Query 039106
Match_columns 345
No_of_seqs 251 out of 1470
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 10:21:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039106.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039106hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xg2_A Pectinesterase 1; prote 100.0 2.4E-82 8.3E-87 612.9 23.8 272 62-345 2-309 (317)
2 1gq8_A Pectinesterase; hydrola 100.0 4.5E-82 1.5E-86 611.5 25.4 273 61-345 5-313 (319)
3 2nsp_A Pectinesterase A; micha 100.0 6E-74 2.1E-78 559.6 23.3 270 62-343 3-341 (342)
4 3uw0_A Pectinesterase; right-h 100.0 2.8E-73 9.7E-78 558.1 24.4 270 62-342 30-364 (364)
5 3grh_A YBHC, acyl-COA thioeste 100.0 1.1E-65 3.8E-70 508.5 22.5 248 60-310 72-416 (422)
6 1ru4_A Pectate lyase, PEL9A; p 99.6 1E-14 3.5E-19 144.7 20.7 182 61-275 13-227 (400)
7 1dbg_A Chondroitinase B; beta 99.2 2.2E-10 7.6E-15 116.6 17.1 157 64-252 25-207 (506)
8 2inu_A Insulin fructotransfera 98.4 1.7E-06 5.8E-11 85.4 10.8 118 95-220 59-203 (410)
9 2pyg_A Poly(beta-D-mannuronate 97.7 0.00043 1.5E-08 66.7 13.8 52 75-131 18-78 (377)
10 1pxz_A Major pollen allergen J 97.5 0.0015 5E-08 63.5 13.6 147 77-250 56-222 (346)
11 1bhe_A PEHA, polygalacturonase 97.2 0.01 3.5E-07 57.8 16.5 52 64-122 14-69 (376)
12 1hg8_A Endopolygalacturonase; 96.9 0.029 1E-06 54.1 16.4 28 76-105 8-35 (349)
13 3eqn_A Glucan 1,3-beta-glucosi 96.9 0.04 1.4E-06 58.2 18.0 55 76-133 66-129 (758)
14 3vmv_A Pectate lyase; polysacc 96.9 0.016 5.5E-07 55.7 13.9 143 78-252 30-203 (326)
15 1nhc_A Polygalacturonase I; be 96.8 0.015 5.2E-07 55.8 13.3 59 151-220 102-172 (336)
16 1air_A Pectate lyase C, PELC; 96.7 0.026 8.8E-07 54.8 14.5 119 76-222 26-188 (353)
17 2iq7_A Endopolygalacturonase; 96.7 0.023 7.9E-07 54.6 13.7 28 76-105 8-35 (339)
18 3zsc_A Pectate trisaccharide-l 96.6 0.016 5.5E-07 56.0 12.2 141 79-252 38-193 (340)
19 1pcl_A Pectate lyase E; lyase 96.5 0.099 3.4E-06 50.7 17.0 121 106-252 75-226 (355)
20 1h80_A IOTA-carrageenase; hydr 96.4 0.12 3.9E-06 52.0 17.2 200 75-289 38-286 (464)
21 1ia5_A Polygalacturonase; glyc 96.4 0.037 1.3E-06 53.2 12.9 41 76-122 12-53 (339)
22 1qcx_A Pectin lyase B; beta-he 96.3 0.041 1.4E-06 53.5 12.9 66 151-220 125-197 (359)
23 1rmg_A Rgase A, rhamnogalactur 96.3 0.061 2.1E-06 53.2 14.3 42 76-122 37-80 (422)
24 1idk_A Pectin lyase A; signal, 96.2 0.033 1.1E-06 54.2 11.6 83 114-220 108-197 (359)
25 2qy1_A Pectate lyase II; GAG l 96.1 0.073 2.5E-06 51.1 13.5 143 77-252 24-203 (330)
26 1czf_A Polygalacturonase II; b 96.1 0.096 3.3E-06 50.8 14.5 28 76-105 35-62 (362)
27 2uvf_A Exopolygalacturonase; G 96.1 0.096 3.3E-06 54.2 15.2 122 152-278 334-490 (608)
28 3gq8_A Preneck appendage prote 96.1 0.17 5.8E-06 52.4 16.6 46 76-131 39-86 (609)
29 1vbl_A Pectate lyase 47; PL 47 96.0 0.22 7.5E-06 49.3 16.6 117 113-252 131-281 (416)
30 2o04_A Pectate lyase, PL; hexa 96.0 0.19 6.5E-06 49.5 16.0 116 113-252 126-275 (399)
31 1pe9_A Pectate lyase A; parall 95.9 0.11 3.8E-06 50.5 13.8 144 79-252 44-237 (361)
32 3jur_A EXO-poly-alpha-D-galact 95.7 0.13 4.4E-06 51.4 13.4 41 76-121 44-85 (448)
33 3gqn_A Preneck appendage prote 95.2 0.3 1E-05 51.7 14.7 46 76-131 39-86 (772)
34 1k5c_A Endopolygalacturonase; 94.6 0.43 1.5E-05 45.6 13.1 37 241-277 209-250 (335)
35 1x0c_A Isopullulanase; glycosi 90.7 4 0.00014 41.6 14.4 105 154-277 290-404 (549)
