenase; 87.6 0.57 1.9E-05 44.4 5.0 35 26-60 171-205 (364)
477 1i36_A Conserved hypothetical 87.6 0.41 1.4E-05 43.1 4.0 30 30-59 2-31 (264)
478 4id9_A Short-chain dehydrogena 87.3 0.6 2.1E-05 43.9 5.2 37 26-62 17-54 (347)
479 3ce6_A Adenosylhomocysteinase; 87.3 0.94 3.2E-05 44.7 6.6 36 25-60 271-306 (494)
480 1lu9_A Methylene tetrahydromet 87.3 0.66 2.3E-05 42.4 5.2 34 27-60 118-152 (287)
481 2zqz_A L-LDH, L-lactate dehydr 87.3 0.5 1.7E-05 44.1 4.4 34 27-60 8-43 (326)
482 2f00_A UDP-N-acetylmuramate--L 87.3 0.41 1.4E-05 47.7 4.1 36 26-61 17-53 (491)
483 3h2s_A Putative NADH-flavin re 87.2 0.64 2.2E-05 40.4 4.9 31 30-60 2-33 (224)
484 4a26_A Putative C-1-tetrahydro 87.1 0.57 1.9E-05 42.7 4.5 35 26-60 163-198 (300)
485 2d4a_B Malate dehydrogenase; a 87.1 0.5 1.7E-05 43.8 4.2 32 30-61 1-33 (308)
486 1b0a_A Protein (fold bifunctio 87.1 0.57 2E-05 42.4 4.4 35 26-60 157-192 (288)
487 3h8v_A Ubiquitin-like modifier 87.0 0.44 1.5E-05 43.6 3.7 34 27-60 35-69 (292)
488 3gvp_A Adenosylhomocysteinase 86.9 0.65 2.2E-05 44.7 5.0 36 25-60 217-252 (435)
489 1gpj_A Glutamyl-tRNA reductase 86.8 0.5 1.7E-05 45.6 4.3 35 27-61 166-201 (404)
490 1mld_A Malate dehydrogenase; o 86.8 0.52 1.8E-05 43.8 4.2 32 30-61 2-36 (314)
491 3rui_A Ubiquitin-like modifier 86.7 0.68 2.3E-05 43.2 4.9 34 27-60 33-67 (340)
492 3b1f_A Putative prephenate deh 86.7 0.55 1.9E-05 43.0 4.3 33 28-60 6-40 (290)
493 1zud_1 Adenylyltransferase THI 86.6 0.58 2E-05 41.9 4.3 34 27-60 27-61 (251)
494 1qyc_A Phenylcoumaran benzylic 86.4 0.7 2.4E-05 42.5 5.0 35 27-61 3-38 (308)
495 1p3d_A UDP-N-acetylmuramate--a 86.4 0.42 1.4E-05 47.4 3.6 36 26-61 16-52 (475)
496 4fk1_A Putative thioredoxin re 86.2 0.79 2.7E-05 42.2 5.2 40 424-464 262-301 (304)
497 2dbq_A Glyoxylate reductase; D 86.0 0.85 2.9E-05 42.7 5.3 35 27-61 149-183 (334)
498 4b4o_A Epimerase family protei 86.0 0.91 3.1E-05 41.6 5.5 35 29-63 1-36 (298)
499 2yjz_A Metalloreductase steap4 86.0 0.15 5.1E-06 44.0 0.0 34 28-61 19-52 (201)
500 1smk_A Malate dehydrogenase, g 85.6 0.51 1.8E-05 44.1 3.6 35 27-61 7-44 (326)
No 1
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=100.00 E-value=3.1e-45 Score=375.83 Aligned_cols=419 Identities=21% Similarity=0.306 Sum_probs=304.2
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCC-CceeecccceeeCCCCCCchHHHHHHhCCce
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSF-GCPVDMGASWLHGVCNENPLAPLIRRLGLTL 104 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~-g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (493)
.+++||+|||||++||+||++|+++|++|+|+|+++++||+++|.... |+.+|.|++++++ .+..+.++++++|++.
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~--~~~~~~~l~~~lgl~~ 79 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGP--TQNRILRLAKELGLET 79 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCTTTSCEESSCCEECT--TCHHHHHHHHHTTCCE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccCCCcccccCceEecC--CcHHHHHHHHHcCCcc
Confidence 456899999999999999999999999999999999999999998885 9999999999985 3567899999999986
Q ss_pred eeeCCCCccc-ccCCccceeeecCCCcc-ccHHHHHHHHHHHHHHHHHHHHhhhcC-------------CCCCCHHHHHH
Q 039105 105 YRTSGDNSVL-YDHDLESYALYDMDGNK-VEKEMAIKVGEIFKRILNETQKVRDEH-------------TNDMSVLQAIS 169 (493)
Q Consensus 105 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~s~~~~~~ 169 (493)
.........+ +..+ .. ..+...... ........ +.++.....++.... .++.++.+++.
T Consensus 80 ~~~~~~~~~~~~~~g-~~-~~~~~~~p~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 153 (520)
T 1s3e_A 80 YKVNEVERLIHHVKG-KS-YPFRGPFPPVWNPITYLD----HNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLD 153 (520)
T ss_dssp EECCCSSEEEEEETT-EE-EEECSSSCCCCSHHHHHH----HHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHH
T ss_pred eecccCCceEEEECC-EE-EEecCCCCCCCCHHHHHH----HHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHH
Confidence 5533222111 1111 11 111111000 11111111 112222222221110 13456666665
Q ss_pred HHHhcChhhhhhchHHHHHHHHHHH-HHhhhcCCcccccccccccccc------------ccCCccccccChHHHHHHHh
Q 039105 170 IVLDRHPELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQEQV------------LSGGHGLMVQGYDPVIKALS 236 (493)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~------------~~~g~~~~~~G~~~l~~~L~ 236 (493)
+. .. .+.++.++.+ ....++.++.++|+..+..... ..+...++.+|++.++++|.
T Consensus 154 ~~----------~~-~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~ 222 (520)
T 1s3e_A 154 KL----------CW-TESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIM 222 (520)
T ss_dssp HH----------CS-SHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHH
T ss_pred hh----------CC-CHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHH
Confidence 43 12 2233444444 3457778888887765431111 01224678999999999998
Q ss_pred h--cCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEE
Q 039105 237 K--DIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALR 314 (493)
Q Consensus 237 ~--gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~ 314 (493)
+ |++|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.+ +.+.|++|+...+.+..+.++...++++.
T Consensus 223 ~~lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~ 300 (520)
T 1s3e_A 223 DLLGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK--IHFNPPLPMMRNQMITRVPLGSVIKCIVY 300 (520)
T ss_dssp HHHGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG--SEEESCCCHHHHHHTTSCCBCCEEEEEEE
T ss_pred HHcCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc--eeeCCCCCHHHHHHHHhCCCcceEEEEEE
Confidence 7 8899999999999988888999999999999999999999999764 34678999998899999999999999999
Q ss_pred cCCCCCCCCCcceeec--CC-CCceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCC--CCC
Q 039105 315 FDNVFWPNVELLGVVA--PT-SYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDA--TEP 389 (493)
Q Consensus 315 ~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~--~~~ 389 (493)
|+.++|++..+.+... .. ......++....+++..+++.++.+.....+.+++++++++.++++|++++|.. .+|
T Consensus 301 ~~~~~w~~~~~~g~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~~L~~~~~~~~~~~p 380 (520)
T 1s3e_A 301 YKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARKLARLTKEERLKKLCELYAKVLGSLEALEP 380 (520)
T ss_dssp CSSCGGGGGTEEEEEEECSTTCSCSEEEECCCTTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHHHHHHHHTCGGGGCC
T ss_pred eCCCcccCCCCCceeeccCCCCceEEEeeCCCCCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHHHHHHHhCccccCCc
Confidence 9999997665555432 22 222223333333444578888887776778888999999999999999999853 578
Q ss_pred cEEEEcccCCCCCCCcccc-CCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHhC
Q 039105 390 VQYLVSRWGTDPNTLGCYS-YDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQ 465 (493)
Q Consensus 390 ~~~~~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~~ 465 (493)
.++..++|..++|..|+|. ...|++.....+.+.+|++||||||++++..++|+++||+.||++||++|++.+.+.
T Consensus 381 ~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~~~ 457 (520)
T 1s3e_A 381 VHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKI 457 (520)
T ss_dssp SEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTTSS
T ss_pred cEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHhcC
Confidence 8888999999999999986 555666545556788999999999999987778899999999999999999987653
No 2
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=100.00 E-value=1.3e-43 Score=357.95 Aligned_cols=419 Identities=21% Similarity=0.273 Sum_probs=295.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLYR 106 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~ 106 (493)
.++||+|||||++||+||++|+++|++|+|+|+++++||++++....|+.+|.|+++++. ....+.++++++|++...
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~~g~~~~~ 81 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSP--DQTALISLLDELGLKTFE 81 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEETTEEEECSCCCBCT--TCHHHHHHHHHTTCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccCCceeccCCeEecC--ccHHHHHHHHHcCCcccc
Confidence 357999999999999999999999999999999999999999988789999999999874 355788999999998654
Q ss_pred eCCCCccc-ccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhc---------CCCCCCHHHHHHHHHhcCh
Q 039105 107 TSGDNSVL-YDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDE---------HTNDMSVLQAISIVLDRHP 176 (493)
Q Consensus 107 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~s~~~~~~~~~~~~~ 176 (493)
.......+ +..+... ..+......+.......+...+..+......+... ...+.++.+++.+..
T Consensus 82 ~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~---- 156 (453)
T 2yg5_A 82 RYREGESVYISSAGER-TRYTGDSFPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQS---- 156 (453)
T ss_dssp CCCCSEEEEECTTSCE-EEECSSSCSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHHHC----
T ss_pred cccCCCEEEEeCCCce-eeccCCCCCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHhhc----
Confidence 43322222 2211111 11211111122221122222121111111111100 112456666665431
Q ss_pred hhhhhchHHHHHHHHHHHH-HhhhcCCcc-cccccccccccccc-----------CCccccccChHHHHHHHhh--cCCc
Q 039105 177 ELRQEGLAYEVLQWYICRM-EAWFAVDAD-MISLKCWDQEQVLS-----------GGHGLMVQGYDPVIKALSK--DIDI 241 (493)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~s~~~~~~~~~~~-----------~g~~~~~~G~~~l~~~L~~--gv~i 241 (493)
. .+.++.++.++ ...++.+++ ++|+..+....... ....++.+|++.++++|.+ |++|
T Consensus 157 ------~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i 229 (453)
T 2yg5_A 157 ------D-DAEARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEALGDDV 229 (453)
T ss_dssp ------S-CHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHHGGGE
T ss_pred ------C-CHHHHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhcCCcE
Confidence 1 22233344443 345666776 77765443211111 1246789999999999986 6799
Q ss_pred cccceeEEEEecCCc-EEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCC
Q 039105 242 RLNQRVTKISNGCNK-VMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW 320 (493)
Q Consensus 242 ~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 320 (493)
++|++|++|..++++ +.|++ +|++++||+||+|+|+..+.+ +.+.|++|+...+.+..+.++...++++.|+.++|
T Consensus 230 ~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~~~~~--l~~~p~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w 306 (453)
T 2yg5_A 230 FLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPNLYSR--ISYDPPLPRRQHQMHQHQSLGLVIKVHAVYETPFW 306 (453)
T ss_dssp ECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHGGGEEECCEEEEEEEESSCGG
T ss_pred EcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHHHHhc--CEeCCCCCHHHHHHHhcCCCcceEEEEEEECCCCC
Confidence 999999999988888 88876 677899999999999998764 34678899988889999999888999999999999
Q ss_pred CCCCcceeecCCC-CceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCC-CCCCcEEEEcccC
Q 039105 321 PNVELLGVVAPTS-YACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPD-ATEPVQYLVSRWG 398 (493)
Q Consensus 321 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~-~~~~~~~~~~~w~ 398 (493)
++..+.+...... .....+++...+++..++++++.+.....+.+++++++++.++++|++++|. ..+|++...++|.
T Consensus 307 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~p~~~~~~~W~ 386 (453)
T 2yg5_A 307 REDGLSGTGFGASEVVQEVYDNTNHEDDRGTLVAFVSDEKADAMFELSAEERKATILASLARYLGPKAEEPVVYYESDWG 386 (453)
T ss_dssp GGGTEEEEEECTTSSSCEEEECCCTTCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHHHHHHHHHCGGGGCCSEEEECCTT
T ss_pred CCCCCCceeecCCCCeEEEEeCCCCCCCCCEEEEEeccHHHHHHhcCCHHHHHHHHHHHHHHHhCccCCCccEEEEeecC
Confidence 7665555543222 2222333332233356788888777777888899999999999999999974 3578888899999
Q ss_pred CCCCCCcccc-CCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHH
Q 039105 399 TDPNTLGCYS-YDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYL 462 (493)
Q Consensus 399 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l 462 (493)
.+++..|+|. ...|+......+.+.+|++||||||++++..++|+++||+.||.+||++|++.+
T Consensus 387 ~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~g~v~gA~~SG~~aA~~i~~~l 451 (453)
T 2yg5_A 387 SEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGYQHVDGAVRMGQRTAADIIARS 451 (453)
T ss_dssp TCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTTTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccccchHHHHHHHHHHHHHHHHHh
Confidence 9999999875 345665444555788899999999999987678899999999999999998764
No 3
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=100.00 E-value=8e-43 Score=356.08 Aligned_cols=410 Identities=22% Similarity=0.293 Sum_probs=291.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCC--cee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGL--TLY 105 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~--~~~ 105 (493)
++||+|||||++||+||++|+++|++|+|+|+++++||+++|...+|+.+|.|++++++ .+.++.++++++|+ +..
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~--~~~~~~~~l~~lgl~~~~~ 116 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHW--HQSHVWREITRYKMHNALS 116 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCT--TSHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecC--ccHHHHHHHHHcCCcceee
Confidence 48999999999999999999999999999999999999999988899999999999974 45678999999999 444
Q ss_pred eeC----CCCcccccCCccceeeecCCCccccHH-HHHHHHHHHHHHHH----HHHHhhh-----------cCCCCCCHH
Q 039105 106 RTS----GDNSVLYDHDLESYALYDMDGNKVEKE-MAIKVGEIFKRILN----ETQKVRD-----------EHTNDMSVL 165 (493)
Q Consensus 106 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~-----------~~~~~~s~~ 165 (493)
... ....+.+.++. .....++.. ....+...+.++.. ....+.. ...++.++.
T Consensus 117 ~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 189 (495)
T 2vvm_A 117 PSFNFSRGVNHFQLRTNP-------TTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYS 189 (495)
T ss_dssp ESCCCSSSCCEEEEESST-------TCCEEECHHHHHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHH
T ss_pred cccccCCCceEEEecCCC-------CceeecCHHHHHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHH
Confidence 332 11111111100 111123321 11111122222221 0000000 001234555
Q ss_pred HHHHHHHhcChhhhhhchHHHHHHHHHHH-HHhhhcCCcccccccccccccc----------ccCCccccccChHHHHHH
Q 039105 166 QAISIVLDRHPELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQEQV----------LSGGHGLMVQGYDPVIKA 234 (493)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~----------~~~g~~~~~~G~~~l~~~ 234 (493)
+++.+... .+++.. +.++.+ +...++.++++.|+..+..... ...+.+.+.+|++.++++
T Consensus 190 ~~l~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~ 260 (495)
T 2vvm_A 190 ERIDQIRD--------ELSLNE-RSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARR 260 (495)
T ss_dssp HHHHHHGG--------GCCHHH-HHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHH
T ss_pred HHHHHhhc--------cCCHHH-HHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHH
Confidence 55554310 022332 233343 3446677788777765432211 112355688999999988
Q ss_pred Hhh-----c-CCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCce
Q 039105 235 LSK-----D-IDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNE 308 (493)
Q Consensus 235 L~~-----g-v~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~ 308 (493)
|.+ | ++|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.. +.+.|+||+...+.+..+.+...
T Consensus 261 l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~--i~~~p~lp~~~~~ai~~~~~~~~ 338 (495)
T 2vvm_A 261 FWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNVLST--IQFSPALSTERISAMQAGHVSMC 338 (495)
T ss_dssp HHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGGGGG--SEEESCCCHHHHHHHHHCCCCCC
T ss_pred HHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHHHhh--eeeCCCCCHHHHHHHHhcCCCce
Confidence 864 4 679999999999988888999999998899999999999999875 34789999998899999999999
Q ss_pred eEEEEEcCCCCCCCCCcceeecCCCCceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCC
Q 039105 309 NKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATE 388 (493)
Q Consensus 309 ~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~ 388 (493)
.++++.|+.++|. .+.+...++......+.+...+++..+++++.... . . +++++..+.++++|++++|+..+
T Consensus 339 ~kv~l~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~-~-~---~~~~e~~~~~~~~L~~~~~~~~~ 411 (495)
T 2vvm_A 339 TKVHAEVDNKDMR--SWTGIAYPFNKLCYAIGDGTTPAGNTHLVCFGNSA-N-H---IQPDEDVRETLKAVGQLAPGTFG 411 (495)
T ss_dssp EEEEEEESCGGGG--GEEEEECSSCSSCEEEEEEECTTSCEEEEEEECST-T-C---CCTTTCHHHHHHHHHTTSTTSCC
T ss_pred eEEEEEECCccCC--CceeEecCCCCcEEEecCCCCCCCCeEEEEEeCcc-c-c---CCCHHHHHHHHHHHHHhcCCCCC
Confidence 9999999998884 45555443332233333344456667777765331 1 1 44556778889999999997667
Q ss_pred CcEEEEcccCCCCCCCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHh
Q 039105 389 PVQYLVSRWGTDPNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 389 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~ 464 (493)
|.....++|..++++.|+|....|+.....++.+.+|.+||||||++++..+++++|||+.||.+||++|++.+.+
T Consensus 412 ~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~g~veGAi~SG~raA~~i~~~l~~ 487 (495)
T 2vvm_A 412 VKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWRSFIDGAIEEGTRAARVVLEELGT 487 (495)
T ss_dssp EEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSSTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred ceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCceEEEhHHHHHHHHHHHHHHHhcc
Confidence 8888899999999999999877788765678888999999999999998767899999999999999999988754
No 4
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=100.00 E-value=2e-41 Score=356.52 Aligned_cols=422 Identities=31% Similarity=0.543 Sum_probs=310.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCC-CCceeecccceeeCCCCCCchHHHHHHhCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYS-FGCPVDMGASWLHGVCNENPLAPLIRRLGLTLY 105 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (493)
..+||+|||||++||+||+.|+++|++|+|+|+++++||++.+... +|+.+|.|++++++. ....+..+++++|++..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~~G~~vd~Ga~~i~G~-~~np~~~l~~~lGl~~~ 413 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSFKGVTVGRGAQIVNGC-INNPVALMCEQLGISMH 413 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCSTTCCEESSCCEEECC-TTCHHHHHHHHHTCCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeeccccCCeEeccCCeEEeCC-ccChHHHHHHHhCCccc
Confidence 4689999999999999999999999999999999999999988654 589999999999874 56678899999999855
Q ss_pred eeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhc--CCCCCCHHHHHHHHHhcChh---hhh
Q 039105 106 RTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDE--HTNDMSVLQAISIVLDRHPE---LRQ 180 (493)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~~~~~~~~~~~~~~---~~~ 180 (493)
.......+ +...+..............+..+.......... ...+.++.+.+.+.+..... +..
T Consensus 414 ~~~~~~~l-----------~~~~g~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~d~sl~~~~~~~~~~~l~~~gv~~ 482 (776)
T 4gut_A 414 KFGERCDL-----------IQEGGRITDPTIDKRMDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQF 482 (776)
T ss_dssp ECCSCCCE-----------ECTTSCBCCHHHHHHHHHHHHHHHHHHHHHGGGCCGGGCCBHHHHHHHHHHHHHHHSCCCC
T ss_pred ccccccce-----------EccCCcccchhHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHhcCCCc
Confidence 43322221 222233333333333333334444333333321 22344555544332211000 000
Q ss_pred hchHHHHHHHHHHHHHhhhcCCcccccccccccc---ccccCCccccccChHHHHHHHhhcCCccccceeEEEEecCCcE
Q 039105 181 EGLAYEVLQWYICRMEAWFAVDADMISLKCWDQE---QVLSGGHGLMVQGYDPVIKALSKDIDIRLNQRVTKISNGCNKV 257 (493)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~---~~~~~g~~~~~~G~~~l~~~L~~gv~i~~~~~V~~I~~~~~~v 257 (493)
.......+...........+.....++...+... ....+....+.+|++.++++|.+|++|++|++|++|+.+++++
T Consensus 483 ~~l~~~~l~~~~~~l~~~~G~~l~~ls~~~~~~~~~~~~~~G~~~~~~~G~~~l~~aLa~gl~I~l~t~V~~I~~~~~~v 562 (776)
T 4gut_A 483 SELEGQVLQFHLSNLEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIQLKSPVQCIDYSGDEV 562 (776)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSCTTSBBTTTTTGGGGSCCCCSCEEECTTCTHHHHHHHHTTSCEESSCCEEEEECSSSSE
T ss_pred cchhHHHHHHHHHHHHHhcCCChHHcChhhhhhhhhHHhcCCCeEEECChHHHHHHHHHhCCcEEcCCeeEEEEEcCCEE
Confidence 0112222222222333445666666666554422 2234556678899999999999999999999999999988899
Q ss_pred EEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCC----CcceeecCCC
Q 039105 258 MVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNV----ELLGVVAPTS 333 (493)
Q Consensus 258 ~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~----~~~g~~~~~~ 333 (493)
.|++.+|++++||+||+|+|+..++...+.+.|+||+...+.+..+.++...++++.|+.+||.+. .+.|.+.+..
T Consensus 563 ~V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~ 642 (776)
T 4gut_A 563 QVTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSA 642 (776)
T ss_dssp EEEETTCCEEEESEEEECCCHHHHHTTCSEEESCCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSG
T ss_pred EEEECCCcEEEcCEEEECCCHHHHhhcccccCCCCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCc
Confidence 999999989999999999999999766778999999999999999999999999999999999743 3344443321
Q ss_pred ---CceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCC--CCCCcEEEEcccCCCCCCCcccc
Q 039105 334 ---YACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPD--ATEPVQYLVSRWGTDPNTLGCYS 408 (493)
Q Consensus 334 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~--~~~~~~~~~~~w~~~~~~~~~~~ 408 (493)
.....+.+...+++..+|+.++.+.....+.+++++++++.++++|+++|+. ...|....+++|..++++.|+|.
T Consensus 643 ~~~~~~~~~~d~~p~g~~~vL~~~i~G~~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys 722 (776)
T 4gut_A 643 SKRGLFAVFYDMDPQKKHSVLMSVIAGEAVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYS 722 (776)
T ss_dssp GGTTEEEEEEESCTTSCSCEEEEEECTHHHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEE
T ss_pred CCCceEEEEecCCCCCCceEEEEEecchhHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCC
Confidence 1122233333344567888899888888899999999999999999999975 35788889999999999999998
Q ss_pred CCCCCCChhHHHHhhCcc-CceEEeeccccCcCcchhHHHHHHHHHHHHHHHH
Q 039105 409 YDVVGMPGDLYERLRAPL-GNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQK 460 (493)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~-~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~ 460 (493)
...|+.....++.+..|+ ++|+|||++++..++|+++||+.||.++|++|++
T Consensus 723 ~~~~g~~~~~~~~L~~p~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 723 FVKTGGSGEAYDIIAEDIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp EEBTTCCTHHHHHHHCCBTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred ccCCCCchhHHHHHhCcCCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 777777767777888886 8999999999988889999999999999999874
No 5
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=100.00 E-value=3.3e-41 Score=353.21 Aligned_cols=424 Identities=33% Similarity=0.527 Sum_probs=297.8
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCcee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLY 105 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (493)
...+||+|||||++||+||+.|+++|++|+|+|+++++||++.+.+..|+.+|.|++++++. .++.+..+.+++|++..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~l~~~l~~~~~ 183 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL-GGNPMAVVSKQVNMELA 183 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEETTEEEESSCCEECCS-BTCHHHHHHHHHTCCEE
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccccCchhhcCcEEEeCC-CCchHHHHHHHhCcchh
Confidence 45689999999999999999999999999999999999999999888899999999998764 45667889999999765
Q ss_pred eeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcC------CCCCCHHHHHH----------
Q 039105 106 RTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEH------TNDMSVLQAIS---------- 169 (493)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~s~~~~~~---------- 169 (493)
.......+ +..++..++..........+..+......+.... ....++.+.+.
T Consensus 184 ~~~~~~~~-----------~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 252 (662)
T 2z3y_A 184 KIKQKCPL-----------YEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHV 252 (662)
T ss_dssp ECCSCCCE-----------ECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCEETTEECBHHHHHHHHHHHHHHHH
T ss_pred cccccceE-----------EeCCCcCCCcchhhhhhHHHHHHHHHHHHHHhcccccccCCCCCCHHHHHHHHHHhhhhhh
Confidence 43322111 1122222322221111111111111111110000 00011111000
Q ss_pred ---------------------------------------------------------------------HHHhcChh---
Q 039105 170 ---------------------------------------------------------------------IVLDRHPE--- 177 (493)
Q Consensus 170 ---------------------------------------------------------------------~~~~~~~~--- 177 (493)
.+......
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~s~~~~~~~l~~~~~~~~~l~~~~~~ 332 (662)
T 2z3y_A 253 KDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGK 332 (662)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCC--------CCTHHHHHHHHHHHHTTTHHHHHHHTHHHHH
T ss_pred hhhhhhhhhhhhhhhhhhhhhhhhhcchhhhHHHHhhhhhhhhhcccccccchhhhhhhhhhhHHHHHhhhhhhhhhhhh
Confidence 00000000
Q ss_pred ---------------hhhhchHHHHHHHHHHHHHhhhcCCcccccccccccc--ccccCCccccccChHHHHHHHhhcCC
Q 039105 178 ---------------LRQEGLAYEVLQWYICRMEAWFAVDADMISLKCWDQE--QVLSGGHGLMVQGYDPVIKALSKDID 240 (493)
Q Consensus 178 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~g~~~~~~G~~~l~~~L~~gv~ 240 (493)
.........++.+++.......+...+.+++..+... ....+.+..+.+|++.|+++|.++++
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~ls~~~~~~~~~~~~~g~~~~~~gG~~~l~~~La~~l~ 412 (662)
T 2z3y_A 333 LEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLD 412 (662)
T ss_dssp HHHHHHHHTTSCCCSCSSCHHHHHHHHHHHHHHHHHTTSCGGGBBTTTTTTTGGGCCBSCCEEETTCTTHHHHHHTTTCE
T ss_pred HHHHHHHhhccCcccccccHHHHHHHHHHHHHHHHhcCCChhhcCHhhcCCCcccccCCceeeecCcHHHHHHHHHhcCc
Confidence 0000001122222222222223445555565544322 22345677889999999999999999
Q ss_pred ccccceeEEEEecCCcEEEEEcC------CcEEEcCEEEEecChhhhhcC--cccccCCCcHHHHHHHhhcCCCceeEEE
Q 039105 241 IRLNQRVTKISNGCNKVMVTVED------GRNFVADAAIVTVPLGILKAN--LIQFEPKLPEWKLSAIADIGVGNENKIA 312 (493)
Q Consensus 241 i~~~~~V~~I~~~~~~v~V~~~~------G~~~~ad~VI~a~~~~~l~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~v~ 312 (493)
|++|++|++|..+++++.|++.+ |++++||+||+|+|+..++.+ .+.|.|+||+...+++..+.++...|++
T Consensus 413 I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~f~P~LP~~k~~Ai~~l~~g~~~KV~ 492 (662)
T 2z3y_A 413 IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVV 492 (662)
T ss_dssp EETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEE
T ss_pred eecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceEEcCCCCHHHHHHHHhCCccceeEEE
Confidence 99999999999998889888766 568999999999999999863 3678999999999999999999999999
Q ss_pred EEcCCCCCCCC-CcceeecCCC---CceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCC--C
Q 039105 313 LRFDNVFWPNV-ELLGVVAPTS---YACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPD--A 386 (493)
Q Consensus 313 l~~~~~~~~~~-~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~--~ 386 (493)
+.|++++|.+. ...|.+.+.. .....+++.. +.++|++++.+.....+..++++++++.++++|+++|+. .
T Consensus 493 l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~---~~~vL~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~ 569 (662)
T 2z3y_A 493 LCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAV 569 (662)
T ss_dssp EECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCS---SSSEEEEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSS
T ss_pred EEcCcccccCCCCceeeecCCCCCCCceeEEEeCC---CCCEEEEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCccc
Confidence 99999999853 4555543322 1122222222 456888888888888888999999999999999999976 3
Q ss_pred CCCcEEEEcccCCCCCCCccccCCCCCCChhHHHHhhCcc-------------CceEEeeccccCcCcchhHHHHHHHHH
Q 039105 387 TEPVQYLVSRWGTDPNTLGCYSYDVVGMPGDLYERLRAPL-------------GNLFFGGEAVSMEHQGSVHGAYSAGVM 453 (493)
Q Consensus 387 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~l~~aGd~~~~~~~g~~egA~~sg~~ 453 (493)
.+|....+++|..+||+.|+|++..|+.....++.+..|+ ++|||||++++..++|+++||+.||.+
T Consensus 570 ~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~r 649 (662)
T 2z3y_A 570 PQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLR 649 (662)
T ss_dssp CCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHH
T ss_pred CCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHH
Confidence 4788888999999999999999888888766667776664 689999999998788999999999999
Q ss_pred HHHHHHHHHHh
Q 039105 454 AAQNCQKYLLK 464 (493)
Q Consensus 454 aa~~i~~~l~~ 464 (493)
||++|++.+.+
T Consensus 650 aA~~i~~~~~g 660 (662)
T 2z3y_A 650 EAGRIADQFLG 660 (662)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHccC
Confidence 99999987653
No 6
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=100.00 E-value=9.5e-42 Score=349.24 Aligned_cols=426 Identities=27% Similarity=0.417 Sum_probs=282.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCCCCCceeeccCC-CCceeecccceeeCCCCCCchHHHHHHhCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS-FKVVLLESRDRLGGRIHTDYS-FGCPVDMGASWLHGVCNENPLAPLIRRLGLTL 104 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (493)
+.+||+|||||+|||+||+.|+++| ++|+|||+++++||++.|... +|+.+|.|++++++. ....+.+++.++|+..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~~G~~~D~G~~~~~~~-~~~~~~~~~~~lg~~~ 85 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGYQGRKYDIGASWHHDT-LTNPLFLEEAQLSLND 85 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECGGGCEEESSCCEECCT-TTCHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecCCCcEEecCCeEEecC-CCChHHHHHHHhCCCC
Confidence 3579999999999999999999999 999999999999999999776 799999999999853 2456778888888631
Q ss_pred eeeCCCCcccccCCccceeeecCCCcccc---HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcC-hhhhh
Q 039105 105 YRTSGDNSVLYDHDLESYALYDMDGNKVE---KEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRH-PELRQ 180 (493)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-~~~~~ 180 (493)
.. ....+..+. ...+..++..+. ......+...+.++...... .....++.++.+++.+++... ..+.
T Consensus 86 ~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~s~~~~l~~~l~~~~~~l~- 157 (516)
T 1rsg_A 86 GR----TRFVFDDDN--FIYIDEERGRVDHDKELLLEIVDNEMSKFAELEFH-QHLGVSDCSFFQLVMKYLLQRRQFLT- 157 (516)
T ss_dssp CC----CCEECCCCC--CEEEETTTEECTTCTTTCHHHHHHHHHHHHHHHC--------CCBHHHHHHHHHHHHGGGSC-
T ss_pred cc----eeEEECCCC--EEEEcCCCccccccHHHHHHHHHHHHHHHHHHHhh-hccCCCCCCHHHHHHHHHHHhhcccC-
Confidence 10 011111110 111111111111 00011112222222211100 111235678888877654321 0000
Q ss_pred hchHHHHHHHHHHHHHhhhcCCccccccccccccccccCCccccccChHHHHHHHhhcC---CccccceeEEEEec-CCc
Q 039105 181 EGLAYEVLQWYICRMEAWFAVDADMISLKCWDQEQVLSGGHGLMVQGYDPVIKALSKDI---DIRLNQRVTKISNG-CNK 256 (493)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~g~~~~~~G~~~l~~~L~~gv---~i~~~~~V~~I~~~-~~~ 256 (493)
....+....+...+..+++..+..+++..+... ..+...++.+ ++.++++|.+.+ +|++|++|++|..+ +++
T Consensus 158 -~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~--~~~~~~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~ 233 (516)
T 1rsg_A 158 -NDQIRYLPQLCRYLELWHGLDWKLLSAKDTYFG--HQGRNAFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKN 233 (516)
T ss_dssp -HHHHHHHHHHHGGGHHHHTBCTTTSBHHHHCCC--CSSCCEEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSC
T ss_pred -HHHHHHHHHHHHHHHHHhCCChHHCChHHHHhh--ccCcchhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCe
Confidence 000111222222233455666666665543321 2233345556 999999998754 69999999999986 567
Q ss_pred EEEEEcCCcEEEcCEEEEecChhhhhcC---------cccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCC--c
Q 039105 257 VMVTVEDGRNFVADAAIVTVPLGILKAN---------LIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVE--L 325 (493)
Q Consensus 257 v~V~~~~G~~~~ad~VI~a~~~~~l~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~--~ 325 (493)
+.|++.+|++++||+||+|+|+..++.. .+.|.|+||+...+++..+.++...|+++.|+.+||++.. +
T Consensus 234 v~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~ 313 (516)
T 1rsg_A 234 VTVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKI 313 (516)
T ss_dssp EEEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEE
T ss_pred EEEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcE
Confidence 9999999988999999999999998643 3678899999999999999999999999999999998642 2
Q ss_pred ceeecCCC--------------------------------Cc-eeeeeccccCCCCcEEEEEecchhhHHhhcC--CHHH
Q 039105 326 LGVVAPTS--------------------------------YA-CGYFLNLHKATGHPVLVYMAAGRFAYDLEKL--SDES 370 (493)
Q Consensus 326 ~g~~~~~~--------------------------------~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~e 370 (493)
.+....+. +. ..++.++..+++.++|+.++.+..+..+..+ ++++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~ 393 (516)
T 1rsg_A 314 VTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQPLFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKER 393 (516)
T ss_dssp EECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSCEEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHH
T ss_pred EEeCCCCccchhhcccCcccchhhhcccccccccccccccccCceeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHH
Confidence 22111110 00 0111222334567788899988888888887 8888
Q ss_pred HHHH---HHHHHHHhCC------CCC---------CCc--EEEEcccCCCCCCCccccCCCCCCCh-hHHHHhh-CccCc
Q 039105 371 AANF---VMMQLKKMFP------DAT---------EPV--QYLVSRWGTDPNTLGCYSYDVVGMPG-DLYERLR-APLGN 428 (493)
Q Consensus 371 ~~~~---~~~~L~~~~p------~~~---------~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 428 (493)
+.+. ++++|.++|+ ++. .|+ .+..++|..+||+.|+|+...|+... .....+. .+.++
T Consensus 394 ~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~r 473 (516)
T 1rsg_A 394 LFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSR 473 (516)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSS
T ss_pred HHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCc
Confidence 7654 6666666654 322 144 77789999999999999977787743 3455554 47789
Q ss_pred eEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHhC
Q 039105 429 LFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQ 465 (493)
Q Consensus 429 l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~~ 465 (493)
|||||++++..++|+++||+.||.++|++|++.+...
T Consensus 474 l~FAGe~ts~~~~g~v~GA~~SG~raA~~i~~~~~~~ 510 (516)
T 1rsg_A 474 IRFAGEHTIMDGAGCAYGAWESGRREATRISDLLKLE 510 (516)
T ss_dssp EEECSTTSCSTTBTSHHHHHHHHHHHHHHHHHHHHGG
T ss_pred EEEeccccccCCCccchhHHHHHHHHHHHHHHHhhhh
Confidence 9999999998788999999999999999999987754
No 7
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=100.00 E-value=8.3e-41 Score=353.69 Aligned_cols=424 Identities=34% Similarity=0.546 Sum_probs=297.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCcee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLY 105 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (493)
...+||+|||||++||+||++|+++|++|+|||+++++||++.+++..|+.+|.|++++++. .++.+..+.+++|++..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~G~~~~~~~-~~~~~~~l~~~lg~~~~ 354 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKGNYVADLGAMVVTGL-GGNPMAVVSKQVNMELA 354 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEETTEEEESSCCEECCS-BTCHHHHHHHHTTCCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeecccccchhcCceEecCC-CCchHHHHHHHhCCchh
Confidence 45689999999999999999999999999999999999999999888899999999998764 35667888999998765
Q ss_pred eeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhc------CCCCCCHHHHHHH---------
Q 039105 106 RTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDE------HTNDMSVLQAISI--------- 170 (493)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~s~~~~~~~--------- 170 (493)
...... .++...+..++..........+..+......+... ...+.++.+.+..
T Consensus 355 ~~~~~~-----------~~~~~~G~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~~~~~~slg~~~e~v~~~~er~~ 423 (852)
T 2xag_A 355 KIKQKC-----------PLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHV 423 (852)
T ss_dssp ECCCCC-----------CEECTTSCBCCHHHHHHHHHHHHHHHHHHHHHHHTSCCCEETTEECBHHHHHHHHHHHHHHHH
T ss_pred hccccc-----------eEEecCCccccchhhhhhhhhhhhhHHHHHHHhhhhhhhcccCCCccHHHHHHHhhhhhhhhc
Confidence 432211 11222333333322211112222222111111110 0001111111100
Q ss_pred ----------------------------------HHhc--------------------------------Chhhh-----
Q 039105 171 ----------------------------------VLDR--------------------------------HPELR----- 179 (493)
Q Consensus 171 ----------------------------------~~~~--------------------------------~~~~~----- 179 (493)
+... ...+.
T Consensus 424 ~~e~l~~~~~i~~~~~~i~~~~~~l~~~~~~l~~l~~~~~~~~~~~~p~~~~~e~s~rs~~~~l~~~~~~~~~l~~~~~~ 503 (852)
T 2xag_A 424 KDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGK 503 (852)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHhhhhhhhhhhhhhhHHHHHHhHHHHHHHHHHHhhhhcccccccchhhhhhhhhhhhHHHHHHHHhhhhhhhhh
Confidence 0000 00000
Q ss_pred -----------------hhchHHHHHHHHHHHHHhhhcCCcccccccccccc--ccccCCccccccChHHHHHHHhhcCC
Q 039105 180 -----------------QEGLAYEVLQWYICRMEAWFAVDADMISLKCWDQE--QVLSGGHGLMVQGYDPVIKALSKDID 240 (493)
Q Consensus 180 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~--~~~~~g~~~~~~G~~~l~~~L~~gv~ 240 (493)
.......++.+++.......+...+.+++..+... ....+.+..+.+|++.|+++|.++++
T Consensus 504 l~~~l~~l~~~~~~~~~ls~~~~~~l~~~~~~~e~~~~~~l~~lSl~~~~~~~~~~~~g~~~~~~gG~~~L~~aLa~~l~ 583 (852)
T 2xag_A 504 LEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLD 583 (852)
T ss_dssp HHHTTHHHHHSCCCSCSSCTTHHHHHHHHHHHHHHHHTSCTTTBBTTTTTGGGGGCCBSCCEEETTCTTHHHHHHTTTCC
T ss_pred HHHHHHhhhccCcccccCCHHHHHHHHHHHhhhcccccCChHhhhhhhhhhccccccCCceEEecCcHHHHHHHHHhCCC
Confidence 00000111222222122222334444454443322 12345667889999999999999999
Q ss_pred ccccceeEEEEecCCcEEEEEcC------CcEEEcCEEEEecChhhhhcC--cccccCCCcHHHHHHHhhcCCCceeEEE
Q 039105 241 IRLNQRVTKISNGCNKVMVTVED------GRNFVADAAIVTVPLGILKAN--LIQFEPKLPEWKLSAIADIGVGNENKIA 312 (493)
Q Consensus 241 i~~~~~V~~I~~~~~~v~V~~~~------G~~~~ad~VI~a~~~~~l~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~v~ 312 (493)
|++|++|++|..+++++.|++.+ |++++||+||+|+|+..++.+ .+.|.|+||....+++..+.|+...+|+
T Consensus 584 I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~F~P~LP~~k~~AI~~l~~g~v~KV~ 663 (852)
T 2xag_A 584 IKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVV 663 (852)
T ss_dssp EECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSEEESCCCHHHHHHHHHSEECCCEEEE
T ss_pred EEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccccCCCCCHHHHHHHHcCCccceEEEE
Confidence 99999999999998889888765 568999999999999999863 3678999999999999999999999999
Q ss_pred EEcCCCCCCCC-CcceeecCCC---CceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCC--
Q 039105 313 LRFDNVFWPNV-ELLGVVAPTS---YACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDA-- 386 (493)
Q Consensus 313 l~~~~~~~~~~-~~~g~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~-- 386 (493)
+.|+.+||.+. ...|.+.+.. ....++++.. +.++|++++.+.....+..++++++++.++++|+++|+..