36 1ogo_X Dextranase; hydrolase, 87.6 12 0.0004 38.5 15.2 100 155-277 331-442 (574)
37 1gq8_A Pectinesterase; hydrola 87.4 1.9 6.6E-05 41.0 8.7 82 181-277 85-174 (319)
38 1xg2_A Pectinesterase 1; prote 86.9 1.9 6.4E-05 41.0 8.3 81 181-277 81-170 (317)
39 3uw0_A Pectinesterase; right-h 85.0 3 0.0001 40.4 8.7 80 183-276 115-218 (364)
40 2x6w_A Tail spike protein; vir 83.7 2.9 9.9E-05 43.1 8.4 42 76-122 64-119 (600)
41 2vbk_A Tailspike-protein; vira 83.4 32 0.0011 34.4 15.3 46 75-124 67-118 (514)
42 1vcl_A Hemolytic lectin CEL-II 82.8 0.0088 3E-07 59.6 -10.5 90 66-170 295-393 (432)
43 2nsp_A Pectinesterase A; micha 80.9 3.8 0.00013 39.3 7.6 79 183-276 89-191 (342)
44 3eqn_A Glucan 1,3-beta-glucosi 78.2 12 0.00042 39.5 11.0 102 75-200 416-531 (758)
45 3grh_A YBHC, acyl-COA thioeste 77.3 12 0.00042 36.9 10.0 87 183-277 194-297 (422)
46 1ru4_A Pectate lyase, PEL9A; p 69.9 14 0.00049 35.9 8.6 43 151-204 131-175 (400)
47 1ogo_X Dextranase; hydrolase, 66.1 1.2E+02 0.0041 30.9 17.0 85 155-252 354-442 (574)
48 1bhe_A PEHA, polygalacturonase 66.0 17 0.00057 34.8 8.0 20 151-170 153-173 (376)
49 1k5c_A Endopolygalacturonase; 60.4 33 0.0011 32.4 8.9 102 155-278 104-221 (335)
50 1czf_A Polygalacturonase II; b 57.1 60 0.0021 30.9 10.2 35 155-200 133-167 (362)
51 1dbg_A Chondroitinase B; beta 49.3 45 0.0015 33.5 8.1 45 150-202 119-170 (506)
52 1hg8_A Endopolygalacturonase; 47.5 1E+02 0.0034 29.1 9.9 20 151-170 104-126 (349)
53 2iq7_A Endopolygalacturonase; 45.9 1.1E+02 0.0036 28.7 9.8 54 114-170 68-122 (339)
54 1rmg_A Rgase A, rhamnogalactur 45.5 1.2E+02 0.004 29.5 10.3 37 241-278 234-274 (422)
55 1nhc_A Polygalacturonase I; be 44.7 1.2E+02 0.004 28.4 9.9 119 152-278 126-254 (336)
56 1ia5_A Polygalacturonase; glyc 42.0 1.3E+02 0.0045 28.1 9.8 20 151-170 106-126 (339)
57 3gq8_A Preneck appendage prote 30.5 2.2E+02 0.0077 29.2 9.8 99 150-253 136-246 (609)
58 2uvf_A Exopolygalacturonase; G 27.2 1.1E+02 0.0036 31.3 6.8 60 190-253 422-490 (608)
59 1x0c_A Isopullulanase; glycosi 27.1 2.2E+02 0.0076 28.6 9.1 84 157-253 318-405 (549)
60 3gqn_A Preneck appendage prote 24.9 3.4E+02 0.012 28.7 10.1 99 150-253 136-246 (772)
61 1idk_A Pectin lyase A; signal, 23.0 4.7E+02 0.016 24.7 10.2 85 185-278 126-233 (359)
No 1
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=100.00 E-value=2.4e-82 Score=612.87 Aligned_cols=272 Identities=33% Similarity=0.593 Sum_probs=254.0
Q ss_pred CceEEEcCCCCCCCCccHHHHHHhCCCCCcceEEEEEeCceeeeeEeecccCceEEEEecCCCceEEecCCCcccCCCCC
Q 039106 62 CKTIKVNKNPRLGNFVTVQKAINSLPVINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSG 141 (345)
Q Consensus 62 ~~~ivV~~d~G~g~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G 141 (345)
+.+++|++| |+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.||+|||+|+++++|+|+++.+..+ |
T Consensus 2 ~~~i~V~~d-Gsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~----g 76 (317)
T 1xg2_A 2 IANAVVAQD-GTGDYQTLAEAVAAAPDKSKTRYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVD----G 76 (317)
T ss_dssp CCSEEECTT-SCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTT----T
T ss_pred CceEEECCC-CCCCcccHHHHHhhcccCCCceEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccC----C
Confidence 357999999 99999999999999999999999999999999999999999999999999999999999986533 3