T Consensus 664 L~F~~~fW~~~~~~fG~l~~~~~~~~~l~~~~~~~---~~pvLl~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~ 740 (852)
T 2xag_A 664 LCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLY---KAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAV 740 (852)
T ss_dssp EECSSCCSCTTCCEEEECCSSSTTTTTTCEEEECS---SSSEEEEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTC
T ss_pred EEcCCcccCCCCCeeeeeccccCCCCceEEEecCC---CCCEEEEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCcccc
Confidence 99999999853 4555543321 1112222222 3458888888888888889999999999999999999763
Q ss_pred CCCcEEEEcccCCCCCCCccccCCCCCCChhHHHHhhCcc-------------CceEEeeccccCcCcchhHHHHHHHHH
Q 039105 387 TEPVQYLVSRWGTDPNTLGCYSYDVVGMPGDLYERLRAPL-------------GNLFFGGEAVSMEHQGSVHGAYSAGVM 453 (493)
Q Consensus 387 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~l~~aGd~~~~~~~g~~egA~~sg~~ 453 (493)
.+|....+++|..++|+.|+|.+..|+.....++.+..|+ ++|||||++++..++|+++||+.||.+
T Consensus 741 ~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~R 820 (852)
T 2xag_A 741 PQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLR 820 (852)
T ss_dssp CCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHH
T ss_pred CCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHH
Confidence 4788889999999999999999888888766677776654 689999999998788999999999999
Q ss_pred HHHHHHHHHHh
Q 039105 454 AAQNCQKYLLK 464 (493)
Q Consensus 454 aa~~i~~~l~~ 464 (493)
||++|++.+..
T Consensus 821 AA~~Il~~l~~ 831 (852)
T 2xag_A 821 EAGRIADQFLG 831 (852)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhhC
Confidence 99999998864
No 8
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=100.00 E-value=4.9e-40 Score=333.07 Aligned_cols=426 Identities=30% Similarity=0.478 Sum_probs=291.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCCCCCceeeccCCCCceeecccceeeCCC--CCCchHHHHHH-hCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVC--NENPLAPLIRR-LGL 102 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~--~~~~~~~l~~~-lg~ 102 (493)
+.+||+|||||++||+||+.|+++|+ +|+|+|+++++||++.+....|+.+|.|++++++.. ....+.+++++ +|+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~lgl 82 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGINVELGANWVEGVNGGKMNPIWPIVNSTLKL 82 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTEEEESSCCEEEEESSSSCCTHHHHHHTTSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCcEEeeCCeEEeccCCCCCCHHHHHHHhhcCC
Confidence 56899999999999999999999998 899999999999999998889999999999998431 34568999999 999
Q ss_pred ceeeeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhh----hcCCCCCCHHH--HHHHHHhcCh
Q 039105 103 TLYRTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVR----DEHTNDMSVLQ--AISIVLDRHP 176 (493)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~--~~~~~~~~~~ 176 (493)
........... ..++..++..++.+........+..+......+. ....++.++.. ++........
T Consensus 83 ~~~~~~~~~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~~~ 154 (472)
T 1b37_A 83 RNFRSDFDYLA--------QNVYKEDGGVYDEDYVQKRIELADSVEEMGEKLSATLHASGRDDMSILAMQRLNEHQPNGP 154 (472)
T ss_dssp CEEECCCTTGG--------GCEECSSSSBCCHHHHHHHHHHHHHHHHHHHHHHHTSCTTCTTCCBHHHHHHHHHTSSSSC
T ss_pred ceeeccCcccc--------ceeEcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhhHHHHHHHhhhccccc
Confidence 86543222110 1112223333333322222221111111111111 11223455443 2221100000
Q ss_pred hhhhhchHHHHHHHHHHHHHhhhcCCccccccccccccc---cccCCccc--cccChHHHHHHHhh-------------c
Q 039105 177 ELRQEGLAYEVLQWYICRMEAWFAVDADMISLKCWDQEQ---VLSGGHGL--MVQGYDPVIKALSK-------------D 238 (493)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~---~~~~g~~~--~~~G~~~l~~~L~~-------------g 238 (493)
....+.+++.+.. ...++.+++..|+..+.... ...++..+ +.+|++.++++|.+ |
T Consensus 155 ----~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~ 228 (472)
T 1b37_A 155 ----ATPVDMVVDYYKF--DYEFAEPPRVTSLQNTVPLATFSDFGDDVYFVADQRGYEAVVYYLAGQYLKTDDKSGKIVD 228 (472)
T ss_dssp ----CSHHHHHHHHHHT--HHHHSSCGGGBBSTTTSSCHHHHHHCSEEEEECCTTCTTHHHHHHHHTTSCBCTTTCCBCC
T ss_pred ----ccHHHHHHHHHHH--hhhhcccccccchhhccccccccccCCceeeeecCCcHHHHHHHHHHhccccccccccccc
Confidence 0001122222211 12234455555543322111 11112222 36899999998864 3
Q ss_pred CCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCC
Q 039105 239 IDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNV 318 (493)
Q Consensus 239 v~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~ 318 (493)
++|++|++|++|..+++++.|++.+|++++||+||+|+|+..+..+++.+.|+||+...+.+..+.+....++++.|+.+
T Consensus 229 ~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp~~~~~ai~~~~~~~~~kv~l~~~~~ 308 (472)
T 1b37_A 229 PRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLPTWKVRAIYQFDMAVYTKIFLKFPRK 308 (472)
T ss_dssp TTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHHHHTTSSEEESCCCHHHHHHHHHSEEECEEEEEEECSSC
T ss_pred cEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHHhccCCeeECCCCCHHHHHHHHhcCCcceeEEEEECCCc
Confidence 57999999999999888899999999899999999999999998766778899999989999999998889999999999
Q ss_pred CCCCCCcceeec--CCCC-ceeeeeccc-cCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCC--CCCcEE
Q 039105 319 FWPNVELLGVVA--PTSY-ACGYFLNLH-KATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDA--TEPVQY 392 (493)
Q Consensus 319 ~~~~~~~~g~~~--~~~~-~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~--~~~~~~ 392 (493)
+|.+....+++. +... ....+.... ...+..+++.++.+.....+..++++++.+.++++|++++|+. .+++..
T Consensus 309 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~a~~~~~~~~~e~~~~~l~~L~~~~Pg~~~~~~~~~ 388 (472)
T 1b37_A 309 FWPEGKGREFFLYASSRRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQSDEQTKAEIMQVLRKMFPGKDVPDATDI 388 (472)
T ss_dssp CSCCSTTCSEEEECCSSTTSSCEEEECTTTSTTCCEEEEEEEHHHHHHHHTSCHHHHHHHHHHHHHHHCTTSCCCCCSEE
T ss_pred CCCCCCCcceEEecccCCccceeeecccCCCCCCCEEEEEechHHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCCCCceE
Confidence 997632122211 1110 111121111 1224566766666655556788899999999999999999873 577888
Q ss_pred EEcccCCCCCCCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHhCC
Q 039105 393 LVSRWGTDPNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQP 466 (493)
Q Consensus 393 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~~~ 466 (493)
.+.+|..+++..|+|....|+.....++.+.+|++||||||+++++.++|+++||+.||++||++|++.+.+..
T Consensus 389 ~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~~~~ 462 (472)
T 1b37_A 389 LVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQKKM 462 (472)
T ss_dssp ECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHHhCc
Confidence 88999999999999987668887667888999999999999999986778999999999999999999987643
No 9
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=100.00 E-value=1.1e-39 Score=327.28 Aligned_cols=402 Identities=25% Similarity=0.291 Sum_probs=280.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCC---CceeecccceeeCCCCCCchHHHHHHhCCce
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSF---GCPVDMGASWLHGVCNENPLAPLIRRLGLTL 104 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~---g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (493)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+...+ |..++.|+++++.. ....+.++++++|++.
T Consensus 1 ~~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~cipg~~~~~g~~~~~~~-~~~~~~~~~~~~g~~~ 79 (431)
T 3k7m_X 1 MYDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESRNVPGLRVEIGGAYLHRK-HHPRLAAELDRYGIPT 79 (431)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECSSSTTCEEESSCCCBCTT-TCHHHHHHHHHHTCCE
T ss_pred CCCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceeccCCCCceEecCCeeeCCC-CcHHHHHHHHHhCCee
Confidence 4799999999999999999999999999999999999999887666 99999999988742 1567889999999986
Q ss_pred eeeCCCCcccc-cCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcC--------CCCCCHHHHHHHHHhcC
Q 039105 105 YRTSGDNSVLY-DHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEH--------TNDMSVLQAISIVLDRH 175 (493)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~s~~~~~~~~~~~~ 175 (493)
..........+ ..+.. +. .....+......+...+.++.....++.... ..+.++.+++...
T Consensus 80 ~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~d~s~~~~l~~~---- 150 (431)
T 3k7m_X 80 AAASEFTSFRHRLGPTA-VD----QAFPIPGSEAVAVEAATYTLLRDAHRIDLEKGLENQDLEDLDIPLNEYVDKL---- 150 (431)
T ss_dssp EECCCCCEECCBSCTTC-CS----SSSCCCGGGHHHHHHHHHHHHHHHTTCCTTTCTTSSSCGGGCSBHHHHHHHH----
T ss_pred eecCCCCcEEEEecCCe-ec----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCccCcchhhhcCCHHHHHHhc----
Confidence 65443333222 11100 00 0001223333334444444444443321110 0125666666542
Q ss_pred hhhhhhchHHHHHHHHHHHHHhhhcCCcccccccccccccc---------ccCCccccccChHHHHHHHhhc-CCccccc
Q 039105 176 PELRQEGLAYEVLQWYICRMEAWFAVDADMISLKCWDQEQV---------LSGGHGLMVQGYDPVIKALSKD-IDIRLNQ 245 (493)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~---------~~~g~~~~~~G~~~l~~~L~~g-v~i~~~~ 245 (493)
...+.....+.......++.++.+++...+..... +......+.+|+..+++++.+. .+|++|+
T Consensus 151 ------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~g~i~~~~ 224 (431)
T 3k7m_X 151 ------DLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSLDEVFSNGSADLVDAMSQEIPEIRLQT 224 (431)
T ss_dssp ------TCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTCCEEETTCTHHHHHHHHTTCSCEESSC
T ss_pred ------CCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecchhhhcCCcHHHHHHHHHhhCCceEeCC
Confidence 11122222111223445666666666544331111 1111225689999999998752 2999999
Q ss_pred eeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCc
Q 039105 246 RVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVEL 325 (493)
Q Consensus 246 ~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~ 325 (493)
+|++|+.+++++.|++.+|++++||+||+|+|+..++. +.+.|++|....+++....+....++.+.|+.+++ ++
T Consensus 225 ~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~~l~~--i~~~p~l~~~~~~~~~~~~~~~~~kv~~~~~~~~~---~i 299 (431)
T 3k7m_X 225 VVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMNTWRR--IVFTPALPERRRSVIEEGHGGQGLKILIHVRGAEA---GI 299 (431)
T ss_dssp CEEEEECSSSSEEEEETTSCCEEEEEEEECSCGGGGGG--SEEESCCCHHHHHHHHHCCCCCEEEEEEEEESCCT---TE
T ss_pred EEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcchHhh--eeeCCCCCHHHHHHHHhCCCcceEEEEEEECCCCc---Cc
Confidence 99999998888999999998899999999999999864 46789999998899999988888999999988764 22
Q ss_pred ceeecCCCCceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCc
Q 039105 326 LGVVAPTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLG 405 (493)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~ 405 (493)
.+ ..+.....++.......+..+++.+..+.. +...+++ .+.+.|++++|+.. |+....++|..++|+.|
T Consensus 300 ~~--~~d~~~~~~~~~~~~~~~~~~l~~~~~g~~---~~~~~~~----~~~~~l~~~~~~~~-~~~~~~~~W~~d~~~~G 369 (431)
T 3k7m_X 300 EC--VGDGIFPTLYDYCEVSESERLLVAFTDSGS---FDPTDIG----AVKDAVLYYLPEVE-VLGIDYHDWIADPLFEG 369 (431)
T ss_dssp EE--EBSSSSSEEEEEEECSSSEEEEEEEEETTT---CCTTCHH----HHHHHHHHHCTTCE-EEEEECCCTTTCTTTSS
T ss_pred eE--cCCCCEEEEEeCcCCCCCCeEEEEEecccc---CCCCCHH----HHHHHHHHhcCCCC-ccEeEecccCCCCCCCC
Confidence 22 111112223332222245567777766543 3333333 45678888899865 77778899999999999
Q ss_pred cccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHH
Q 039105 406 CYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQK 460 (493)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~ 460 (493)
+|+...|++....++.+.+|.++|||||++++..++|+++||+.||.+||++|+.
T Consensus 370 ~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 370 PWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFPGYIEGALETAECAVNAILH 424 (431)
T ss_dssp SSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSSTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCCeEehHHHHHHHHHHHHHHh
Confidence 9998889987788899999999999999999988889999999999999999985
No 10
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=100.00 E-value=4.1e-39 Score=328.91 Aligned_cols=423 Identities=21% Similarity=0.273 Sum_probs=282.2
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccC--CCCceeecccceeeCCCCCCchHHHHHHhCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDY--SFGCPVDMGASWLHGVCNENPLAPLIRRLGL 102 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~--~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~ 102 (493)
+..++||+|||||++||+||+.|+++|++|+|+|+++++||++.+.. ..|+.+|.|+++++. .+..+.++++++|+
T Consensus 30 ~~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~~g~ 107 (498)
T 2iid_A 30 TSNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLPE--KHRIVREYIRKFDL 107 (498)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEETTTTEEEESSCCCEET--TCHHHHHHHHHTTC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccCCCCchhhcCcccccc--hHHHHHHHHHHhCC
Confidence 34578999999999999999999999999999999999999998866 568899999999874 45678999999999
Q ss_pred ceeeeCC--CCcccccCCccc-eeee--cCC--Cccc-cH----HHHHHHHHHHHHHHHHHHHh----hhcCCCCCCHHH
Q 039105 103 TLYRTSG--DNSVLYDHDLES-YALY--DMD--GNKV-EK----EMAIKVGEIFKRILNETQKV----RDEHTNDMSVLQ 166 (493)
Q Consensus 103 ~~~~~~~--~~~~~~~~~~~~-~~~~--~~~--~~~~-~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~ 166 (493)
+...... ...+.+..+... ...+ ... ...+ +. .....+...+.++....... .....++.++.+
T Consensus 108 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 187 (498)
T 2iid_A 108 RLNEFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYEESLGKVVEELKRTNCSYILNKYDTYSTKE 187 (498)
T ss_dssp CEEEECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHHHHTHHHHHHHHHSCHHHHHHHHTTSBHHH
T ss_pred CceeecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHHHHHHHHHHHHhhccHHHHHHHhhhhhHHH
Confidence 8543221 111111111000 0000 000 0000 00 00111111111211111110 001123456666
Q ss_pred HHHHHHhcChhhhhhchHHHHHHHHHHHHH---hhhcCCccccccccccccccccCCccccccChHHHHHHHhhcC--Cc
Q 039105 167 AISIVLDRHPELRQEGLAYEVLQWYICRME---AWFAVDADMISLKCWDQEQVLSGGHGLMVQGYDPVIKALSKDI--DI 241 (493)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s~~~~~~~~~~~~g~~~~~~G~~~l~~~L~~gv--~i 241 (493)
++.... .++....+.+..... .++...... .... ...........+.+|++.++++|.+.+ +|
T Consensus 188 ~l~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~i 255 (498)
T 2iid_A 188 YLIKEG---------DLSPGAVDMIGDLLNEDSGYYVSFIES--LKHD-DIFAYEKRFDEIVDGMDKLPTAMYRDIQDKV 255 (498)
T ss_dssp HHHHTS---------CCCHHHHHHHHHHTTCGGGTTSBHHHH--HHHH-HHHTTCCCEEEETTCTTHHHHHHHHHTGGGE
T ss_pred HHHHcc---------CCCHHHHHHHHHhcCcccchhHHHHHH--HHHH-hccccCcceEEeCCcHHHHHHHHHHhccccc
Confidence 554321 112222221111110 000000000 0000 000112345578899999999998755 89
Q ss_pred cccceeEEEEecCCcEEEEEcCCc----EEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCC
Q 039105 242 RLNQRVTKISNGCNKVMVTVEDGR----NFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDN 317 (493)
Q Consensus 242 ~~~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~ 317 (493)
++|++|++|..+++++.|++.+|+ +++||+||+|+|+..+. .+.+.|+||+...+++..+.+++..++++.|+.
T Consensus 256 ~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~~~~--~i~f~p~Lp~~~~~ai~~l~~~~~~kv~l~~~~ 333 (498)
T 2iid_A 256 HFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSRAVR--LIKFNPPLLPKKAHALRSVHYRSGTKIFLTCTT 333 (498)
T ss_dssp ESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESS
T ss_pred ccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChHHHh--heecCCCCCHHHHHHHHhCCCcceeEEEEEeCC
Confidence 999999999998888999887775 48999999999999875 356789999999999999999999999999999
Q ss_pred CCCCCCCcceeec--CCCCceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCC-----Cc
Q 039105 318 VFWPNVELLGVVA--PTSYACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATE-----PV 390 (493)
Q Consensus 318 ~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~-----~~ 390 (493)
++|.+.++.+... +......++.+...|++..+|+.+..+.....+..++++++.+.++++|+++++.... ..
T Consensus 334 ~~w~~~~~~~~~~~~~~~~~~~~~~s~~~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~L~~~~g~~~~~~~~~~~ 413 (498)
T 2iid_A 334 KFWEDDGIHGGKSTTDLPSRFIYYPNHNFTNGVGVIIAYGIGDDANFFQALDFKDCADIVFNDLSLIHQLPKKDIQSFCY 413 (498)
T ss_dssp CGGGGGTCCSSEEEESSTTCEEECCSSCCTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHHHHHHHTCCHHHHHHHEE
T ss_pred CCccCCCccCCcccCCCCcceEEECCCCCCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHHHHHHcCCChhhhhhhcC
Confidence 9997654433221 1111223343333466677888888777777788889999999999999999973211 12
Q ss_pred EEEEcccCCCCCCCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHh
Q 039105 391 QYLVSRWGTDPNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 391 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~ 464 (493)
...+.+|..++|..|+|....|+......+.+.+|.+||||||++++.. .|+++||+.||.+||++|++.+..
T Consensus 414 ~~~~~~W~~~p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~~~-~g~~~GAi~SG~raA~~i~~~l~~ 486 (498)
T 2iid_A 414 PSVIQKWSLDKYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTAQA-HGWIDSTIKSGLRAARDVNLASEN 486 (498)
T ss_dssp EEEEEEGGGCTTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGSSS-SSCHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccEEEecCCCCCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccccC-CcCHHHHHHHHHHHHHHHHHHhcC
Confidence 3567899999999999987777776667788889999999999999764 489999999999999999998853
No 11
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-38 Score=322.20 Aligned_cols=406 Identities=21% Similarity=0.272 Sum_probs=276.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC------CcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHh
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS------FKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRL 100 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G------~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~l 100 (493)
+++||+|||||++||+||++|+++| ++|+|||+++++||+++|...+|+.+|.|++++.. .+..+.++++++
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~--~~~~~~~l~~~l 81 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLE--RKKSAPQLVKDL 81 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEET--TCTHHHHHHHHT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhh--CCHHHHHHHHHc
Confidence 3589999999999999999999999 99999999999999999988899999999998874 457799999999
Q ss_pred CCceeeeC--CCCcccccCCccceeeecCCC-ccccHHHHHHHHHHH----HHHHHHHHHh--hhcCCCCCCHHHHHHHH
Q 039105 101 GLTLYRTS--GDNSVLYDHDLESYALYDMDG-NKVEKEMAIKVGEIF----KRILNETQKV--RDEHTNDMSVLQAISIV 171 (493)
Q Consensus 101 g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~s~~~~~~~~ 171 (493)
|++..... ....+.+..+. ... +.... ..++..........+ .++......+ .....++.++.+++..
T Consensus 82 gl~~~~~~~~~~~~~~~~~g~-~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~- 158 (470)
T 3i6d_A 82 GLEHLLVNNATGQSYVLVNRT-LHP-MPKGAVMGIPTKIAPFVSTGLFSLSGKARAAMDFILPASKTKDDQSLGEFFRR- 158 (470)
T ss_dssp TCCTTEEECCCCCEEEECSSC-EEE-CCC---------------------CCSHHHHHHHHSCCCSSSSCCBHHHHHHH-
T ss_pred CCcceeecCCCCccEEEECCE-EEE-CCCCcccCCcCchHHhhccCcCCHHHHHHHhcCcccCCCCCCCCcCHHHHHHH-
Confidence 99743221 22222222211 000 00000 001111100000000 0001111111 1223456788887764
Q ss_pred HhcChhhhhhchHHHHHHHHHHH-HHhhhcCCccccccccccccc---------cc-------------------cCCcc
Q 039105 172 LDRHPELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQEQ---------VL-------------------SGGHG 222 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~---------~~-------------------~~g~~ 222 (493)
.+..++.+.++.+ +.+.++.+++++++....... .. .+...
T Consensus 159 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (470)
T 3i6d_A 159 ----------RVGDEVVENLIEPLLSGIYAGDIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQ 228 (470)
T ss_dssp ----------HSCHHHHHHTHHHHHHHTTCSCTTTBBHHHHCGGGCC-------------------------------EE
T ss_pred ----------hcCHHHHHHhccchhcEEecCCHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEE
Confidence 2445566666565 356777788887764322110 00 12345
Q ss_pred ccccChHHHHHHHhhcC---CccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHH
Q 039105 223 LMVQGYDPVIKALSKDI---DIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSA 299 (493)
Q Consensus 223 ~~~~G~~~l~~~L~~gv---~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~ 299 (493)
.+.+|++.++++|.+.+ +|++|++|++|+.+++++.|++.+|++++||+||+|+|+..+.+++ ..+++ .+.
T Consensus 229 ~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~--~~~~~----~~~ 302 (470)
T 3i6d_A 229 TLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGML--SELPA----ISH 302 (470)
T ss_dssp EETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHHT--TTSTT----HHH
T ss_pred EeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHHc--CCchh----hHH
Confidence 78899999999999866 7999999999999888899999999889999999999999987532 22222 467
Q ss_pred HhhcCCCceeEEEEEcCCCCCCCC-CcceeecCCCCc---e-eeee----ccccCCCCcEEEEEecchhhHHhhcCCHHH
Q 039105 300 IADIGVGNENKIALRFDNVFWPNV-ELLGVVAPTSYA---C-GYFL----NLHKATGHPVLVYMAAGRFAYDLEKLSDES 370 (493)
Q Consensus 300 ~~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~~~---~-~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e 370 (493)
+..+.+.+..++.+.|+.++|... ...+++.+.... . ..+. +...|++..++++++.+.....+...++++
T Consensus 303 ~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~ 382 (470)
T 3i6d_A 303 LKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDND 382 (470)
T ss_dssp HHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHH
T ss_pred HhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHH
Confidence 788889899999999999999653 344555443211 1 1111 223456677788877666566678889999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccCCCCCC---ChhHHHHhhCccCceEEeeccccCcCcchhHHH
Q 039105 371 AANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSYDVVGM---PGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGA 447 (493)
Q Consensus 371 ~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA 447 (493)
+++.++++|++++|...+|....+++|... .+.| .++. ....++.+.++.+|||+|||++.. .++++|
T Consensus 383 ~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~gv~~a 453 (470)
T 3i6d_A 383 IINIVLEDLKKVMNINGEPEMTCVTRWHES---MPQY---HVGHKQRIKELREALASAYPGVYMTGASFEG---VGIPDC 453 (470)
T ss_dssp HHHHHHHHHGGGSCCCSCCSEEEEEEEEEE---EEEC---BTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---CSHHHH
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEEEcCCc---cCCC---CCCHHHHHHHHHHHHHhhCCCEEEEeecCCC---CCHHHH
Confidence 999999999999987778888888999742 1222 1332 223445566778999999998642 469999
Q ss_pred HHHHHHHHHHHHHHH
Q 039105 448 YSAGVMAAQNCQKYL 462 (493)
Q Consensus 448 ~~sg~~aa~~i~~~l 462 (493)
+.||.++|++|++.|
T Consensus 454 ~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 454 IDQGKAAVSDALTYL 468 (470)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999887
No 12
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=100.00 E-value=5.5e-38 Score=319.03 Aligned_cols=403 Identities=19% Similarity=0.166 Sum_probs=270.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCcee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLY 105 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (493)
..++||+|||||++||+||+.|+++|++|+|+|+++++||+++|....|+.+|.|++++.. .+..+.++++++|+...
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~--~~~~~~~~~~~~gl~~~ 91 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLD--REPATRALAAALNLEGR 91 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEET--TCHHHHHHHHHTTCGGG
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhh--hhHHHHHHHHHcCCcce
Confidence 4578999999999999999999999999999999999999999998899999999999984 35678999999999632
Q ss_pred ee--C--CCCcccccCCccceeeecCCCccccHHHHHHHHHH---HHHHHHHHHHhhh---cCCCCCCHHHHHHHHHhcC
Q 039105 106 RT--S--GDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEI---FKRILNETQKVRD---EHTNDMSVLQAISIVLDRH 175 (493)
Q Consensus 106 ~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~s~~~~~~~~~~~~ 175 (493)
.. . ....+.+.++. ...++.+....+... +............ ...++.++.+++.+.
T Consensus 92 ~~~~~~~~~~~~~~~~g~---------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~---- 158 (478)
T 2ivd_A 92 IRAADPAAKRRYVYTRGR---------LRSVPASPPAFLASDILPLGARLRVAGELFSRRAPEGVDESLAAFGRRH---- 158 (478)
T ss_dssp EECSCSSCCCEEEEETTE---------EEECCCSHHHHHTCSSSCHHHHHHHHGGGGCCCCCTTCCCBHHHHHHHH----
T ss_pred eeecCccccceEEEECCE---------EEECCCCHHHhccCCCCCHHHHHHHhhhhhcCCCCCCCCCCHHHHHHHh----
Confidence 11 1 11122222111 011111111100000 0000111111111 124567888887752
Q ss_pred hhhhhhchHHHHHHHHHHH-HHhhhcCCcccccccccccc----------------------------cccc----CCcc
Q 039105 176 PELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQE----------------------------QVLS----GGHG 222 (493)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~----------------------------~~~~----~g~~ 222 (493)
+.+++.+.++.+ +...++.+++++++..+... .... ++.+
T Consensus 159 -------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (478)
T 2ivd_A 159 -------LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALS 231 (478)
T ss_dssp -------TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEE
T ss_pred -------hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEE
Confidence 445556665555 34567777777765432100 0011 5667
Q ss_pred ccccChHHHHHHHhh--cCCccccceeEEEEecCCcEEEEE---cCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHH
Q 039105 223 LMVQGYDPVIKALSK--DIDIRLNQRVTKISNGCNKVMVTV---EDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKL 297 (493)
Q Consensus 223 ~~~~G~~~l~~~L~~--gv~i~~~~~V~~I~~~~~~v~V~~---~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~ 297 (493)
++.+|+..++++|.+ |++|+++++|++|..+++++.|++ .+|++++||+||+|+|+..+..+ .|++|+...
T Consensus 232 ~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~l----l~~l~~~~~ 307 (478)
T 2ivd_A 232 TFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKL----LRPLDDALA 307 (478)
T ss_dssp EETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHH----HTTTCHHHH
T ss_pred EECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHH----hhccCHHHH
Confidence 899999999999987 559999999999998887888887 67878999999999999987643 256888888
Q ss_pred HHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCC--C--Cceeeeecc----ccCCCCcEEEEEecchhhHHhhcCCHH
Q 039105 298 SAIADIGVGNENKIALRFDNVFWPNVELLGVVAPT--S--YACGYFLNL----HKATGHPVLVYMAAGRFAYDLEKLSDE 369 (493)
Q Consensus 298 ~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~--~--~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~ 369 (493)
+.+..+.+.+..++++.|+.++|+.....+.+.+. . .....+.+. ..|.+..++++++.+.....+.+.+++
T Consensus 308 ~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~ 387 (478)
T 2ivd_A 308 ALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVGGARQPGLVEQDED 387 (478)
T ss_dssp HHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEECTTCGGGGGSCHH
T ss_pred HHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeCCcCCccccCCCHH
Confidence 88999999988899999999988752223444332 1 111222221 135566778888777666667788999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccCCCCCCCh---hHHHHhhCccCceEEeeccccCcCcchhHH
Q 039105 370 SAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSYDVVGMPG---DLYERLRAPLGNLFFGGEAVSMEHQGSVHG 446 (493)
Q Consensus 370 e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~aGd~~~~~~~g~~eg 446 (493)
++.+.++++|++++|....|.....++|... .+.| .+++.. ..++.+.+ .+|||+||+++. + .+++|
T Consensus 388 ~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~---~p~~---~~g~~~~~~~~~~~~~~-~~~l~~aG~~~~--g-~gv~g 457 (478)
T 2ivd_A 388 ALAALAREELKALAGVTARPSFTRVFRWPLG---IPQY---NLGHLERVAAIDAALQR-LPGLHLIGNAYK--G-VGLND 457 (478)
T ss_dssp HHHHHHHHHHHHHHCCCSCCSEEEEEEESSC---CBCC---BTTHHHHHHHHHHHHHT-STTEEECSTTTS--C-CSHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEECCCc---ccCC---CcCHHHHHHHHHHHHhh-CCCEEEEccCCC--C-CCHHH
Confidence 9999999999999987777877778899752 1112 233321 11222333 689999999963 2 46999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 039105 447 AYSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 447 A~~sg~~aa~~i~~~l~~ 464 (493)
|+.||++||++|++.+.+
T Consensus 458 A~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 458 CIRNAAQLADALVAGNTS 475 (478)
T ss_dssp HHHHHHHHHHHHCC----
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 999999999999876644
No 13
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=100.00 E-value=5.4e-37 Score=312.47 Aligned_cols=423 Identities=19% Similarity=0.252 Sum_probs=270.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCC-----------------CCceeecccceeeCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYS-----------------FGCPVDMGASWLHGV 87 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~-----------------~g~~~d~G~~~~~~~ 87 (493)
+++.+||+|||||++||+||++|+++|++|+|||+++++||++++... .|..+|.|+++++.
T Consensus 8 ~~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~- 86 (489)
T 2jae_A 8 VKGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGSEETDLSGETQKCTFSEGHFYNVGATRIPQ- 86 (489)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTCEEECTTSCEEECCCCTTCEEESSCCCEET-
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCcccccccchhhhhcccCCCcCCcchhhccc-
Confidence 456789999999999999999999999999999999999999887554 57789999998874
Q ss_pred CCCCchHHHHHHhCCceeeeCCC--Ccccc-cCCccceeeecCCCccccHHH-HHHHHHHHHHHHHHHHHhhhcC-----
Q 039105 88 CNENPLAPLIRRLGLTLYRTSGD--NSVLY-DHDLESYALYDMDGNKVEKEM-AIKVGEIFKRILNETQKVRDEH----- 158 (493)
Q Consensus 88 ~~~~~~~~l~~~lg~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----- 158 (493)
.+ .+.++++++|++....... ..+++ ..+. ...+..+.... ...+...+..+...........
T Consensus 87 -~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (489)
T 2jae_A 87 -SH-ITLDYCRELGVEIQGFGNQNANTFVNYQSDT------SLSGQSVTYRAAKADTFGYMSELLKKATDQGALDQVLSR 158 (489)
T ss_dssp -TS-THHHHHHHHTCCEEEECCCCTTSEEECCCSS------TTTTCCEEHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCH
T ss_pred -HH-HHHHHHHHcCCceEEccccCCCceEEecCCc------ccCCccccHHHHhhhhhccHHHHHHHHHhccccccccch
Confidence 34 8999999999986543221 12221 1110 00122222111 1111111111111111100000
Q ss_pred CCCCCHHHHHHHHHhcChhhhhhchHHHHHHHHHHH-HHh-hhcC-----Ccccccccccccc------ccccCCccccc
Q 039105 159 TNDMSVLQAISIVLDRHPELRQEGLAYEVLQWYICR-MEA-WFAV-----DADMISLKCWDQE------QVLSGGHGLMV 225 (493)
Q Consensus 159 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~-----~~~~~s~~~~~~~------~~~~~g~~~~~ 225 (493)
.++.++.+++.++...... ..+.......++.+ ... +.+. +.+.++...+... .....+.+++.
T Consensus 159 ~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (489)
T 2jae_A 159 EDKDALSEFLSDFGDLSDD---GRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMMFTPV 235 (489)
T ss_dssp HHHHHHHHHHHHHTTCCTT---SCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSEEEET
T ss_pred hhHHHHHHHHHHhhhhhhc---cccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccEEeec
Confidence 0112444444432110000 00000000000000 000 0000 0001111101100 01123456789
Q ss_pred cChHHHHHHHhhc---CCccccceeEEEEecCCcEEEEEcCC---cEEEcCEEEEecChhhhhcCcccccCCCcHHHHHH
Q 039105 226 QGYDPVIKALSKD---IDIRLNQRVTKISNGCNKVMVTVEDG---RNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSA 299 (493)
Q Consensus 226 ~G~~~l~~~L~~g---v~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~ 299 (493)
+|++.++++|.+. .+|++|++|++|+.+++++.|++.+| ++++||+||+|+|+..+..+ .+ ++|+...+.
T Consensus 236 gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~~l~~l--~~--~l~~~~~~~ 311 (489)
T 2jae_A 236 GGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPHLVGRL--QN--NLPGDVLTA 311 (489)
T ss_dssp TCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHHHHTTS--EE--CCCHHHHHH
T ss_pred CCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHHHHHhC--cc--CCCHHHHHH
Confidence 9999999999874 57999999999999888999988876 67999999999999988653 22 688888889
Q ss_pred HhhcCCCceeEEEEEcCCCCCCCC-Ccceeec-CC-CCceeeeeccccCCCCcEEE-EEecchhhHHhhcCCHHHHHHHH
Q 039105 300 IADIGVGNENKIALRFDNVFWPNV-ELLGVVA-PT-SYACGYFLNLHKATGHPVLV-YMAAGRFAYDLEKLSDESAANFV 375 (493)
Q Consensus 300 ~~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~-~~-~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~e~~~~~ 375 (493)
+..+.|.+..++++.|+.++|.+. .+.|... .+ .....++++...+....+++ +++.+.....+..++++++++.+
T Consensus 312 l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~ 391 (489)
T 2jae_A 312 LKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYNSDRGVVVAYYSSGKRQEAFESLTHRQRLAKA 391 (489)
T ss_dssp HHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTTSSCEEEEEEEEETHHHHHHHTSCHHHHHHHH
T ss_pred HHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCCCCCCEEEEEeeCCchhhhhhcCCHHHHHHHH
Confidence 999999999999999999999654 4443221 11 11222223222222233444 56777777778889999999999
Q ss_pred HHHHHHhCCC-C-CCCcEEEEcccCCCCCCCccccCCC------CCCChhHHHHhhCccCceEEeeccccCcCcchhHHH
Q 039105 376 MMQLKKMFPD-A-TEPVQYLVSRWGTDPNTLGCYSYDV------VGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGA 447 (493)
Q Consensus 376 ~~~L~~~~p~-~-~~~~~~~~~~w~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA 447 (493)
+++|++++|. . ..+......+|..+++..|+|.... |+.....++.+.+|.+||||||++++. ++++++||
T Consensus 392 l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~faG~~~~~-~~~~v~gA 470 (489)
T 2jae_A 392 IAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKIYFAGDHLSN-AIAWQHGA 470 (489)
T ss_dssp HHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTEEECSGGGBS-STTSHHHH
T ss_pred HHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcEEEeEHHhcc-CccHHHHH
Confidence 9999999987 3 4566666788999999999886544 666556778888999999999999874 56899999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 039105 448 YSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 448 ~~sg~~aa~~i~~~l~~ 464 (493)
+.||.++|++|++.++.
T Consensus 471 i~sg~~aA~~i~~~l~~ 487 (489)
T 2jae_A 471 LTSARDVVTHIHERVAQ 487 (489)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999988764
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=100.00 E-value=2e-36 Score=309.62 Aligned_cols=406 Identities=22% Similarity=0.225 Sum_probs=267.6
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCce
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTL 104 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (493)
|.+++||+|||||++||+||++|+++|++|+|+|+++++||+++|....|+.+|.|+++++. .+..+.++++++|+..
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~lgl~~ 87 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTE--SEGDVTFLIDSLGLRE 87 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCC--CSHHHHHHHHHTTCGG
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCccccc--CcHHHHHHHHHcCCcc
Confidence 45679999999999999999999999999999999999999999988899999999999873 3567899999999974
Q ss_pred eeeCC---CCcccccCCccceeeecCCCccccHHHHHHH-------HHHHHHHHHHHHHhh----hcCCCCCCHHHHHHH
Q 039105 105 YRTSG---DNSVLYDHDLESYALYDMDGNKVEKEMAIKV-------GEIFKRILNETQKVR----DEHTNDMSVLQAISI 170 (493)
Q Consensus 105 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~ 170 (493)
..... ...+.+.++. ...++.+..... ...+..+........ ....++.++.+|+.+
T Consensus 88 ~~~~~~~~~~~~~~~~g~---------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~ 158 (504)
T 1sez_A 88 KQQFPLSQNKRYIARNGT---------PVLLPSNPIDLIKSNFLSTGSKLQMLLEPILWKNKKLSQVSDSHESVSGFFQR 158 (504)
T ss_dssp GEECCSSCCCEEEESSSS---------EEECCSSHHHHHHSSSSCHHHHHHHHTHHHHC----------CCCBHHHHHHH
T ss_pred cceeccCCCceEEEECCe---------EEECCCCHHHHhccccCCHHHHHHHhHhhhccCcccccccCCCCccHHHHHHH
Confidence 32211 1111111110 011111111000 011111111110000 012345788888765
Q ss_pred HHhcChhhhhhchHHHHHHHHHHHH-HhhhcCCccccccccccc-------------------cc---------------
Q 039105 171 VLDRHPELRQEGLAYEVLQWYICRM-EAWFAVDADMISLKCWDQ-------------------EQ--------------- 215 (493)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~-------------------~~--------------- 215 (493)
. +.+++++.++.++ .+.++.+++++|+..... ..
T Consensus 159 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (504)
T 1sez_A 159 H-----------FGKEVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSA 227 (504)
T ss_dssp H-----------HCHHHHHTTHHHHHHHHHSCCGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCS
T ss_pred H-----------cCHHHHHHHHHHHHccccCCChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhh
Confidence 3 4556666666654 456777777776543210 00
Q ss_pred --cccCCccccccChHHHHHHHhhc---CCccccceeEEEEecCCc------EEEEEc--CC---cEEEcCEEEEecChh
Q 039105 216 --VLSGGHGLMVQGYDPVIKALSKD---IDIRLNQRVTKISNGCNK------VMVTVE--DG---RNFVADAAIVTVPLG 279 (493)
Q Consensus 216 --~~~~g~~~~~~G~~~l~~~L~~g---v~i~~~~~V~~I~~~~~~------v~V~~~--~G---~~~~ad~VI~a~~~~ 279 (493)
....+.+++.+|++.|+++|++. .+|++|++|++|..++++ +.|++. +| ++++||+||+|+|+.