Q ss_pred CCCCCcccceeeeecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEe---------------------
Q 039106 142 RPLGTYASATFAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFI--------------------- 200 (345)
Q Consensus 142 ~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~--------------------- 200 (345)
.+|+.++||.|.+++|+++||||+|+++ +.++|||||++++|+++||||+|+
T Consensus 77 --~~t~~satv~v~a~~f~~~~lt~~Nt~g-----~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I~ 149 (317)
T 1xg2_A 77 --STTFRSATLAAVGQGFILQDICIQNTAG-----PAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVT 149 (317)
T ss_dssp --CCSGGGCSEEECSTTCEEESCEEEECCC-----GGGCCCCSEEECCTTEEEESCEEECSTTCEEECSSEEEEESCEEE
T ss_pred --CcccceeEEEEECCCEEEEEeEEecccC-----CccCceEEEEEeCCcEEEEEeEeCccccceeecCccEEEEeeEEE
Confidence 7899999999999999999999999984 456899999999999999999998
Q ss_pred ceeeeEeccceeEEeeeEEEEee---CCCCeeEeeccCCCCCcceeEEEccEEeecc---------cEEeeecccccceE
Q 039106 201 GSVDFIFGNGLSFYEDCHLHAIT---NSYGALTAQKRGSLLEETGFSFVKCKVTGSG---------ALYLGRAWGTFSRV 268 (345)
Q Consensus 201 G~VDFIfG~~~a~f~~c~i~~~~---~~~g~ItA~~r~~~~~~~G~vf~nc~it~~g---------~~yLGRpW~~~srv 268 (345)
|+||||||+|+++||+|+|++++ ++.++||||+|+++++++||||+||+|++++ ++||||||++|+||
T Consensus 150 G~vDFIfG~~~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr~ 229 (317)
T 1xg2_A 150 GTVDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRT 229 (317)
T ss_dssp ESSSCEEECCEEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECTTTGGGTTTSCEEEECCSSTTCEE
T ss_pred eceeEEcCCceEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCCCccccccceeEEeecccCCCceE
Confidence 99999999999999999999975 3568999999999999999999999999865 69999999999999
Q ss_pred EEEcccCCcccccCCCCCCCCCCCcceeEEEEecccCCCCCCCCceeecc--cCC-HHHHcCCcccccccCCCCCCCCCC
Q 039106 269 VFAYTYMDKIITPRGWYDWGDKNREMTVFYGQYKCSGPGAYYGGRVSWSR--ELT-QEEAEPFISVEFIDGHQWLPSHSL 345 (345)
Q Consensus 269 vf~~t~~~~~I~p~GW~~w~~~~~~~t~~f~EY~n~GpGa~~~~Rv~w~~--~Lt-~~ea~~ft~~~fi~g~~W~~~~~~ 345 (345)
|||+|+|+++|+|+||.+|+++.+.++++|+||+|+||||++++||+|++ +|+ ++||++|+..+||+|++|+|.+++
T Consensus 230 v~~~t~~~~~I~p~GW~~w~~~~~~~t~~~~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~~ 309 (317)
T 1xg2_A 230 VVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGV 309 (317)
T ss_dssp EEESCEECTTBCTTCSCCSSTTTTTTTCEEEEESCBSTTCCCTTSCCCTTEEEECCHHHHGGGSHHHHSCTHHHHGGGCC
T ss_pred EEEecccCCcccccccccCCCCCCcCceEEEEEcCCCCCCCcccccccccccccCCHHHHHHhhHHhhcCCCCCcCCCCc
Confidence 99999999999999999999888889999999999999999999999996 664 689999999999999999998763
No 2
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=100.00 E-value=4.5e-82 Score=611.49 Aligned_cols=273 Identities=36% Similarity=0.644 Sum_probs=254.8
Q ss_pred CCceEEEcCCCCCCCCccHHHHHHhCCCCCcceEEEEEeCceeeeeEeecccCceEEEEecCCCceEEecCCCcccCCCC
Q 039106 61 PCKTIKVNKNPRLGNFVTVQKAINSLPVINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQS 140 (345)
Q Consensus 61 ~~~~ivV~~d~G~g~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~ 140 (345)
++.+++|++| |+|+|+|||+||+++|+++++|++|+|+||+|+|+|.|++.||+|||+|+++++|+|+++.+..+
T Consensus 5 ~~~~i~V~~d-Gsg~f~TIq~AI~aap~~~~~~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~---- 79 (319)
T 1gq8_A 5 VGPNVVVAAD-GSGDYKTVSEAVAAAPEDSKTRYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQD---- 79 (319)