T Consensus 228 ~~~~~~~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~ 307 (504)
T 1sez_A 228 NKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLC 307 (504)
T ss_dssp CCSTTCSCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHH
T ss_pred ccccCCceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHH
Confidence 01224677899999999999874 579999999999987766 666654 55 578999999999999
Q ss_pred hhhcCccc-ccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCC-CcceeecCCC-------Cceeee----eccccCC
Q 039105 280 ILKANLIQ-FEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNV-ELLGVVAPTS-------YACGYF----LNLHKAT 346 (493)
Q Consensus 280 ~l~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~-~~~g~~~~~~-------~~~~~~----~~~~~~~ 346 (493)
.+.+++.. ..+++++.. +..+.+.+..++.+.|+.++|+.. ...+++.+.. .....+ ++...|+
T Consensus 308 ~l~~ll~~~~~~~~~~~~---l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~p~ 384 (504)
T 1sez_A 308 DVKSMKIAKRGNPFLLNF---IPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPN 384 (504)
T ss_dssp HHHTSEEESSSSBCCCTT---SCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGSCT
T ss_pred HHHHHhhcccCCcccHHH---HhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcCCC
Confidence 98875421 112232221 456677777889999999888642 2234444321 111111 1223466
Q ss_pred CCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccCCCCCCCh--hHHHHhhC
Q 039105 347 GHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSYDVVGMPG--DLYERLRA 424 (493)
Q Consensus 347 ~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 424 (493)
+..++++++.+.....+...+++++++.++++|+++++...+|....+.+|... +....+++.. .......+
T Consensus 385 g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~------~p~~~~g~~~~~~~~~~~~~ 458 (504)
T 1sez_A 385 NVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKA------FPLYGHNYDSVLDAIDKMEK 458 (504)
T ss_dssp TEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEE------EECCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCC------CCccCcCHHHHHHHHHHHHH
Confidence 667788888776666788889999999999999999987667878888899642 1111122211 12234556
Q ss_pred ccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHh
Q 039105 425 PLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 425 ~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~ 464 (493)
|++|||+||++++ ..++++|+.||.+||++|++.+.+
T Consensus 459 ~~~~l~~aG~~~~---g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 459 NLPGLFYAGNHRG---GLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp HSTTEEECCSSSS---CSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred hCCCEEEEeecCC---CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 7899999999975 258999999999999999988754
No 15
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=100.00 E-value=4.1e-37 Score=312.28 Aligned_cols=402 Identities=19% Similarity=0.228 Sum_probs=274.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCcee
Q 039105 28 LPSVIVIGGGISGLAAARILYDAS--FKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLY 105 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~ 105 (493)
++||+|||||++||+||++|+++| ++|+|+|+++++||+++|....|+.+|.|++++.. ....+.++++++|++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~--~~~~~~~l~~~lg~~~~ 81 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVA--RKHILTDLIEAIGLGEK 81 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEET--TSTHHHHHHHHTTCGGG
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhc--ccHHHHHHHHHcCCcce
Confidence 589999999999999999999999 99999999999999999998899999999999874 46779999999999843
Q ss_pred eeC--CCCcccccCCccceeeecCCC-ccccHHHHHHH-------HHHHHHHHHHHHHhhhc----CCCCCCHHHHHHHH
Q 039105 106 RTS--GDNSVLYDHDLESYALYDMDG-NKVEKEMAIKV-------GEIFKRILNETQKVRDE----HTNDMSVLQAISIV 171 (493)
Q Consensus 106 ~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~----~~~~~s~~~~~~~~ 171 (493)
... ....+.+..+.. ..+.... ..+|......+ ...+ .+..... .... ..++.++.+++.+
T Consensus 82 ~~~~~~~~~~~~~~g~~--~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~s~~~~l~~- 156 (475)
T 3lov_A 82 LVRNNTSQAFILDTGGL--HPIPKGAVMGIPTDLDLFRQTTLLTEEEKQ-EVADLLL-HPSDSLRIPEQDIPLGEYLRP- 156 (475)
T ss_dssp EEECCCCCEEEEETTEE--EECCSSEETTEESCHHHHTTCSSSCHHHHH-HHHHHHH-SCCTTCCCCSSCCBHHHHHHH-
T ss_pred EeecCCCceEEEECCEE--EECCCcccccCcCchHHHhhccCCChhHHH-HhhCccc-CCcccccCCCCCcCHHHHHHH-
Confidence 321 222222222210 0000000 00111000000 0001 1111111 1111 3456788888765
Q ss_pred HhcChhhhhhchHHHHHHHHHHH-HHhhhcCCccccccccccccc---------c----------------------ccC
Q 039105 172 LDRHPELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQEQ---------V----------------------LSG 219 (493)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~---------~----------------------~~~ 219 (493)
.+..++.+.++.+ +.+.++.+++++|+....... . ..+
T Consensus 157 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (475)
T 3lov_A 157 ----------RLGDALVEKLIEPLLSGIYAGNIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATG 226 (475)
T ss_dssp ----------HHCHHHHHHTHHHHHHGGGCCCTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC--------------CC
T ss_pred ----------HhCHHHHHHHHHHHhceeecCChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCC
Confidence 2445666666666 456788888888765332110 0 023
Q ss_pred CccccccChHHHHHHHhhcC---CccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHH
Q 039105 220 GHGLMVQGYDPVIKALSKDI---DIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWK 296 (493)
Q Consensus 220 g~~~~~~G~~~l~~~L~~gv---~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~ 296 (493)
....+.+|+..++++|.+.+ +|++|++|++|+.+++++.|++.+| +++||+||+|+|+..+.+++ ..+++
T Consensus 227 ~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll--~~~~~---- 299 (475)
T 3lov_A 227 QFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLL--PDAHL---- 299 (475)
T ss_dssp SEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHC--TTSCC----
T ss_pred cEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHc--CccCH----
Confidence 35678999999999998765 8999999999999888899999999 89999999999999987642 22222
Q ss_pred HHHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCCCCce----eeee----ccccCCCCcEEEEEecchhhHHhhcCCH
Q 039105 297 LSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYAC----GYFL----NLHKATGHPVLVYMAAGRFAYDLEKLSD 368 (493)
Q Consensus 297 ~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~----~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 368 (493)
+.+..+.+.+..++.+.|+.+++.+....+++.+..... ..+. +...|+ ..++++++.+.....+.+.++
T Consensus 300 -~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~-~~~l~~~~~~~~~~~~~~~~~ 377 (475)
T 3lov_A 300 -PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPD-HTVLRAFVGRPGNDHLVHESD 377 (475)
T ss_dssp -HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTT-EEEEEEEECBTTBCGGGGSCH
T ss_pred -HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCC-cEEEEEEeCCCCCCcccCCCH
Confidence 667788998889999999988743333445554433111 1121 122344 556777776655667788899
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccCCCCCC---ChhHHHHhhCccCceEEeeccccCcCcchhH
Q 039105 369 ESAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSYDVVGM---PGDLYERLRAPLGNLFFGGEAVSMEHQGSVH 445 (493)
Q Consensus 369 ~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~e 445 (493)
+++++.++++|+++++...+|....+++|... .+.| .++. ....++.+.++.+|||+||+++.. .+++
T Consensus 378 e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a---~p~~---~~g~~~~~~~~~~~l~~~~~~l~~aG~~~~g---~g~~ 448 (475)
T 3lov_A 378 EVLQQAVLQDLEKICGRTLEPKQVIISRLMDG---LPAY---TVGHADRIQRVREEVLAQYPGIYLAGLAYDG---VGLP 448 (475)
T ss_dssp HHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEE---EECC---CTTHHHHHHHHHHHHHHHSTTEEECSTTTSC---SSHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEEEEcccC---CCCC---CCChHHHHHHHHHHHHhhCCCEEEEccCCCC---CCHH
Confidence 99999999999999987667888889999753 1112 2332 123445566778999999998653 4799
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 039105 446 GAYSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 446 gA~~sg~~aa~~i~~~l~~ 464 (493)
+|+.||.++|++|++.+..
T Consensus 449 ~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 449 DCVASAKTMIESIELEQSH 467 (475)
T ss_dssp HHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999999886543
No 16
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=8.6e-36 Score=298.33 Aligned_cols=396 Identities=16% Similarity=0.109 Sum_probs=256.7
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCceeeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLYRTS 108 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 108 (493)
+||+|||||++||+||++|+++|++|+|+||++++||+++++..+|+.+|.|++++.+......+.++++++|++.....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIVR 80 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEEe
Confidence 58999999999999999999999999999999999999999989999999998665543345678999999998643222
Q ss_pred CCC-ccccc--CCc------cceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhhh
Q 039105 109 GDN-SVLYD--HDL------ESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPELR 179 (493)
Q Consensus 109 ~~~-~~~~~--~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 179 (493)
... ...+. ... .....+......+..... .++.............+.++.+++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~s~~~~l~~~-------- 145 (425)
T 3ka7_A 81 SEMTTVRVPLKKGNPDYVKGFKDISFNDFPSLLSYKDR-------MKIALLIVSTRKNRPSGSSLQAWIKSQ-------- 145 (425)
T ss_dssp CCCCEEEEESSTTCCSSTTCEEEEEGGGGGGGSCHHHH-------HHHHHHHHHTTTSCCCSSBHHHHHHHH--------
T ss_pred cCCceEEeecCCCcccccccccceehhhhhhhCCHHHH-------HHHHHHHHhhhhcCCCCCCHHHHHHHh--------
Confidence 111 11111 000 000000000011111110 011111222222334567888888764
Q ss_pred hhchHHHHHHHHHHHH-HhhhcCCcccccccccc---ccccccCCccccccChHHHHHHHhh-----cCCccccceeEEE
Q 039105 180 QEGLAYEVLQWYICRM-EAWFAVDADMISLKCWD---QEQVLSGGHGLMVQGYDPVIKALSK-----DIDIRLNQRVTKI 250 (493)
Q Consensus 180 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~---~~~~~~~g~~~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I 250 (493)
+..+.++.++.++ ...++.+++.+++.... ......++..++.+|+..++++|.+ |++|++|++|++|
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i 222 (425)
T 3ka7_A 146 ---VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKI 222 (425)
T ss_dssp ---CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEE
T ss_pred ---cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEE
Confidence 2334444555443 34567777777765332 1112346778899999999888864 7899999999999
Q ss_pred EecCCcEE-EEEcCCcEEEcCEEEEecChhhhhcCcccccCCC--cHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCcce
Q 039105 251 SNGCNKVM-VTVEDGRNFVADAAIVTVPLGILKANLIQFEPKL--PEWKLSAIADIGVGNENKIALRFDNVFWPNVELLG 327 (493)
Q Consensus 251 ~~~~~~v~-V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g 327 (493)
..+++++. |+++ |++++||.||+|+|+..+.++ +...+.+ |+...+.+..+.+.+..++.+.++++.+... +
T Consensus 223 ~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~~~~l-l~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~---~ 297 (425)
T 3ka7_A 223 LIENGKAAGIIAD-DRIHDADLVISNLGHAATAVL-CSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLVGHT---G 297 (425)
T ss_dssp EEETTEEEEEEET-TEEEECSEEEECSCHHHHHHH-TTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSSCSS---S
T ss_pred EEECCEEEEEEEC-CEEEECCEEEECCCHHHHHHh-cCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCccCcC---E
Confidence 99888875 6664 778999999999999988653 3222333 6777788888988887889999988765322 2
Q ss_pred eecCCCCc-e--eee----eccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCC
Q 039105 328 VVAPTSYA-C--GYF----LNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTD 400 (493)
Q Consensus 328 ~~~~~~~~-~--~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~ 400 (493)
.+.+.+.. . ..+ +....|.|+.++.++..... + ..+. .+++++.++++|++++|+. .+....+.+|...
T Consensus 298 ~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~-~-~~~~-~~~~~~~~~~~l~~~~p~~-~~~~~~v~~~~~~ 373 (425)
T 3ka7_A 298 VLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP-E-NVKN-LESEIEMGLEDLKEIFPGK-RYEVLLIQSYHDE 373 (425)
T ss_dssp EEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-G-GGGG-HHHHHHHHHHHHHHHSTTC-CEEEEEEEEEBTT
T ss_pred EEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-c-cccc-hHHHHHHHHHHHHHhCCCC-ceEEEEEEEECCC
Confidence 22221111 1 111 22234667777766554322 1 1112 2456799999999999973 3333456778642
Q ss_pred CCCCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHH
Q 039105 401 PNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQ 459 (493)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~ 459 (493)
.+.|. ++. ..++...+|++|||+|||++.+.++-++++|+.||++||++|+
T Consensus 374 ---~P~~~---~~~--~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 374 ---WPVNR---AAS--GTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp ---BCSBS---SCT--TCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC--
T ss_pred ---ccccc---ccc--CCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhh
Confidence 12221 222 2335567788999999999988665699999999999999876
No 17
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=5.7e-36 Score=306.05 Aligned_cols=429 Identities=17% Similarity=0.165 Sum_probs=209.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCce---
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTL--- 104 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~--- 104 (493)
|++|||||||++||+||++|+++|++|+||||++++||+++|+..+|+.+|.|++++.. ...+.++++.+|...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~G~~~D~G~~~~~~---~~~~~~l~~~~g~~~~~~ 77 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQGFTFDAGPTVITD---PSAIEELFALAGKQLKEY 77 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEETTEEEECSCCCBSC---THHHHHHHHTTTCCGGGT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeCCEEEecCceeecC---chhHHHHHHHhcchhhhc
Confidence 68999999999999999999999999999999999999999999999999999998853 345678888887542
Q ss_pred ---eeeCCCCcccccCCccceeeecCCCccccHHHHH---HHHHHHHHHHHHHHHhhhc------CCCCCCHHHHHHHHH
Q 039105 105 ---YRTSGDNSVLYDHDLESYALYDMDGNKVEKEMAI---KVGEIFKRILNETQKVRDE------HTNDMSVLQAISIVL 172 (493)
Q Consensus 105 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~~s~~~~~~~~~ 172 (493)
.+......+.+.++ ..+. +..+...+...... .-...+.++......+... .....+..+.+....
T Consensus 78 ~~~~~~~~~~~~~~~~g-~~~~-~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (501)
T 4dgk_A 78 VELLPVTPFYRLCWESG-KVFN-YDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRDMLRAAP 155 (501)
T ss_dssp CCEEEESSSEEEEETTS-CEEE-ECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHHHHHSGG
T ss_pred eeeEecCcceEEEcCCC-CEEE-eeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhhhhhhhh
Confidence 11111111111111 0111 11111111111100 0112334444444433221 111233333332110
Q ss_pred hcC--------hhhhhhchHHHHHHHHHHHHHhhhcCCccccccccc-cccccccCCccccccChHHHHHHHhh-----c
Q 039105 173 DRH--------PELRQEGLAYEVLQWYICRMEAWFAVDADMISLKCW-DQEQVLSGGHGLMVQGYDPVIKALSK-----D 238 (493)
Q Consensus 173 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~g~~~~~~G~~~l~~~L~~-----g 238 (493)
... .......+..+.++.++.......+..+...+.... ........|.+++++|++.++++|++ |
T Consensus 156 ~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~p~~~~~~~~~~~~~~~~~G~~~p~GG~~~l~~aL~~~~~~~G 235 (501)
T 4dgk_A 156 QLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGNPFATSSIYTLIHALEREWGVWFPRGGTGALVQGMIKLFQDLG 235 (501)
T ss_dssp GTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSCC--CCCTHHHHHHHHSCCCEEEETTHHHHHHHHHHHHHHHTT
T ss_pred hhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCCcchhhhhhhhhhhhhccCCeEEeCCCCcchHHHHHHHHHHhC
Confidence 000 000111122222333333323334444433332221 12223345677899999999999864 8
Q ss_pred CCccccceeEEEEecCCcEE-EEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCcee-EEEEEcC
Q 039105 239 IDIRLNQRVTKISNGCNKVM-VTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNEN-KIALRFD 316 (493)
Q Consensus 239 v~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~v~l~~~ 316 (493)
++|++|++|++|..++++++ |++.+|+++.||.||+++++..+.+.++.- .+.+....+.+...++.... ++++.++
T Consensus 236 g~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~-~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 314 (501)
T 4dgk_A 236 GEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQ-HPAAVKQSNKLQTKRMSNSLFVLYFGLN 314 (501)
T ss_dssp CEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC----------------------------CCEEEEEEEEES
T ss_pred CceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccc-cccchhhhhhhhccccCCceeEEEeccc
Confidence 89999999999999998875 899999999999999999887765433322 22334444555556554443 5677666
Q ss_pred CCCCCCCCcceeecCC---------------CCceee------eeccccCCCCcEEEEEecchhh----HHhhcCCHHHH
Q 039105 317 NVFWPNVELLGVVAPT---------------SYACGY------FLNLHKATGHPVLVYMAAGRFA----YDLEKLSDESA 371 (493)
Q Consensus 317 ~~~~~~~~~~g~~~~~---------------~~~~~~------~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~e~ 371 (493)
.+...-....-++.++ .....+ .+....|.|+..+.+++..... ..|. ...+++
T Consensus 315 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~-~~~~~~ 393 (501)
T 4dgk_A 315 HHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWT-VEGPKL 393 (501)
T ss_dssp SCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHH-HHHHHH
T ss_pred CCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHH-HHHHHH
Confidence 5432111000000000 000011 1122346677776666543211 1121 124568
Q ss_pred HHHHHHHHHHh-CCCCCCCcEEEEc----ccCCCCC-CCcc-ccCC-CCCCChhHHHHh-hCccCceEEeeccccCcCcc
Q 039105 372 ANFVMMQLKKM-FPDATEPVQYLVS----RWGTDPN-TLGC-YSYD-VVGMPGDLYERL-RAPLGNLFFGGEAVSMEHQG 442 (493)
Q Consensus 372 ~~~~~~~L~~~-~p~~~~~~~~~~~----~w~~~~~-~~~~-~~~~-~~~~~~~~~~~~-~~~~~~l~~aGd~~~~~~~g 442 (493)
.+++++.|++. +|++++.+..... .|..... ..|. |... .+.+....+|.. .+|++|||+||++++++ +
T Consensus 394 ~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG--~ 471 (501)
T 4dgk_A 394 RDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPG--A 471 (501)
T ss_dssp HHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC------------------------------CCTTEEECCCH-------
T ss_pred HHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCCCc--c
Confidence 88899999875 4887654432211 2322111 1121 1111 122222344543 47899999999998652 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhC
Q 039105 443 SVHGAYSAGVMAAQNCQKYLLKQ 465 (493)
Q Consensus 443 ~~egA~~sg~~aa~~i~~~l~~~ 465 (493)
++.||+.||+.||+.|+++|+..
T Consensus 472 Gv~ga~~SG~~aA~~il~dL~gG 494 (501)
T 4dgk_A 472 GIPGVIGSAKATAGLMLEDLIGG 494 (501)
T ss_dssp -HHHHHHHHHHHHHHHHHHHC--
T ss_pred cHHHHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999998753
No 18
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=100.00 E-value=4.3e-35 Score=300.52 Aligned_cols=404 Identities=14% Similarity=0.113 Sum_probs=254.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeeCCCCCceeecc-CCCCceeecccceeeCCCCCCchHHHHHHhCCc-
Q 039105 27 SLPSVIVIGGGISGLAAARILYD-ASFKVVLLESRDRLGGRIHTD-YSFGCPVDMGASWLHGVCNENPLAPLIRRLGLT- 103 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E~~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~- 103 (493)
..+||||||||+|||+||++|+| .|++|+||||++++||+++|. ..+|+.+|.|+|+++. .+..+.+++++++..
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~G~h~~~~--~~~~v~~l~~e~~~~~ 86 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDVGGHVIFS--HYKYFDDCLDEALPKE 86 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEESSCCCCCC--CBHHHHHHHHHHSCSG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEeCceEecC--CCHHHHHHHHHhCCcc
Confidence 46899999999999999999998 599999999999999999985 5689999999999873 456789999998764
Q ss_pred --eeeeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhhhhh
Q 039105 104 --LYRTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPELRQE 181 (493)
Q Consensus 104 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 181 (493)
.........+.+++....++ +......++...... ....+...............++.+++..
T Consensus 87 ~~~~~~~~~~~i~~~g~~~~~p-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~~~----------- 151 (513)
T 4gde_A 87 DDWYTHQRISYVRCQGQWVPYP-FQNNISMLPKEEQVK---CIDGMIDAALEARVANTKPKTFDEWIVR----------- 151 (513)
T ss_dssp GGEEEEECCEEEEETTEEEESS-GGGGGGGSCHHHHHH---HHHHHHHHHHHHHTCCSCCCSHHHHHHH-----------
T ss_pred ceeEEecCceEEEECCeEeecc-hhhhhhhcchhhHHH---HHHHHHHHHHhhhcccccccCHHHHHHH-----------
Confidence 22222222222222211111 111112222222111 1222222223333445566788887764
Q ss_pred chHHHHHHHHHHH-HHhhhcCCcccccccccccccc---------------------ccC-CccccccChHHHHHHHhh-
Q 039105 182 GLAYEVLQWYICR-MEAWFAVDADMISLKCWDQEQV---------------------LSG-GHGLMVQGYDPVIKALSK- 237 (493)
Q Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~---------------------~~~-g~~~~~~G~~~l~~~L~~- 237 (493)
.+.+++.+.++.+ ..+.++.+++++++.+...... ... ..+.+++|++.++++|++
T Consensus 152 ~~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~ 231 (513)
T 4gde_A 152 MMGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPARGGTGGIWIAVANT 231 (513)
T ss_dssp HHHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEESSSHHHHHHHHHHHT
T ss_pred hhhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecccCCHHHHHHHHHHH
Confidence 3666777777776 4567888888887764331100 000 112357899999999865
Q ss_pred ----cCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEE
Q 039105 238 ----DIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIAL 313 (493)
Q Consensus 238 ----gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l 313 (493)
|++|++|++|++|..++++ +++.+|++++||+||+|+|+..+.+++. ++........+.|.+...+.+
T Consensus 232 l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~~l~~~l~------~~~~~~~~~~l~y~~~~~v~l 303 (513)
T 4gde_A 232 LPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVDFLAEAMN------DQELVGLTKQLFYSSTHVIGV 303 (513)
T ss_dssp SCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHHHHHHHTT------CHHHHHHHTTCCEEEEEEEEE
T ss_pred HHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHHHHHHhcC------chhhHhhhhcccCCceEEEEE
Confidence 6689999999999987764 5578999999999999999999865331 234456667888888778887
Q ss_pred EcCCCCCCC-CCcceeecCCC-C---ceee--------------------eecc----ccCCCCcEEEEEecchhhHHhh
Q 039105 314 RFDNVFWPN-VELLGVVAPTS-Y---ACGY--------------------FLNL----HKATGHPVLVYMAAGRFAYDLE 364 (493)
Q Consensus 314 ~~~~~~~~~-~~~~g~~~~~~-~---~~~~--------------------~~~~----~~~~~~~~l~~~~~~~~~~~~~ 364 (493)
.++...... ....+...++. . .... +.+. ..+.+...++++..+.....+.
T Consensus 304 ~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (513)
T 4gde_A 304 GVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMK 383 (513)
T ss_dssp EEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTB
T ss_pred EEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCcceEEEEEecccchhcc
Confidence 775433211 01111111110 0 0000 1000 1112222334443333345677
Q ss_pred cCCHHHHHHHHHHHHHHhCCCCCC--CcEEEEcccCCCCCCCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCc-
Q 039105 365 KLSDESAANFVMMQLKKMFPDATE--PVQYLVSRWGTDPNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQ- 441 (493)
Q Consensus 365 ~~~~~e~~~~~~~~L~~~~p~~~~--~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~- 441 (493)
.++++++++.++++|.++.+-... ++...+.+|.+ .++.|...........++.+.. +|||++|....+.|.
T Consensus 384 ~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~---ayP~y~~~~~~~~~~~~~~l~~--~~l~~~GR~g~~~Y~~ 458 (513)
T 4gde_A 384 PVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDH---GYPTPTLEREGTLTQILPKLQD--KDIWSRGRFGSWRYEV 458 (513)
T ss_dssp CCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEE---EEECCBTTHHHHHHHHHHHHHH--TTEEECSTTTTCCGGG
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCC---eecccCHhHHHHHHHHHHHHhh--cCcEEecCCcccCcCC
Confidence 889999999999999998754332 34556777753 2333321111112234444544 599999998877765
Q ss_pred chhHHHHHHHHHHHHHHHH
Q 039105 442 GSVHGAYSAGVMAAQNCQK 460 (493)
Q Consensus 442 g~~egA~~sg~~aa~~i~~ 460 (493)
++|++|+++|++||+.|+.
T Consensus 459 ~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 459 GNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp CSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHc
Confidence 5899999999999999985
No 19
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=100.00 E-value=9.7e-35 Score=295.10 Aligned_cols=398 Identities=23% Similarity=0.220 Sum_probs=263.5
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCCCCCceeeccCC-CCceeecccceeeCCC-CCCchHHHHHHhCCc
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF--KVVLLESRDRLGGRIHTDYS-FGCPVDMGASWLHGVC-NENPLAPLIRRLGLT 103 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~~~GG~~~s~~~-~g~~~d~G~~~~~~~~-~~~~~~~l~~~lg~~ 103 (493)
++||+|||||++||+||++|+++|+ +|+|||+++++||++++... +|+.+|.|++++.... .+..+.++++++|++
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~~g~~~d~G~~~~~~~~~~~~~~~~l~~~lgl~ 81 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPRGIRPAGALGARTLLLVSELGLD 81 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECTTSCEEESSCCCBCCCHHHHHHHHHHHHHTTCG
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEeccCCeEEEeCCCcccCCCcccHHHHHHHHHcCCc
Confidence 4799999999999999999999999 99999999999999999654 5999999999875311 134578999999997
Q ss_pred e--eeeCCC-----CcccccCCccceeeecCCC-------ccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHH
Q 039105 104 L--YRTSGD-----NSVLYDHDLESYALYDMDG-------NKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAIS 169 (493)
Q Consensus 104 ~--~~~~~~-----~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 169 (493)
. ...... ..+.+..+.. .. +.... ..+.... +......... .....++.++.+++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~g~~-~~-~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~s~~~~~~ 151 (477)
T 3nks_A 82 SEVLPVRGDHPAAQNRFLYVGGAL-HA-LPTGLRGLLRPSPPFSKPL-------FWAGLRELTK-PRGKEPDETVHSFAQ 151 (477)
T ss_dssp GGEEEECTTSHHHHCEEEEETTEE-EE-CCCSSCC---CCTTSCSCS-------SHHHHTTTTS-CCCCSSCCBHHHHHH
T ss_pred ceeeecCCCCchhcceEEEECCEE-EE-CCCChhhcccccchhhhHH-------HHHHHHhhhc-CCCCCCCcCHHHHHH
Confidence 3 222111 1122211110 00 00000 0000000 0000000000 112335678888776
Q ss_pred HHHhcChhhhhhchHHHHHHHHHHH-HHhhhcCCccccccccccccc---------------------------------
Q 039105 170 IVLDRHPELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQEQ--------------------------------- 215 (493)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~--------------------------------- 215 (493)
. .+..++.+.++.+ ..+.++.+++++|+.......
T Consensus 152 ~-----------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~~ 220 (477)
T 3nks_A 152 R-----------RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQAL 220 (477)
T ss_dssp H-----------HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHHH
T ss_pred H-----------hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhhc
Confidence 4 3455666666665 456788888888766542110
Q ss_pred cccCCccccccChHHHHHHHhh-----cCCccccceeEEEEecCCc-EEEEEcCCcEEEcCEEEEecChhhhhcCccccc
Q 039105 216 VLSGGHGLMVQGYDPVIKALSK-----DIDIRLNQRVTKISNGCNK-VMVTVEDGRNFVADAAIVTVPLGILKANLIQFE 289 (493)
Q Consensus 216 ~~~~g~~~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~ 289 (493)
.-..+.+.+.+|++.++++|.+ |++|++|++|++|+.++++ +.|++. +.+++||+||+|+|+..+.+++
T Consensus 221 ~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~~-~~~~~ad~vv~a~p~~~~~~ll---- 295 (477)
T 3nks_A 221 AERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLR-DSSLEADHVISAIPASVLSELL---- 295 (477)
T ss_dssp HTTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEECS-SCEEEESEEEECSCHHHHHHHS----
T ss_pred ccCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEEC-CeEEEcCEEEECCCHHHHHHhc----
Confidence 0012456788999999988865 7899999999999987776 888774 4479999999999999876542
Q ss_pred CCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCCC---Ccee-eeecc-----ccCCCCcEEEEEecchhh
Q 039105 290 PKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTS---YACG-YFLNL-----HKATGHPVLVYMAAGRFA 360 (493)
Q Consensus 290 ~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~---~~~~-~~~~~-----~~~~~~~~l~~~~~~~~~ 360 (493)
+++++...+.+..+.+.+..++.+.|+.++|+...+ |++.+.. .... .|++. ..+.+..++++++.+...
T Consensus 296 ~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~-g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~gg~~~ 374 (477)
T 3nks_A 296 PAEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGF-GHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWL 374 (477)
T ss_dssp CGGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSS-EEECCTTTCSSEEEEECHHHHCGGGSTTTTCEEEEEEECHHHH
T ss_pred cccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCc-eEEccCCCCCCceEEEEeccccCCCCCCCCceEEEEEECCccc
Confidence 334456677888899988889999999999975544 6665432 1112 22221 112366788888877655
Q ss_pred HHhh----cCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccCCCCCCCh---hHHHHhhCccCceEEee
Q 039105 361 YDLE----KLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSYDVVGMPG---DLYERLRAPLGNLFFGG 433 (493)
Q Consensus 361 ~~~~----~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~aG 433 (493)
..+. ..+++++++.++++|+++++...+|....+++|.. ..+.| .+++.. .....+....+||++||
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~---a~p~~---~~g~~~~~~~~~~~l~~~~~~l~l~G 448 (477)
T 3nks_A 375 QTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKN---CIPQY---TLGHWQKLESARQFLTAHRLPLTLAG 448 (477)
T ss_dssp HHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEE---EEECC---BTTHHHHHHHHHHHHHHTTCSEEECS
T ss_pred cccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCC---ccCCC---CCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 4443 46899999999999999997666787777888864 11222 233321 12222333346999999
Q ss_pred ccccCcCcchhHHHHHHHHHHHHHHHHH
Q 039105 434 EAVSMEHQGSVHGAYSAGVMAAQNCQKY 461 (493)
Q Consensus 434 d~~~~~~~g~~egA~~sg~~aa~~i~~~ 461 (493)
|++.. .++++|+.||+++|++|+..
T Consensus 449 ~~~~G---~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 449 ASYEG---VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp TTTSC---CSHHHHHHHHHHHHHHHHHC
T ss_pred cCCCC---CcHHHHHHHHHHHHHHHHhc
Confidence 99632 47999999999999998763
No 20
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=280.61 Aligned_cols=322 Identities=18% Similarity=0.280 Sum_probs=231.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHh---CCCcEEEEeeCCCCCceeeccCC---CCceeecccceeeCCCCCC---chHHHHH
Q 039105 28 LPSVIVIGGGISGLAAARILYD---ASFKVVLLESRDRLGGRIHTDYS---FGCPVDMGASWLHGVCNEN---PLAPLIR 98 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~---~G~~V~v~E~~~~~GG~~~s~~~---~g~~~d~G~~~~~~~~~~~---~~~~l~~ 98 (493)
++||+|||||++||+||+.|++ +|++|+||||+..+||++.+... .+..+|.|..++... .. .+.++++
T Consensus 1 m~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~--~~~~~~~~~~~~ 78 (342)
T 3qj4_A 1 MAQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCT--PHYAKKHQRFYD 78 (342)
T ss_dssp CEEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEEC--SSHHHHTHHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcC--chHHHHHHHHHH
Confidence 4699999999999999999999 99999999999999999877543 345778777766421 11 0001111
Q ss_pred HhCCceeeeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhh
Q 039105 99 RLGLTLYRTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPEL 178 (493)
Q Consensus 99 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 178 (493)
++ .. .
T Consensus 79 ~~---------------------------------------------------~~---~--------------------- 83 (342)
T 3qj4_A 79 EL---------------------------------------------------LA---Y--------------------- 83 (342)
T ss_dssp HH---------------------------------------------------HH---T---------------------
T ss_pred HH---------------------------------------------------Hh---C---------------------
Confidence 00 00 0
Q ss_pred hhhchHHHHHHHHHHHHHhhhcCCccccccccccccccccCCccccccChHHHHHHHhh--cCCccccceeEEEEecCCc
Q 039105 179 RQEGLAYEVLQWYICRMEAWFAVDADMISLKCWDQEQVLSGGHGLMVQGYDPVIKALSK--DIDIRLNQRVTKISNGCNK 256 (493)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~g~~~~~~G~~~l~~~L~~--gv~i~~~~~V~~I~~~~~~ 256 (493)
+. ...+ ..... . ....-....+...+|+..++++|.+ |++|+++++|++|+.++++
T Consensus 84 ---g~-----------~~~~-~~~~~--~-----~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~ 141 (342)
T 3qj4_A 84 ---GV-----------LRPL-SSPIE--G-----MVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDK 141 (342)
T ss_dssp ---TS-----------CEEC-CSCEE--T-----CCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSS
T ss_pred ---CC-----------eecC-chhhc--c-----eeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCE
Confidence 00 0000 00000 0 0000011234567889999999887 8999999999999998889
Q ss_pred EEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCCCCce
Q 039105 257 VMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYAC 336 (493)
Q Consensus 257 v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~ 336 (493)
+.|++.+|++++||.||+|+|++.+.+++..+.|.+|+...+.+..+.|.+..++++.|+.++|.+..+.|...++....
T Consensus 142 ~~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~ 221 (342)
T 3qj4_A 142 WEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCI 221 (342)
T ss_dssp EEEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSE
T ss_pred EEEEECCCCEEEcCEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcce
Confidence 99999999889999999999999987755445566788888999999999999999999998888777888877654433
Q ss_pred eee-eccccCC-----CCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccC-
Q 039105 337 GYF-LNLHKAT-----GHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSY- 409 (493)
Q Consensus 337 ~~~-~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~- 409 (493)
.+. .+..+++ +...++++..+.+..++.+.+++++.+.++++|+++++...+|....+++|.... +.|..
T Consensus 222 ~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~---p~~~~~ 298 (342)
T 3qj4_A 222 RFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQ---VTNAAA 298 (342)
T ss_dssp EEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCS---BSSCCS
T ss_pred EEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccCCCCCceeeeccccccc---cccccC
Confidence 332 2333332 3457788888877888899999999999999999999988889988999997532 22211
Q ss_pred CCCCCChhHHHHhh-CccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHH
Q 039105 410 DVVGMPGDLYERLR-APLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKY 461 (493)
Q Consensus 410 ~~~~~~~~~~~~~~-~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~ 461 (493)
..++. +. .+.++|++||||+. .+++|+|+.||.+||++|++.
T Consensus 299 ~~~~~-------~~~~~~~~l~laGd~~~---g~~v~~ai~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 299 NCPGQ-------MTLHHKPFLACGGDGFT---QSNFDGCITSALCVLEALKNY 341 (342)
T ss_dssp SSCSC-------EEEETTTEEEECSGGGS---CSSHHHHHHHHHHHHHHHTTC
T ss_pred CCcce-------eEecCCccEEEEccccC---CCCccHHHHHHHHHHHHHHhh
Confidence 01111 11 35689999999974 369999999999999988754
No 21
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=100.00 E-value=1.2e-34 Score=298.35 Aligned_cols=244 Identities=16% Similarity=0.165 Sum_probs=178.9
Q ss_pred CccccccChHHHHHHHhh----cCCccccceeE--EEEecCCc-------EEE-EEcCCc--EEEcCEEEEecChhhhhc
Q 039105 220 GHGLMVQGYDPVIKALSK----DIDIRLNQRVT--KISNGCNK-------VMV-TVEDGR--NFVADAAIVTVPLGILKA 283 (493)
Q Consensus 220 g~~~~~~G~~~l~~~L~~----gv~i~~~~~V~--~I~~~~~~-------v~V-~~~~G~--~~~ad~VI~a~~~~~l~~ 283 (493)
..+.+.+|++.++++|.+ |..|+++++|+ +|..++++ |+| .+.+|+ +++||+||+|+|+..+..
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L~~ 417 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQLTP 417 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHHHH
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHHhh
Confidence 356789999999998865 56799999999 99876443 888 556777 789999999999998842
Q ss_pred ----Cccc-------c--------------cCC-C-c-------HHHHHHHhhcCCCceeEEEEEc-----CCCCCCCCC
Q 039105 284 ----NLIQ-------F--------------EPK-L-P-------EWKLSAIADIGVGNENKIALRF-----DNVFWPNVE 324 (493)
Q Consensus 284 ----~~~~-------~--------------~~~-l-~-------~~~~~~~~~~~~~~~~~v~l~~-----~~~~~~~~~ 324 (493)
..+. + .|+ | | ....+++.+++|....|+++.| +.+||.+..
T Consensus 418 ~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~ 497 (721)
T 3ayj_A 418 IVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWR 497 (721)
T ss_dssp HHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEET
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccC
Confidence 1233 2 344 5 8 8889999999999999999999 999998651
Q ss_pred --ccee-ecCCCCceeee-e-----ccccCCCCcEEEEEecchhhHHh------hcCCHHHH-------HHHHHHHHH--
Q 039105 325 --LLGV-VAPTSYACGYF-L-----NLHKATGHPVLVYMAAGRFAYDL------EKLSDESA-------ANFVMMQLK-- 380 (493)
Q Consensus 325 --~~g~-~~~~~~~~~~~-~-----~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~e~-------~~~~~~~L~-- 380 (493)
..+. +.+......++ + ++..+....+|..|++++.+..+ ..+++++. ++.++++|+
T Consensus 498 g~~i~~s~TD~~~r~~~~~p~p~~~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~ 577 (721)
T 3ayj_A 498 GEPIKAVVSDSGLAASYVVPSPIVEDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRY 577 (721)
T ss_dssp TEECCEEEETTTTEEEEEEECSCC----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCE
T ss_pred CCCceeeecCCCcceEEEeccCcccccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhh
Confidence 1122 22333332333 2 22223333467788888877777 44554444 899999999
Q ss_pred HhCCCCC-----------C---CcEEEEcccCCCCCCCccccCCCCCCCh------hHH--HHhhCccCceEEeeccccC
Q 039105 381 KMFPDAT-----------E---PVQYLVSRWGTDPNTLGCYSYDVVGMPG------DLY--ERLRAPLGNLFFGGEAVSM 438 (493)
Q Consensus 381 ~~~p~~~-----------~---~~~~~~~~w~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~l~~aGd~~~~ 438 (493)
+++|+.. . +.+...+.|..+| +.|+|....|++.. .+. ..+..+.++||||||+++.
T Consensus 578 ~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dp-s~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S~ 656 (721)
T 3ayj_A 578 VKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNK-TAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYSH 656 (721)
T ss_dssp ECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGST-TSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGSS
T ss_pred ccCccccccccchhhhhhhhcccCceEEEeCCCCC-CCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhcc
Confidence 8888754 1 2345678999999 99999888888831 111 1234567899999999986
Q ss_pred cCcchhHHHHHHHHHHHHHHHHHHHhC
Q 039105 439 EHQGSVHGAYSAGVMAAQNCQKYLLKQ 465 (493)
Q Consensus 439 ~~~g~~egA~~sg~~aa~~i~~~l~~~ 465 (493)
+.||+|||++||.+||..|...+...