T ss_dssp SCCSEEECTT-SCSSBSSHHHHHHHSCSSCSSCEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTT----
T ss_pred ccceEEECCC-CCCCccCHHHHHHhccccCCceEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccC----
Confidence 4578999999 99999999999999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCCCcccceeeeecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEe--------------------
Q 039106 141 GRPLGTYASATFAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFI-------------------- 200 (345)
Q Consensus 141 G~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~-------------------- 200 (345)
| .+|+.++||.|.+++|+++||||+|+++ +.++|||||++++|+++||||+|+
T Consensus 80 g--~~t~~satv~v~a~~f~~~nlt~~Nt~g-----~~~~qAvAl~v~~d~~~f~~c~f~g~QDTLy~~~~r~~~~~c~I 152 (319)
T 1gq8_A 80 G--STTFNSATVAAVGAGFLARDITFQNTAG-----AAKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFINCFI 152 (319)
T ss_dssp T--CCTGGGCSEEECSTTCEEEEEEEEECCC-----GGGCCCCSEEECCTTEEEEEEEEECSTTCEEECSSEEEEESCEE
T ss_pred C--CCccceEEEEEECCCEEEEEeEeEccCC-----CcCCceEEEEecCCcEEEEEeEECccceeeeecCccEEEEecEE
Confidence 3 7899999999999999999999999984 456899999999999999999998
Q ss_pred -ceeeeEeccceeEEeeeEEEEee---CCCCeeEeeccCCCCCcceeEEEccEEeecc---------cEEeeecccccce
Q 039106 201 -GSVDFIFGNGLSFYEDCHLHAIT---NSYGALTAQKRGSLLEETGFSFVKCKVTGSG---------ALYLGRAWGTFSR 267 (345)
Q Consensus 201 -G~VDFIfG~~~a~f~~c~i~~~~---~~~g~ItA~~r~~~~~~~G~vf~nc~it~~g---------~~yLGRpW~~~sr 267 (345)
|+||||||+|+++||+|+|++++ ++.++||||+|+++++++||||+||+|++++ ++||||||++|+|
T Consensus 153 ~G~vDFIfG~~~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~~~~~~~~~~~~yLGRpW~~~sr 232 (319)
T 1gq8_A 153 AGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSR 232 (319)
T ss_dssp EESSSCEEESCEEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECTTTGGGGGGSCEEEECCSSTTCE
T ss_pred EeeeeEEecCCcEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCCCccccccceeEEecccCCCcce
Confidence 99999999999999999999975 3568999999999999999999999999865 6999999999999
Q ss_pred EEEEcccCCcccccCCCCCCCCCCCcceeEEEEecccCCCCCCCCceeecc--cCC-HHHHcCCcccccccCCCCCCCCC
Q 039106 268 VVFAYTYMDKIITPRGWYDWGDKNREMTVFYGQYKCSGPGAYYGGRVSWSR--ELT-QEEAEPFISVEFIDGHQWLPSHS 344 (345)
Q Consensus 268 vvf~~t~~~~~I~p~GW~~w~~~~~~~t~~f~EY~n~GpGa~~~~Rv~w~~--~Lt-~~ea~~ft~~~fi~g~~W~~~~~ 344 (345)
||||+|+|+++|+|+||.+|+++.+.++++|+||+|+||||++++||+|++ +|+ ++||++|+..+||+|++|+|.++
T Consensus 233 ~v~~~t~~~~~I~p~GW~~w~~~~~~~t~~y~Ey~n~GpGa~~~~Rv~w~~~~~l~~~~ea~~~t~~~~i~g~~W~p~~~ 312 (319)
T 1gq8_A 233 TVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATT 312 (319)
T ss_dssp EEEESCEECTTBCTTCCCCSSTTTTTTTCEEEEESCBSGGGCCTTCCCCTTEEECCCHHHHHTTSHHHHSCGGGTSGGGT
T ss_pred EEEEeccCCCcccccccCcCCCCCCCCeeEEEEEccccCCCCcccccccccccccCCHHHHHhhhHHhhcCCCCCcCCCC
Confidence 999999999999999999999888889999999999999999999999996 675 68999999999999999999876
Q ss_pred C
Q 039106 345 L 345 (345)
Q Consensus 345 ~ 345 (345)
+
T Consensus 313 ~ 313 (319)
T 1gq8_A 313 F 313 (319)
T ss_dssp S
T ss_pred c
Confidence 3
No 3
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=100.00 E-value=6e-74 Score=559.55 Aligned_cols=270 Identities=28% Similarity=0.458 Sum_probs=237.0
Q ss_pred CceEEEc--CCCCCCCCccHHHHHHhCCCCCcceEEEEEeCceeeeeEeecccCceEEEEecCCCceEEecCCCcccCCC
Q 039106 62 CKTIKVN--KNPRLGNFVTVQKAINSLPVINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQ 139 (345)