T Consensus 657 -~~GWieGAl~Sa~~Aa~~i~~~~~~~ 682 (721)
T 3ayj_A 657 -LGGWLEGAFMSALNAVAGLIVRANRG 682 (721)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -CCceehHHHHHHHHHHHHHHHHhcCC
Confidence 56999999999999999999988664
No 22
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=100.00 E-value=6.5e-33 Score=276.90 Aligned_cols=397 Identities=18% Similarity=0.171 Sum_probs=246.4
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCceee--
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLYR-- 106 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~-- 106 (493)
+||+|||||++||+||++|+++|++|+|+||++++||++++...+|+.+|.|++++........+.++++++|+....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~~ 80 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYKGFQLSTGALHMIPHGEDGPLAHLLRILGAKVEIVN 80 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEETTEEEESSSCSEETTTTSSHHHHHHHHHTCCCCEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccCCEEEecCCeEEEccCCChHHHHHHHHhCCcceEEE
Confidence 489999999999999999999999999999999999999999999999999987765444456789999999986322
Q ss_pred eCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhhhhhchHHH
Q 039105 107 TSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPELRQEGLAYE 186 (493)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 186 (493)
......+.+++. .. .+......+...... .+..+....... ....++.++.+++... ++..+
T Consensus 81 ~~~~~~~~~~g~--~~-~~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~~~~~~s~~~~l~~~----------g~~~~ 142 (421)
T 3nrn_A 81 SNPKGKILWEGK--IF-HYRESWKFLSVKEKA----KALKLLAEIRMN-KLPKEEIPADEWIKEK----------IGENE 142 (421)
T ss_dssp CSSSCEEEETTE--EE-EGGGGGGGCC------------CCHHHHHTT-CCCCCCSBHHHHHHHH----------TCCCH
T ss_pred CCCCeEEEECCE--EE-EcCCchhhCCHhHHH----HHHHHHHHHHhc-cCCCCCCCHHHHHHHh----------cCCcH
Confidence 222222222111 00 000001111111100 111111111110 1222346777777643 23344
Q ss_pred HHHHHHHHH-HhhhcCCccccccccccc---cccccCCccccccChHHHHHHHhh-----cCCccccceeEEEEecCCcE
Q 039105 187 VLQWYICRM-EAWFAVDADMISLKCWDQ---EQVLSGGHGLMVQGYDPVIKALSK-----DIDIRLNQRVTKISNGCNKV 257 (493)
Q Consensus 187 ~~~~~~~~~-~~~~~~~~~~~s~~~~~~---~~~~~~g~~~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I~~~~~~v 257 (493)
.++.++.+. ...++.++.++++..... .....++..++.+|+..++++|.+ |++|++|++|++|..+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v 222 (421)
T 3nrn_A 143 FLLSVLESFAGWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV 222 (421)
T ss_dssp HHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE
T ss_pred HHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE
Confidence 445544443 345677777777643321 112346678899999999988864 88999999999999988888
Q ss_pred EEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCCCC-c-
Q 039105 258 MVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSY-A- 335 (493)
Q Consensus 258 ~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~-~- 335 (493)
| +.+|++++||.||+|+++..+.+++ . .+.+|+...+.+..+.+.+..++.+.++.+...... .++.++.. .
T Consensus 223 -V-~~~g~~~~ad~Vv~a~~~~~~~~ll-~-~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~--~~~~~~~~~~~ 296 (421)
T 3nrn_A 223 -Y-TRDNEEYSFDVAISNVGVRETVKLI-G-RDYFDRDYLKQVDSIEPSEGIKFNLAVPGEPRIGNT--IVFTPGLMING 296 (421)
T ss_dssp -E-ETTCCEEECSEEEECSCHHHHHHHH-C-GGGSCHHHHHHHHTCCCCCEEEEEEEEESSCSSCSS--EEECTTSSSCE
T ss_pred -E-EeCCcEEEeCEEEECCCHHHHHHhc-C-cccCCHHHHHHHhCCCCCceEEEEEEEcCCcccCCe--EEEcCCcceee
Confidence 6 4577789999999999999876532 2 134677777788889888777888888876433211 11111110 0
Q ss_pred ee---eeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCccccCCCC
Q 039105 336 CG---YFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTDPNTLGCYSYDVV 412 (493)
Q Consensus 336 ~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 412 (493)
.. ..+....|.|+.++.++..- ...++++.++.++++|++++| ..++ ..+.+|... .+.+. ..+
T Consensus 297 i~~~s~~~p~~ap~G~~~~~~~~~~------~~~~~~~~~~~~~~~L~~~~p-~~~~--~~~~~~~~~---~p~~~-~~~ 363 (421)
T 3nrn_A 297 FNEPSALDKSLAREGYTLIMAHMAL------KNGNVKKAIEKGWEELLEIFP-EGEP--LLAQVYRDG---NPVNR-TRA 363 (421)
T ss_dssp EECGGGTCGGGSCTTEEEEEEEEEC------TTCCHHHHHHHHHHHHHHHCT-TCEE--EEEEEC---------------
T ss_pred EeccCCCCCCcCCCCceEEEEEEee------ccccHHHHHHHHHHHHHHHcC-CCeE--EEeeeccCC---CCccc-ccC
Confidence 11 11122345666666554422 122334668999999999999 3333 345667531 11121 111
Q ss_pred CCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHhCCCCcccccc
Q 039105 413 GMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQPGNLEKLQL 474 (493)
Q Consensus 413 ~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~~~~~~~~~~~ 474 (493)
+. .. + .++ +|||+|||++.+.+.-.+|||+.||++||++| +.+.-..|-.
T Consensus 364 ~~--~~-~--~~~-~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l------~~~~~~~~~~ 413 (421)
T 3nrn_A 364 GL--HI-E--WPL-NEVLVVGDGYRPPGGIEVDGIALGVMKALEKL------NLGSFSEWYL 413 (421)
T ss_dssp ----CC-C--CCC-SSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT------TSCCCCTTTC
T ss_pred CC--CC-C--CCC-CcEEEECCcccCCCceeeehHHHHHHHHHHHh------CcCchhhhhh
Confidence 11 11 1 567 99999999987532226699999999999987 6666555543
No 23
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=100.00 E-value=1.5e-32 Score=277.64 Aligned_cols=402 Identities=13% Similarity=0.117 Sum_probs=261.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCCCCCceeecc-CCCCceeecccceeeCCCCCCchHHHHHHhCCc
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDAS-FKVVLLESRDRLGGRIHTD-YSFGCPVDMGASWLHGVCNENPLAPLIRRLGLT 103 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~~~GG~~~s~-~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (493)
.+++||+|||||++||+||++|+++| .+|+|+|+++++||++++. ..+|+.+|.|++++.. .+..+.++++++..+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~l~~~~~~~ 84 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWDLGGHVIFS--HYQYFDDVMDWAVQG 84 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEESSCCCBCC--SBHHHHHHHHHHCSC
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEeeCCccccc--ChHHHHHHHHHHhhh
Confidence 35789999999999999999999998 7999999999999999995 6789999999998863 445678999997633
Q ss_pred eeeeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhhhhhch
Q 039105 104 LYRTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPELRQEGL 183 (493)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 183 (493)
.........+.+++....++ +......++...... .+..+... +.+....++.++.+|+.+. +
T Consensus 85 ~~~~~~~~~~~~~g~~~~~P-~~~~~~~l~~~~~~~---~~~~ll~~--~~~~~~~~~~s~~e~~~~~-----------~ 147 (484)
T 4dsg_A 85 WNVLQRESWVWVRGRWVPYP-FQNNIHRLPEQDRKR---CLDELVRS--HARTYTEPPNNFEESFTRQ-----------F 147 (484)
T ss_dssp EEEEECCCEEEETTEEEESS-GGGCGGGSCHHHHHH---HHHHHHHH--HHCCCSSCCSSHHHHHHHH-----------H
T ss_pred hhhccCceEEEECCEEEEeC-ccchhhhCCHHHHHH---HHHHHHHH--HhccCCCCCCCHHHHHHHH-----------h
Confidence 33222222222222111111 011112223222111 11122211 1223345678898887753 5
Q ss_pred HHHHHHHHHHHH-HhhhcCCcccccccccccccc-----------c----------cCCcccc-ccChHHHHHHHhhcC-
Q 039105 184 AYEVLQWYICRM-EAWFAVDADMISLKCWDQEQV-----------L----------SGGHGLM-VQGYDPVIKALSKDI- 239 (493)
Q Consensus 184 ~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~~~-----------~----------~~g~~~~-~~G~~~l~~~L~~gv- 239 (493)
++++.+.++.++ .+.++.+++++|+.+...... + .+...++ .+|++.++++|++.+
T Consensus 148 g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~gG~~~l~~~la~~l~ 227 (484)
T 4dsg_A 148 GEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQRGGTGIIYQAIKEKLP 227 (484)
T ss_dssp HHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESSSCTHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecCCCHHHHHHHHHhhhh
Confidence 566666666664 568889999988865331110 0 1112234 489999999999866
Q ss_pred --Ccccc--ceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEc
Q 039105 240 --DIRLN--QRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRF 315 (493)
Q Consensus 240 --~i~~~--~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~ 315 (493)
+|+++ ++|++|..+++++ ++.+|++++||+||+|+|+..+.+++....+++|+...+.+..+.|.+..++.+.|
T Consensus 228 ~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~ 305 (484)
T 4dsg_A 228 SEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGV 305 (484)
T ss_dssp GGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEE
T ss_pred hCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEE
Confidence 79999 5699999887755 45788899999999999999987644333345777888888999999888999999
Q ss_pred CCCCCCC-CCcceeecCCC----Cceeeeec---cccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCC
Q 039105 316 DNVFWPN-VELLGVVAPTS----YACGYFLN---LHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDAT 387 (493)
Q Consensus 316 ~~~~~~~-~~~~g~~~~~~----~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~ 387 (493)
+.+...+ ....++..++. ...+.+.+ ...|.++..+...++.. ..+..+++++++.+.++|.++..-..
T Consensus 306 ~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~~l~~e~~~~---~~~~~~d~~l~~~a~~~L~~~~~~~~ 382 (484)
T 4dsg_A 306 KGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHWSLMLEVSES---KYKPVNHSTLIEDCIVGCLASNLLLP 382 (484)
T ss_dssp ESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEEEEEEEEEEB---TTBCCCTTSHHHHHHHHHHHTTSCCT
T ss_pred cCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeEEEEEEEecC---cCCcCCHHHHHHHHHHHHHHcCCCCc
Confidence 8753211 12344444432 11222222 22355666665555432 35567899999999999999853211
Q ss_pred -CCc-EEEEcccCCCCCCCccccCCCCCCC---hhHHHHhhCccCceEEeeccccCcCc-chhHHHHHHHHHHHHHHH
Q 039105 388 -EPV-QYLVSRWGTDPNTLGCYSYDVVGMP---GDLYERLRAPLGNLFFGGEAVSMEHQ-GSVHGAYSAGVMAAQNCQ 459 (493)
Q Consensus 388 -~~~-~~~~~~w~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~aGd~~~~~~~-g~~egA~~sg~~aa~~i~ 459 (493)
+++ ...+.+|.. .++.|. +++. ...++.+.. . ||+++|++..+.|. +++++|+.||++||++|+
T Consensus 383 ~~~~~~~~v~r~~~---~yP~y~---~~~~~~~~~~~~~l~~-~-~l~~~Gr~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 383 EDLLVSKWHYRIEK---GYPTPF---IGRNNLLEKAQPELMS-R-CIYSRGRFGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TCCEEEEEEEEEEE---EEECCB---TTHHHHHHHHHHHHHH-T-TEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred cceEEEEEEEEeCc---cccCCC---ccHHHHHHHHHHHHHh-C-CcEeecCCcccccCCCChHHHHHHHHHHHHHHH
Confidence 233 234667753 222222 3322 233444443 3 99999997766543 479999999999999886
No 24
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.97 E-value=7.2e-30 Score=255.16 Aligned_cols=391 Identities=15% Similarity=0.136 Sum_probs=225.7
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCce
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDAS-FKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTL 104 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (493)
.+++||+|||||++||+||++|+++| ++|+|+|+++++||+++|....|+.+|.|++++.. .+..+.++++++|++.
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~--~~~~~~~l~~~~g~~~ 81 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVP--SYDTIQEIMDRTGDKV 81 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEETTEECCSSCCCBCT--TCHHHHHHHHHHCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCCCcccccCceeecC--CcHHHHHHHHHhCCcc
Confidence 46789999999999999999999999 99999999999999999988899999999998863 4567899999999875
Q ss_pred eeeCCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhc-----------CCCCCCHHHHHHHHHh
Q 039105 105 YRTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDE-----------HTNDMSVLQAISIVLD 173 (493)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~s~~~~~~~~~~ 173 (493)
........+.+.++.. .. ...... .. ......+.++.......... .....++.+++...
T Consensus 82 ~~~~~~~~~~~~~g~~---~~-~~~~~~--~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~-- 152 (424)
T 2b9w_A 82 DGPKLRREFLHEDGEI---YV-PEKDPV--RG-PQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALN-- 152 (424)
T ss_dssp CSCCCCEEEECTTSCE---EC-GGGCTT--HH-HHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHT--
T ss_pred ccccccceeEcCCCCE---ec-cccCcc--cc-hhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhh--
Confidence 4322222222221110 00 000001 10 01111222222222111000 11135666666542
Q ss_pred cChhhhhhchHHHHHHHHHHHHH-hhhcCCcccccccccccc-------ccccCCccccccChHHHHHHHhhc--CCccc
Q 039105 174 RHPELRQEGLAYEVLQWYICRME-AWFAVDADMISLKCWDQE-------QVLSGGHGLMVQGYDPVIKALSKD--IDIRL 243 (493)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~-------~~~~~g~~~~~~G~~~l~~~L~~g--v~i~~ 243 (493)
++. .+.+.+..++. ..++ ++.+.++..+... ....++.+.+.+|++.++++|.+. .+|++
T Consensus 153 --------~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~v~~ 222 (424)
T 2b9w_A 153 --------GCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAER 222 (424)
T ss_dssp --------TCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSSSCCBC
T ss_pred --------CcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHHHHHHHhhcceEEc
Confidence 121 12233333322 1222 3344444322110 112345667889999999999874 47999
Q ss_pred cceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCC
Q 039105 244 NQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNV 323 (493)
Q Consensus 244 ~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~ 323 (493)
|++|++|..+++++.|++.+|+ ++||+||+|+|+..+.. +.+++|.. ++.+..+.+.... +.+.+...+.
T Consensus 223 ~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~~~~~----~l~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~--- 292 (424)
T 2b9w_A 223 NVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLEKFLD----YSDADDDE-REYFSKIIHQQYM-VDACLVKEYP--- 292 (424)
T ss_dssp SCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHHHHTT----SBCCCHHH-HHHHTTCEEEEEE-EEEEEESSCC---
T ss_pred CCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHHHHhh----ccCCCHHH-HHHHhcCCcceeE-EEEEEeccCC---
Confidence 9999999998888999998884 99999999999987643 23444443 3445555554332 2222221221
Q ss_pred CcceeecCCC-----C-ceeeeeccccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEccc
Q 039105 324 ELLGVVAPTS-----Y-ACGYFLNLHKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRW 397 (493)
Q Consensus 324 ~~~g~~~~~~-----~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w 397 (493)
.+.++ .+.. . ...+......++....++++..+.. ..+...+++++++.++++|.++.+...++ .....|
T Consensus 293 ~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~v~~~l~~l~~~~~~~--~~~~~w 368 (424)
T 2b9w_A 293 TISGY-VPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNH-PDYADKTQEECRQMVLDDMETFGHPVEKI--IEEQTW 368 (424)
T ss_dssp SSEEE-CGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCB-TTBCCCCHHHHHHHHHHHHHHTTCCEEEE--EEEEEE
T ss_pred ccccc-ccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCC-CcccccChHHHHHHHHHHHHHcCCccccc--ccccce
Confidence 11122 1111 0 0111111111223345666654432 34566788899999999999954421111 122355
Q ss_pred CCCCC-CCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHH
Q 039105 398 GTDPN-TLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQ 459 (493)
Q Consensus 398 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~ 459 (493)
...+. ....+. .+. ..+....++.+|+|+||++++ .|++|+|+.||.++|++++
T Consensus 369 ~~~p~~~~~~~~---~G~--~~~~~~~~~~~~l~~aG~~~~---~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 369 YYFPHVSSEDYK---AGW--YEKVEGMQGRRNTFYAGEIMS---FGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp EEEEECCHHHHH---TTH--HHHHHHTTTGGGEEECSGGGS---CSSHHHHHHHHHHHHHHHT
T ss_pred eeeeccCHHHHh---ccH--HHHHHHHhCCCCceEeccccc---cccHHHHHHHHHHHHHHhc
Confidence 42110 000010 011 112223455689999999864 4899999999999999874
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.96 E-value=4.5e-27 Score=227.39 Aligned_cols=321 Identities=19% Similarity=0.237 Sum_probs=214.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCceeee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLTLYRT 107 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 107 (493)
++||+|||||++||++|+.|+++|++|+|||++..+||++.+....+..+|.|..++.. ....+.++++++....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--- 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTA--RDRRFATAVKQWQAQG--- 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCC--CSHHHHHHHHHHHHHT---
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEec--CCHHHHHHHHHHHhCC---
Confidence 47999999999999999999999999999999999999998877777888888776642 1111222222211000
Q ss_pred CCCCcccccCCccceeeecCCCccccHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhhhhhchHHHH
Q 039105 108 SGDNSVLYDHDLESYALYDMDGNKVEKEMAIKVGEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPELRQEGLAYEV 187 (493)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 187 (493)
.. . .
T Consensus 77 ---------------------------------------------~~-~-------------------------~----- 80 (336)
T 1yvv_A 77 ---------------------------------------------HV-A-------------------------E----- 80 (336)
T ss_dssp ---------------------------------------------SE-E-------------------------E-----
T ss_pred ---------------------------------------------Ce-e-------------------------e-----
Confidence 00 0 0
Q ss_pred HHHHHHHHHhhhcCCccccccccccccccccCCccccccChHHHHHHHhhcCCccccceeEEEEecCCcEEEEEcCCcEE
Q 039105 188 LQWYICRMEAWFAVDADMISLKCWDQEQVLSGGHGLMVQGYDPVIKALSKDIDIRLNQRVTKISNGCNKVMVTVEDGRNF 267 (493)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~g~~~~~~G~~~l~~~L~~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~ 267 (493)
+ ...........+. ........+....++..+.+++.+|++|+++++|++|+.+++++.|++.+|+..
T Consensus 81 ----------~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 81 ----------W-TPLLYNFHAGRLS-PSPDEQVRWVGKPGMSAITRAMRGDMPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp ----------E-CCCEEEESSSBCC-CCCTTSCEEEESSCTHHHHHHHHTTCCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred ----------c-cccceeccCcccc-cCCCCCccEEcCccHHHHHHHHHccCcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 0 0000000000000 000001123345688999999999999999999999999888999999999866
Q ss_pred E-cCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCCCCceeee-eccccC
Q 039105 268 V-ADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYF-LNLHKA 345 (493)
Q Consensus 268 ~-ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~ 345 (493)
. ||+||+|+|++.+.+++ .+ . +.....+..+.|.+..++.+.|+.++|.... +...... ...++ .+...|
T Consensus 149 ~~a~~vV~a~g~~~~~~~~-~~---~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~l~~~~~~p 220 (336)
T 1yvv_A 149 GPFSHVIIATPAPQASTLL-AA---A-PKLASVVAGVKMDPTWAVALAFETPLQTPMQ--GCFVQDS-PLDWLARNRSKP 220 (336)
T ss_dssp EEESEEEECSCHHHHGGGG-TT---C-HHHHHHHTTCCEEEEEEEEEEESSCCSCCCC--EEEECSS-SEEEEEEGGGST
T ss_pred cccCEEEEcCCHHHHHHhh-cc---C-HHHHHHHhhcCccceeEEEEEecCCCCCCCC--eEEeCCC-ceeEEEecCcCC
Confidence 4 99999999999876632 22 2 3345677788888888899999988875432 2222222 22233 222223
Q ss_pred C--CC-cEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCC-CCCCcEEEEcccCCCCCCCccccCCCCCCChhHHHH
Q 039105 346 T--GH-PVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPD-ATEPVQYLVSRWGTDPNTLGCYSYDVVGMPGDLYER 421 (493)
Q Consensus 346 ~--~~-~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~-~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~ 421 (493)
. +. ..++.+..+.....+.+++++++.+++.+.+.++++. ...|......+|.. ..+.+.. +.. .
T Consensus 221 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~---a~~~~~~---~~~-----~ 289 (336)
T 1yvv_A 221 ERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLY---ARPAGAH---EWG-----A 289 (336)
T ss_dssp TCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEE---EEESSCC---CCS-----C
T ss_pred CCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCc---cCCCCCC---CCC-----e
Confidence 2 22 3567777766777888899999999999999999974 33566666788863 1111111 110 1
Q ss_pred hhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHH
Q 039105 422 LRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLL 463 (493)
Q Consensus 422 ~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~ 463 (493)
...+.++|++|||+++. +++++|+.||.++|+.|.+.+.
T Consensus 290 ~~~~~~rl~laGDa~~g---~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 290 LSDADLGIYVCGDWCLS---GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp EEETTTTEEECCGGGTT---SSHHHHHHHHHHHHHHHHHHTT
T ss_pred eecCCCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHhh
Confidence 22345899999999753 6999999999999999988643
No 26
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.94 E-value=1.4e-26 Score=228.33 Aligned_cols=248 Identities=14% Similarity=0.145 Sum_probs=157.4
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeeCCCCCceeeccCC--CCceee-cccceeeCCCCCCchHHHHHHh
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDA-SFKVVLLESRDRLGGRIHTDYS--FGCPVD-MGASWLHGVCNENPLAPLIRRL 100 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~-G~~V~v~E~~~~~GG~~~s~~~--~g~~~d-~G~~~~~~~~~~~~~~~l~~~l 100 (493)
|.+++||+|||||++||+||++|+++ |++|+|+|+++++||++++... .|+.+| .|+++++. .+..+.++++++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~~ 81 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHT--SNKRVWDYVRQF 81 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECTTTCCEEETTSCCCEEE--SCHHHHHHHTTT
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccccCCCEEEEeCCCcEEcC--CcHHHHHHHHHh
Confidence 45679999999999999999999999 9999999999999999999776 688884 99999884 467789999999
Q ss_pred CCceeeeCCCCcccccCCccceeeecCCCccccHHH--HHHHHHH---HHHHHHHHHHhhh--cCCCCCCHHHHHHHHHh
Q 039105 101 GLTLYRTSGDNSVLYDHDLESYALYDMDGNKVEKEM--AIKVGEI---FKRILNETQKVRD--EHTNDMSVLQAISIVLD 173 (493)
Q Consensus 101 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~ 173 (493)
|+- ........+.+++ ....+|... ...+... ..+.......... ...++.++.+++.+
T Consensus 82 g~~-~~~~~~~~~~~~G----------~~~~~p~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~e~l~~--- 147 (399)
T 1v0j_A 82 TDF-TDYRHRVFAMHNG----------QAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAIS--- 147 (399)
T ss_dssp CCB-CCCCCCEEEEETT----------EEEEESSSHHHHHHHHTSCCCHHHHHHHHHHHGGGSCTTC----CCHHHH---
T ss_pred hhh-hccccceEEEECC----------EEEeCCCCHHHHHHHhcccCCHHHHHHHHHHHhhccCCCCcccHHHHHHH---
Confidence 872 1111111111111 111111111 1111000 0011101111111 11234556665543
Q ss_pred cChhhhhhchHHHHHHHHHHHH-HhhhcCCccccccccccc---ccc-----ccCCc-cccccChHHHHHHHhh--cCCc
Q 039105 174 RHPELRQEGLAYEVLQWYICRM-EAWFAVDADMISLKCWDQ---EQV-----LSGGH-GLMVQGYDPVIKALSK--DIDI 241 (493)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~---~~~-----~~~g~-~~~~~G~~~l~~~L~~--gv~i 241 (493)
.+++++.+.++.++ ...++.+++++++..... ... +.... .++.+|+++++++|++ |++|
T Consensus 148 --------~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I 219 (399)
T 1v0j_A 148 --------LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEV 219 (399)
T ss_dssp --------HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHHHHHHHHHTCSTTEEE
T ss_pred --------HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccHHHHHHHHHhcCCeEE
Confidence 35667777777764 467888888888765421 111 11122 2889999999999986 5689
Q ss_pred cccceeEEEEecCCcEEEEEcCCcEE-EcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCC
Q 039105 242 RLNQRVTKISNGCNKVMVTVEDGRNF-VADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFW 320 (493)
Q Consensus 242 ~~~~~V~~I~~~~~~v~V~~~~G~~~-~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~ 320 (493)
++|++|++|... + + ++ +||+||+|+|+..+..+ .+..+.|.+...+.+.++.+.+
T Consensus 220 ~l~~~V~~I~~~---v-----~--~~~~aD~VI~t~p~~~l~~~--------------~l~~l~y~s~~~~~~~~~~~~~ 275 (399)
T 1v0j_A 220 RLNTDWFDVRGQ---L-----R--PGSPAAPVVYTGPLDRYFDY--------------AEGRLGWRTLDFEVEVLPIGDF 275 (399)
T ss_dssp ECSCCHHHHHHH---H-----T--TTSTTCCEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCS
T ss_pred EECCchhhhhhh---h-----h--hcccCCEEEECCcHHHHHhh--------------hhCCCCcceEEEEEEEEccccC
Confidence 999999999643 2 1 35 79999999999987542 1335677666667777766533
No 27
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.93 E-value=2.4e-25 Score=216.93 Aligned_cols=244 Identities=17% Similarity=0.180 Sum_probs=163.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceee-cccceeeCCCCCCchHHHHHHhCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVD-MGASWLHGVCNENPLAPLIRRLGLTLYR 106 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d-~G~~~~~~~~~~~~~~~l~~~lg~~~~~ 106 (493)
++||+|||||++||+||++|+++|++|+|+|+++++||++.+....|+.+| .|+++++. .+..+.+++++++.-. +
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~l~~~~-~ 77 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQIHKYGAHIFHT--NDKYIWDYVNDLVEFN-R 77 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEEETTSCCCEEE--SCHHHHHHHHTTSCBC-C
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCceeeccCCceecC--CCHHHHHHHHHhhhhh-h
Confidence 369999999999999999999999999999999999999999877899885 99999884 3456888898888532 1
Q ss_pred eCCCCcccccCCccceeeecCCCccccHH--HHHHH-----HHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcChhhh
Q 039105 107 TSGDNSVLYDHDLESYALYDMDGNKVEKE--MAIKV-----GEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHPELR 179 (493)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 179 (493)
........+++. ...+|.+ ....+ ...+.++....... ....++.++.+++..
T Consensus 78 ~~~~~~~~~~g~----------~~~~p~~~~~~~~l~~~~~~~~~~~~l~~~~~~-~~~~~~~s~~~~~~~--------- 137 (367)
T 1i8t_A 78 FTNSPLAIYKDK----------LFNLPFNMNTFHQMWGVKDPQEAQNIINAQKKK-YGDKVPENLEEQAIS--------- 137 (367)
T ss_dssp CCCCCEEEETTE----------EEESSBSHHHHHHHHCCCCHHHHHHHHHHHTTT-TCCCCCCSHHHHHHH---------
T ss_pred ccccceEEECCe----------EEEcCCCHHHHHHHhccCCHHHHHHHHHHHhhc-cCCCCCccHHHHHHH---------
Confidence 111111111111 1111111 11111 11112222211111 112356788887764
Q ss_pred hhchHHHHHHHHHHHH-HhhhcCCcccccccccccc---c-----cccCCc-cccccChHHHHHHHhhcCCccccceeEE
Q 039105 180 QEGLAYEVLQWYICRM-EAWFAVDADMISLKCWDQE---Q-----VLSGGH-GLMVQGYDPVIKALSKDIDIRLNQRVTK 249 (493)
Q Consensus 180 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~---~-----~~~~g~-~~~~~G~~~l~~~L~~gv~i~~~~~V~~ 249 (493)
.+++++.+.++.++ ...++.+++++++...... . .+.+.. .++++|+++++++|++|++|++|++|++
T Consensus 138 --~~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~g~~i~l~~~V~~ 215 (367)
T 1i8t_A 138 --LVGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGYTKLIEKMLEGVDVKLGIDFLK 215 (367)
T ss_dssp --HHHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCHHHHHHHHHTTSEEECSCCGGG
T ss_pred --HHhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCHHHHHHHHhcCCEEEeCCceee
Confidence 36778888888774 5688999999987655211 1 112222 2889999999999999999999999998
Q ss_pred EEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCC
Q 039105 250 ISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWP 321 (493)
Q Consensus 250 I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~ 321 (493)
|... + ++.||+||+|+|+..+... .+..+.|.+...+.+.++.+.++
T Consensus 216 i~~~---v--------~~~~D~VV~a~p~~~~~~~--------------~l~~l~y~s~~~v~~~~d~~~~~ 262 (367)
T 1i8t_A 216 DKDS---L--------ASKAHRIIYTGPIDQYFDY--------------RFGALEYRSLKFETERHEFPNFQ 262 (367)
T ss_dssp SHHH---H--------HTTEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCSS
T ss_pred echh---h--------hccCCEEEEeccHHHHHHH--------------hhCCCCCceEEEEEEEeccccCC
Confidence 8631 2 2468999999999886432 13456776666777777776543
No 28
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.92 E-value=4.3e-24 Score=209.21 Aligned_cols=234 Identities=12% Similarity=0.201 Sum_probs=157.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCC--CCcee-ecccceeeCCCCCCchHHHHHHhCCce
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYS--FGCPV-DMGASWLHGVCNENPLAPLIRRLGLTL 104 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~--~g~~~-d~G~~~~~~~~~~~~~~~l~~~lg~~~ 104 (493)
++||+|||||++||+||+.|+++|++|+|+|+++++||++++... .|+.+ |.|+|+++. .+..+.+++++++.-
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~~g~~~~~~G~~~~~~--~~~~~~~~~~~l~~~- 79 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDSETNVMVHVYGPHIFHT--DNETVWNYVNKHAEM- 79 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECTTTCCEEETTSCCCEEE--SCHHHHHHHHTTSCE-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccccCCCceEeeCCceEECC--CCHHHHHHHHHHhhh-
Confidence 479999999999999999999999999999999999999999776 78876 999999984 456789999999862
Q ss_pred eeeCCCCcccccCCccceeeecCCCccccHHH--HHHH------HHHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhcCh
Q 039105 105 YRTSGDNSVLYDHDLESYALYDMDGNKVEKEM--AIKV------GEIFKRILNETQKVRDEHTNDMSVLQAISIVLDRHP 176 (493)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 176 (493)
.+......+.+++.. ..+|... ...+ ...+.++..... .....++.++.+++..
T Consensus 80 ~~~~~~~~~~~~g~~----------~~~P~~~~~~~~l~~~~~~~~~~~~~l~~~~--~~~~~~~~sl~e~~~~------ 141 (384)
T 2bi7_A 80 MPYVNRVKATVNGQV----------FSLPINLHTINQFFSKTCSPDEARALIAEKG--DSTIADPQTFEEEALR------ 141 (384)
T ss_dssp EECCCCEEEEETTEE----------EEESCCHHHHHHHTTCCCCHHHHHHHHHHHS--CCSCSSCCBHHHHHHH------
T ss_pred cccccceEEEECCEE----------EECCCChhHHHHHhcccCCHHHHHHHHHHhh--hccCCCCcCHHHHHHH------
Confidence 221111111122110 1111110 0000 011111111111 1112356788887764
Q ss_pred hhhhhchHHHHHHHHHHH-HHhhhcCCccccccccccc--------cccccCCc-cccccChHHHHHHHhh--cCCcccc
Q 039105 177 ELRQEGLAYEVLQWYICR-MEAWFAVDADMISLKCWDQ--------EQVLSGGH-GLMVQGYDPVIKALSK--DIDIRLN 244 (493)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~--------~~~~~~g~-~~~~~G~~~l~~~L~~--gv~i~~~ 244 (493)
.+++++.+.++.+ ..+.++.+++++++..... ...+.+.. .++++|++.++++|++ |++|++|
T Consensus 142 -----~~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~~~l~~~l~~~~g~~I~l~ 216 (384)
T 2bi7_A 142 -----FIGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGYTQMIKSILNHENIKVDLQ 216 (384)
T ss_dssp -----HHCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHHHHHHHHHHCSTTEEEEES
T ss_pred -----hhcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCHHHHHHHHHhcCCCEEEEC
Confidence 2557777888776 4568899999998765420 11122333 2889999999999987 6789999
Q ss_pred ceeE-EEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcC
Q 039105 245 QRVT-KISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFD 316 (493)
Q Consensus 245 ~~V~-~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~ 316 (493)
++|+ +|.. .||+||+|+|+..+..+ .+..+.|.+...+.+.++
T Consensus 217 ~~V~~~i~~---------------~~d~VI~a~p~~~~~~~--------------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 217 REFIVEERT---------------HYDHVFYSGPLDAFYGY--------------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp CCCCGGGGG---------------GSSEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEEE
T ss_pred Ceeehhhhc---------------cCCEEEEcCCHHHHHHh--------------hcCCCCcceEEEEEEEeC
Confidence 9999 8863 29999999999987543 133567766666666665
No 29
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.91 E-value=3.6e-23 Score=201.18 Aligned_cols=340 Identities=11% Similarity=0.118 Sum_probs=207.8
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccC-CCCcee-ecccceeeCCCCCCchHHHHHHhCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDY-SFGCPV-DMGASWLHGVCNENPLAPLIRRLGL 102 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~-~~g~~~-d~G~~~~~~~~~~~~~~~l~~~lg~ 102 (493)
...++||+|||||++||+||++|+++|++|+|+|+++++||++.+.. ..|+.+ |.|+|.++. ....+.+++++++.
T Consensus 26 ~~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~~~~~G~~~~~~--~~~~~~~~~~~~~~ 103 (397)
T 3hdq_A 26 ESKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVLIHPYGPHIFHT--NSKDVFEYLSRFTE 103 (397)
T ss_dssp CCCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCEECTTSCCCCEE--SCHHHHHHHHTSCC
T ss_pred cCCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCceEeecCCcccCC--ChHHHHHHHHHhhh
Confidence 45679999999999999999999999999999999999999999865 678875 999999873 46678999999985
Q ss_pred ceeeeCCCCcccccCCccceeeecCCCccccHHH--HHHHH------HHHHHHHHHHHHhhhcCCCCCCHHHHHHHHHhc
Q 039105 103 TLYRTSGDNSVLYDHDLESYALYDMDGNKVEKEM--AIKVG------EIFKRILNETQKVRDEHTNDMSVLQAISIVLDR 174 (493)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 174 (493)
.. + .......+.++ ....+|... ...+. .....+.. .......++.++++|+.+
T Consensus 104 ~~-~-~~~~~~~~~~g---------~l~~lP~~~~~~~~l~~~~~~~~~~~~~l~---~~~~~~~~~~s~~e~~~~---- 165 (397)
T 3hdq_A 104 WR-P-YQHRVLASVDG---------QLLPIPINLDTVNRLYGLNLTSFQVEEFFA---SVAEKVEQVRTSEDVVVS---- 165 (397)
T ss_dssp EE-E-CCCBEEEEETT---------EEEEESCCHHHHHHHHTCCCCHHHHHHHHH---HHCCCCSSCCBHHHHHHH----
T ss_pred cc-c-ccccceEEECC---------EEEEcCCChHHHHHhhccCCCHHHHHHHHh---hcccCCCCCcCHHHHHHH----
Confidence 31 1 11111111111 111122111 11110 01111111 112234567889998775
Q ss_pred ChhhhhhchHHHHHHHHHHHH-HhhhcCCcccccccccccc--------ccccCCc-cccccChHHHHHHHhh--cCCcc
Q 039105 175 HPELRQEGLAYEVLQWYICRM-EAWFAVDADMISLKCWDQE--------QVLSGGH-GLMVQGYDPVIKALSK--DIDIR 242 (493)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~--------~~~~~g~-~~~~~G~~~l~~~L~~--gv~i~ 242 (493)
.+++++.+.++.++ .+.|+.+++++|+.++... ..+.+.. ++|.+|+.+++++|++ |++|+
T Consensus 166 -------~~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~~l~e~l~~~~g~~V~ 238 (397)
T 3hdq_A 166 -------KVGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYTRMFQNMLSSPNIKVM 238 (397)
T ss_dssp -------HHHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHHHHHHHHTCSTTEEEE
T ss_pred -------hcCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHHHHHHHHHhccCCEEE
Confidence 47778888888874 5799999999997654421 1112222 3699999999999986 78999
Q ss_pred ccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCC
Q 039105 243 LNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPN 322 (493)
Q Consensus 243 ~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~ 322 (493)
+|++|+++ +.++.+|+||+|.|+..+... ....+.|.+...+.+.++...+.+
T Consensus 239 l~~~v~~~-------------~~~~~~d~vI~T~P~d~~~~~--------------~~g~L~yrsl~~~~~~~~~~~~~~ 291 (397)
T 3hdq_A 239 LNTDYREI-------------ADFIPFQHMIYTGPVDAFFDF--------------CYGKLPYRSLEFRHETHDTEQLLP 291 (397)
T ss_dssp ESCCGGGT-------------TTTSCEEEEEECSCHHHHTTT--------------TTCCCCEEEEEEEEEEESSSCSCS
T ss_pred ECCeEEec-------------cccccCCEEEEcCCHHHHHHH--------------hcCCCCCceEEEEEEEeccccCCC
Confidence 99999733 345679999999998876320 234667777777777777654443
Q ss_pred CCcceeecCCC-Cceeeeecc-ccCCCCcEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhCCCCCCCcEEEEcccCCC
Q 039105 323 VELLGVVAPTS-YACGYFLNL-HKATGHPVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMFPDATEPVQYLVSRWGTD 400 (493)
Q Consensus 323 ~~~~g~~~~~~-~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~~~~~~~~~~w~~~ 400 (493)
..+.-+...+. ...+.+.++ ..+.++++++...+....+++....+++-.+..
T Consensus 292 ~~~vn~~d~~p~tRi~e~k~~~~~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~------------------------- 346 (397)
T 3hdq_A 292 TGTVNYPNDYAYTRVSEFKHITGQRHHQTSVVYEYPRAEGDPYYPVPRPENAELY------------------------- 346 (397)
T ss_dssp SSEEECSSSSSCSEEEEHHHHHCCCCSSEEEEEEEEESSSSCCEECCSHHHHHHH-------------------------
T ss_pred CeEEEeCCCCcceEEEeecccCCCCCCCEEEEEEECCCCCccccccCchhHHHHH-------------------------
Confidence 32221111111 111111111 112234444433222111111111111111000
Q ss_pred CCCCccccCCCCCCChhHHHHhhCccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHH
Q 039105 401 PNTLGCYSYDVVGMPGDLYERLRAPLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQK 460 (493)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~ 460 (493)
..+..+....+|++++|......| -.|+.++.+|+.+++++++
T Consensus 347 ----------------~~y~~~a~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~ 389 (397)
T 3hdq_A 347 ----------------KKYEALADAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQG 389 (397)
T ss_dssp ----------------HHHHHHHHHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC
T ss_pred ----------------HHHHHHHhcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhc
Confidence 111122223579999999887665 7999999999999998865
No 30
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.88 E-value=2e-21 Score=194.89 Aligned_cols=242 Identities=14% Similarity=0.125 Sum_probs=138.1
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCC-ce---------------eecccceeeCCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFG-CP---------------VDMGASWLHGVC 88 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g-~~---------------~d~G~~~~~~~~ 88 (493)
+..++||||||||++||+||+.|+++|++|+|+|+++++||+++|...+| +. ++.|.++..+..
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 55779999999999999999999999999999999999999999976554 22 345555443322
Q ss_pred -----CCCchHHHHHHhCCce--eeeCCCCcccccCCccceeeecCC-CccccHHHH-HHHHHHHHHHHHHHHHhhhc--
Q 039105 89 -----NENPLAPLIRRLGLTL--YRTSGDNSVLYDHDLESYALYDMD-GNKVEKEMA-IKVGEIFKRILNETQKVRDE-- 157 (493)
Q Consensus 89 -----~~~~~~~l~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 157 (493)
....+.++++++|+.. ........+.+.++. .+. +..+ ...+..... ..-...+.++..........
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~-~~~-~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p 165 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGK-IYK-VPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDL 165 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTE-EEE-CCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBG
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCe-EEE-CCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCc
Confidence 3467889999999852 111111222222111 011 0000 000000000 00112344444444333211
Q ss_pred ------CCCCCCHHHHHHHHHhcChhhhhhchHHHHHHHHHHHHHh----hhcCCccccccc---cccc-cccc-cCCcc
Q 039105 158 ------HTNDMSVLQAISIVLDRHPELRQEGLAYEVLQWYICRMEA----WFAVDADMISLK---CWDQ-EQVL-SGGHG 222 (493)
Q Consensus 158 ------~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~---~~~~-~~~~-~~g~~ 222 (493)
.....++.++++++ ...+++.+.+...... .+...+...++. .+.. ...+ .+.+.