Q Consensus 62 ~~~ivV~--~d~G~g~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~ 139 (345)
..+++|+ +| |+|+|+|||+||+++|+++ +|++|+|+||+|+|+|.|+ |++|||+|+++++|+|+++..+....+
T Consensus 3 ~~~~vV~~~~~-g~g~f~TIq~Ai~aap~~~-~~~~I~I~~G~Y~E~V~I~--k~~Itl~G~g~~~tiI~~~~~~~~~~~ 78 (342)
T 2nsp_A 3 TYNAVVSKSSS-DGKTFKTIADAIASAPAGS-TPFVILIKNGVYNERLTIT--RNNLHLKGESRNGAVIAAATAAGTLKS 78 (342)
T ss_dssp CCSEEECSCSS-SCSCBSSHHHHHHTSCSSS-SCEEEEECSEEEECCEEEC--STTEEEEESCTTTEEEEECCCTTCBCT
T ss_pred ccEEEEccCCC-CCCCcchHHHHHHhcccCC-CcEEEEEeCCEEEEEEEEe--cCeEEEEecCCCCeEEEeccccccccc
Confidence 4679999 88 9999999999999999987 8999999999999999995 578999999999999999987655555
Q ss_pred CCCCCCCcccceeeeecCceEEEeeeeecCCCC--------CC-CCCCCCceEEE--EEeCCeeEEEceEEe--------
Q 039106 140 SGRPLGTYASATFAVNSPYFIAKNITFKNKAPL--------PP-SGALGKQAVAF--RISADTAAFTGCKFI-------- 200 (345)
Q Consensus 140 ~G~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~--------~~-~g~~~~QAvAl--~v~gd~~~f~nC~~~-------- 200 (345)
+|...||+.++||.|.+++|+++||||+|+++. .. .+..++||||| ++++|+++||||+|+
T Consensus 79 ~g~~~gT~~satv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~ 158 (342)
T 2nsp_A 79 DGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYV 158 (342)
T ss_dssp TSCBCHHHHTCSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEE
T ss_pred ccCcccccceeEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEE
Confidence 566678999999999999999999999999831 01 12346899999 889999999999998
Q ss_pred -------------ceeeeEeccceeEEeeeEEEEeeCC-------CCeeEeeccCCCCCcceeEEEccEEeec------c
Q 039106 201 -------------GSVDFIFGNGLSFYEDCHLHAITNS-------YGALTAQKRGSLLEETGFSFVKCKVTGS------G 254 (345)
Q Consensus 201 -------------G~VDFIfG~~~a~f~~c~i~~~~~~-------~g~ItA~~r~~~~~~~G~vf~nc~it~~------g 254 (345)
|+||||||+|+++||+|+|+++... .|+||||+| ++.+++||||+||+|+++ +
T Consensus 159 ~~gr~~~~~c~I~G~vDFIFG~a~a~f~~c~i~~~~~~~~~~~~~~g~ItA~~~-~~~~~~G~vf~~c~i~~~~~~~~~~ 237 (342)
T 2nsp_A 159 SGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPST-NINQKYGLVITNSRVIRESDSVPAK 237 (342)
T ss_dssp CSSEEEEESCEEEESEEEEEESSEEEEESCEEEECCCTTSCTTSCCEEEEEECC-BTTCSCCEEEESCEEEESSTTSCTT
T ss_pred CCCCEEEEcCEEEeceEEEeCCceEEEecCEEEEecCcccccccCceEEEccCC-CCCCCCEEEEEcCEEecCCCCCccc
Confidence 9999999999999999999997521 289999987 578999999999999986 3
Q ss_pred cEEeeecccccc--------------eEEEEcccCCcccccCCCCCCCCCC--------CcceeEEEEecccCCCCCCCC
Q 039106 255 ALYLGRAWGTFS--------------RVVFAYTYMDKIITPRGWYDWGDKN--------REMTVFYGQYKCSGPGAYYGG 312 (345)
Q Consensus 255 ~~yLGRpW~~~s--------------rvvf~~t~~~~~I~p~GW~~w~~~~--------~~~t~~f~EY~n~GpGa~~~~ 312 (345)
++||||||++|+ |||||+|+|+++|+ ||.+|+++. ..++++|+||+|+||||+++
T Consensus 238 ~~yLGRpW~~~s~~~~~~~a~p~~~~r~vf~~t~~~~~I~--GW~~w~~~~~~~~~~~~~~~~~~f~EY~n~GpGa~~~- 314 (342)
T 2nsp_A 238 SYGLGRPWHPTTTFSDGRYADPNAIGQTVFLNTSMDNHIY--GWDKMSGKDKNGNTIWFNPEDSRFFEYKSYGAGATVS- 314 (342)
T ss_dssp CEEEECCCCCEEEETTEEEECTTBCCEEEEESCEECTTEE--ECCCEEEECTTSCEEEECGGGSEEEEESCBSTTCCCS-
T ss_pred cEEEEeccccccccccccccCCccceeEEEEccccCcccc--cccccCCCCccCceeecccCccEEEEEecccCCCCCC-
Confidence 799999999999 99999999999999 999997532 22468899999999999864
Q ss_pred ceeecccCCHHHHcCCcccccccCCCCCCCC
Q 039106 313 RVSWSRELTQEEAEPFISVEFIDGHQWLPSH 343 (345)
Q Consensus 313 Rv~w~~~Lt~~ea~~ft~~~fi~g~~W~~~~ 343 (345)
+|.++|+++||++|+..+||+| |+|..