T Consensus 166 ~~~~~~~~~~~s~~~~l~~~----------~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~~~~~~~ 235 (453)
T 2bcg_G 166 STHQGLDLDKNTMDEVYYKF----------GLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARYGKSPYL 235 (453)
T ss_dssp GGSTTCCTTTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHHSSCSEE
T ss_pred hhhhccccccCCHHHHHHHh----------CCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhhcCCceE
Confidence 12455676666543 2233333322111110 011112222221 1110 0011 23344
Q ss_pred ccccChHHHHHHHhh-----cCCccccceeEEEEec--CCcE-EEEEcCCcEEEcCEEEEecChh
Q 039105 223 LMVQGYDPVIKALSK-----DIDIRLNQRVTKISNG--CNKV-MVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 223 ~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I~~~--~~~v-~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
++.+|+..++++|.+ |++|++|++|++|..+ ++++ .|.+ +|++++||+||+|+++.
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~ 299 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYF 299 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCcc
Confidence 889999999988863 8899999999999987 6765 5666 57789999999999875
No 31
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.82 E-value=2.6e-19 Score=178.30 Aligned_cols=234 Identities=15% Similarity=0.128 Sum_probs=143.4
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccC-C--------------------CCceeecccce
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDY-S--------------------FGCPVDMGASW 83 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~-~--------------------~g~~~d~G~~~ 83 (493)
|.+++||+|||||++||+||+.|+++|++|+|+|+++++||+++|.. . .++.+|.|+++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 56779999999999999999999999999999999999999999877 1 34677888887
Q ss_pred eeCCCCCCchHHHHHHhCCcee--eeCCCCcccccCCccceeeecCCCccccHHHHHH---------HHHHHHHHHHHHH
Q 039105 84 LHGVCNENPLAPLIRRLGLTLY--RTSGDNSVLYDHDLESYALYDMDGNKVEKEMAIK---------VGEIFKRILNETQ 152 (493)
Q Consensus 84 ~~~~~~~~~~~~l~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 152 (493)
+. ....+.++++++|+... .......+.+.++. .+ .++.+.... -...+.++.....
T Consensus 83 l~---~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~-~~--------~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 150 (433)
T 1d5t_A 83 LM---ANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGK-IY--------KVPSTETEALASNLMGMFEKRRFRKFLVFVA 150 (433)
T ss_dssp EE---TTSHHHHHHHHHTGGGGCCEEECCEEEEEETTE-EE--------ECCCSHHHHHHCSSSCHHHHHHHHHHHHHHH
T ss_pred ee---ccchHHHHHHHcCCccceEEEEeCceEEeeCCE-EE--------ECCCCHHHHhhCcccChhhHHHHHHHHHHHH
Confidence 76 34578899999997621 11111122222111 00 111110000 1123444444444
Q ss_pred Hhhhc--------CCCCCCHHHHHHHHHhcChhhhhhchHHHHHHHHHHHHHhhhcCCccccccc-------cccc-cc-
Q 039105 153 KVRDE--------HTNDMSVLQAISIVLDRHPELRQEGLAYEVLQWYICRMEAWFAVDADMISLK-------CWDQ-EQ- 215 (493)
Q Consensus 153 ~~~~~--------~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-------~~~~-~~- 215 (493)
++... .....++.++++++ ...+.+.+.+...+..+.+..+...+.. .+.. ..
T Consensus 151 ~~~~~~p~~~~~~~~~~~s~~~~l~~~----------~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~ 220 (433)
T 1d5t_A 151 NFDENDPKTFEGVDPQNTSMRDVYRKF----------DLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLAR 220 (433)
T ss_dssp HCCTTCGGGGTTCCTTTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCS
T ss_pred hhcccCchhccccccccCCHHHHHHHc----------CCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHh
Confidence 32211 13456777776543 2233333332222111111222222211 1110 00
Q ss_pred cccCCccccccChHHHHHHHhh-----cCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 216 VLSGGHGLMVQGYDPVIKALSK-----DIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 216 ~~~~g~~~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+...++.+|++.++++|.+ |++|++|++|++|..+++++.+...+|++++||+||+|+++..
T Consensus 221 ~g~~~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~ 290 (433)
T 1d5t_A 221 YGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVP 290 (433)
T ss_dssp SSCCSEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCG
T ss_pred cCCCcEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCc
Confidence 1122356889999999988864 8899999999999988888764445788899999999998764
No 32
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.82 E-value=6.1e-20 Score=181.81 Aligned_cols=242 Identities=14% Similarity=0.108 Sum_probs=146.5
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCC--------------------Cceeeccccee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSF--------------------GCPVDMGASWL 84 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~--------------------g~~~d~G~~~~ 84 (493)
+.+++||+|||||++|+++|+.|+++|++|+|+|+++++||++++...+ ++.+|.+++++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 5677999999999999999999999999999999999999999886421 46789988887
Q ss_pred eCCCCCCchHHHHHHhCCce--eeeCCCCcccccCCccceeeecCCCccccHHHH---------HHHHHHHHHHHHHHHH
Q 039105 85 HGVCNENPLAPLIRRLGLTL--YRTSGDNSVLYDHDLESYALYDMDGNKVEKEMA---------IKVGEIFKRILNETQK 153 (493)
Q Consensus 85 ~~~~~~~~~~~l~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 153 (493)
. ....+.+++.++|+.. .+......+.+..+.............+|.+.. ..-+..+.+++..+..
T Consensus 97 ~---~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~ 173 (475)
T 3p1w_A 97 L---VGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSE 173 (475)
T ss_dssp E---TTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHH
T ss_pred e---cCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHh
Confidence 5 4568899999999862 222222222221100000000000001111110 0112234555555544
Q ss_pred hhhc--------CCCCCCHHHHHHHHHhcChhhhhhchHHHHHHHHHHHHHhhhcCCcccccccccc----cc-----cc
Q 039105 154 VRDE--------HTNDMSVLQAISIVLDRHPELRQEGLAYEVLQWYICRMEAWFAVDADMISLKCWD----QE-----QV 216 (493)
Q Consensus 154 ~~~~--------~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~----~~-----~~ 216 (493)
+... ...+.++.+|++++ ++++.+.+.+...+......+..+.++.... .+ .+
T Consensus 174 ~~~~~~~~~~~~~l~~~s~~e~l~~~----------gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y 243 (475)
T 3p1w_A 174 WDANKRNTWDNLDPYKLTMLEIYKHF----------NLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF 243 (475)
T ss_dssp CCTTCGGGSTTCCTTTSBHHHHHHHT----------TCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred hhhccchhhhcccccCCCHHHHHHHc----------CCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc
Confidence 3211 12456788877653 4555555543332221111111111221111 00 01
Q ss_pred ccCCccccccChHHHHHHHhh-----cCCccccceeEEEEe-cCCc-EEEEEcCCcEEEcCEEEEecChh
Q 039105 217 LSGGHGLMVQGYDPVIKALSK-----DIDIRLNQRVTKISN-GCNK-VMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 217 ~~~g~~~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I~~-~~~~-v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
......+|.+|+..++++|.+ |++|+++++|++|.. ++++ +.|++.+|++++||+||+|++..
T Consensus 244 g~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 244 GKSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp SSCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred CCCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 123467899999999998864 889999999999998 6666 46889999899999999999643
No 33
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.82 E-value=6.9e-18 Score=158.69 Aligned_cols=58 Identities=34% Similarity=0.555 Sum_probs=54.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLH 85 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~ 85 (493)
.+||+|||||+|||+||+.|+++|++|+||||++++||++++.+..+..+|.|++++.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d~g~~~~~ 59 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFT 59 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceeecCccccc
Confidence 5899999999999999999999999999999999999999998888999999988764
No 34
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.79 E-value=8.5e-19 Score=169.00 Aligned_cols=80 Identities=33% Similarity=0.457 Sum_probs=70.8
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC-CCCCceeeccC----------CCCceeecccceeeCCCCCCch
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESR-DRLGGRIHTDY----------SFGCPVDMGASWLHGVCNENPL 93 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~-~~~GG~~~s~~----------~~g~~~d~G~~~~~~~~~~~~~ 93 (493)
+..++||+|||||++||+||+.|+++|++|+|||++ +++||++.+.. ..|+.+|.|+++++. .+..+
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~~~~~~~~~~~~~~e~G~~~~~~--~~~~~ 118 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKKGEPSPFADPAQYAEAGAMRLPS--FHPLT 118 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCTTSCCSSSSTTCCEESSCCCEET--TCHHH
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccccccccccCCCcEEecCceeecc--hHHHH
Confidence 456789999999999999999999999999999999 99999999876 357899999999874 45678
Q ss_pred HHHHHHhCCceee
Q 039105 94 APLIRRLGLTLYR 106 (493)
Q Consensus 94 ~~l~~~lg~~~~~ 106 (493)
.++++++|++...
T Consensus 119 ~~~~~~lGl~~~~ 131 (376)
T 2e1m_A 119 LALIDKLGLKRRL 131 (376)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHcCCCcce
Confidence 9999999998654
No 35
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.58 E-value=3.9e-15 Score=128.53 Aligned_cols=113 Identities=19% Similarity=0.224 Sum_probs=99.4
Q ss_pred cEEEEEecchhhHHhhcCCHHHHHHHHHHHHHHhC-CCCCCCc-EE--EEcccCCCCCCCccccCCCCCCChhHHHHhhC
Q 039105 349 PVLVYMAAGRFAYDLEKLSDESAANFVMMQLKKMF-PDATEPV-QY--LVSRWGTDPNTLGCYSYDVVGMPGDLYERLRA 424 (493)
Q Consensus 349 ~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~L~~~~-p~~~~~~-~~--~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (493)
.+|+.++.++....+..++++++++.++++|+++| |+. .++ .. ..++|..++|+.|+|....|+.....++.+.+
T Consensus 37 ~~L~~~~~g~~A~~~~~l~~~e~~~~~l~~L~~~~g~~~-~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~ 115 (181)
T 2e1m_C 37 VVLAAYSWSDDAARWDSFDDAERYGYALENLQSVHGRRI-EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVR 115 (181)
T ss_dssp EEEEEEEEHHHHHHHTTSCTTTTHHHHHHHHHHHHCGGG-GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHS
T ss_pred EEEEEEcCChHHHHHHcCCHHHHHHHHHHHHHHHhCCCc-HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhC
Confidence 57888888888888989999999999999999999 665 555 56 78999999999999987778887677888999
Q ss_pred ccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHH
Q 039105 425 PLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLL 463 (493)
Q Consensus 425 ~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~ 463 (493)
|.++|||||++++. ++|+++||+.||.++|++|+..+.
T Consensus 116 p~grl~FAGe~ts~-~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 116 PEGPVYFAGEHVSL-KHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp CBTTEEECSGGGTT-STTSHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCcEEEEEHHHcC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999996 789999999999999999987653
No 36
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.55 E-value=1.4e-13 Score=135.48 Aligned_cols=39 Identities=33% Similarity=0.567 Sum_probs=36.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
+.|||+|||||+|||+||+.|+++|++|+||||++.+|.
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 359999999999999999999999999999999887764
No 37
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.51 E-value=8.7e-13 Score=130.48 Aligned_cols=50 Identities=18% Similarity=0.223 Sum_probs=42.6
Q ss_pred HHHHHhhcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhh
Q 039105 231 VIKALSKDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 231 l~~~L~~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
+.+.+.+ ++|+++++|++|+.+++++.|++.+|++++||.||.|.+....
T Consensus 133 L~~~~~~-~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 133 MLDYWGR-DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSA 182 (407)
T ss_dssp HHHHHCG-GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCS
T ss_pred HHHhCCc-CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChH
Confidence 3344444 7899999999999998899999999999999999999987654
No 38
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.51 E-value=1.1e-13 Score=141.12 Aligned_cols=58 Identities=12% Similarity=0.058 Sum_probs=49.1
Q ss_pred CCccccccChHHHHHHHhh-----cCCccccceeEEEEecC--CcE-EEEEcCCcEEEcCEEEEec
Q 039105 219 GGHGLMVQGYDPVIKALSK-----DIDIRLNQRVTKISNGC--NKV-MVTVEDGRNFVADAAIVTV 276 (493)
Q Consensus 219 ~g~~~~~~G~~~l~~~L~~-----gv~i~~~~~V~~I~~~~--~~v-~V~~~~G~~~~ad~VI~a~ 276 (493)
++..++.+|++.|+++|.+ |++|+++++|++|..++ +++ .|++.+|++++||+||++.
T Consensus 368 sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~ 433 (650)
T 1vg0_A 368 TPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIED 433 (650)
T ss_dssp SSEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEG
T ss_pred CceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEECh
Confidence 4778999999999998854 88999999999998876 665 4556789999999999943
No 39
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.48 E-value=1.9e-12 Score=132.87 Aligned_cols=44 Identities=20% Similarity=0.133 Sum_probs=38.7
Q ss_pred cCCccccceeEEEEecCCcEEEEE--cCC-cEEEcCEEEEecChhhh
Q 039105 238 DIDIRLNQRVTKISNGCNKVMVTV--EDG-RNFVADAAIVTVPLGIL 281 (493)
Q Consensus 238 gv~i~~~~~V~~I~~~~~~v~V~~--~~G-~~~~ad~VI~a~~~~~l 281 (493)
|++|+++++|++|+.+++++.|++ .+| ++++||.||.|.+....
T Consensus 162 gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~ 208 (570)
T 3fmw_A 162 GAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRST 208 (570)
T ss_dssp TEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCH
T ss_pred CCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCch
Confidence 889999999999999888888776 678 68999999999987654
No 40
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.48 E-value=2.6e-12 Score=132.04 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=34.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
+.+||+|||||++|++||+.|+++|++|+|+|+.+.++
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~ 59 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPR 59 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCC
Confidence 46999999999999999999999999999999986544
No 41
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.47 E-value=2.6e-12 Score=131.68 Aligned_cols=60 Identities=27% Similarity=0.382 Sum_probs=46.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLT 103 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (493)
.++||+|||||++||++|+.|+++|++|+|+|+++.++...+ ++. -.....++++++|+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~------------~~~-----l~~~~~~~l~~lGl~ 63 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPR------------AAG-----QNPRTMELLRIGGVA 63 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCC------------SCC-----BCHHHHHHHHHTTCH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCc------------cce-----ECHHHHHHHHHcCCH
Confidence 468999999999999999999999999999999876542211 011 123567888888874
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.45 E-value=5.9e-12 Score=124.01 Aligned_cols=38 Identities=34% Similarity=0.580 Sum_probs=35.5
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
++||+|||||++||++|+.|+++|++|+|+|+++.+|+
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 48999999999999999999999999999999887765
No 43
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.45 E-value=1.1e-11 Score=121.53 Aligned_cols=51 Identities=8% Similarity=-0.023 Sum_probs=41.5
Q ss_pred HHHHHHHh-hcCCccccceeEEEEecCCcEE-EEEcCCcEEEcCEEEEecChhh
Q 039105 229 DPVIKALS-KDIDIRLNQRVTKISNGCNKVM-VTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 229 ~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
..+.+.+. .|++|+++++|++|+.+++++. |++.+| +++||.||+|++...
T Consensus 153 ~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 153 TAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWA 205 (382)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhH
Confidence 34444443 3899999999999999888876 888888 799999999998754
No 44
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.44 E-value=4.4e-13 Score=132.06 Aligned_cols=43 Identities=21% Similarity=0.402 Sum_probs=37.4
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
+.+++||+|||||++||+||+.|+++|++|+|+|+++.+|+..
T Consensus 24 ~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 24 VAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKI 66 (417)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCcee
Confidence 4567999999999999999999999999999999999998765
No 45
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.43 E-value=3.3e-12 Score=129.22 Aligned_cols=63 Identities=25% Similarity=0.258 Sum_probs=47.3
Q ss_pred cCCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCc
Q 039105 24 QIGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLT 103 (493)
Q Consensus 24 ~~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (493)
+..+++||+|||||++||++|+.|+++|++|+|+|+++.++...+ +..+ .....++++++|+.
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r------------~~~l-----~~~~~~~l~~lGl~ 69 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESR------------GLGF-----TARTMEVFDQRGIL 69 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCC------------SEEE-----CHHHHHHHHTTTCG
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCC------------cceE-----CHHHHHHHHHCCCH
Confidence 367889999999999999999999999999999999876642211 1111 13456788888874
No 46
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.43 E-value=2.4e-12 Score=127.84 Aligned_cols=50 Identities=16% Similarity=0.149 Sum_probs=39.6
Q ss_pred HHHHHh-hcCCccccceeEEEEecCCc--EEEEEcCCc--EEEcCEEEEecChhh
Q 039105 231 VIKALS-KDIDIRLNQRVTKISNGCNK--VMVTVEDGR--NFVADAAIVTVPLGI 280 (493)
Q Consensus 231 l~~~L~-~gv~i~~~~~V~~I~~~~~~--v~V~~~~G~--~~~ad~VI~a~~~~~ 280 (493)
+.+.+. .|++|+++++|++|+.++++ +.+.+.+|+ +++||.||.|++...
T Consensus 112 L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 112 LADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGC
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCch
Confidence 334333 38999999999999987766 456778887 699999999998665
No 47
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.42 E-value=1.8e-11 Score=123.80 Aligned_cols=45 Identities=11% Similarity=0.079 Sum_probs=39.3
Q ss_pred cCCccccceeEEEEecCCcEEEEEcCCc---EEEcCEEEEecChhhhh
Q 039105 238 DIDIRLNQRVTKISNGCNKVMVTVEDGR---NFVADAAIVTVPLGILK 282 (493)
Q Consensus 238 gv~i~~~~~V~~I~~~~~~v~V~~~~G~---~~~ad~VI~a~~~~~l~ 282 (493)
|++|+++++|++|+.++++++|++.++. +++||+||.|.+.+...
T Consensus 121 gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~V 168 (499)
T 2qa2_A 121 GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTV 168 (499)
T ss_dssp TCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHH
T ss_pred CCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHH
Confidence 8899999999999998888888887775 79999999999877643
No 48
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.41 E-value=4.9e-12 Score=126.75 Aligned_cols=38 Identities=32% Similarity=0.475 Sum_probs=34.7
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
..++||+|||||++||+||+.|+++|++|+|+|+++.+
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 34689999999999999999999999999999998754
No 49
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.41 E-value=1.1e-11 Score=122.50 Aligned_cols=52 Identities=13% Similarity=0.086 Sum_probs=41.6
Q ss_pred HHHHHhhc--CCccccceeEEEEec-CCcEEEEEcCCcEEEcCEEEEecChhhhh
Q 039105 231 VIKALSKD--IDIRLNQRVTKISNG-CNKVMVTVEDGRNFVADAAIVTVPLGILK 282 (493)
Q Consensus 231 l~~~L~~g--v~i~~~~~V~~I~~~-~~~v~V~~~~G~~~~ad~VI~a~~~~~l~ 282 (493)
+.+.|.+. .+|+++++|++++.. +++++|++++|++++||.||-|.+.+...
T Consensus 114 L~~~L~~~~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 114 LKEILNKGLANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKV 168 (412)
T ss_dssp HHHHHHTTCTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred HHHHHHhhccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcch
Confidence 44445443 479999999999875 45689999999999999999999877654
No 50
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.41 E-value=2.9e-12 Score=124.81 Aligned_cols=43 Identities=33% Similarity=0.490 Sum_probs=38.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.+++||+|||||++|++||++|+++|++|+|+|+++.+|+.++
T Consensus 2 ~~~~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~~~~~~~s 44 (369)
T 3dme_A 2 STDIDCIVIGAGVVGLAIARALAAGGHEVLVAEAAEGIGTGTS 44 (369)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSCSTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCccC
Confidence 3568999999999999999999999999999999877776543
No 51
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.40 E-value=8e-12 Score=122.41 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=41.6
Q ss_pred HHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 229 DPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 229 ~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
..+.+.+. .|++|+++++|++|+.+++++.|.+.+| +++||.||+|++...
T Consensus 168 ~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 168 KAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWS 219 (382)
T ss_dssp HHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGT
T ss_pred HHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhH
Confidence 34444443 3899999999999998888888888887 899999999998754
No 52
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.38 E-value=4e-12 Score=126.98 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=44.0
Q ss_pred hHHHHHHHh-hcCCccccc---eeEEEEecCCcEE-EEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQ---RVTKISNGCNKVM-VTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~---~V~~I~~~~~~v~-V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|++++ +|++|..+++++. |++.+|++++||.||+|++...
T Consensus 164 ~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 164 LVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp HHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred HHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 344444444 389999999 9999999888887 9999998899999999998765
No 53
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.38 E-value=6e-13 Score=130.34 Aligned_cols=52 Identities=10% Similarity=0.075 Sum_probs=42.8
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|+.+++++.|++.+| +++||+||+|++...
T Consensus 157 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 157 HQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGH
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhH
Confidence 344444443 3899999999999999888899999888 899999999998754
No 54
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.38 E-value=2.1e-12 Score=135.92 Aligned_cols=53 Identities=8% Similarity=0.107 Sum_probs=44.2
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|..+++++.|.+.+|.+++||.||+|++...
T Consensus 420 ~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 420 TRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcch
Confidence 344444444 38999999999999998888999998888899999999998765
No 55
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.36 E-value=1.1e-11 Score=126.05 Aligned_cols=37 Identities=32% Similarity=0.423 Sum_probs=33.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
.++||+|||||++||+||+.|+++|++|+|+|+.+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~ 42 (512)
T 3e1t_A 6 EVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFP 42 (512)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSS
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCC
Confidence 4589999999999999999999999999999997643
No 56
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.34 E-value=5e-12 Score=133.18 Aligned_cols=53 Identities=4% Similarity=0.056 Sum_probs=43.2
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCc-EEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGR-NFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|+.+++++.|.+.+|+ +++||.||+|++...
T Consensus 415 ~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 415 THALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcch
Confidence 344555444 38999999999999998888999998887 899999999998764
No 57
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.29 E-value=3e-11 Score=118.88 Aligned_cols=52 Identities=12% Similarity=0.065 Sum_probs=40.3
Q ss_pred HHHHHh-hcCCccccceeEEEEecC-CcEEEEE-cCCc--EEEcCEEEEecChhhhh
Q 039105 231 VIKALS-KDIDIRLNQRVTKISNGC-NKVMVTV-EDGR--NFVADAAIVTVPLGILK 282 (493)
Q Consensus 231 l~~~L~-~gv~i~~~~~V~~I~~~~-~~v~V~~-~~G~--~~~ad~VI~a~~~~~l~ 282 (493)
+.+.+. .|++|+++++|++|+.++ +.+.|++ .+|+ +++||.||.|.+.....
T Consensus 109 L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~v 165 (394)
T 1k0i_A 109 LMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGIS 165 (394)
T ss_dssp HHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCST
T ss_pred HHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHH
Confidence 444443 388999999999998764 5577776 6887 69999999999876643
No 58
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=3.3e-11 Score=120.36 Aligned_cols=41 Identities=41% Similarity=0.564 Sum_probs=37.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
.++||+|||||++||+||+.|+++|.+|+|+|+.+.+|+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~ 65 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKL 65 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCcee
Confidence 45899999999999999999999999999999998888653
No 59
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.26 E-value=3e-11 Score=123.33 Aligned_cols=57 Identities=25% Similarity=0.327 Sum_probs=48.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccc
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGAS 82 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~ 82 (493)
..++||+|||||++|++||+.|++.|++|+|+|+++.+||.+......|..+|...+
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~ 75 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESI 75 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTT
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCch
Confidence 456899999999999999999999999999999999999987665556666555443
No 60
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.24 E-value=5e-11 Score=116.99 Aligned_cols=41 Identities=27% Similarity=0.479 Sum_probs=37.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
+++||+|||||++||+||+.|+++|.+|+|+|+++.+|+..
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhc
Confidence 35899999999999999999999999999999999887654
No 61
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.23 E-value=6.9e-11 Score=116.34 Aligned_cols=45 Identities=13% Similarity=0.057 Sum_probs=40.9
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
.|++|+++++|++|+.+++++.|++.+|++++||.||.|.+....
T Consensus 110 ~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 110 GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASV 154 (397)
T ss_dssp CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCH
T ss_pred CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchh
Confidence 488999999999999988889999999989999999999987664
No 62
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.23 E-value=6.4e-11 Score=115.50 Aligned_cols=52 Identities=23% Similarity=0.229 Sum_probs=42.6
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|+.+++++.|.+.+| +++||.||+|++...
T Consensus 152 ~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 152 IKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccH
Confidence 444555444 3899999999999998888888988888 599999999998765
No 63
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.22 E-value=6.8e-11 Score=116.42 Aligned_cols=45 Identities=16% Similarity=0.093 Sum_probs=39.9
Q ss_pred cCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhhhh
Q 039105 238 DIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGILK 282 (493)
Q Consensus 238 gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~l~ 282 (493)
+++|+++++|++|+.+++++.|++.+|++++||.||.|.+.....
T Consensus 140 ~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 140 NDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKV 184 (398)
T ss_dssp TTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSC
T ss_pred CCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhH
Confidence 468999999999999888899999999889999999999876643
No 64
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.21 E-value=3.7e-10 Score=116.41 Aligned_cols=43 Identities=33% Similarity=0.478 Sum_probs=39.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
..+.+||+|||||++||+||+.|+++|++|+|+|+.+.+||..
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNA 165 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCch
Confidence 3457999999999999999999999999999999999988764
No 65
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.21 E-value=6.6e-11 Score=116.50 Aligned_cols=51 Identities=16% Similarity=0.249 Sum_probs=41.5
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
...+.+.+. .|++|+++++|++|+.+++++.|.+.+| +++||.||+|++..
T Consensus 156 ~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 156 LAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcC
Confidence 344555443 4899999999999998888888888777 79999999999865
No 66
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.21 E-value=6.2e-10 Score=114.04 Aligned_cols=59 Identities=24% Similarity=0.300 Sum_probs=45.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCc
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLT 103 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (493)
.+||+|||||++||++|+.|+++|++|+|+|+++.++...+. ..+ .....++++++|+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~------------~~l-----~~~~~~~l~~lGl~ 84 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRV------------GTI-----GPRSMELFRRWGVA 84 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCC------------CEE-----CHHHHHHHHHTTCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCce------------eee-----CHHHHHHHHHcCCh
Confidence 579999999999999999999999999999998766532111 111 13456788888875
No 67
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.19 E-value=4.7e-10 Score=116.96 Aligned_cols=39 Identities=23% Similarity=0.366 Sum_probs=35.2
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeeCCCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYD-ASFKVVLLESRDRLG 64 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E~~~~~G 64 (493)
++++||+|||||++||++|+.|++ .|++|+|+|+++.++
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 356899999999999999999999 999999999986553
No 68
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.19 E-value=1.1e-10 Score=114.63 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=41.7
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|+.+++++.|.+.+| +++||.||+|++...
T Consensus 153 ~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 153 IRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccH
Confidence 344444443 3899999999999999887888888777 799999999998654
No 69
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.18 E-value=8.4e-11 Score=116.02 Aligned_cols=52 Identities=17% Similarity=0.056 Sum_probs=41.0
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCc-EEEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNK-VMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|..++++ +.|.+.+| +++||.||+|++...
T Consensus 177 ~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 177 AWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHS 230 (405)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhH
Confidence 344445444 38999999999999987776 46888888 799999999998654
No 70
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.18 E-value=9e-11 Score=120.11 Aligned_cols=53 Identities=26% Similarity=0.282 Sum_probs=44.1
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPV 77 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~ 77 (493)
.++++||+|||||++||+||+.|++.|++|+|+|+++.+||.+......|..+
T Consensus 13 ~~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~ 65 (542)
T 1w4x_A 13 PPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARC 65 (542)
T ss_dssp CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBC
T ss_pred CCCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceee
Confidence 34568999999999999999999999999999999999999765433344333
No 71
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.18 E-value=2.3e-09 Score=110.41 Aligned_cols=40 Identities=30% Similarity=0.558 Sum_probs=36.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeeCCCCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDA------SFKVVLLESRDRLGGR 66 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~------G~~V~v~E~~~~~GG~ 66 (493)
..+||+|||||++||+||+.|++. |++|+|+|+...+|+.
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH 79 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc
Confidence 358999999999999999999998 9999999999888865
No 72
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.16 E-value=3.2e-10 Score=115.22 Aligned_cols=41 Identities=34% Similarity=0.416 Sum_probs=38.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
..+||||||||++||+||+.|+++|++|+|+||.+.+||..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 46899999999999999999999999999999999998874
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.16 E-value=2e-10 Score=116.98 Aligned_cols=56 Identities=23% Similarity=0.297 Sum_probs=47.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHH-hCCCcEEEEeeCCCCCceeeccCCCCceeecccc
Q 039105 27 SLPSVIVIGGGISGLAAARILY-DASFKVVLLESRDRLGGRIHTDYSFGCPVDMGAS 82 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~-~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~ 82 (493)
.++||+|||||++||+||+.|+ +.|++|+|+|+++.+||.+......|...|...+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~ 63 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESH 63 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcc
Confidence 4589999999999999999999 8899999999999999987666666666665443
No 74
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.16 E-value=1.5e-10 Score=111.11 Aligned_cols=43 Identities=19% Similarity=0.359 Sum_probs=39.4
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 3568999999999999999999999999999999999988754
No 75
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.16 E-value=5.9e-10 Score=114.67 Aligned_cols=43 Identities=26% Similarity=0.390 Sum_probs=39.1
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
....+||+|||||++||+||+.|+++|.+|+|||+.+.+||..
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s 160 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNS 160 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTG
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcc
Confidence 3467899999999999999999999999999999999888753
No 76
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.14 E-value=2.3e-10 Score=111.05 Aligned_cols=44 Identities=27% Similarity=0.422 Sum_probs=39.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
|.+++||+|||||++||+||+.|+++|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 34578999999999999999999999999999999999998764
No 77
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.14 E-value=1.3e-10 Score=117.53 Aligned_cols=41 Identities=29% Similarity=0.380 Sum_probs=37.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
..+||+|||||++||+||+.|++.|++|+|+|+.+.++++.
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERT 146 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccc
Confidence 45899999999999999999999999999999998887764
No 78
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.12 E-value=1.1e-10 Score=114.88 Aligned_cols=52 Identities=12% Similarity=0.266 Sum_probs=43.7
Q ss_pred HHHHHHhh--cCCccccceeEEEEecCCcE--EEEEcCCcEEEcCEEEEecChhhh
Q 039105 230 PVIKALSK--DIDIRLNQRVTKISNGCNKV--MVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 230 ~l~~~L~~--gv~i~~~~~V~~I~~~~~~v--~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
.+.+.+.+ |++|+++++|++|+.+++++ .|++.+|++++||.||.|++....
T Consensus 112 ~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 112 LVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCH
T ss_pred HHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChH
Confidence 34555554 78999999999999988888 899999989999999999987654
No 79
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.11 E-value=2.8e-10 Score=110.04 Aligned_cols=41 Identities=37% Similarity=0.589 Sum_probs=38.5
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++||+||+.|+++|++|+|+|+++.+||.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~ 43 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQ 43 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCccc
Confidence 48999999999999999999999999999999999998754
No 80
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.09 E-value=6.7e-10 Score=119.55 Aligned_cols=52 Identities=23% Similarity=0.199 Sum_probs=41.5
Q ss_pred hHHHHHHHh-hcCCccccceeEEEEecCCcE-EEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVTKISNGCNKV-MVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|++|+.+++++ .|.+.+| +++||+||+|++...
T Consensus 154 ~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 154 VQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGH
T ss_pred HHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccch
Confidence 344555443 489999999999999887775 5888888 799999999998765
No 81
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.09 E-value=2.9e-10 Score=106.23 Aligned_cols=41 Identities=29% Similarity=0.482 Sum_probs=37.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDA-SFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~-G~~V~v~E~~~~~GG~~ 67 (493)
.++||+|||||++||+||+.|+++ |.+|+|+|+++.+||.+
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~ 79 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGA 79 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCce
Confidence 468999999999999999999997 99999999999888753
No 82
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.09 E-value=1.9e-10 Score=117.31 Aligned_cols=54 Identities=28% Similarity=0.497 Sum_probs=45.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeec
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDM 79 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~ 79 (493)
..++||+|||||++||+||+.|++.|++|+|+|+++.+||.+......|..+|.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~ 60 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDT 60 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecC
Confidence 356899999999999999999999999999999999999986554444544443
No 83
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.09 E-value=3.1e-10 Score=108.60 Aligned_cols=42 Identities=31% Similarity=0.410 Sum_probs=38.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
+++||+|||||++||+||+.|++.|++|+|+|+++.+||.+.
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 358999999999999999999999999999999999998763
No 84
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.08 E-value=5.8e-10 Score=106.22 Aligned_cols=40 Identities=23% Similarity=0.302 Sum_probs=36.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++||+||++|+++|++|+|+|++ +||.+.
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~ 53 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLT 53 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGG
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeec
Confidence 4689999999999999999999999999999997 888754
No 85
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.07 E-value=8.3e-11 Score=117.74 Aligned_cols=39 Identities=31% Similarity=0.370 Sum_probs=34.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCCCCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS-FKVVLLESRDRLGG 65 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~~~GG 65 (493)
+++||+|||||++|+++|++|+++| ++|+|+|++..+|+
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~~~ 61 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGS 61 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSSTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCCCC
Confidence 5689999999999999999999999 99999999555553
No 86
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.06 E-value=3.2e-09 Score=107.09 Aligned_cols=49 Identities=20% Similarity=0.268 Sum_probs=41.3
Q ss_pred HHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 231 VIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 231 l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
+.+.+. .|++++++++|++|+.+++++.|.+.+|+++.+|.||+|++..
T Consensus 238 l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 238 LNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCC
Confidence 334443 3899999999999999888889999999899999999999753
No 87
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.05 E-value=4.4e-10 Score=115.16 Aligned_cols=42 Identities=29% Similarity=0.331 Sum_probs=37.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
.+.+||+|||||++|+++|+.|+++|++|+|+|+++..+|..
T Consensus 16 ~~~~DVvVIGgGi~Gl~~A~~La~~G~~V~LlEk~d~~~GtS 57 (561)
T 3da1_A 16 EKQLDLLVIGGGITGAGIALDAQVRGIQTGLVEMNDFASGTS 57 (561)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSSTTCSGG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCcEEEEECCCCCCCcc
Confidence 357999999999999999999999999999999997766653
No 88
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.05 E-value=1.1e-09 Score=103.57 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=34.9
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
..++|||+|||||+|||+||++|+|+|++|+|+|+. .+||.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~ 43 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNR 43 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGG
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCe
Confidence 346799999999999999999999999999999995 56664
No 89
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.05 E-value=5.7e-10 Score=107.05 Aligned_cols=44 Identities=30% Similarity=0.337 Sum_probs=37.2
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC----CCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD----RLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~----~~GG~~~ 68 (493)
...++||+|||||++||+||+.|+++|++|+|+|+.+ .+||.+.
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~ 66 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLT 66 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGG
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccc
Confidence 4567999999999999999999999999999999944 6776543
No 90
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.04 E-value=1.5e-09 Score=108.42 Aligned_cols=43 Identities=33% Similarity=0.535 Sum_probs=39.3
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF--KVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~~~GG~~~ 68 (493)
.+.+||+|||||++||+||..|++.|. +|+|||+++.+||.+.
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~ 48 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWN 48 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeec
Confidence 356899999999999999999999999 9999999999998654
No 91
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.04 E-value=1.6e-08 Score=105.64 Aligned_cols=36 Identities=33% Similarity=0.630 Sum_probs=33.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHh-----CCCcEEEEeeCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYD-----ASFKVVLLESRDRL 63 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~-----~G~~V~v~E~~~~~ 63 (493)
++||+|||||++||++|..|++ .|++|+|+|+++.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999997543
No 92
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.02 E-value=1.8e-09 Score=109.37 Aligned_cols=39 Identities=33% Similarity=0.483 Sum_probs=34.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
+++||+|||||++|+++|++|+++|++|+|+|+++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCC
Confidence 358999999999999999999999999999999764433
No 93
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.02 E-value=1.5e-09 Score=103.09 Aligned_cols=41 Identities=32% Similarity=0.432 Sum_probs=35.7
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
|.++|||+|||||+|||+||.+|++.|++|+|+|+.. .||.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~ 41 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGV 41 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGC
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCc
Confidence 5678999999999999999999999999999999953 4443
No 94
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.01 E-value=1.3e-09 Score=106.53 Aligned_cols=39 Identities=33% Similarity=0.435 Sum_probs=35.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
+.+||+|||||++||++|+.|+++|++|+|+|+++.+++
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~ 48 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA 48 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC
Confidence 358999999999999999999999999999999877653
No 95
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.01 E-value=8.5e-10 Score=108.98 Aligned_cols=38 Identities=34% Similarity=0.517 Sum_probs=34.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCc-EEEEeeCCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFK-VVLLESRDRLG 64 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~-V~v~E~~~~~G 64 (493)
+.+||+|||||++||++|..|+++|++ |+|+|+.+.++
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~ 41 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR 41 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc
Confidence 458999999999999999999999999 99999987654
No 96
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.99 E-value=1.3e-09 Score=102.85 Aligned_cols=41 Identities=24% Similarity=0.523 Sum_probs=37.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~GG~~ 67 (493)
..+||+|||||++||+||++|+++ |++|+|+|+...+||.+
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~ 120 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGA 120 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTT
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCcc
Confidence 469999999999999999999997 99999999999888754
No 97
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.96 E-value=3.5e-09 Score=100.36 Aligned_cols=40 Identities=33% Similarity=0.527 Sum_probs=35.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++||+||..|++.|+ +|+|+|+ +.+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~-~~~gg~~~ 41 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEK-GMPGGQIT 41 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECS-SSTTCGGG
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcC-CCCCcccc
Confidence 4799999999999999999999999 9999999 46777653
No 98
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.96 E-value=8.4e-09 Score=106.04 Aligned_cols=42 Identities=43% Similarity=0.538 Sum_probs=38.7
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
...+||+|||||++||+||+.|+++|++|+|+|+.+.+||..
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNT 165 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcch
Confidence 356899999999999999999999999999999999998764
No 99
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.96 E-value=3.2e-09 Score=101.04 Aligned_cols=44 Identities=25% Similarity=0.410 Sum_probs=38.0
Q ss_pred cCCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 24 QIGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 24 ~~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.|..++||+|||||++|++||+.|+++|++|+|+|+ ..+||.+.
T Consensus 12 ~m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~ 55 (319)
T 3cty_A 12 EKERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTA 55 (319)
T ss_dssp --CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGG
T ss_pred cccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCcccc
Confidence 366679999999999999999999999999999999 56787653
No 100
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.95 E-value=3.4e-09 Score=101.10 Aligned_cols=43 Identities=35% Similarity=0.483 Sum_probs=38.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
+..++||+|||||++||+||..|++.|++|+|+|++ .+||.+.
T Consensus 5 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 47 (325)
T 2q7v_A 5 TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIA 47 (325)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccc
Confidence 345689999999999999999999999999999997 7888754
No 101
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.93 E-value=7.2e-09 Score=93.64 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=32.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
++||+|||||++|++||..|++.|.+|+|+|++.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5899999999999999999999999999999973
No 102
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.93 E-value=1.6e-09 Score=109.45 Aligned_cols=41 Identities=32% Similarity=0.369 Sum_probs=37.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
....+||+|||||++||++|..|++.|++|+|+|+++.+|+
T Consensus 89 ~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~ 129 (497)
T 2bry_A 89 ACTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR 129 (497)
T ss_dssp TTTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC
T ss_pred ccCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC
Confidence 45679999999999999999999999999999999887763
No 103
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.92 E-value=8.7e-09 Score=89.16 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=35.7
Q ss_pred cCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 238 DIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 238 gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
|++++++ +|++|+.+++++.|++++| ++++|.||+|++..
T Consensus 70 gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 70 GAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKD 109 (180)
T ss_dssp TCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTC
T ss_pred CCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCC
Confidence 7899999 9999998877888998888 89999999999853
No 104
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.92 E-value=1e-09 Score=108.14 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=35.5
Q ss_pred hHHHHHHHh-hcCCccccceeE---------EEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 228 YDPVIKALS-KDIDIRLNQRVT---------KISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 228 ~~~l~~~L~-~gv~i~~~~~V~---------~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
...+.+.+. .|++|+++++|+ +|..+++++.|.+.+| +++||.||+|++...
T Consensus 175 ~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 175 ALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccH
Confidence 344445443 388999999999 9988777787877777 799999999998764
No 105
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.91 E-value=4.8e-09 Score=100.55 Aligned_cols=42 Identities=31% Similarity=0.473 Sum_probs=37.2
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
+.+++||+|||||++||+||+.|++.|++|+|+|+. .+||.+
T Consensus 11 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~ 52 (335)
T 2a87_A 11 HHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGAL 52 (335)
T ss_dssp CCCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGG
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCce
Confidence 456799999999999999999999999999999974 677654
No 106
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.91 E-value=3.4e-09 Score=103.02 Aligned_cols=40 Identities=30% Similarity=0.501 Sum_probs=36.9
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++||+||++|++.|+ +|+|||+++ +||.+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~ 44 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFK 44 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccc
Confidence 5899999999999999999999999 999999988 888654
No 107
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.89 E-value=7.5e-09 Score=97.12 Aligned_cols=42 Identities=36% Similarity=0.555 Sum_probs=38.4
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCCcee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLGGRI 67 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~GG~~ 67 (493)
...+||+|||||++||+||+.|+++ |++|+|+|+++.+||.+
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~ 106 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGS 106 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTT
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccc
Confidence 4568999999999999999999998 99999999999998753
No 108
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.88 E-value=4.3e-09 Score=108.07 Aligned_cols=39 Identities=31% Similarity=0.449 Sum_probs=35.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
.++||+|||||++|+++|+.|+++|++|+|+|+++..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 569999999999999999999999999999999875555
No 109
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.87 E-value=4.1e-08 Score=101.93 Aligned_cols=40 Identities=25% Similarity=0.354 Sum_probs=35.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
..+||+|||||++||+||+.|+++|.+|+|+||....+|.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~ 43 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSH 43 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCc
Confidence 3589999999999999999999999999999998765544
No 110
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.87 E-value=1.4e-08 Score=101.83 Aligned_cols=43 Identities=30% Similarity=0.460 Sum_probs=39.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.+++||+|||||++||+||..|++.|++|+|+|+++.+||.|.
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~ 44 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCL 44 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHH
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCccc
Confidence 3468999999999999999999999999999999899998864
No 111
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.87 E-value=4.2e-08 Score=100.97 Aligned_cols=39 Identities=23% Similarity=0.214 Sum_probs=35.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
.+||+|||||++||+||+.|+++|.+|+|+||....||.
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~ 45 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSH 45 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCc
Confidence 589999999999999999999999999999998776553
No 112
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.87 E-value=4.6e-08 Score=100.83 Aligned_cols=40 Identities=25% Similarity=0.233 Sum_probs=35.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
..+||+|||||+|||+||+.|+++|.+|+|+|+....||.
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 4589999999999999999999999999999997765543
No 113
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.86 E-value=1.8e-08 Score=94.56 Aligned_cols=35 Identities=37% Similarity=0.532 Sum_probs=32.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
++||+|||||++||+||..|+++|++|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCc
Confidence 48999999999999999999999999999999653
No 114
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.86 E-value=9.8e-09 Score=102.83 Aligned_cols=41 Identities=24% Similarity=0.466 Sum_probs=38.4
Q ss_pred CcEEEECcCHHHHHHHHHHHh---CCCc---EEEEeeCCCCCceeec
Q 039105 29 PSVIVIGGGISGLAAARILYD---ASFK---VVLLESRDRLGGRIHT 69 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~---~G~~---V~v~E~~~~~GG~~~s 69 (493)
+||+|||||++||+||..|++ .|++ |+|||+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999997654
No 115
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.1e-09 Score=104.49 Aligned_cols=70 Identities=27% Similarity=0.392 Sum_probs=52.0
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYD--ASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGL 102 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~--~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~ 102 (493)
....+||+|||||+|||+||++|++ .|++|+|||+++.+||.+.. .++... ...+ .....++++++|+
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~---~~~~~~--~~~l-----~~~~~~~~~e~Gv 131 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL---GGQLFS--AMVM-----RKPAHLFLQELEI 131 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC---CSTTCC--CEEE-----ETTTHHHHHHTTC
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe---CCccCC--HHHH-----HHHHHHHHHHcCC
Confidence 3457899999999999999999975 59999999999999998653 122111 0111 2356778899998
Q ss_pred ce
Q 039105 103 TL 104 (493)
Q Consensus 103 ~~ 104 (493)
+.
T Consensus 132 ~~ 133 (326)
T 3fpz_A 132 PY 133 (326)
T ss_dssp CC
T ss_pred EE
Confidence 74
No 116
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.84 E-value=1.1e-08 Score=97.40 Aligned_cols=40 Identities=25% Similarity=0.461 Sum_probs=35.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
+++||+|||||++||+||+.|++.|++|+|+|+ ..+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~ 43 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQL 43 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceE
Confidence 458999999999999999999999999999997 4677764
No 117
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.83 E-value=7.3e-09 Score=99.15 Aligned_cols=40 Identities=25% Similarity=0.321 Sum_probs=35.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEee----CCCCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLES----RDRLGGR 66 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~----~~~~GG~ 66 (493)
+++||+|||||++|++||+.|++.|++|+|+|+ ...+||.
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~ 50 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ 50 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce
Confidence 358999999999999999999999999999999 4455554
No 118
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.83 E-value=1.3e-08 Score=96.37 Aligned_cols=42 Identities=33% Similarity=0.541 Sum_probs=38.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEE-EeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVL-LESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v-~E~~~~~GG~~~ 68 (493)
.+++||+|||||++||+||+.|+++|++|+| +|+ +.+||.+.
T Consensus 2 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~ 44 (315)
T 3r9u_A 2 NAMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQIT 44 (315)
T ss_dssp CSCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGG
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceee
Confidence 3578999999999999999999999999999 999 77888753
No 119
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.83 E-value=1.6e-10 Score=92.19 Aligned_cols=108 Identities=19% Similarity=0.238 Sum_probs=66.0
Q ss_pred cEEEcCEEEEecChhhhhcCcccccCCCcHHHHHHHhhcCCCceeEEEEEcCCCCCCCCCcceeecCCCCceeeeecccc
Q 039105 265 RNFVADAAIVTVPLGILKANLIQFEPKLPEWKLSAIADIGVGNENKIALRFDNVFWPNVELLGVVAPTSYACGYFLNLHK 344 (493)
Q Consensus 265 ~~~~ad~VI~a~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 344 (493)
++++||+||+|+|+..++ .+.|.|+||+...+++..++++...|+++.|+.+||.+....|. ....
T Consensus 4 ~~~~Ad~VIvTvP~~vL~--~I~F~P~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~~~gd------------~s~~ 69 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLR--FVKVTPPFSYKKRRAVIETHYDQATKVLLEFSRRWWEFTEADWK------------RELD 69 (130)
T ss_dssp EEEEESEEEECSCHHHHT--TSEEESCCCHHHHHHHHHCCEECEEEEEEEESSCGGGCCHHHHH------------HHHH
T ss_pred eEEEcCEEEEcCCHHHHh--cCcCCCCCCHHHHHHHHhCCCcceeEEEEEECCCCCCCCCcccc------------ccCC
Confidence 368999999999999987 47899999999999999999999999999999999987643331 1011
Q ss_pred CCCCcEEEEEe-cchhhHHhhcCCHHHHHHHHHHHHHHhCCCCC
Q 039105 345 ATGHPVLVYMA-AGRFAYDLEKLSDESAANFVMMQLKKMFPDAT 387 (493)
Q Consensus 345 ~~~~~~l~~~~-~~~~~~~~~~~~~~e~~~~~~~~L~~~~p~~~ 387 (493)
++...+++++. +++.+..+..+++ +..+.+...|.+++|++.
T Consensus 70 ~~~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~ 112 (130)
T 2e1m_B 70 AIAPGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVD 112 (130)
T ss_dssp HHSTTHHHHHHHHCCCSCCCC-----------------------
T ss_pred CCCCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCc
Confidence 12223566666 3666667777766 577789999999999765
No 120
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.81 E-value=3.6e-08 Score=99.10 Aligned_cols=44 Identities=34% Similarity=0.467 Sum_probs=39.7
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
..+++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 3 ~~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 3 GSDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp -CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CCccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 35679999999999999999999999999999999988988753
No 121
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.80 E-value=2.3e-08 Score=98.76 Aligned_cols=43 Identities=28% Similarity=0.371 Sum_probs=38.1
Q ss_pred hcCCccccceeEEEEecCCcE-EEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKV-MVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++|+++++|++|+.+++++ .|.+.+|+++.||.||+|++..
T Consensus 207 ~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 207 HGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIV 250 (415)
T ss_dssp TTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCE
T ss_pred CCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCc
Confidence 389999999999999887776 6889999999999999999743
No 122
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.79 E-value=1e-08 Score=104.71 Aligned_cols=49 Identities=27% Similarity=0.301 Sum_probs=39.0
Q ss_pred HHHHHhh--cCCccccceeEEEEecCCcE-EEEEcCCcEEEcCEEEEecChhh
Q 039105 231 VIKALSK--DIDIRLNQRVTKISNGCNKV-MVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 231 l~~~L~~--gv~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
+.+.+.+ |++| ++++|++|..+++++ .|.+.+|.+++||.||+|++...
T Consensus 130 L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 130 VRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 3444443 7888 688999999877775 68888898899999999998654
No 123
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.79 E-value=2e-08 Score=95.05 Aligned_cols=38 Identities=32% Similarity=0.506 Sum_probs=34.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
++||+|||||++||+||..|++.|++|+|+|+ ++||.+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~ 38 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQI 38 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCcee
Confidence 47999999999999999999999999999986 467764
No 124
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.79 E-value=1.1e-08 Score=103.89 Aligned_cols=49 Identities=22% Similarity=0.217 Sum_probs=39.0
Q ss_pred HHHHHhh--cCCccccceeEEEEecCCcE-EEEEcCCcEEEcCEEEEecChhh
Q 039105 231 VIKALSK--DIDIRLNQRVTKISNGCNKV-MVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 231 l~~~L~~--gv~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
+.+.+.+ |++| ++++|++|..+++++ .|.+.+|++++||.||+|++...
T Consensus 129 L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s 180 (637)
T 2zxi_A 129 MKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFL 180 (637)
T ss_dssp HHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCB
T ss_pred HHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCc
Confidence 3444443 7888 688999999888776 58889998999999999998643
No 125
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.79 E-value=2.7e-08 Score=101.33 Aligned_cols=39 Identities=31% Similarity=0.445 Sum_probs=34.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
..+||+|||||++||+||+.|++ |.+|+|+||....||.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~ 45 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGS 45 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC--
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCC
Confidence 35899999999999999999999 9999999998877654
No 126
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.79 E-value=1.8e-08 Score=103.30 Aligned_cols=51 Identities=22% Similarity=0.181 Sum_probs=40.1
Q ss_pred HHHHHHh-h-cCCccccceeEEEEecCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 039105 230 PVIKALS-K-DIDIRLNQRVTKISNGCNK--VMVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 230 ~l~~~L~-~-gv~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
.+.+.+. . |++++++ +|++|..++++ +.|++.+|++++||.||.|++....
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 3444443 4 8999999 99999876544 5788888988999999999987663
No 127
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.78 E-value=4e-08 Score=100.49 Aligned_cols=44 Identities=16% Similarity=0.197 Sum_probs=36.7
Q ss_pred hcCCccccceeEEEEecCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 039105 237 KDIDIRLNQRVTKISNGCNK--VMVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
.|++++.+ +|++|..++++ +.|++.+|++++||.||.|++....
T Consensus 178 ~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred CCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 38899999 89999886543 5788888988999999999987664
No 128
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.77 E-value=2.9e-08 Score=100.07 Aligned_cols=44 Identities=34% Similarity=0.477 Sum_probs=39.9
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
|..++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 44568999999999999999999999999999999988998653
No 129
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.77 E-value=1.8e-08 Score=101.22 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=36.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC-----CcEEEEeeCCCCCc
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS-----FKVVLLESRDRLGG 65 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G-----~~V~v~E~~~~~GG 65 (493)
+++||+|||||++||+||..|++.| .+|+|||+++.+|.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~ 72 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRW 72 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCC
Confidence 5689999999999999999999999 99999999988873
No 130
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.76 E-value=3.8e-08 Score=99.98 Aligned_cols=41 Identities=27% Similarity=0.444 Sum_probs=36.5
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
...++||+|||||++|++||.+|+++|++|+|+|+ ++||.+
T Consensus 209 ~~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~ 249 (521)
T 1hyu_A 209 KRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQV 249 (521)
T ss_dssp TSCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGG
T ss_pred ccCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcc
Confidence 45679999999999999999999999999999986 567764
No 131
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.76 E-value=6.8e-08 Score=98.17 Aligned_cols=44 Identities=9% Similarity=0.071 Sum_probs=37.2
Q ss_pred hcCCccccceeEEEEecCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 039105 237 KDIDIRLNQRVTKISNGCNK--VMVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
.|++++++ +|++|+.++++ +.|++.+|++++||.||.|++....
T Consensus 186 ~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 186 RGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp TTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred CCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 38999999 99999885544 6788888988999999999988663
No 132
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.76 E-value=1.8e-08 Score=101.51 Aligned_cols=43 Identities=33% Similarity=0.519 Sum_probs=39.3
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
..++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 3468999999999999999999999999999999988988753
No 133
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.74 E-value=1.3e-07 Score=97.60 Aligned_cols=39 Identities=23% Similarity=0.321 Sum_probs=35.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCCCCCce
Q 039105 28 LPSVIVIGGGISGLAAARILYDAS--FKVVLLESRDRLGGR 66 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~~~GG~ 66 (493)
.+||+|||||++||+||+.|+++| .+|+|+|+....+|.
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~ 45 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSH 45 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCCh
Confidence 589999999999999999999999 999999998766543
No 134
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.72 E-value=7.2e-08 Score=94.83 Aligned_cols=43 Identities=26% Similarity=0.366 Sum_probs=37.7
Q ss_pred hcCCccccceeEEEEecCCcE-EEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKV-MVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v-~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++++ .|.+.+|+++.+|.||+|++..
T Consensus 197 ~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 197 AGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp TTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 389999999999999877765 5889999999999999999753
No 135
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.72 E-value=7e-08 Score=96.74 Aligned_cols=36 Identities=42% Similarity=0.602 Sum_probs=33.0
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
||+|||||++||+||+.|+++|.+|+|+|+. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCch
Confidence 7999999999999999999999999999998 55554
No 136
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.71 E-value=1.7e-08 Score=102.93 Aligned_cols=40 Identities=25% Similarity=0.365 Sum_probs=35.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC-CCCc
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD-RLGG 65 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~-~~GG 65 (493)
..++||+|||||++|++||+.|++.|.+|+|+|++. .+|+
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 456999999999999999999999999999999974 4553
No 137
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.69 E-value=1e-08 Score=97.17 Aligned_cols=40 Identities=30% Similarity=0.465 Sum_probs=37.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.|||+|||||+|||+||.+|++.|++|+|+|+ +.+||.|.
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~ 45 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMA 45 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeee
Confidence 69999999999999999999999999999998 57888764
No 138
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.69 E-value=4e-08 Score=101.62 Aligned_cols=39 Identities=18% Similarity=0.314 Sum_probs=35.2
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
..++||+|||||++||+||+.|++. |++|+|||+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 4568999999999999999999998 89999999987654
No 139
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.69 E-value=1.1e-07 Score=97.03 Aligned_cols=51 Identities=10% Similarity=0.029 Sum_probs=39.0
Q ss_pred HHHHHHh--hcCCccccceeEEEEecCCc--EEEEEcCCcEEEcCEEEEecChhhh
Q 039105 230 PVIKALS--KDIDIRLNQRVTKISNGCNK--VMVTVEDGRNFVADAAIVTVPLGIL 281 (493)
Q Consensus 230 ~l~~~L~--~gv~i~~~~~V~~I~~~~~~--v~V~~~~G~~~~ad~VI~a~~~~~l 281 (493)
.+.+.+. .|++++++ +|++|+.++++ +.|++.+|++++||.||.|++....
T Consensus 180 ~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 180 LLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3444444 38999999 69999876543 4678888778999999999988664
No 140
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.67 E-value=1.1e-07 Score=95.06 Aligned_cols=41 Identities=29% Similarity=0.357 Sum_probs=37.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 3589999999999999999999999999999997 7888753
No 141
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.63 E-value=6.8e-08 Score=96.50 Aligned_cols=36 Identities=19% Similarity=0.457 Sum_probs=33.7
Q ss_pred CcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
+||+|||||++||+||+.|++. |++|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 6999999999999999999998 89999999988665
No 142
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.63 E-value=1.4e-07 Score=94.65 Aligned_cols=40 Identities=25% Similarity=0.354 Sum_probs=36.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 479999999999999999999999999999997 7787653
No 143
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.62 E-value=8.4e-07 Score=92.32 Aligned_cols=36 Identities=33% Similarity=0.481 Sum_probs=33.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHH---h-CCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILY---D-ASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~---~-~G~~V~v~E~~~~ 62 (493)
..+||+|||||+|||+||+.|+ + +|.+|+|+||...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 4689999999999999999999 6 8999999999865
No 144
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.58 E-value=1.4e-07 Score=91.98 Aligned_cols=39 Identities=18% Similarity=0.387 Sum_probs=34.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
.++.+|+|||||+||++||..|.+.+.+|+|+|+.+.++
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~ 45 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP 45 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC
Confidence 467899999999999999999977799999999976543
No 145
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.57 E-value=8.9e-07 Score=91.87 Aligned_cols=37 Identities=19% Similarity=0.265 Sum_probs=33.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC------CCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA------SFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~------G~~V~v~E~~~~~G 64 (493)
.+||+|||||+|||+||+.|+++ |.+|+|+||....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 58999999999999999999997 99999999976543
No 146
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.57 E-value=1.7e-07 Score=92.35 Aligned_cols=51 Identities=24% Similarity=0.128 Sum_probs=37.9
Q ss_pred ccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHhCCCCcccccchh
Q 039105 425 PLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQPGNLEKLQLVT 476 (493)
Q Consensus 425 ~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~~~~~~~~~~~~~ 476 (493)
..+|+|.+||.++...+.....|...|..+|+.|...+... .++..++|..
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l~~~-~~~~~~~~~~ 348 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVP-TKVDKYYPTI 348 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHTTCC-CCCCCCCCCC
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHhcCC-CCccccCCEE
Confidence 57999999999874334567789999999999999988332 3345566643
No 147
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.53 E-value=1.6e-07 Score=94.40 Aligned_cols=37 Identities=27% Similarity=0.350 Sum_probs=31.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
++||+|||||++||+||+.|+++ |++|+|||+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc
Confidence 47999999999999999999998 89999999987654
No 148
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.52 E-value=7.7e-08 Score=93.22 Aligned_cols=40 Identities=30% Similarity=0.437 Sum_probs=36.0
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
|.+++||+|||||++|+++|++|+++|++|+|+|++...+
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~ 42 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPED 42 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCC
Confidence 5677999999999999999999999999999999976433
No 149
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.52 E-value=5.4e-08 Score=98.33 Aligned_cols=42 Identities=31% Similarity=0.412 Sum_probs=38.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++||+||..|++.|++|+|+|+++.+||.|.
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~ 65 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCL 65 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccc
Confidence 459999999999999999999999999999999999999764
No 150
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.52 E-value=4e-07 Score=90.23 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=32.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~~ 62 (493)
+++||+|||||++|++||..|++.|+ +|+|+|+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 46899999999999999999999998 7999999653
No 151
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.50 E-value=1.2e-07 Score=95.56 Aligned_cols=42 Identities=38% Similarity=0.598 Sum_probs=37.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
..++||+|||||++||+||++|++. ++|+|||+++++||.+.
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW 147 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG
T ss_pred cccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee
Confidence 3467999999999999999999999 99999999999988643
No 152
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.47 E-value=1e-07 Score=94.62 Aligned_cols=37 Identities=38% Similarity=0.696 Sum_probs=33.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHh--CCCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYD--ASFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~--~G~~V~v~E~~~~~G 64 (493)
++||+|||||++||+||++|++ .|++|+|+|+++..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~ 40 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG 40 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCC
Confidence 4799999999999999999999 899999999976443
No 153
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.47 E-value=2.3e-07 Score=95.49 Aligned_cols=37 Identities=19% Similarity=0.411 Sum_probs=33.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
|+||+|||||++||+||++|++. |++|+|+|+++.++
T Consensus 1 M~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~ 39 (565)
T 3ntd_A 1 MKKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS 39 (565)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc
Confidence 47899999999999999999998 78999999987654
No 154
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.45 E-value=3.5e-07 Score=91.26 Aligned_cols=37 Identities=30% Similarity=0.592 Sum_probs=33.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
++||+|||||++||+||+.|++. |++|+|+|+.+.++
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 58999999999999999999997 78999999987654
No 155
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.45 E-value=5.2e-07 Score=88.83 Aligned_cols=40 Identities=23% Similarity=0.379 Sum_probs=34.3
Q ss_pred cCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 238 DIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 238 gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
+++++++++|++|..++. .|.+.+|+++.+|++|+|++..
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 789999999999987654 5677889899999999999854
No 156
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.44 E-value=3.4e-07 Score=92.14 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=32.9
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
++||+|||||++|++||..|++. |.+|+|+|+.+..|
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 57999999999999999999996 89999999976553
No 157
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.43 E-value=1.7e-07 Score=93.14 Aligned_cols=36 Identities=25% Similarity=0.517 Sum_probs=33.2
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHh---CCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYD---ASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~---~G~~V~v~E~~~ 61 (493)
..++||+|||||++||+||..|++ .|++|+|+|+++
T Consensus 2 ~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~ 40 (437)
T 3sx6_A 2 RGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISAND 40 (437)
T ss_dssp TTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSS
T ss_pred CCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCC
Confidence 456899999999999999999999 899999999965
No 158
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.42 E-value=5.2e-07 Score=89.97 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=32.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
+||+|||||++|++||..|++. |++|+|+|+++..|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccC
Confidence 4899999999999999999997 99999999977554
No 159
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.42 E-value=1.4e-07 Score=95.88 Aligned_cols=44 Identities=23% Similarity=0.271 Sum_probs=40.6
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
+..++||+|||||++|++||++|++.|++|+|+|+++.+||.|.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 55679999999999999999999999999999999988999864
No 160
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.42 E-value=1.2e-07 Score=95.14 Aligned_cols=41 Identities=32% Similarity=0.412 Sum_probs=38.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++||+||++|+++|++|+|+|+ +.+||.|.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 368999999999999999999999999999999 88999763
No 161
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.38 E-value=2.1e-07 Score=92.58 Aligned_cols=43 Identities=40% Similarity=0.487 Sum_probs=39.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
...+||+|||||+|||+||+.|+++|++|+|||+.+.+||.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 3568999999999999999999999999999999999998754
No 162
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.37 E-value=2.1e-07 Score=93.47 Aligned_cols=41 Identities=34% Similarity=0.457 Sum_probs=38.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++|++||.+|++.|++|+|+|+++.+||.|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999989999864
No 163
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.36 E-value=3.9e-07 Score=91.94 Aligned_cols=37 Identities=14% Similarity=0.370 Sum_probs=33.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCC---CcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDAS---FKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G---~~V~v~E~~~~~G 64 (493)
++||+|||||++|++||..|++.| .+|+|+|+++.+|
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~ 74 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNIS 74 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCC
Confidence 489999999999999999999988 9999999976543
No 164
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.35 E-value=2.7e-07 Score=92.88 Aligned_cols=40 Identities=33% Similarity=0.366 Sum_probs=36.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
+++||+|||||++||+||++|++.|++|+|+|+++.+||.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~ 41 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGK 41 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCC
Confidence 5799999999999999999999999999999998755554
No 165
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.34 E-value=2.9e-07 Score=92.36 Aligned_cols=43 Identities=30% Similarity=0.385 Sum_probs=38.9
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
|.+++||+|||||++|++||++|++.|++|+|+|++ .+||.|.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 346799999999999999999999999999999997 7898764
No 166
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.34 E-value=1e-06 Score=87.86 Aligned_cols=36 Identities=25% Similarity=0.273 Sum_probs=32.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRLG 64 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~G 64 (493)
+||+|||||++|++||..|++. |.+|+|+|+++.+|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCC
Confidence 5899999999999999999998 99999999976543
No 167
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.34 E-value=2.6e-07 Score=92.50 Aligned_cols=42 Identities=38% Similarity=0.492 Sum_probs=38.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.+++||+|||||++|++||.+|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 45799999999999999999999999999999997 7898764
No 168
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.34 E-value=5.6e-07 Score=90.87 Aligned_cols=40 Identities=23% Similarity=0.152 Sum_probs=30.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCc
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGG 65 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG 65 (493)
.+.+||||||||++||++|..|.++|...+++|+.+..|+
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~ 76 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQ 76 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CC
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCC
Confidence 3568999999999999999999988877777777666554
No 169
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.33 E-value=2.1e-07 Score=93.60 Aligned_cols=43 Identities=35% Similarity=0.499 Sum_probs=38.5
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
+..++||+|||||++||+||..|++.|++|+|+|++ .+||.|.
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~ 59 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCV 59 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccc
Confidence 345799999999999999999999999999999975 7898863
No 170
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.33 E-value=3.7e-06 Score=81.97 Aligned_cols=43 Identities=14% Similarity=0.242 Sum_probs=38.2
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++++.|.+.+|+++++|.||+|++..
T Consensus 200 ~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 200 LGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLR 242 (384)
T ss_dssp TTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCC
Confidence 4889999999999998777788888899899999999999743
No 171
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.32 E-value=2.5e-07 Score=92.32 Aligned_cols=42 Identities=31% Similarity=0.405 Sum_probs=37.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.+++||+|||||++|++||++|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCV 43 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCccc
Confidence 35689999999999999999999999999999996 7899764
No 172
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.30 E-value=2.8e-07 Score=92.60 Aligned_cols=43 Identities=35% Similarity=0.421 Sum_probs=39.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 4 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 4 PIDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 3468999999999999999999999999999999989999764
No 173
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.30 E-value=2.6e-07 Score=89.02 Aligned_cols=37 Identities=24% Similarity=0.334 Sum_probs=33.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCC------CcEEEEeeCCCCCc
Q 039105 29 PSVIVIGGGISGLAAARILYDAS------FKVVLLESRDRLGG 65 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G------~~V~v~E~~~~~GG 65 (493)
+||+|||||++||++|++|+++| ++|+|+|++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCC
Confidence 48999999999999999999998 99999999764433
No 174
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.30 E-value=4e-07 Score=92.50 Aligned_cols=44 Identities=36% Similarity=0.426 Sum_probs=38.2
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC--------CCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD--------RLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~--------~~GG~~~ 68 (493)
+..++||+|||||++||+||..|++.|++|+|+|+.+ .+||.|.
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 80 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCV 80 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccC
Confidence 3456899999999999999999999999999999964 6777653
No 175
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.29 E-value=3.7e-07 Score=91.26 Aligned_cols=41 Identities=32% Similarity=0.437 Sum_probs=38.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 41 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCL 41 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccc
Confidence 37999999999999999999999999999999989999864
No 176
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.28 E-value=3.7e-07 Score=96.05 Aligned_cols=45 Identities=44% Similarity=0.598 Sum_probs=41.4
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeec
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHT 69 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s 69 (493)
...++||+|||||++||+||+.|+++|++|+|+|+++.+||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 456789999999999999999999999999999999999998654
No 177
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.27 E-value=4.7e-06 Score=83.19 Aligned_cols=44 Identities=27% Similarity=0.327 Sum_probs=38.3
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChhh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLGI 280 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~~ 280 (493)
.|++++++++|++|+.+++++.+.+.+|+++.+|.||+|++...
T Consensus 221 ~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEE
T ss_pred CCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCc
Confidence 38899999999999988777888888888999999999997543
No 178
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.27 E-value=2.5e-07 Score=93.33 Aligned_cols=44 Identities=25% Similarity=0.339 Sum_probs=39.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEe--------eCCCCCceee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYD-ASFKVVLLE--------SRDRLGGRIH 68 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E--------~~~~~GG~~~ 68 (493)
|.+++||+|||||++|++||++|++ .|++|+|+| +.+.+||.|.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 5557999999999999999999999 999999999 3578899764
No 179
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.27 E-value=2.8e-07 Score=92.99 Aligned_cols=39 Identities=33% Similarity=0.418 Sum_probs=36.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
++||+|||||++||+||.+|++.|++|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcc
Confidence 589999999999999999999999999999995 589876
No 180
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.26 E-value=5e-07 Score=89.51 Aligned_cols=33 Identities=39% Similarity=0.689 Sum_probs=29.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDAS--FKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~ 61 (493)
++|+|||||.||++||..|++.+ ++|+|+|+++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCC
Confidence 57999999999999999999865 7899999964
No 181
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.26 E-value=4.3e-07 Score=91.60 Aligned_cols=43 Identities=33% Similarity=0.404 Sum_probs=38.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEee--------CCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLES--------RDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~--------~~~~GG~~~ 68 (493)
..++||+|||||++||+||..|++.|++|+|+|+ ...+||.|.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 54 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 54 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeec
Confidence 3569999999999999999999999999999998 556888663
No 182
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.26 E-value=4.9e-07 Score=89.61 Aligned_cols=35 Identities=20% Similarity=0.352 Sum_probs=31.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.++||+|||||++||++|+.|+++|++|+|+|++.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 44799999999999999999999999999999975
No 183
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.25 E-value=4.4e-07 Score=91.28 Aligned_cols=41 Identities=37% Similarity=0.523 Sum_probs=37.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 4689999999999999999999999999999996 7898864
No 184
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.24 E-value=1.2e-06 Score=86.07 Aligned_cols=47 Identities=17% Similarity=0.064 Sum_probs=36.9
Q ss_pred hCccCceEEeeccccC-cCcchhHHHHHHHHHHHHHHHHHHHhCCCCc
Q 039105 423 RAPLGNLFFGGEAVSM-EHQGSVHGAYSAGVMAAQNCQKYLLKQPGNL 469 (493)
Q Consensus 423 ~~~~~~l~~aGd~~~~-~~~g~~egA~~sg~~aa~~i~~~l~~~~~~~ 469 (493)
.+.++|+|.+||.+.. ..+-....|...|..+|+.|++.|..+-+..
T Consensus 283 ~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l~G~~~~~ 330 (401)
T 3vrd_B 283 SSLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALLKGEEPGT 330 (401)
T ss_dssp BSSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred ecCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 3567999999998754 2234677899999999999999998765443
No 185
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.23 E-value=5.2e-07 Score=90.95 Aligned_cols=49 Identities=16% Similarity=0.294 Sum_probs=39.6
Q ss_pred HHHHHh-hcCCccccceeEEEEecCC-cEEEEEcCCcEEEcCEEEEecChh
Q 039105 231 VIKALS-KDIDIRLNQRVTKISNGCN-KVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 231 l~~~L~-~gv~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
+.+.|. .|++|+++++|++|+.+++ .+.|.+.+|+++.+|.||+|++..
T Consensus 237 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 237 LTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp HHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCC
Confidence 444444 4899999999999998654 478888899889999999999743
No 186
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.22 E-value=9.1e-06 Score=80.93 Aligned_cols=43 Identities=16% Similarity=0.239 Sum_probs=36.8
Q ss_pred hcCCccccceeEEEEecCCc-EEEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNK-VMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~-v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.++++ +.|++.+|+++.+|.||+|++..
T Consensus 221 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 221 EGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp HSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEE
T ss_pred CCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCC
Confidence 38899999999999986544 78888899889999999999743
No 187
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.20 E-value=8.3e-07 Score=91.81 Aligned_cols=43 Identities=26% Similarity=0.367 Sum_probs=37.7
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
|...+||+|||||++|++||+.|+++|++|+|+|+.+..||.+
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 3356899999999999999999999999999999999888854
No 188
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.20 E-value=8.8e-07 Score=89.23 Aligned_cols=43 Identities=33% Similarity=0.384 Sum_probs=36.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC---------CCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD---------RLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~---------~~GG~~~ 68 (493)
..++||+|||||++|++||.+|++.|++|+|+|+.. .+||.|.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~ 58 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCV 58 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeec
Confidence 457999999999999999999999999999999521 3777763
No 189
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=5.9e-07 Score=89.77 Aligned_cols=41 Identities=32% Similarity=0.464 Sum_probs=38.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++|++||.+|++.|++|+|+|+ +.+||.|.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 458999999999999999999999999999999 78999874
No 190
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.18 E-value=1e-06 Score=93.15 Aligned_cols=44 Identities=32% Similarity=0.674 Sum_probs=40.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeec
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHT 69 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s 69 (493)
..++||+|||||++||+||+.|+++|++|+|+|+++.+||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 45789999999999999999999999999999999999998754
No 191
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.18 E-value=1.1e-06 Score=85.74 Aligned_cols=35 Identities=31% Similarity=0.482 Sum_probs=32.9
Q ss_pred CcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDA--SFKVVLLESRDRL 63 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~~~ 63 (493)
+||+|||||++||++|+.|+++ |++|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998766
No 192
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.18 E-value=9.1e-06 Score=81.28 Aligned_cols=36 Identities=28% Similarity=0.465 Sum_probs=33.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
..+++|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 204 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEI 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 478999999999999999999999999999996643
No 193
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.17 E-value=6e-07 Score=90.83 Aligned_cols=49 Identities=20% Similarity=0.348 Sum_probs=40.6
Q ss_pred HHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 231 VIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 231 l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
+.+.+. .|++|+++++|++|+.+++++.|.+.+|+++.+|.||+|++..
T Consensus 229 l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 229 LEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCC
Confidence 344444 4899999999999998777788888888899999999999754
No 194
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.17 E-value=1.2e-05 Score=80.37 Aligned_cols=43 Identities=19% Similarity=0.209 Sum_probs=37.6
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCc-EEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGR-NFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~-~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++++.|++.+|+ ++.+|.||+|++..
T Consensus 220 ~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 220 QGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp TTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEE
T ss_pred CCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCC
Confidence 48899999999999987666888889998 89999999999743
No 195
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.17 E-value=1.1e-05 Score=79.39 Aligned_cols=43 Identities=30% Similarity=0.419 Sum_probs=37.4
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.++....|.+.+|+++.+|.||+|++..
T Consensus 198 ~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 198 LGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAE 240 (410)
T ss_dssp HTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEE
T ss_pred CCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCe
Confidence 4899999999999988665557889999999999999999753
No 196
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=1e-06 Score=89.00 Aligned_cols=40 Identities=48% Similarity=0.654 Sum_probs=37.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~ 41 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCV 41 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccc
Confidence 589999999999999999999999999999997 5888764
No 197
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.16 E-value=1.8e-06 Score=82.01 Aligned_cols=39 Identities=31% Similarity=0.385 Sum_probs=35.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCce
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGR 66 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~ 66 (493)
++||+|||||++|+.||+.|+++|++|+|+|++...+.-
T Consensus 1 m~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp 39 (443)
T 3g5s_A 1 MERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTP 39 (443)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCS
T ss_pred CCCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCc
Confidence 479999999999999999999999999999998765544
No 198
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.15 E-value=1.1e-06 Score=87.95 Aligned_cols=39 Identities=33% Similarity=0.437 Sum_probs=36.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCcee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRI 67 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~ 67 (493)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCC
Confidence 5899999999999999999999999999999977 88876
No 199
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.14 E-value=6.9e-06 Score=81.39 Aligned_cols=35 Identities=17% Similarity=0.429 Sum_probs=30.7
Q ss_pred CcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDAS--FKVVLLESRDRL 63 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~~~ 63 (493)
.+|+|||||+||++||..|++.| .+|+|+|+++..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 36999999999999999999988 469999997643
No 200
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.09 E-value=2.6e-05 Score=77.12 Aligned_cols=43 Identities=33% Similarity=0.383 Sum_probs=36.7
Q ss_pred hcCCccccceeEEEEe--cCCcE-EEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISN--GCNKV-MVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~--~~~~v-~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|.. +++++ .|.+.+|+++.+|.||+|++..
T Consensus 204 ~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 204 AGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp HTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 3889999999999987 55665 6888899899999999999743
No 201
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=1.5e-05 Score=79.56 Aligned_cols=37 Identities=30% Similarity=0.466 Sum_probs=33.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 205 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEI 205 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 3578999999999999999999999999999997644
No 202
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.08 E-value=1.8e-05 Score=78.82 Aligned_cols=37 Identities=35% Similarity=0.520 Sum_probs=33.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||.+|+.+|..|++.|.+|+|+|+.+++
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 184 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRP 184 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccc
Confidence 5689999999999999999999999999999997644
No 203
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.07 E-value=2.3e-05 Score=78.67 Aligned_cols=42 Identities=14% Similarity=0.224 Sum_probs=35.6
Q ss_pred hcCCccccceeEEEEecCCc--EEEEEcCC-cEEEcCEEEEecCh
Q 039105 237 KDIDIRLNQRVTKISNGCNK--VMVTVEDG-RNFVADAAIVTVPL 278 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~--v~V~~~~G-~~~~ad~VI~a~~~ 278 (493)
.|++++++++|++|+.++++ +.|.+.+| +++.+|.||+|++.
T Consensus 239 ~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 239 EGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp HTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred CCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCC
Confidence 38999999999999876544 77888899 78999999999974
No 204
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.07 E-value=2.6e-05 Score=78.77 Aligned_cols=37 Identities=22% Similarity=0.403 Sum_probs=33.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||+|..|+-.|..|++.|.+|+|+|+.+++
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 217 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHV 217 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 3478999999999999999999999999999997654
No 205
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.07 E-value=2.9e-06 Score=89.00 Aligned_cols=43 Identities=26% Similarity=0.424 Sum_probs=39.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
..++||+|||||+|||+||..|++.|++|+|+|+++.+||.+.
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 4578999999999999999999999999999999999998754
No 206
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.04 E-value=2.3e-06 Score=86.66 Aligned_cols=46 Identities=11% Similarity=0.142 Sum_probs=40.1
Q ss_pred HHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecC
Q 039105 232 IKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVP 277 (493)
Q Consensus 232 ~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~ 277 (493)
.+.|. +|+++++++.|++++..++++.|.+.++.++.+|.|++|++
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvG 316 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIG 316 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSC
T ss_pred HHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEccc
Confidence 33343 48999999999999999999999999998999999999996
No 207
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.04 E-value=3.4e-05 Score=75.66 Aligned_cols=38 Identities=32% Similarity=0.560 Sum_probs=34.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
....+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 143 ~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 143 RPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred hcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 34678999999999999999999999999999997643
No 208
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.03 E-value=2e-05 Score=79.14 Aligned_cols=36 Identities=28% Similarity=0.471 Sum_probs=33.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
..+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 218 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQI 218 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcc
Confidence 578999999999999999999999999999997654
No 209
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.02 E-value=3.2e-05 Score=77.84 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=33.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 209 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSV 209 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCC
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcc
Confidence 3578999999999999999999999999999997653
No 210
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.01 E-value=2.7e-06 Score=92.61 Aligned_cols=42 Identities=38% Similarity=0.590 Sum_probs=39.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||+|||+||..|++.|++|+|||+++.+||.+.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 468999999999999999999999999999999999999887
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.01 E-value=3.4e-05 Score=76.80 Aligned_cols=42 Identities=14% Similarity=0.310 Sum_probs=36.6
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++|+++++|++|+.+++++.|.+++| ++.+|.||+|++..
T Consensus 202 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 202 QAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLH 243 (452)
T ss_dssp TTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCB
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCC
Confidence 4889999999999998777788888777 89999999999743
No 212
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.00 E-value=3.9e-06 Score=92.01 Aligned_cols=41 Identities=17% Similarity=0.460 Sum_probs=38.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~~~GG~~~ 68 (493)
.+||+|||||+|||+||+.|++.|+ +|+|||+.+.+||.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~ 228 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST 228 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc
Confidence 5799999999999999999999999 7999999999999753
No 213
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.00 E-value=3.2e-05 Score=77.49 Aligned_cols=43 Identities=21% Similarity=0.374 Sum_probs=38.2
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++++.|.+.+|+++.+|.||+|++..