T Consensus 315 --~~~~~l~~~ea~~~t~~~~i~~--W~p~~ 341 (342)
T 2nsp_A 315 --KDRRQLTDAQAAEYTQSKVLGD--WTPTL 341 (342)
T ss_dssp --TTSCBCCHHHHGGGSHHHHHTT--CCCCC
T ss_pred --CCceECCHHHHHhhhHHhhhcc--CCCCC
Confidence 3457899999999999999974 99864
No 4
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=100.00 E-value=2.8e-73 Score=558.06 Aligned_cols=270 Identities=30% Similarity=0.528 Sum_probs=223.1
Q ss_pred CceEEEcCCCCCCCCccHHHHHHhCCCCCcceEEEEEeCceeeeeEeecccCceEEEEecCCCceEEecCCCcccCCCCC
Q 039106 62 CKTIKVNKNPRLGNFVTVQKAINSLPVINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSG 141 (345)
Q Consensus 62 ~~~ivV~~d~G~g~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G 141 (345)
..+++|++|+|+|+|+|||+||+++|+++ +|++|+|+||+|+|+|.|+ ||+|||+|+++++|+|+++.++....++|
T Consensus 30 ~~~~~V~~~~g~g~f~TIq~Ai~aa~~~~-~~~~I~I~~G~Y~E~v~I~--k~~itl~G~g~~~TiIt~~~~~~~~~~~g 106 (364)
T 3uw0_A 30 QYNAVVSTTPQGDEFSSINAALKSAPKDD-TPFIIFLKNGVYTERLEVA--RSHVTLKGENRDGTVIGANTAAGMLNPQG 106 (364)
T ss_dssp --------------CCCHHHHHHHSCSSS-SCEEEEECSEEECCCEEEC--STTEEEEESCTTTEEEEECCCTTSBCTTC
T ss_pred CceEEEcCCCCCCCcccHHHHHhhcccCC-CcEEEEEeCCEEEEEEEEc--CCeEEEEecCCCCeEEEcccccccccccc
Confidence 46799999878999999999999999986 7899999999999999995 67899999999999999998876656667
Q ss_pred CCCCCcccceeeeecCceEEEeeeeecCCCCC---------CCCCCCCceEEEEE--eCCeeEEEceEEe----------
Q 039106 142 RPLGTYASATFAVNSPYFIAKNITFKNKAPLP---------PSGALGKQAVAFRI--SADTAAFTGCKFI---------- 200 (345)
Q Consensus 142 ~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~~---------~~g~~~~QAvAl~v--~gd~~~f~nC~~~---------- 200 (345)
...||+.++||.|.+++|+++||||+|+++.+ ..+..++|||||++ ++|+++||||+|+
T Consensus 107 ~~~gt~~saTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~ 186 (364)
T 3uw0_A 107 EKWGTSGSSTVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT 186 (364)
T ss_dssp SBCCTTTCCSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT
T ss_pred ccccccCeeEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC
Confidence 77899999999999999999999999998631 11224689999999 5999999999997
Q ss_pred ------------ceeeeEeccceeEEeeeEEEEeeC-----CCCeeEeeccCCCCCcceeEEEccEEeec-----ccEEe
Q 039106 201 ------------GSVDFIFGNGLSFYEDCHLHAITN-----SYGALTAQKRGSLLEETGFSFVKCKVTGS-----GALYL 258 (345)
Q Consensus 201 ------------G~VDFIfG~~~a~f~~c~i~~~~~-----~~g~ItA~~r~~~~~~~G~vf~nc~it~~-----g~~yL 258 (345)
|+||||||+|+++||+|+|+++.. +.|+||||+| ++.+++||||+||+|+++ +++||
T Consensus 187 ~gr~yf~~c~I~GtvDFIFG~a~a~f~~c~i~~~~~~~~~~~~g~ITA~~~-~~~~~~G~vf~~c~i~~~~~~~~~~~yL 265 (364)
T 3uw0_A 187 GSRSYFSDCEISGHVDFIFGSGITVFDNCNIVARDRSDIEPPYGYITAPST-LTTSPYGLIFINSRLTKEPGVPANSFAL 265 (364)
T ss_dssp TCEEEEESCEEEESEEEEEESSEEEEESCEEEECCCSSCSSCCEEEEEECC-CTTCSCCEEEESCEEEECTTCCSSCEEE
T ss_pred CCCEEEEcCEEEcCCCEECCcceEEEEeeEEEEeccCcccCCccEEEeCCc-CCCCCcEEEEEeeEEecCCCCccccEEe
Confidence 999999999999999999999742 3599999987 567899999999999985 36899
Q ss_pred eeccccc--------------ceEEEEcccCCcccccCCCCCCCCC-CCc-------ceeEEEEecccCCCCCCCCceee
Q 039106 259 GRAWGTF--------------SRVVFAYTYMDKIITPRGWYDWGDK-NRE-------MTVFYGQYKCSGPGAYYGGRVSW 316 (345)
Q Consensus 259 GRpW~~~--------------srvvf~~t~~~~~I~p~GW~~w~~~-~~~-------~t~~f~EY~n~GpGa~~~~Rv~w 316 (345)
||||++| +|||||+|+|+++| +||.+|++. ... ++++|+||+|+||||+++.+
T Consensus 266 GRPW~~~s~~~~g~yadp~a~~rvVf~~s~m~~~I--~GW~~w~~~~~~~~~~~~~~~~~~f~Ey~n~GpGa~~~~~--- 340 (364)
T 3uw0_A 266 GRPWHPTTTFADGRYADPAAIGQSVFINTTMDDHI--YGWDKMSGKDKQGEKIWFYPQDSRFFEANSQGPGAAINEG--- 340 (364)
T ss_dssp ECCCCCEEECSSCEEECTTCCCEEEEESCEECTTE--EECCCEEEECTTSCEEEECGGGSEEEEESCBSTTCCCSTT---
T ss_pred ccccccccccccccccccCccceEEEEeCCCCcee--ecccccCCCCccCceeeeccCCceEEEEeCCCCCCCcCCc---
Confidence 9999985 39999999999999 999999753 222 34679999999999986443
Q ss_pred cccCCHHHHcCCcccccccCCCCCCC
Q 039106 317 SRELTQEEAEPFISVEFIDGHQWLPS 342 (345)
Q Consensus 317 ~~~Lt~~ea~~ft~~~fi~g~~W~~~ 342 (345)
+++|+++||++|+..+||+| |+|.
T Consensus 341 r~~ls~~ea~~~t~~~~l~g--W~P~ 364 (364)
T 3uw0_A 341 RRQLSAEQLKAFTLPMIFPD--WAVH 364 (364)
T ss_dssp SCBCCHHHHGGGSHHHHSTT--CCC-
T ss_pred eeECCHHHHhhccHHHhhcC--CCCC
Confidence 35899999999999999975 9984
No 5
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=100.00 E-value=1.1e-65 Score=508.46 Aligned_cols=248 Identities=19% Similarity=0.233 Sum_probs=208.7
Q ss_pred CCCceEEEcCCCCCC--CCccHHHHHHhCC-CCCcceEEEEEeCceeeeeEeecccCceEEEEecCCCceEEecCCC---
Q 039106 60 KPCKTIKVNKNPRLG--NFVTVQKAINSLP-VINLCRVVIFISAGTYREKVEIPTTMAYITMIGAGADNTVIEWDDT--- 133 (345)
Q Consensus 60 ~~~~~ivV~~d~G~g--~f~TIq~AI~aap-~~~~~r~~I~I~~G~Y~E~v~I~~~k~~ItL~G~g~~~tiI~~~~~--- 133 (345)
.++.+++|++| |+| +|+|||+||+++| .++++|++|+|+||+|+|+|.|++.|++|+|+|+|.++++|+...+
T Consensus 72 ~~~~~ivVa~d-GsG~~~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E~V~Ip~~K~~ItL~G~G~~~t~Iti~~~~~~ 150 (422)
T 3grh_A 72 PAQPDFVVGPA-GTQGVTHTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDG 150 (422)
T ss_dssp CSSCSEEECST-TCTTCCBSSHHHHHHHHHTTCCSSCEEEEECSEEEESCEEECCCSSCEEEEECSSSGGGEEEEECCCT
T ss_pred CCCccEEEeCC-CCCCcCcCCHHHHHHhchhcCCCccEEEEEeCCeEeeeEEecCCCCcEEEEeccCCCceEEEeecccc
Confidence 35678999999 988 9999999999996 5678899999999999999999999999999999998766543211
Q ss_pred -------------cccC--------------CCCCCCCCCcccceeeeecCceEEEeeeeecCCCCCCCCCCCCceEEEE
Q 039106 134 -------------ADRM--------------GQSGRPLGTYASATFAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFR 186 (345)