T Consensus 215 ~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 215 NDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp TTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEE
T ss_pred cCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCC
Confidence 3889999999999998788888888899899999999999743
No 214
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=3.8e-05 Score=77.51 Aligned_cols=43 Identities=23% Similarity=0.251 Sum_probs=36.4
Q ss_pred hcCCccccceeEEEEecCC-cEEEEEcCCcE-EEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCN-KVMVTVEDGRN-FVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~-~v~V~~~~G~~-~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++ .+.|.+.+|++ +.+|.||+|++..
T Consensus 230 ~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 230 NNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp TTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBC
T ss_pred CCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCC
Confidence 4889999999999987654 47888889987 9999999999743
No 215
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.99 E-value=2e-05 Score=79.19 Aligned_cols=43 Identities=21% Similarity=0.169 Sum_probs=36.1
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcC----CcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVED----GRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~----G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++++.|++.+ |+++.+|.||+|++..
T Consensus 239 ~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 239 RFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp GEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEE
T ss_pred cCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCC
Confidence 488999999999999877777777766 7789999999999743
No 216
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.99 E-value=3.1e-05 Score=78.64 Aligned_cols=42 Identities=19% Similarity=0.311 Sum_probs=36.1
Q ss_pred hcCCccccceeEEEEecCCc----EEEEEcCCc-EEEcCEEEEecCh
Q 039105 237 KDIDIRLNQRVTKISNGCNK----VMVTVEDGR-NFVADAAIVTVPL 278 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~----v~V~~~~G~-~~~ad~VI~a~~~ 278 (493)
.|++|+++++|++|+.++++ +.|.+.+|+ ++.+|.||+|++.
T Consensus 268 ~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 268 QGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGE 314 (523)
T ss_dssp TTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCC
T ss_pred CCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCC
Confidence 48999999999999986554 678888887 8999999999974
No 217
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.99 E-value=3.6e-05 Score=77.18 Aligned_cols=36 Identities=19% Similarity=0.324 Sum_probs=33.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
..+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCcc
Confidence 478999999999999999999999999999997654
No 218
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.98 E-value=2.8e-06 Score=84.55 Aligned_cols=41 Identities=27% Similarity=0.276 Sum_probs=38.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHh-C------CCcEEEEeeCCCCCceee
Q 039105 28 LPSVIVIGGGISGLAAARILYD-A------SFKVVLLESRDRLGGRIH 68 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~-~------G~~V~v~E~~~~~GG~~~ 68 (493)
++||+|||||++|++||..|++ . |++|+|||+.+.+||.++
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 5799999999999999999999 7 999999999989998874
No 219
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.96 E-value=4.5e-05 Score=76.27 Aligned_cols=37 Identities=24% Similarity=0.352 Sum_probs=33.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 206 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRA 206 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcc
Confidence 3578999999999999999999999999999996543
No 220
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.96 E-value=4.2e-06 Score=86.60 Aligned_cols=34 Identities=35% Similarity=0.401 Sum_probs=32.5
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEee
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLES 59 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~ 59 (493)
..++||+|||||+|||+||.+|++.|++|+|+|+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~ 138 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDY 138 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEec
Confidence 5679999999999999999999999999999998
No 221
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.96 E-value=4.6e-05 Score=76.78 Aligned_cols=42 Identities=24% Similarity=0.366 Sum_probs=36.5
Q ss_pred hcCCccccceeEEEEecCC-cEEEEEcCCcEEEcCEEEEecCh
Q 039105 237 KDIDIRLNQRVTKISNGCN-KVMVTVEDGRNFVADAAIVTVPL 278 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~-~v~V~~~~G~~~~ad~VI~a~~~ 278 (493)
.|++|+++++|++|+.+++ .+.|++.+|+++.+|.||+|++.
T Consensus 248 ~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 248 NGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGR 290 (495)
T ss_dssp TTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCE
T ss_pred CCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCC
Confidence 4899999999999988654 47888889989999999999964
No 222
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.96 E-value=4.1e-05 Score=77.06 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=33.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhC---CCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDA---SFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~---G~~V~v~E~~~~~ 63 (493)
...+++|||||..|+-+|..|++. |.+|+|+|+.+++
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~ 225 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMI 225 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCc
Confidence 356899999999999999999999 9999999997654
No 223
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.95 E-value=4.7e-05 Score=75.79 Aligned_cols=36 Identities=22% Similarity=0.489 Sum_probs=32.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+++|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 183 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHER 183 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 457899999999999999999999999999999654
No 224
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=2.1e-05 Score=78.54 Aligned_cols=37 Identities=27% Similarity=0.481 Sum_probs=33.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 3578999999999999999999999999999997643
No 225
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.92 E-value=5.5e-06 Score=82.52 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=38.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCCCCCceee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS--FKVVLLESRDRLGGRIH 68 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~~~GG~~~ 68 (493)
.++||+|||||++|++||..|++.| ++|+|||+.+.+||..+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 4689999999999999999999998 99999999999988754
No 226
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.92 E-value=5.6e-05 Score=75.64 Aligned_cols=37 Identities=27% Similarity=0.435 Sum_probs=33.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 209 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRC 209 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcc
Confidence 4578999999999999999999999999999996543
No 227
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.90 E-value=7.9e-05 Score=76.48 Aligned_cols=36 Identities=33% Similarity=0.515 Sum_probs=32.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+++|||||.+|+-+|..|++.|.+|+++|+.++
T Consensus 150 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 185 (565)
T 3ntd_A 150 NVEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQ 185 (565)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCc
Confidence 456899999999999999999999999999999653
No 228
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.89 E-value=7.4e-05 Score=75.18 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=33.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
....+|+|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 192 ~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 229 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTC 229 (490)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccch
Confidence 35678999999999999999999999999999996543
No 229
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.87 E-value=9.3e-06 Score=79.08 Aligned_cols=36 Identities=19% Similarity=0.424 Sum_probs=31.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDAS--FKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~ 61 (493)
.+++||+|||||++|++||..|++.| .+|+|+|++.
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 35689999999999999999999998 5689999864
No 230
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.86 E-value=7.5e-06 Score=82.48 Aligned_cols=49 Identities=18% Similarity=0.391 Sum_probs=40.7
Q ss_pred HHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 231 VIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 231 l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
+.+.+. .|++++++++|++|+.+++.+.|.+.+|+++.+|.||+|++..
T Consensus 232 ~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 232 TMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCC
Confidence 344444 4899999999999988777778888999999999999999754
No 231
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.86 E-value=4.7e-05 Score=76.23 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=33.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 212 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEI 212 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcc
Confidence 3578999999999999999999999999999996543
No 232
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.81 E-value=9.4e-05 Score=74.42 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=30.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHh----CCCcEEEEeeCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYD----ASFKVVLLESRDR 62 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~----~G~~V~v~E~~~~ 62 (493)
..+|+|||||..|+-+|..|++ .|.+|+++++.++
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~ 218 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKG 218 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcc
Confidence 4789999999999999999987 4788999998653
No 233
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.81 E-value=1e-05 Score=82.30 Aligned_cols=36 Identities=25% Similarity=0.484 Sum_probs=31.7
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYD-ASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E~~~ 61 (493)
.+.||+||||||.||+..|.+|++ .|++|+||||..
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 457999999999999999999998 689999999953
No 234
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.80 E-value=0.00012 Score=73.28 Aligned_cols=43 Identities=28% Similarity=0.276 Sum_probs=35.8
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCC---cEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDG---RNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G---~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++++.+.+.++ +++.+|.||+|++..
T Consensus 234 ~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 234 QGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp TTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEE
T ss_pred CCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCc
Confidence 3789999999999998887777776654 578999999999743
No 235
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.80 E-value=1.6e-05 Score=78.15 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=34.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESRDRLG 64 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~~~G 64 (493)
.++||+|||||++|++||..|++.|+ +|+|+|+.+.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 56899999999999999999999998 499999987654
No 236
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.79 E-value=1.5e-05 Score=81.40 Aligned_cols=37 Identities=35% Similarity=0.434 Sum_probs=34.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
..+|+||||||.+|+++|++|+++|++|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 5699999999999999999999999999999997643
No 237
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.78 E-value=0.00013 Score=72.81 Aligned_cols=42 Identities=12% Similarity=0.192 Sum_probs=35.1
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|+.+++.+.|.++ +.++.+|.||+|++..
T Consensus 229 ~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 229 EGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRT 270 (467)
T ss_dssp TTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEE
T ss_pred CCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCC
Confidence 48899999999999987766777776 4579999999999754
No 238
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.77 E-value=9.5e-05 Score=74.46 Aligned_cols=37 Identities=32% Similarity=0.496 Sum_probs=33.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 233 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTI 233 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccc
Confidence 4578999999999999999999999999999996543
No 239
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.77 E-value=8.7e-05 Score=74.44 Aligned_cols=36 Identities=33% Similarity=0.554 Sum_probs=33.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 220 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDH 220 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 468899999999999999999999999999999654
No 240
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.77 E-value=0.00014 Score=72.63 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=35.7
Q ss_pred hcCCccccceeEEEEecCCc-EEEE-EcCCcEEEcCEEEEecCh
Q 039105 237 KDIDIRLNQRVTKISNGCNK-VMVT-VEDGRNFVADAAIVTVPL 278 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~-v~V~-~~~G~~~~ad~VI~a~~~ 278 (493)
.|++|+++++|++|+.++++ +.|. +.+|+ +.+|.||+|++.
T Consensus 224 ~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 224 KGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGR 266 (463)
T ss_dssp TTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCE
T ss_pred CCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCc
Confidence 38899999999999987555 6788 88997 999999999974
No 241
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.74 E-value=0.00017 Score=73.04 Aligned_cols=34 Identities=15% Similarity=0.271 Sum_probs=31.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-+.+++|||||..|+=.|..+++.|.+|+|+++.
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 3467999999999999999999999999999874
No 242
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.74 E-value=8.6e-06 Score=82.80 Aligned_cols=39 Identities=28% Similarity=0.464 Sum_probs=34.5
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
....+|+||||||.||+++|.+|++ |.+|+|+||....+
T Consensus 23 ~~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~ 61 (536)
T 1ju2_A 23 LEGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPT 61 (536)
T ss_dssp SEEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGG
T ss_pred ccCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcC
Confidence 3456999999999999999999999 99999999975543
No 243
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.69 E-value=0.00018 Score=74.22 Aligned_cols=36 Identities=28% Similarity=0.458 Sum_probs=32.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 221 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQ 221 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCc
Confidence 357899999999999999999999999999999654
No 244
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.6e-05 Score=75.31 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...|++|||||+||++||..|++.| +|+|+|+.+..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 4579999999999999999999999 99999997643
No 245
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.65 E-value=0.00023 Score=70.76 Aligned_cols=36 Identities=25% Similarity=0.505 Sum_probs=33.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+++|||+|..|+-+|..|++.|.+|+|+|+.++
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 182 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGER 182 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCc
Confidence 457899999999999999999999999999999654
No 246
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.64 E-value=0.00028 Score=70.74 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=32.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
..+++|||||.+|+-+|..|++.|.+|+|+++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 221 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDK 221 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCc
Confidence 47899999999999999999999999999999654
No 247
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.64 E-value=3.3e-05 Score=77.97 Aligned_cols=38 Identities=24% Similarity=0.309 Sum_probs=34.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
..+|++|||||++|+++|++|++.|++|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46899999999999999999999999999999977554
No 248
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.63 E-value=2.6e-05 Score=79.58 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=33.4
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDAS-FKVVLLESRDR 62 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~~ 62 (493)
.+.||+||||||.||+++|.+|++.| ++|+|+||...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999997 79999999654
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.61 E-value=0.00029 Score=70.36 Aligned_cols=36 Identities=28% Similarity=0.421 Sum_probs=32.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.++
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~ 206 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDR 206 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCc
Confidence 357899999999999999999999999999999654
No 250
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.59 E-value=0.00018 Score=69.37 Aligned_cols=35 Identities=34% Similarity=0.548 Sum_probs=32.3
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
.+++|||||.+|+-+|..|++.|.+|+|+|+.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 178 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMF 178 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCee
Confidence 68999999999999999999999999999996543
No 251
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.54 E-value=4.2e-05 Score=78.05 Aligned_cols=36 Identities=33% Similarity=0.611 Sum_probs=32.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDA-SFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~-G~~V~v~E~~~ 61 (493)
.+.||+||||||.||+++|.+|++. |++|+|+||..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 4579999999999999999999975 89999999965
No 252
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.52 E-value=5.9e-05 Score=76.15 Aligned_cols=38 Identities=29% Similarity=0.344 Sum_probs=34.6
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
+..++|++|||||.+|+++|++|++.|++|+|+|+...
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 34679999999999999999999999999999999754
No 253
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.51 E-value=0.0006 Score=64.18 Aligned_cols=35 Identities=34% Similarity=0.456 Sum_probs=32.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 45789999999999999999999999999999854
No 254
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.51 E-value=0.00068 Score=67.98 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=30.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEee
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLES 59 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~ 59 (493)
...+++|||||..|+-+|..|++.|.+|+|+++
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~ 218 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVR 218 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEES
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeC
Confidence 346799999999999999999999999999998
No 255
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.50 E-value=0.00042 Score=68.46 Aligned_cols=37 Identities=24% Similarity=0.533 Sum_probs=33.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
+..+++|||||..|+-+|..|++.|.+|+|+|+.+++
T Consensus 146 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 146 QVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred CCcEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 4578999999999999999999999999999996543
No 256
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.47 E-value=0.00014 Score=72.52 Aligned_cols=43 Identities=14% Similarity=0.150 Sum_probs=36.2
Q ss_pred hcCCccccceeEEEEecCCcEEEEEc---CCcE--EEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVE---DGRN--FVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~---~G~~--~~ad~VI~a~~~~ 279 (493)
.|++|+++++|++|+.+++++.|++. +|+. +.+|.||+|++..
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 37899999999999988888777765 6764 8999999999854
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.46 E-value=6.9e-05 Score=75.46 Aligned_cols=37 Identities=16% Similarity=0.457 Sum_probs=33.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
+++++|||||||.||++||..|++.+++|+|+|+++.
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 4567899999999999999999999999999999763
No 258
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.42 E-value=0.00083 Score=62.91 Aligned_cols=35 Identities=34% Similarity=0.444 Sum_probs=32.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 45789999999999999999999999999999854
No 259
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.42 E-value=5.5e-05 Score=77.03 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=32.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeeCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYD-ASFKVVLLESRDRL 63 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E~~~~~ 63 (493)
.||+||||||.||+++|.+|++ .|++|+|+||....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999999 69999999996544
No 260
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.42 E-value=9.7e-05 Score=75.24 Aligned_cols=37 Identities=32% Similarity=0.391 Sum_probs=33.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDA-SFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~-G~~V~v~E~~~~~ 63 (493)
..+|++|||||.+|+++|++|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 569999999999999999999998 8999999997554
No 261
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.40 E-value=0.00063 Score=64.51 Aligned_cols=35 Identities=34% Similarity=0.419 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~ 206 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD 206 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 45789999999999999999999999999999854
No 262
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.40 E-value=0.001 Score=66.73 Aligned_cols=34 Identities=18% Similarity=0.270 Sum_probs=31.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
...+++|||||..|+-+|..|++.|.+|+|+++.
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRS 217 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcC
Confidence 3467999999999999999999999999999984
No 263
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.39 E-value=0.00011 Score=75.54 Aligned_cols=37 Identities=30% Similarity=0.445 Sum_probs=33.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYD-ASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E~~~~~ 63 (493)
..+|++|||||.+|+++|.+|++ .|++|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 56999999999999999999999 79999999996543
No 264
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.35 E-value=0.0011 Score=62.77 Aligned_cols=35 Identities=29% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~ 185 (335)
T 2zbw_A 151 QGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP 185 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC
Confidence 35789999999999999999999999999999854
No 265
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.33 E-value=0.0011 Score=62.03 Aligned_cols=35 Identities=43% Similarity=0.371 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 143 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 143 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 45789999999999999999999999999999854
No 266
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.32 E-value=0.0013 Score=62.03 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 151 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 151 KGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 45789999999999999999999999999999854
No 267
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.32 E-value=0.00089 Score=64.41 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=30.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
+..+|+|||+|.+|+-+|..|++.|.+|+++|+.+.
T Consensus 165 ~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 165 NKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 346899999999999999999999999999999643
No 268
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.25 E-value=0.0018 Score=65.62 Aligned_cols=36 Identities=19% Similarity=0.157 Sum_probs=33.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999764
No 269
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.25 E-value=0.0015 Score=61.34 Aligned_cols=35 Identities=31% Similarity=0.344 Sum_probs=31.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+++|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 154 ~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 154 KGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp BTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 35789999999999999999999999999999854
No 270
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.19 E-value=0.0017 Score=60.95 Aligned_cols=36 Identities=47% Similarity=0.485 Sum_probs=32.5
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
....+++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 152 ~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 152 FKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp GTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 345789999999999999999999999999999854
No 271
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.16 E-value=0.0014 Score=61.91 Aligned_cols=34 Identities=29% Similarity=0.381 Sum_probs=31.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..+++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~ 187 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD 187 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC
Confidence 5689999999999999999999999999999854
No 272
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.15 E-value=0.0023 Score=65.03 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=33.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
..++|+|||+|.+|+-+|..|++.+.+|+|+++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 457899999999999999999999999999999764
No 273
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.11 E-value=0.0012 Score=63.38 Aligned_cols=35 Identities=26% Similarity=0.303 Sum_probs=31.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 162 ~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 162 KGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp TTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 34689999999999999999999999999999864
No 274
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.07 E-value=0.0032 Score=59.45 Aligned_cols=35 Identities=34% Similarity=0.467 Sum_probs=32.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 45789999999999999999999999999999964
No 275
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.03 E-value=0.0015 Score=65.75 Aligned_cols=42 Identities=19% Similarity=0.193 Sum_probs=32.0
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCCc----EEEcCEEEEecCh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDGR----NFVADAAIVTVPL 278 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G~----~~~ad~VI~a~~~ 278 (493)
.|++|++|++|++|+.++..+.+...+|+ ++.+|.||+|++.
T Consensus 285 ~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 285 TSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred cceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 38999999999999754433445556664 5899999999863
No 276
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.01 E-value=0.0044 Score=62.63 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=30.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEee
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLES 59 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~ 59 (493)
..+++|||||..|+-.|..|++.|.+|+|+++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~ 241 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVR 241 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEec
Confidence 45699999999999999999999999999998
No 277
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.98 E-value=0.0059 Score=62.90 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=31.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
...+++|||||.+|+-+|..|++.|.+|+|+|+.
T Consensus 285 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 285 FPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 3457999999999999999999999999999984
No 278
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.96 E-value=0.002 Score=60.20 Aligned_cols=35 Identities=34% Similarity=0.469 Sum_probs=32.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+++|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 45789999999999999999999999999999854
No 279
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.93 E-value=0.0019 Score=67.69 Aligned_cols=39 Identities=15% Similarity=0.209 Sum_probs=34.2
Q ss_pred CCCCCcEEEEC--cCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 25 IGSLPSVIVIG--GGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 25 ~~~~~dv~IIG--aGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
.....+|+||| +|.+|+-+|..|++.|.+|+++++.+.+
T Consensus 520 ~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l 560 (690)
T 3k30_A 520 LPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQV 560 (690)
T ss_dssp CCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccc
Confidence 44556799999 9999999999999999999999996654
No 280
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=96.92 E-value=0.0029 Score=59.92 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=32.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-.|..|++.|.+|+++++.+
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 45789999999999999999999999999999854
No 281
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.87 E-value=0.0037 Score=63.17 Aligned_cols=35 Identities=43% Similarity=0.371 Sum_probs=31.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|++.|.+|+++|+.+
T Consensus 354 ~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~ 388 (521)
T 1hyu_A 354 KGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 388 (521)
T ss_dssp BTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc
Confidence 35789999999999999999999999999999854
No 282
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.68 E-value=0.0055 Score=56.67 Aligned_cols=39 Identities=26% Similarity=0.327 Sum_probs=33.0
Q ss_pred ccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHhC
Q 039105 425 PLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLKQ 465 (493)
Q Consensus 425 ~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~~ 465 (493)
..+|+|.+||+... +..+..|+..|..||..|.+.|...
T Consensus 256 ~~~~vya~GD~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~ 294 (297)
T 3fbs_A 256 TARGIFACGDVARP--AGSVALAVGDGAMAGAAAHRSILFP 294 (297)
T ss_dssp SSTTEEECSGGGCT--TCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCEEEEeecCCc--hHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 45799999999763 5678899999999999999988754
No 283
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.26 E-value=0.003 Score=61.14 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=33.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
..+|+|||||.+|+-+|..|++.|.+|+|+|+.+++.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccc
Confidence 3689999999999999999999999999999987653
No 284
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.24 E-value=0.0037 Score=58.50 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=32.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
..++++|||||..|+-+|..|++.|.+|+|+|+.++
T Consensus 144 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 144 KNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 346899999999999999999999999999999654
No 285
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.17 E-value=0.0098 Score=62.69 Aligned_cols=37 Identities=14% Similarity=0.080 Sum_probs=33.0
Q ss_pred CCCCCcEEEEC--cCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 25 IGSLPSVIVIG--GGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 25 ~~~~~dv~IIG--aGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.....+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 525 ~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 525 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 34567899999 99999999999999999999999954
No 286
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.04 E-value=0.0067 Score=48.99 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=30.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.++|+|||+|..|...|..|.+.|++|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999853
No 287
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.99 E-value=0.0089 Score=48.49 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+.+|+|||+|-.|...|..|.+.|++|+++|++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999999999999964
No 288
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=95.95 E-value=0.025 Score=61.55 Aligned_cols=35 Identities=17% Similarity=0.120 Sum_probs=31.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|+|||+|..|+-+|..|++.|.+|+|+|+.+
T Consensus 283 ~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 283 AGARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 34689999999999999999999999999999954
No 289
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.95 E-value=0.0084 Score=49.62 Aligned_cols=35 Identities=17% Similarity=0.340 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 45679999999999999999999999999999864
No 290
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.92 E-value=0.0093 Score=48.37 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
++.+++|+|+|-.|...|..|.++|++|.++|+++
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34679999999999999999999999999999864
No 291
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.92 E-value=0.0078 Score=59.33 Aligned_cols=36 Identities=19% Similarity=0.385 Sum_probs=32.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
.++|+|||.|.+|+++|..|+++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 467999999999999999999999999999997654
No 292
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.91 E-value=0.0073 Score=47.08 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=31.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS-FKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~ 61 (493)
++.+|+|+|+|..|...|..|.+.| ++|.+++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 3568999999999999999999999 8999999853
No 293
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.73 E-value=0.0084 Score=56.00 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+++|||||..|+-+|..|++.|.+|+|+|+.+
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 45789999999999999999999999999999843
No 294
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.61 E-value=0.009 Score=59.06 Aligned_cols=35 Identities=31% Similarity=0.330 Sum_probs=32.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.++|+|||.|.+|+++|..|.++|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 45789999999999999999999999999999964
No 295
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.42 E-value=0.054 Score=56.51 Aligned_cols=40 Identities=13% Similarity=0.257 Sum_probs=31.5
Q ss_pred hcCCccccceeEEEEecCCcEEEEEcCC--cEEEcCEEEEecChh
Q 039105 237 KDIDIRLNQRVTKISNGCNKVMVTVEDG--RNFVADAAIVTVPLG 279 (493)
Q Consensus 237 ~gv~i~~~~~V~~I~~~~~~v~V~~~~G--~~~~ad~VI~a~~~~ 279 (493)
.|++++++++|++|.. +++.+. .+| +++.+|.||+|++..
T Consensus 586 ~GV~v~~~~~v~~i~~--~~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 586 RGVKMIPGVSYQKIDD--DGLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp TTCEEECSCEEEEEET--TEEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred cCCEEEeCcEEEEEeC--CeEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 4899999999999973 345554 577 578999999999754
No 296
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.34 E-value=0.018 Score=46.65 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=30.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|+|+|+|-.|...|..|.+.|++|.+++++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 457999999999999999999999999999985
No 297
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.23 E-value=0.027 Score=46.32 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=30.9
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+++|+|+|-.|...|..|.+.|++|+++|++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 457999999999999999999999999999995
No 298
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.16 E-value=0.021 Score=52.57 Aligned_cols=34 Identities=24% Similarity=0.283 Sum_probs=31.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+..+|+|||+|.-|...|..|+++|++|.+++++
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDIN 36 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3568999999999999999999999999999984
No 299
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.08 E-value=0.02 Score=53.25 Aligned_cols=34 Identities=24% Similarity=0.473 Sum_probs=30.9
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..+|+|||||.-|-.-|..++.+|++|.|+|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999853
No 300
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.07 E-value=0.023 Score=52.88 Aligned_cols=33 Identities=33% Similarity=0.577 Sum_probs=30.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|.|||+|.-|...|..|+++|++|++++++
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 467999999999999999999999999999984
No 301
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.76 E-value=0.028 Score=47.84 Aligned_cols=34 Identities=24% Similarity=0.236 Sum_probs=31.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC-CCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA-SFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~-G~~V~v~E~~~ 61 (493)
..+|+|||+|..|...|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45799999999999999999999 99999999864
No 302
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.74 E-value=0.027 Score=55.66 Aligned_cols=37 Identities=32% Similarity=0.563 Sum_probs=33.8
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhC-CC-cEEEEeeCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDA-SF-KVVLLESRDR 62 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~-G~-~V~v~E~~~~ 62 (493)
.+..+|+|||+|.-|+..|..|+++ |+ +|++++++..
T Consensus 16 ~~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4567899999999999999999999 99 9999998765
No 303
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.68 E-value=0.032 Score=52.49 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=30.9
Q ss_pred CCCcEEEECcCHHHHH-HHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLA-AARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLs-aA~~L~~~G~~V~v~E~~~ 61 (493)
.+++|.|||.|-+|++ +|..|.++|++|++.|++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3568999999999997 7888899999999999954
No 304
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.63 E-value=0.031 Score=53.16 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=31.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|+|||+|.-|.+.|..|+++|++|.+++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 468999999999999999999999999999985
No 305
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.59 E-value=0.031 Score=55.49 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=32.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
...+|+|||+|.+|+=.|..|++.|.+|+|+++.+.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 457899999999999999999999999999998654
No 306
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.56 E-value=0.033 Score=52.08 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=30.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+..+|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999999999999999999999999999985
No 307
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.53 E-value=0.038 Score=53.94 Aligned_cols=37 Identities=41% Similarity=0.557 Sum_probs=34.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
..+++|||+|..|+-+|..|.+.|.+|+++|+.+++-
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l 188 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL 188 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh
Confidence 5789999999999999999999999999999987653
No 308
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.47 E-value=0.031 Score=50.71 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.+.|+|||||-.|+..|..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45789999999999999999999999999999753
No 309
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.46 E-value=0.042 Score=51.48 Aligned_cols=36 Identities=19% Similarity=0.455 Sum_probs=32.2
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
.++.+|+|||||-.|.+.|..|+.+|+ +|.++|.+.
T Consensus 2 ~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 2 APKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 455789999999999999999999998 999999854
No 310
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.40 E-value=0.04 Score=52.82 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|+|||+|..|+.+|..|...|.+|+++|.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 45789999999999999999999999999999853
No 311
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.37 E-value=0.037 Score=51.92 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=31.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|+|||+|.-|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999854
No 312
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.37 E-value=0.035 Score=51.96 Aligned_cols=36 Identities=28% Similarity=0.327 Sum_probs=32.3
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
.++.+|+|||||..|.+.|..|+++|+ +|.++|.+.
T Consensus 2 ~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 2 IERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 345789999999999999999999998 999999864
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.29 E-value=0.044 Score=48.02 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=31.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+...|+|||||-.|...|..|.+.|.+|+|++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5678999999999999999999999999999864
No 314
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.28 E-value=0.039 Score=53.62 Aligned_cols=38 Identities=29% Similarity=0.362 Sum_probs=34.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLG 64 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~G 64 (493)
...+++|||+|.+|+-+|..|.+.|.+|+++|+.+++.
T Consensus 141 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~ 178 (404)
T 3fg2_P 141 DKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM 178 (404)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch
Confidence 45789999999999999999999999999999987653
No 315
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.25 E-value=0.046 Score=47.66 Aligned_cols=37 Identities=22% Similarity=0.190 Sum_probs=31.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
.+..+|.|||+|.-|.+.|..|+++|++|.+++++..
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 3567899999999999999999999999999998654
No 316
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.25 E-value=0.04 Score=50.66 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=31.1
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
-..+++|.|||+|.-|...|..|+ +|++|++++++.
T Consensus 9 ~~~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 9 HHHHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred ccCCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 356789999999999999999999 999999999853
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.22 E-value=0.04 Score=48.38 Aligned_cols=32 Identities=28% Similarity=0.521 Sum_probs=30.2
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+|+|||+|-.|...|..|.++|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999864
No 318
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.14 E-value=0.047 Score=50.88 Aligned_cols=37 Identities=27% Similarity=0.255 Sum_probs=33.4
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..++.+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4456789999999999999999999999999999864
No 319
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.14 E-value=0.033 Score=56.48 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=33.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
..++|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 457899999999999999999999999999999764
No 320
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.11 E-value=0.037 Score=51.71 Aligned_cols=33 Identities=27% Similarity=0.401 Sum_probs=30.3
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|+|||+|.-|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999854
No 321
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=94.10 E-value=0.11 Score=50.91 Aligned_cols=38 Identities=24% Similarity=0.277 Sum_probs=28.7
Q ss_pred cCCccccceeEEEEecCCcEEEEE--cC-----CcEEEcCEEEEecC
Q 039105 238 DIDIRLNQRVTKISNGCNKVMVTV--ED-----GRNFVADAAIVTVP 277 (493)
Q Consensus 238 gv~i~~~~~V~~I~~~~~~v~V~~--~~-----G~~~~ad~VI~a~~ 277 (493)
|++++++++|++|+.+ ++.+.. .+ ++++.+|.||++++
T Consensus 222 gI~~~~~~~v~~v~~~--~v~~~~~~~~g~~~~~~~i~~D~vv~~~g 266 (437)
T 3sx6_A 222 GIEAYTNCKVTKVEDN--KMYVTQVDEKGETIKEMVLPVKFGMMIPA 266 (437)
T ss_dssp TCEEECSEEEEEEETT--EEEEEEECTTSCEEEEEEEECSEEEEECC
T ss_pred CCEEEcCCEEEEEECC--eEEEEecccCCccccceEEEEeEEEEcCC
Confidence 8899999999999643 444432 33 45789999999976
No 322
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.10 E-value=0.046 Score=53.95 Aligned_cols=37 Identities=22% Similarity=0.084 Sum_probs=33.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCc-EEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFK-VVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~-V~v~E~~~~~ 63 (493)
...+|+|||+|.+|+=.|..|++.|.+ |+|+++.+.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 457899999999999999999999999 9999996543
No 323
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.05 E-value=0.044 Score=54.38 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-..+|+|||+|.-|+..|..|+++|++|++++++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhCCCEEEEEECC
Confidence 4578999999999999999999999999999975
No 324
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.00 E-value=0.055 Score=53.01 Aligned_cols=36 Identities=31% Similarity=0.404 Sum_probs=32.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
+..+|.|||+|.-|.+.|..|+++|++|+++|++..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 456899999999999999999999999999998654
No 325
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=93.97 E-value=0.047 Score=50.91 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=30.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|+|||+|.-|.+.|..|+++|++|++++++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECC
Confidence 357999999999999999999999999999885
No 326
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.96 E-value=0.04 Score=52.34 Aligned_cols=34 Identities=26% Similarity=0.319 Sum_probs=31.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+..+|+|||+|..|+.+|..|...|.+|++++++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~ 216 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVR 216 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4578999999999999999999999999999985
No 327
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.85 E-value=0.047 Score=53.11 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=32.8
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.++.+|+|||.|..||..|..|+++|++|+.+|-+.
T Consensus 19 ~~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 19 SHMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 357889999999999999999999999999999753
No 328
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.81 E-value=0.06 Score=49.53 Aligned_cols=32 Identities=19% Similarity=0.122 Sum_probs=30.2
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+|.|||+|.-|.+.|..|+++|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 69999999999999999999999999999865
No 329
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=93.80 E-value=0.061 Score=50.78 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
..+|+|||+|.-|.+.|..|+++|++|+++++.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 358999999999999999999999999999973
No 330
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.79 E-value=0.053 Score=50.97 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=31.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
++.+|+|||||-.|.+.|..|++.|+ +|.++|.+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34689999999999999999999998 999999864
No 331
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.78 E-value=0.047 Score=50.50 Aligned_cols=38 Identities=18% Similarity=0.053 Sum_probs=32.3
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
|..+.+|.|||.|.-|...|..|+++|++|.+++++..
T Consensus 12 M~~~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 12 TTEQLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp ---CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 34457899999999999999999999999999998653
No 332
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=93.74 E-value=0.056 Score=51.48 Aligned_cols=33 Identities=24% Similarity=0.150 Sum_probs=30.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|+|||+|..|...|..|+++|++|++++++
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 368999999999999999999999999999885
No 333
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.73 E-value=0.059 Score=50.45 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=31.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
+.+|+|||||-.|.+.|+.|+++|+ +|.+++++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999863
No 334
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.67 E-value=0.058 Score=53.06 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=31.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|.|||+|..|+..|..|+++|++|++++++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999864
No 335
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.65 E-value=0.072 Score=50.01 Aligned_cols=34 Identities=21% Similarity=0.343 Sum_probs=31.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
+.+|+|||||..|.+.|+.|+++|+ +|.++|.+.
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 3689999999999999999999998 999999864
No 336
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=93.57 E-value=0.075 Score=52.46 Aligned_cols=36 Identities=31% Similarity=0.418 Sum_probs=31.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCc-EEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFK-VVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~-V~v~E~~~~ 62 (493)
...+|+|||||.+|+-+|..+.+.|.+ |+|+++.++
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 457899999999999999999999974 999998653
No 337
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.52 E-value=0.054 Score=50.07 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|+|||+|.-|.+.|..|+++|++|+++.++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999863
No 338
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.46 E-value=0.072 Score=52.66 Aligned_cols=35 Identities=31% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35679999999999999999999999999999854
No 339
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.37 E-value=0.035 Score=53.19 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=29.6
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 8999999999999999999999999999885
No 340
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.27 E-value=0.076 Score=49.65 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=29.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
...+|+|||+|.-|.+.|..|+++|++|+++ ++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 4578999999999999999999999999999 64
No 341
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.24 E-value=0.09 Score=47.05 Aligned_cols=35 Identities=23% Similarity=0.194 Sum_probs=31.3
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
....+|.|||+|.-|.+.|..|+++|++|.+++++
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35678999999999999999999999999999985
No 342
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.22 E-value=0.083 Score=51.75 Aligned_cols=36 Identities=25% Similarity=0.401 Sum_probs=32.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
-...++|||.|.-|+..|..|+++|++|++++++..
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457899999999999999999999999999998753
No 343
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.14 E-value=0.057 Score=53.53 Aligned_cols=36 Identities=14% Similarity=0.349 Sum_probs=32.5
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDA--SFKVVLLESR 60 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~ 60 (493)
|.++.+|.|||+|..|+..|..|+++ |++|++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~ 39 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVN 39 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 45567899999999999999999999 8999999975
No 344
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=93.10 E-value=0.047 Score=44.30 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=30.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
..+|+|||+|..|...|..|.+.|.+|.|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~ 53 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRN 53 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCC
Confidence 678999999999999999999999999999985
No 345
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=93.05 E-value=0.094 Score=50.04 Aligned_cols=35 Identities=29% Similarity=0.577 Sum_probs=32.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
|+.|+|||||..|..+|+.+.+.|++|.+++.+..
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 57899999999999999999999999999998653
No 346
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.04 E-value=0.093 Score=52.02 Aligned_cols=34 Identities=26% Similarity=0.427 Sum_probs=31.4
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..+|.|||+|.-|.+.|..|+++|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4679999999999999999999999999999864
No 347
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.01 E-value=0.11 Score=45.44 Aligned_cols=34 Identities=29% Similarity=0.351 Sum_probs=30.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
++.+|+|||+|..|...|..|.+.|++|.+++++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3467999999999999999999999999999985
No 348
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.99 E-value=0.078 Score=50.26 Aligned_cols=34 Identities=35% Similarity=0.512 Sum_probs=31.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+..+|+|+|||.+|..+|..|...|. +|.++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 45789999999999999999999998 89999995
No 349
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.96 E-value=0.09 Score=48.78 Aligned_cols=32 Identities=31% Similarity=0.381 Sum_probs=29.9
Q ss_pred cEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
+|+|||||..|.+.|+.|+++|+ +|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999863
No 350
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.96 E-value=0.085 Score=51.26 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=30.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|+|||+|.-|+..|..|++ |++|++++++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 45689999999999999999998 99999999863
No 351
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.95 E-value=0.093 Score=48.67 Aligned_cols=35 Identities=23% Similarity=0.163 Sum_probs=31.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
++.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 44689999999999999999999999999998853
No 352
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.94 E-value=0.076 Score=49.23 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=31.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
++.+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4578999999999999999999999999999885
No 353
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.83 E-value=0.086 Score=49.91 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=31.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+..+|+|+|||.+|..+|..|...|. +|.|++++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999999999999999997 79999995
No 354
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.82 E-value=0.11 Score=48.21 Aligned_cols=34 Identities=32% Similarity=0.479 Sum_probs=31.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+..+|+|||+|..|.+.|+.|+++|+ +|.++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 35689999999999999999999999 99999985
No 355
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.78 E-value=0.1 Score=49.62 Aligned_cols=37 Identities=19% Similarity=0.127 Sum_probs=31.8
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
|.+..+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4455789999999999999999999999999999853
No 356
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.69 E-value=0.1 Score=50.48 Aligned_cols=34 Identities=32% Similarity=0.455 Sum_probs=31.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+..+|+|||+|..|+.+|..|...|.+|++++++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~ 204 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTR 204 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3578999999999999999999999999999985
No 357
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=92.69 E-value=0.44 Score=45.64 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=27.2
Q ss_pred cCceEEeeccccCcCcc---hhHHHHHHHHHHHHHHHH
Q 039105 426 LGNLFFGGEAVSMEHQG---SVHGAYSAGVMAAQNCQK 460 (493)
Q Consensus 426 ~~~l~~aGd~~~~~~~g---~~egA~~sg~~aa~~i~~ 460 (493)
.+|+.++||..+...|- ++.-|+++|..+|+.+..
T Consensus 261 ~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 261 DGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp ETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 37999999999985552 666688888888887754
No 358
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.68 E-value=0.12 Score=48.28 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|.|||+|.-|...|..|++.|++|.+++++.
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999853
No 359
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=92.67 E-value=0.11 Score=49.07 Aligned_cols=36 Identities=25% Similarity=0.290 Sum_probs=31.1
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-....+|.|||+|.-|.+.|..|+++|++|++++++
T Consensus 11 ~~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 11 HHMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 345678999999999999999999999999999884
No 360
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.63 E-value=0.11 Score=47.87 Aligned_cols=33 Identities=30% Similarity=0.308 Sum_probs=30.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
++|.|||+|.-|...|..|+++|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 361
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.56 E-value=0.12 Score=49.15 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=30.7
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
...|+|+|+|.+|+.+|..|...|.+|++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~ 199 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDIN 199 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 378999999999999999999999999999985
No 362
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.56 E-value=0.074 Score=48.91 Aligned_cols=33 Identities=27% Similarity=0.292 Sum_probs=30.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999864
No 363
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.56 E-value=0.072 Score=49.70 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=29.3
Q ss_pred CcEEEECcCHHHHHHHHHHHhC-----C-CcEEEEee
Q 039105 29 PSVIVIGGGISGLAAARILYDA-----S-FKVVLLES 59 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~-----G-~~V~v~E~ 59 (493)
.+|.|||+|.-|.+.|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4899999999999999999999 9 99999987
No 364
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.54 E-value=0.12 Score=49.75 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=31.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|+|||+|..|+.+|..|...|.+|.+++++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 46789999999999999999999999999999853
No 365
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.54 E-value=0.099 Score=48.92 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=32.4
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+..+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 29 ~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 29 PYARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CCCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 345689999999999999999999999999999853
No 366
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.53 E-value=0.11 Score=51.64 Aligned_cols=37 Identities=30% Similarity=0.493 Sum_probs=33.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
...+++|||+|..|+-.|..|++.|.+|+++|+.+++
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~ 226 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLI 226 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcc
Confidence 3578999999999999999999999999999997754
No 367
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.46 E-value=0.11 Score=48.21 Aligned_cols=31 Identities=32% Similarity=0.443 Sum_probs=29.3
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.+|+|||+|.-|.+.|..|+ +|++|+++.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECC
Confidence 58999999999999999999 99999999985
No 368
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.43 E-value=0.087 Score=51.69 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=29.6
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+|+|||+|..|+..|..|+++|++|++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 6999999999999999999999999999985
No 369
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.42 E-value=0.14 Score=47.88 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=31.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
+.+|+|||||-.|.+.|+.|+..|+ +|.++|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999864
No 370
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=92.39 E-value=0.13 Score=46.74 Aligned_cols=34 Identities=15% Similarity=0.162 Sum_probs=31.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+.++|+|+|-.|.++|..|++.|.+|+|+.++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 4578999999999999999999999999999875
No 371
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.37 E-value=0.13 Score=47.78 Aligned_cols=33 Identities=27% Similarity=0.490 Sum_probs=30.2
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
.+|+|||||-.|.+.|+.|+.+|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999996 899999753
No 372
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.34 E-value=0.16 Score=47.23 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=31.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+.+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999998853
No 373
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.25 E-value=0.16 Score=45.97 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=31.5
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+.++|||+|-+|-++|+.|++.|.+|+|+.|+.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6789999999999999999999999999998864
No 374
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.14 E-value=0.14 Score=47.73 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=30.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
++.+|+|||||-.|.+.|+.|+.+|. +|.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35789999999999999999999987 899999863
No 375
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.13 E-value=0.14 Score=47.60 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=29.4
Q ss_pred cEEEECcCHHHHHHHHHHHhC--CCcEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDA--SFKVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~~ 61 (493)
+|+|||||..|.+.|..|+++ |++|.++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999986 78999999864
No 376
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=91.98 E-value=0.12 Score=47.84 Aligned_cols=34 Identities=21% Similarity=0.132 Sum_probs=30.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
++.+|.|||+|.-|...|..|.+.|++|.+++++
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 36 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLM 36 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4568999999999999999999999999999885
No 377
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=91.97 E-value=0.08 Score=46.54 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=30.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEE-EeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVL-LESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v-~E~~ 60 (493)
++.+|.|||+|.-|.+.|..|+++|++|.+ ++++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~ 56 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRG 56 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 357899999999999999999999999988 7663
No 378
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=91.90 E-value=0.13 Score=47.67 Aligned_cols=36 Identities=25% Similarity=0.518 Sum_probs=30.8
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
.++.+|+|||||..|.+.|+.|+.+|. +|.++|.+.
T Consensus 12 ~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 12 KTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 345789999999999999999999998 899999865
No 379
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=91.88 E-value=0.12 Score=49.14 Aligned_cols=41 Identities=24% Similarity=0.521 Sum_probs=35.6
Q ss_pred CCCCcEEEECc-CHHHHHHHHHHHhCCC---cEEEEeeCC-CCCce
Q 039105 26 GSLPSVIVIGG-GISGLAAARILYDASF---KVVLLESRD-RLGGR 66 (493)
Q Consensus 26 ~~~~dv~IIGa-GiaGLsaA~~L~~~G~---~V~v~E~~~-~~GG~ 66 (493)
.+..+|+|||| |.+|+.||..+...|. +|+++|.+. .-||+
T Consensus 212 ~~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 212 ARKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 46789999999 9999999999999997 999999875 44664
No 380
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=91.81 E-value=0.16 Score=53.12 Aligned_cols=35 Identities=31% Similarity=0.560 Sum_probs=31.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 311 ~~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 311 KIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 34679999999999999999999999999999863
No 381
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=91.75 E-value=0.12 Score=49.98 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=28.8
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+|+|||+|..|+..|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999853
No 382
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.74 E-value=0.12 Score=48.10 Aligned_cols=34 Identities=21% Similarity=0.107 Sum_probs=30.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
++.+|.|||.|.-|...|..|+++|+ +|.+++++
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 45789999999999999999999999 99999985
No 383
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=91.73 E-value=0.18 Score=46.61 Aligned_cols=34 Identities=24% Similarity=0.478 Sum_probs=31.0
Q ss_pred CCcEEEEC-cCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIG-GGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIG-aGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.+|.||| +|.-|.+.|..|++.|++|.+++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 45799999 99999999999999999999998754
No 384
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.72 E-value=0.13 Score=46.75 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=31.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+.++|+|+|-+|.++|+.|++.|.+|+|+.++
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~ 151 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRT 151 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 4578999999999999999999999999999885
No 385
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=91.66 E-value=0.19 Score=48.79 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+..|+|||.|-.|...|..|.+.|++|+|+|.+.
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 34579999999999999999999999999999864
No 386
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.65 E-value=0.15 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=30.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
+..+|+|||+|..|.+.|+.|+..|. +|.++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 45789999999999999999999987 89999985
No 387
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.60 E-value=0.12 Score=48.52 Aligned_cols=30 Identities=27% Similarity=0.328 Sum_probs=28.9
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEee
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLES 59 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~ 59 (493)
+|+|||+|.-|.+.|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 388
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=91.60 E-value=0.2 Score=46.68 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=31.0
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
+.+|+|||+|..|.+.|+.|+..|. +|.++|.+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999988 999999864
No 389
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.59 E-value=0.15 Score=50.34 Aligned_cols=35 Identities=29% Similarity=0.473 Sum_probs=30.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHH--------------------hCCC-cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILY--------------------DASF-KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~--------------------~~G~-~V~v~E~~~ 61 (493)
...+|+|||+|.+|+-+|..|+ +.|. +|+|+++.+
T Consensus 144 ~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 144 SCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp TSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 3578999999999999999999 5687 699999964
No 390
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=91.58 E-value=0.17 Score=46.61 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=31.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+...++|||+|-+|.++|..|.+.|. +|+|+.++
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45789999999999999999999997 89999885
No 391
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=91.54 E-value=0.14 Score=47.66 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=30.1
Q ss_pred CcEEEECcCHHHHHHHHHHHhCC--CcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDAS--FKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G--~~V~v~E~~~ 61 (493)
.+|+|||+|-.|.+.|..|+++| .+|.+++++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 57999999999999999999999 7899999853
No 392
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.53 E-value=0.19 Score=48.00 Aligned_cols=33 Identities=33% Similarity=0.579 Sum_probs=30.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
...|+|+|+|..|+.+|..|+..|.+|++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~ 198 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVN 198 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 478999999999999999999999999999985
No 393
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.52 E-value=0.17 Score=47.30 Aligned_cols=34 Identities=18% Similarity=0.155 Sum_probs=31.5
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCC-CcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDAS-FKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~~ 61 (493)
+.+|.|||+|.-|...|..|+++| ++|.+++++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999863
No 394
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=91.46 E-value=0.19 Score=43.65 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=29.0
Q ss_pred cEEEEC-cCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 30 SVIVIG-GGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 30 dv~IIG-aGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+|+||| +|..|...|..|.++|++|.+++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESS
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 689999 9999999999999999999999884
No 395
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.37 E-value=0.1 Score=51.50 Aligned_cols=65 Identities=12% Similarity=0.227 Sum_probs=44.9
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCCCCCceeeccCCCCceeecccceeeCCCCCCchHHHHHHhCCc
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRDRLGGRIHTDYSFGCPVDMGASWLHGVCNENPLAPLIRRLGLT 103 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~~~l~~~lg~~ 103 (493)
.++|+|+|+|-.|.+.|..|.+.|++|+|+|++...=-++.. +.+...+.+ +..-.+.|++.|++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~--------~~~~~~i~G---d~~~~~~L~~Agi~ 67 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQD--------KYDLRVVNG---HASHPDVLHEAGAQ 67 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHH--------HSSCEEEES---CTTCHHHHHHHTTT
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------hcCcEEEEE---cCCCHHHHHhcCCC
Confidence 457999999999999999999999999999996421111110 123344442 23445778888886
No 396
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.29 E-value=0.16 Score=45.61 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=30.3
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
..+|+|||+|-.|..+|..|++.|. +++|++..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4679999999999999999999997 79999984
No 397
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=91.13 E-value=0.16 Score=46.95 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=30.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.+|.|||+|..|...|..|.+.|++|.+++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSC
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCC
Confidence 57999999999999999999999999999885
No 398
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=91.13 E-value=0.18 Score=46.93 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=31.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
+..+|+|||+|..|.++|+.|+.+|. +|.++|.+.
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 55789999999999999999999987 899999753
No 399
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=91.07 E-value=0.064 Score=47.28 Aligned_cols=35 Identities=20% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+...+|.|||+|.-|-+.|..|.++|++|.++++.
T Consensus 4 ~~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 4 APRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 34568999999999999999999999999999874
No 400
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.05 E-value=0.13 Score=51.07 Aligned_cols=33 Identities=15% Similarity=0.400 Sum_probs=30.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA--SFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~ 60 (493)
+.+|.|||+|..|+..|..|+++ |++|++++++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~ 43 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMN 43 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 45899999999999999999998 7999999975
No 401
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=91.04 E-value=0.22 Score=49.27 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=32.2
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+.+|.|||.|.-|...|..|+++|++|.+++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45689999999999999999999999999999864
No 402
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.03 E-value=0.17 Score=47.17 Aligned_cols=36 Identities=17% Similarity=0.337 Sum_probs=31.8
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
|.++.+|+|||||-.|.+.|+.|+..+. ++.++|.+
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 5566899999999999999999999876 79999974
No 403
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.03 E-value=0.16 Score=47.43 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=29.3
Q ss_pred cEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 30 SVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
+|+|||+|-.|.+.|..|+++|+ +|.+++++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~ 34 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVD 34 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 69999999999999999999998 99999985
No 404
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=90.89 E-value=0.18 Score=46.62 Aligned_cols=35 Identities=23% Similarity=0.164 Sum_probs=30.9
Q ss_pred CCCCcEEEECcC-HHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGG-ISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaG-iaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-...+++|||+| +.|..+|..|...|.+|+|++++
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 367889999999 78999999999999999998664
No 405
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.88 E-value=0.24 Score=47.40 Aligned_cols=34 Identities=35% Similarity=0.511 Sum_probs=31.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
....|+|||+|..|+.+|..|...|.+|++++++
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~ 200 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDIN 200 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4577999999999999999999999999999984
No 406
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.81 E-value=0.23 Score=45.30 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=29.4
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
.+|.|||+|.-|.+.|..|++.|+ +|.+++++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 35 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDIN 35 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 479999999999999999999998 89999874
No 407
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.77 E-value=0.21 Score=49.27 Aligned_cols=34 Identities=21% Similarity=0.337 Sum_probs=31.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+...|+|||+|-+|...|..|.+.|.+|+|++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 3567999999999999999999999999999974
No 408
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=90.76 E-value=0.27 Score=45.03 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=30.6
Q ss_pred CCcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGG-GISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|.|||+ |.-|.+.|..|.++|++|.+++++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~ 44 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIA 44 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECC
Confidence 358999999 999999999999999999999884
No 409
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=90.72 E-value=0.19 Score=44.07 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=31.6
Q ss_pred CCCCcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGG-GISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.++++|+|.|| |..|...+..|.++|++|.++.++.
T Consensus 2 ~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 2 EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp -CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 34678999995 9999999999999999999999863
No 410
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=90.72 E-value=0.18 Score=45.81 Aligned_cols=35 Identities=14% Similarity=0.211 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
+.+.++|||+|-+|-++|+.|++.|. +|.|+.|+.
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 45789999999999999999999998 899998864
No 411
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.71 E-value=0.21 Score=45.64 Aligned_cols=35 Identities=11% Similarity=0.233 Sum_probs=31.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+++|+|.|||..|...+..|.++|++|.++.++.
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 34689999999999999999999999999998854
No 412
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=90.68 E-value=0.2 Score=47.14 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=29.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
...+|+|||+|.+|+-+|..|++.| +|+++++.
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~ 194 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQH 194 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSS
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECC
Confidence 4578999999999999999999998 69999985
No 413
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.67 E-value=0.26 Score=45.87 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=30.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
..+|.|||+|.-|.+.|..|.++|+ +|.+++++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3689999999999999999999999 899998853
No 414
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.48 E-value=0.31 Score=43.69 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=30.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
+. +++|||+|-+|-++|+.|.+.|. +|.|+.|+.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 45 89999999999999999999998 899999863
No 415
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=90.46 E-value=0.22 Score=49.31 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.+++|.|||+|.-|.+.|..|+++|++|.+++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 3467999999999999999999999999999986
No 416
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=90.42 E-value=0.26 Score=46.12 Aligned_cols=35 Identities=26% Similarity=0.186 Sum_probs=30.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCC----CcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDAS----FKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G----~~V~v~E~~~ 61 (493)
++.+|.|||+|.-|.+.|..|.++| ++|.+++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3457999999999999999999999 7899998853
No 417
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.40 E-value=0.24 Score=44.65 Aligned_cols=33 Identities=18% Similarity=0.181 Sum_probs=30.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|.|||+|.-|...|..|.+.|++|.+++++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSS
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCC
Confidence 468999999999999999999999999999884
No 418
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=90.32 E-value=0.24 Score=46.19 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=31.1
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
....+|+|||||-.|.++|+.|+..|. ++.++|.+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 355789999999999999999999887 89999974
No 419
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=90.31 E-value=0.31 Score=45.82 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=31.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+|.|||.|.-|-+.|..|.++|++|.+++++.
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34679999999999999999999999999999853
No 420
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.28 E-value=0.18 Score=48.34 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=31.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCC-------CcEEEEeeCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDAS-------FKVVLLESRDR 62 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G-------~~V~v~E~~~~ 62 (493)
.+|.|||+|.-|.+.|..|+++| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998643
No 421
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=90.26 E-value=0.3 Score=45.66 Aligned_cols=35 Identities=20% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
.+..+|+|||||-.|.+.|+.|+.+|. ++.++|.+
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 456789999999999999999999987 89999975
No 422
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.25 E-value=0.21 Score=45.86 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=29.4
Q ss_pred cEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
+|+|||||..|.+.|+.|++.|+ +|.++|.++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999987 899999853
No 423
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=90.25 E-value=0.29 Score=48.64 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=32.2
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
....+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345679999999999999999999999999999864
No 424
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.22 E-value=0.19 Score=46.33 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=28.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|.+||-|.-|...|..|.++|++|.+++++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~ 38 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTA 38 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999999999999864
No 425
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=90.22 E-value=0.21 Score=45.71 Aligned_cols=32 Identities=25% Similarity=0.261 Sum_probs=29.2
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|.|||+|.-|...|..|.+ |++|.+++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 469999999999999999999 99999998853
No 426
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=90.20 E-value=0.24 Score=51.72 Aligned_cols=35 Identities=17% Similarity=0.261 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+..+|.|||+|.-|...|..|+++|++|+++|++.
T Consensus 313 ~i~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 313 DVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp CCSSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 45679999999999999999999999999999863
No 427
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=90.19 E-value=0.32 Score=45.08 Aligned_cols=35 Identities=9% Similarity=0.035 Sum_probs=31.7
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
-+.+.++|+|||-+|-++|+.|++.|. +|+|+.|+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 356789999999999999999999998 89999886
No 428
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=90.19 E-value=0.27 Score=44.81 Aligned_cols=31 Identities=19% Similarity=0.230 Sum_probs=29.1
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+|.|||+|.-|.+.|..|.+.|++|.+++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 6899999999999999999999999999874
No 429
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.16 E-value=0.19 Score=45.81 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=31.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+..+++|||+|-.|-+.|..|.+.|.+|.|++++
T Consensus 128 ~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~ 161 (275)
T 2hk9_A 128 KEKSILVLGAGGASRAVIYALVKEGAKVFLWNRT 161 (275)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999886
No 430
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.15 E-value=0.18 Score=50.31 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=30.7
Q ss_pred CCCCcEEEECcCHHHHH-HHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLA-AARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLs-aA~~L~~~G~~V~v~E~~~ 61 (493)
...++|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 34578999999999998 6999999999999999753
No 431
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.04 E-value=0.32 Score=44.14 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=30.8
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+.+.++|+|+|-+|-++|+.|++.|. +|+|+.|+
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 56789999999999999999999996 89999875
No 432
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.03 E-value=0.26 Score=45.88 Aligned_cols=34 Identities=26% Similarity=0.490 Sum_probs=30.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
+..+|+|||+|..|-+.|+.|+.+|. +|.++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 45689999999999999999998875 79999985
No 433
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=90.01 E-value=0.33 Score=44.85 Aligned_cols=35 Identities=23% Similarity=0.238 Sum_probs=32.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
....+.|||+|-.|..+|..|...|.+|.+++++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 56789999999999999999999999999999853
No 434
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.96 E-value=0.17 Score=49.11 Aligned_cols=31 Identities=23% Similarity=0.267 Sum_probs=28.5
Q ss_pred CcEEEECcCHHHHHHHHHHHh-CCCcEEEEee
Q 039105 29 PSVIVIGGGISGLAAARILYD-ASFKVVLLES 59 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~-~G~~V~v~E~ 59 (493)
.+|+|||+|.-|.+.|..|++ +|++|+++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 479999999999999999998 5999999983
No 435
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=89.95 E-value=0.35 Score=43.21 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=29.9
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCC----cEEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASF----KVVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~----~V~v~E~~ 60 (493)
.+|.|||+|.-|.+.|..|.++|+ +|.+++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~ 38 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLN 38 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSC
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCC
Confidence 579999999999999999999998 99999984
No 436
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.91 E-value=0.24 Score=44.71 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=29.0
Q ss_pred cEEEECcCHHHHHHHHHHHhCC-CcEEEEeeC
Q 039105 30 SVIVIGGGISGLAAARILYDAS-FKVVLLESR 60 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G-~~V~v~E~~ 60 (493)
+|.|||+|.-|.+.|..|++.| ++|.+++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~ 33 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRG 33 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCC
Confidence 6999999999999999999999 999999884
No 437
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=89.91 E-value=0.28 Score=44.66 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=32.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
.+...++|+|+|-+|-++|+.|.+.|. +|+|+.|+.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 356789999999999999999999998 899998753
No 438
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.91 E-value=0.14 Score=45.30 Aligned_cols=35 Identities=26% Similarity=0.281 Sum_probs=29.9
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.....++|+|+|-.|...|..|.+.|+ |+++|++.
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 345679999999999999999999999 99999864
No 439
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.86 E-value=0.25 Score=45.86 Aligned_cols=33 Identities=30% Similarity=0.468 Sum_probs=29.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASF--KVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~~ 61 (493)
++|+|||||..|.+.|+.|++.|. +|.++|.+.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 369999999999999999999887 899999864
No 440
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=89.86 E-value=0.4 Score=43.74 Aligned_cols=34 Identities=29% Similarity=0.373 Sum_probs=31.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
++.|+|.|||..|...+..|.++|++|.++.++.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4579999999999999999999999999998864
No 441
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=89.84 E-value=0.23 Score=48.25 Aligned_cols=35 Identities=17% Similarity=0.266 Sum_probs=31.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
...+..|||.|.-|+..|..|+++|++|++++.+.
T Consensus 10 ~~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 10 HGSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45678999999999999999999999999999864
No 442
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=89.84 E-value=0.35 Score=44.10 Aligned_cols=34 Identities=15% Similarity=0.260 Sum_probs=31.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+.+.++|+|+|-+|-++|+.|++.|. +|.|+.|+
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~ 159 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRT 159 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC
Confidence 56789999999999999999999996 89999885
No 443
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.79 E-value=0.36 Score=44.42 Aligned_cols=35 Identities=26% Similarity=0.247 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
....+.|||+|-.|..+|..|...|.+|.+++++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 56789999999999999999999999999999853
No 444
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=89.77 E-value=0.27 Score=45.20 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=29.7
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+|.|||+|.-|...|..|.+.|++|.+++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998853
No 445
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=89.64 E-value=0.36 Score=44.09 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=31.3
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
-+.+.++|+|||-+|-++|+.|++.|. +|.|+.|+
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~ 160 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD 160 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC
Confidence 356789999999999999999999998 69999875
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.62 E-value=0.35 Score=42.67 Aligned_cols=35 Identities=17% Similarity=0.160 Sum_probs=31.1
Q ss_pred CCCcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGG-GISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.+.|+|.|| |-.|...|..|.++|++|.++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4567999997 9999999999999999999999854
No 447
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=89.61 E-value=0.35 Score=46.23 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=30.5
Q ss_pred CcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGG-GISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.|+|.|| |..|...+..|.++|++|.++.++.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~ 62 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRS 62 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCC
Confidence 67999997 9999999999999999999998864
No 448
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=89.51 E-value=0.2 Score=46.14 Aligned_cols=33 Identities=24% Similarity=0.145 Sum_probs=29.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.+|.|||+|.-|...|..|.+.|++|.+++ +.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 3579999999999999999999999999998 54
No 449
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=89.49 E-value=0.26 Score=49.81 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=32.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..+.|+|||+|.+|+-.|..|++.|.+|+|+++.+
T Consensus 185 ~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~ 219 (542)
T 1w4x_A 185 SGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTP 219 (542)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred CCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCC
Confidence 35789999999999999999999999999999864
No 450
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=89.48 E-value=0.32 Score=48.23 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=30.6
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
.+|.|||+|.-|...|..|+++|++|.+++++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999853
No 451
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=89.40 E-value=0.37 Score=45.27 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=30.2
Q ss_pred CCCcEEEECc-CHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 27 SLPSVIVIGG-GISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGa-GiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
++.+|+|||| |-.|.++|+.|+..|. +|.++|.+
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 4578999997 9999999999999984 89999974
No 452
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.35 E-value=0.3 Score=44.83 Aligned_cols=33 Identities=15% Similarity=0.250 Sum_probs=30.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+.++|+|||-.|.++|..|++.| +|.|+.++
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 4567999999999999999999999 99999875
No 453
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=89.28 E-value=0.36 Score=47.32 Aligned_cols=35 Identities=26% Similarity=0.209 Sum_probs=32.0
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-..+.|+|+|+|-.|.++|..|+..|.+|.+.|.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~ 297 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEID 297 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35678999999999999999999999999999885
No 454
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=89.20 E-value=0.32 Score=43.84 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=31.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCC----CcEEEEeeCCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDAS----FKVVLLESRDR 62 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G----~~V~v~E~~~~ 62 (493)
+.+|.|||+|.-|.+.|..|.++| ++|.+++++..
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 357999999999999999999999 79999998653
No 455
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=89.15 E-value=0.44 Score=44.08 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=31.6
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
.+.+.++|+|||=+|-++|+.|++.|. +|.|+.|+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 356789999999999999999999998 79999886
No 456
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=89.14 E-value=0.18 Score=47.80 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=30.9
Q ss_pred CcEEEECcCHHHHHHHHHHHhCC-------CcEEEEeeCCC
Q 039105 29 PSVIVIGGGISGLAAARILYDAS-------FKVVLLESRDR 62 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G-------~~V~v~E~~~~ 62 (493)
.+|+|||+|.-|.+.|..|+++| ++|.+++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999998643
No 457
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=89.14 E-value=0.36 Score=50.35 Aligned_cols=35 Identities=31% Similarity=0.309 Sum_probs=32.0
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+-.+|.|||||.-|-..|+.++++|++|+++|.++
T Consensus 315 ~i~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~ 349 (742)
T 3zwc_A 315 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 349 (742)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred cccEEEEEcccHHHHHHHHHHHhCCCchhcccchH
Confidence 35689999999999999999999999999999854
No 458
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=89.09 E-value=0.42 Score=43.13 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=30.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+. +++|||+|-.|-+.|..|.+.|.+|.+++++
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~ 148 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRT 148 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 44 8999999999999999999999999999986
No 459
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.92 E-value=0.36 Score=47.79 Aligned_cols=32 Identities=28% Similarity=0.382 Sum_probs=30.0
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~ 33 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRT 33 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 36999999999999999999999999999985
No 460
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=88.92 E-value=0.47 Score=43.27 Aligned_cols=34 Identities=15% Similarity=0.237 Sum_probs=30.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC---cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF---KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~---~V~v~E~~~ 61 (493)
+.+|.|||+|.-|.+.|..|.++|+ +|.+++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 3679999999999999999999998 899999853
No 461
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.91 E-value=0.34 Score=47.77 Aligned_cols=36 Identities=36% Similarity=0.470 Sum_probs=30.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhC--------------------C-CcEEEEeeCCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDA--------------------S-FKVVLLESRDR 62 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~--------------------G-~~V~v~E~~~~ 62 (493)
...+|+|||+|.+|+-+|..|++. | .+|+|+++.+.
T Consensus 146 ~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 146 SGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 457899999999999999999974 6 48999999653
No 462
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=88.83 E-value=0.32 Score=53.25 Aligned_cols=34 Identities=24% Similarity=0.327 Sum_probs=31.1
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
..+|+|||||..|+=+|..|.+.|. +|+|+++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3489999999999999999999996 899999876
No 463
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.75 E-value=0.34 Score=45.08 Aligned_cols=34 Identities=26% Similarity=0.395 Sum_probs=29.9
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
++.+|+|||||-.|.+.|+.|+.+|. +|.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999998884 79999874
No 464
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=88.64 E-value=0.47 Score=44.65 Aligned_cols=32 Identities=31% Similarity=0.281 Sum_probs=29.8
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.+|.|||+|.-|.+.|..|++.|++|.+++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~ 48 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRS 48 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECC
Confidence 57999999999999999999999999999885
No 465
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=88.60 E-value=0.5 Score=45.80 Aligned_cols=32 Identities=34% Similarity=0.546 Sum_probs=29.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC---cEEEEe
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF---KVVLLE 58 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~---~V~v~E 58 (493)
+..+|+|+|||-+|.++|+.|.+.|. +|.|++
T Consensus 185 ~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 185 SEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 45789999999999999999999997 799999
No 466
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=88.59 E-value=0.32 Score=43.98 Aligned_cols=32 Identities=25% Similarity=0.501 Sum_probs=29.4
Q ss_pred CcEEEECcCHHHHHHHHHHHhCCCc-EEEEeeC
Q 039105 29 PSVIVIGGGISGLAAARILYDASFK-VVLLESR 60 (493)
Q Consensus 29 ~dv~IIGaGiaGLsaA~~L~~~G~~-V~v~E~~ 60 (493)
.+|.|||+|.-|...|..|++.|++ |.+++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~ 43 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRT 43 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 5799999999999999999999999 8999874
No 467
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=88.35 E-value=0.75 Score=41.64 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=30.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
....++|||+|-+|-++|+.|.+.|. +|+|+.|+
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 45689999999999999999999997 79999885
No 468
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=88.13 E-value=0.45 Score=43.34 Aligned_cols=35 Identities=20% Similarity=0.189 Sum_probs=31.3
Q ss_pred CCCCcEEEECcC-HHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGG-ISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaG-iaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-..++++|||+| +.|.-+|..|.+.|.+|+|+.++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 367899999999 78999999999999999999643
No 469
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.05 E-value=0.77 Score=41.26 Aligned_cols=34 Identities=15% Similarity=0.265 Sum_probs=31.0
Q ss_pred CCCCcEEEECcC-HHHHHHHHHHHhCCCcEEEEee
Q 039105 26 GSLPSVIVIGGG-ISGLAAARILYDASFKVVLLES 59 (493)
Q Consensus 26 ~~~~dv~IIGaG-iaGLsaA~~L~~~G~~V~v~E~ 59 (493)
-..++++|||+| +.|..+|..|.+.|.+|+|+.+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~ 182 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHS 182 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeC
Confidence 677899999976 7999999999999999999975
No 470
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.97 E-value=0.56 Score=40.64 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=28.9
Q ss_pred cEEEECc-CHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 30 SVIVIGG-GISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 30 dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+|+|+|| |..|...+..|.++|++|.++.++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcC
Confidence 5999995 999999999999999999999885
No 471
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.75 E-value=0.64 Score=39.72 Aligned_cols=33 Identities=21% Similarity=0.428 Sum_probs=30.4
Q ss_pred CcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 29 PSVIVIGG-GISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 29 ~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+.|+|+|| |-.|...+..|.++|++|.++.++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999998853
No 472
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.71 E-value=0.79 Score=45.64 Aligned_cols=53 Identities=21% Similarity=0.148 Sum_probs=40.7
Q ss_pred ChHHHHHHHh-hcCCccccceeEEEEecCCcEEEEEcCCcEEEcCEEEEecChh
Q 039105 227 GYDPVIKALS-KDIDIRLNQRVTKISNGCNKVMVTVEDGRNFVADAAIVTVPLG 279 (493)
Q Consensus 227 G~~~l~~~L~-~gv~i~~~~~V~~I~~~~~~v~V~~~~G~~~~ad~VI~a~~~~ 279 (493)
|...+-+.+. .|++|+++++|++|..+++...|.+.+|+++.+|.||++++..
T Consensus 259 G~~gle~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 259 KADEVIQELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRR 312 (493)
T ss_dssp THHHHHHHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcC
Confidence 3434434444 4899999999999987654456778889899999999999754
No 473
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=87.70 E-value=0.5 Score=46.76 Aligned_cols=33 Identities=15% Similarity=0.192 Sum_probs=30.8
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+|.|||+|.-|...|..|+++|++|.+++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCC
Confidence 367999999999999999999999999999985
No 474
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=87.63 E-value=0.72 Score=40.09 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=29.7
Q ss_pred CCcEEEECc-CHHHHHHHHHHH-hCCCcEEEEeeCC
Q 039105 28 LPSVIVIGG-GISGLAAARILY-DASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGa-GiaGLsaA~~L~-~~G~~V~v~E~~~ 61 (493)
++.|+|.|| |-.|...|..|+ +.|++|.++.++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 345999995 999999999999 8999999998863
No 475
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=87.62 E-value=0.45 Score=43.87 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=31.3
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.+++|.+||=|.-|...|.+|.++|++|++++++
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~ 35 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLV 35 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSS
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCC
Confidence 4678999999999999999999999999999985
No 476
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=87.56 E-value=0.57 Score=44.38 Aligned_cols=35 Identities=23% Similarity=0.103 Sum_probs=31.7
Q ss_pred CCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-+.+.|+|+|+|-.|..+|.+|.+.|.+|++.+.+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 35678999999999999999999999999999864
No 477
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.56 E-value=0.41 Score=43.13 Aligned_cols=30 Identities=27% Similarity=0.111 Sum_probs=27.7
Q ss_pred cEEEECcCHHHHHHHHHHHhCCCcEEEEee
Q 039105 30 SVIVIGGGISGLAAARILYDASFKVVLLES 59 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~ 59 (493)
+|.|||+|.-|...|..|++.|++|.++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999998755
No 478
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=87.33 E-value=0.6 Score=43.85 Aligned_cols=37 Identities=22% Similarity=0.200 Sum_probs=30.5
Q ss_pred CCCCcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCCC
Q 039105 26 GSLPSVIVIGG-GISGLAAARILYDASFKVVLLESRDR 62 (493)
Q Consensus 26 ~~~~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~~ 62 (493)
.+.+.|+|.|| |..|...+..|.++|++|.++.+...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 45577999998 99999999999999999999988653
No 479
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=87.32 E-value=0.94 Score=44.73 Aligned_cols=36 Identities=19% Similarity=0.184 Sum_probs=32.8
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
......|+|||+|..|..+|..|...|.+|.++|.+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~ 306 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEID 306 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456788999999999999999999999999999985
No 480
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.30 E-value=0.66 Score=42.44 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=31.0
Q ss_pred CCCcEEEEC-cCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 27 SLPSVIVIG-GGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIG-aGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+.+.++|+| +|-.|.++|..|++.|.+|.++.++
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 457899999 9999999999999999999999874
No 481
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.28 E-value=0.5 Score=44.14 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=30.1
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC--cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF--KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~--~V~v~E~~ 60 (493)
++.+|+|||||-.|.+.|+.|+..+. ++.++|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 45789999999999999999998875 79999874
No 482
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=87.26 E-value=0.41 Score=47.65 Aligned_cols=36 Identities=14% Similarity=0.278 Sum_probs=31.6
Q ss_pred CCCCcEEEECcCHHHHH-HHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLA-AARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLs-aA~~L~~~G~~V~v~E~~~ 61 (493)
...++|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 17 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 53 (491)
T 2f00_A 17 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 53 (491)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred ccCCEEEEEEcCHHHHHHHHHHHHhCCCeEEEECCCC
Confidence 44567999999999998 8899999999999999854
No 483
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.19 E-value=0.64 Score=40.43 Aligned_cols=31 Identities=19% Similarity=0.269 Sum_probs=29.0
Q ss_pred cEEEECc-CHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 30 SVIVIGG-GISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 30 dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
+|+|.|| |..|...|..|.++|++|.++.++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEec
Confidence 5999998 999999999999999999999885
No 484
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=87.08 E-value=0.57 Score=42.70 Aligned_cols=35 Identities=23% Similarity=0.323 Sum_probs=31.1
Q ss_pred CCCCcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGG-GISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-..++++|||+ |+.|..+|..|.+.|.+|+|+.++
T Consensus 163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 46789999995 579999999999999999999873
No 485
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=87.08 E-value=0.5 Score=43.77 Aligned_cols=32 Identities=22% Similarity=0.505 Sum_probs=28.8
Q ss_pred cEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 30 SVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 30 dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
+|+|||||-.|.+.|+.|+.+|+ +|.++|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 58999999999999999998888 699999853
No 486
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=87.05 E-value=0.57 Score=42.38 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=31.2
Q ss_pred CCCCcEEEECcC-HHHHHHHHHHHhCCCcEEEEeeC
Q 039105 26 GSLPSVIVIGGG-ISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 26 ~~~~dv~IIGaG-iaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
-..++++|||+| +.|.-+|..|.+.|.+|+|+.++
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 467899999999 68999999999999999999653
No 487
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.95 E-value=0.44 Score=43.58 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=30.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+..+|+|||+|-.|-.+|..|++.|. +++|+|..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999996 69999883
No 488
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.93 E-value=0.65 Score=44.70 Aligned_cols=36 Identities=22% Similarity=0.118 Sum_probs=32.5
Q ss_pred CCCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeC
Q 039105 25 IGSLPSVIVIGGGISGLAAARILYDASFKVVLLESR 60 (493)
Q Consensus 25 ~~~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~ 60 (493)
.-..+.|+|||.|..|..+|..|...|.+|.++|.+
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~d 252 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEID 252 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345688999999999999999999999999999975
No 489
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.85 E-value=0.5 Score=45.65 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=31.6
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~~ 61 (493)
....|+|||+|-.|..+|..|...|. +|.+++++.
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 56789999999999999999999998 899998863
No 490
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=86.78 E-value=0.52 Score=43.78 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=29.3
Q ss_pred cEEEECc-CHHHHHHHHHHHhCC--CcEEEEeeCC
Q 039105 30 SVIVIGG-GISGLAAARILYDAS--FKVVLLESRD 61 (493)
Q Consensus 30 dv~IIGa-GiaGLsaA~~L~~~G--~~V~v~E~~~ 61 (493)
+|+|||| |-.|.+.|+.|++.| .+|.++|...
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999999988 6899999865
No 491
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=86.70 E-value=0.68 Score=43.17 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=30.5
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
+..+|+|||+|=.|-.+|..|++.|. +++|+|..
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D 67 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 67 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCC
Confidence 45789999999999999999999997 69999883
No 492
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=86.66 E-value=0.55 Score=43.01 Aligned_cols=33 Identities=18% Similarity=0.248 Sum_probs=29.2
Q ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCcEEEEeeC
Q 039105 28 LPSVIVIGGGISGLAAARILYDA--SFKVVLLESR 60 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~--G~~V~v~E~~ 60 (493)
+.+|.|||+|.-|.+.|..|+++ |++|.+++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~ 40 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRS 40 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCC
Confidence 46799999999999999999988 6789998874
No 493
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=86.55 E-value=0.58 Score=41.87 Aligned_cols=34 Identities=32% Similarity=0.328 Sum_probs=30.4
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeeC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASF-KVVLLESR 60 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~-~V~v~E~~ 60 (493)
...+|+|||+|-.|..+|..|++.|. +++|+|..
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999997 68999884
No 494
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=86.43 E-value=0.7 Score=42.53 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=31.1
Q ss_pred CCCcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGG-GISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
+++.|+|+|| |--|...+..|.++|++|.++.++.
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 3 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 3567999997 9999999999999999999998853
No 495
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=86.36 E-value=0.42 Score=47.37 Aligned_cols=36 Identities=22% Similarity=0.383 Sum_probs=31.4
Q ss_pred CCCCcEEEECcCHHHHH-HHHHHHhCCCcEEEEeeCC
Q 039105 26 GSLPSVIVIGGGISGLA-AARILYDASFKVVLLESRD 61 (493)
Q Consensus 26 ~~~~dv~IIGaGiaGLs-aA~~L~~~G~~V~v~E~~~ 61 (493)
...++|.|||.|-+|++ +|..|.++|++|++.|...
T Consensus 16 ~~~~~i~viG~G~sG~s~~A~~l~~~G~~V~~~D~~~ 52 (475)
T 1p3d_A 16 RRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIAD 52 (475)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCC
T ss_pred ccCCEEEEEeecHHHHHHHHHHHHhCCCEEEEECCCC
Confidence 34567999999999998 8899999999999999854
No 496
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=86.19 E-value=0.79 Score=42.18 Aligned_cols=40 Identities=23% Similarity=0.219 Sum_probs=31.0
Q ss_pred CccCceEEeeccccCcCcchhHHHHHHHHHHHHHHHHHHHh
Q 039105 424 APLGNLFFGGEAVSMEHQGSVHGAYSAGVMAAQNCQKYLLK 464 (493)
Q Consensus 424 ~~~~~l~~aGd~~~~~~~g~~egA~~sg~~aa~~i~~~l~~ 464 (493)
|.+||+|.|||.+... +..+--|+..|..||..|..+|..
T Consensus 262 Ts~p~IyA~GDv~~~~-~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 262 TSEKNIYLAGETTTQG-PSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CSSTTEEECSHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeccCCCc-chHHHHHHHHHHHHHHHHHHHHhh
Confidence 4578999999987542 234667889999999999888754
No 497
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=86.03 E-value=0.85 Score=42.73 Aligned_cols=35 Identities=17% Similarity=0.176 Sum_probs=31.7
Q ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 27 SLPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..+.|.|||.|-.|...|..|+..|.+|.+++++.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 45679999999999999999999999999999854
No 498
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.97 E-value=0.91 Score=41.59 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=30.9
Q ss_pred CcEEEECc-CHHHHHHHHHHHhCCCcEEEEeeCCCC
Q 039105 29 PSVIVIGG-GISGLAAARILYDASFKVVLLESRDRL 63 (493)
Q Consensus 29 ~dv~IIGa-GiaGLsaA~~L~~~G~~V~v~E~~~~~ 63 (493)
++|+|.|| |.-|-..+.+|.++|++|.++-|++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 36999998 999999999999999999999876543
No 499
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=86.00 E-value=0.15 Score=44.02 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=30.6
Q ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeeCC
Q 039105 28 LPSVIVIGGGISGLAAARILYDASFKVVLLESRD 61 (493)
Q Consensus 28 ~~dv~IIGaGiaGLsaA~~L~~~G~~V~v~E~~~ 61 (493)
..+|.|||+|--|...|..|.+.|++|.+++++.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 52 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNP 52 (201)
Confidence 3579999999999999999999999999998854
No 500
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=85.62 E-value=0.51 Score=44.09 Aligned_cols=35 Identities=17% Similarity=0.143 Sum_probs=30.0
Q ss_pred CCCcEEEEC-cCHHHHHHHHHHHhCC--CcEEEEeeCC
Q 039105 27 SLPSVIVIG-GGISGLAAARILYDAS--FKVVLLESRD 61 (493)
Q Consensus 27 ~~~dv~IIG-aGiaGLsaA~~L~~~G--~~V~v~E~~~ 61 (493)
++.+|+||| +|..|.+.|+.|+++| .+|.+++...
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~ 44 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN 44 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 346899999 7999999999999998 7899999754
Done!