Q Consensus 134 -------------~~~~--------------~~~G~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~ 186 (345)
.+.. ...+..++|+.||||.|.+++|+++||||+|+++... +..++|||||+
T Consensus 151 ~~~~~d~~~~~n~~G~~~~G~~aw~tf~~~~~~~sat~gT~~SAT~~V~g~~F~a~niTf~Ntag~~~-~~~~~QAVAL~ 229 (422)
T 3grh_A 151 GMSPADWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENTLGDSV-DAGNHPAVALR 229 (422)
T ss_dssp TSCHHHHHHHHCGGGSSCTTSTTHHHHHHHHTCCSSSCCGGGCCSEEECCTTCEEEEEEEEETTGGGS-CSSCCCCCSEE
T ss_pred cccccccccccccccccccCccccccccccccccccceeccceEEEEEECCCEEEEeeEEEeCCCCCC-CCCCCceEEEE
Confidence 0000 0012357899999999999999999999999997532 13468999999
Q ss_pred EeCCeeEEEceEEe---------------------------------ceeeeEeccceeEEeeeEEEEeeC---CCCeeE
Q 039106 187 ISADTAAFTGCKFI---------------------------------GSVDFIFGNGLSFYEDCHLHAITN---SYGALT 230 (345)
Q Consensus 187 v~gd~~~f~nC~~~---------------------------------G~VDFIfG~~~a~f~~c~i~~~~~---~~g~It 230 (345)
+++|+++||||+|+ |+||||||+|+++||+|+|+++.. +.|+||
T Consensus 230 v~gDr~~fy~C~f~G~QDTLy~~~~~~~~~~~~d~~gRqyy~~CyIeGtVDFIFG~a~AvFe~C~I~s~~~~~~~~g~IT 309 (422)
T 3grh_A 230 TDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVTNSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVF 309 (422)
T ss_dssp ECCSSEEEEEEEEECSTTCEEECCCCTTCSCCSSCCCEEEEESCEEEESEEEEEESSEEEEESCEEEECCSSCSSCCEEE
T ss_pred ecCCcEEEEeeEEEeecceeeeccccccccccccccccEEEEecEEeccccEEccCceEEEEeeEEEEecCCCCCceEEE
Confidence 99999999988875 899999999999999999999763 369999
Q ss_pred eeccCCCCCcceeEEEccEEee--cccEEeeecccccce----EEEEcccCCccccc-CCCCCCCCC---CC--------
Q 039106 231 AQKRGSLLEETGFSFVKCKVTG--SGALYLGRAWGTFSR----VVFAYTYMDKIITP-RGWYDWGDK---NR-------- 292 (345)
Q Consensus 231 A~~r~~~~~~~G~vf~nc~it~--~g~~yLGRpW~~~sr----vvf~~t~~~~~I~p-~GW~~w~~~---~~-------- 292 (345)
|+.+ ++.+++||||+||+|++ ++++||||||++|+| ||||+|+|+++|+| +||.+|... +.
T Consensus 310 A~~t-~~~~~~Gfvf~nC~ita~~~~~~yLGRPW~~ysrt~~qVVf~~s~l~~~I~p~~GW~~m~~s~r~f~~~~~~~~~ 388 (422)
T 3grh_A 310 APAT-LSNIYYGFLAVNSRFNAFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVDD 388 (422)
T ss_dssp EECC-BTTCCCCEEEESCEEEECSSSCBEEEEEECCSTTBCCEEEEESCEECTTBCSSCCEEEEETTCCCCCCCCCEEET
T ss_pred ecCC-CCCCCCEEEEECCEEEeCCCCCEEcCCCCCCcCCcCccEEEEeCcccCccCCCCCchhhhccCCCcccccccccc
Confidence 9854 78899999999999995 568999999999988 79999999999998 999999432 11
Q ss_pred ----------cceeEEEEecccCCCCCC
Q 039106 293 ----------EMTVFYGQYKCSGPGAYY 310 (345)
Q Consensus 293 ----------~~t~~f~EY~n~GpGa~~ 310 (345)
....+|+||+|+|||+..
T Consensus 389 ~~~~~r~l~~~~~nR~~ey~n~g~g~~~ 416 (422)
T 3grh_A 389 NDEIQRNLNDTNYNRMWEYNNRGVGSKV 416 (422)
T ss_dssp TTEEECCTTCTTSCEEEEESCBSGGGC-
T ss_pred cccccccCCCcchhheeEecccCCCccc
Confidence 136789999999999864
No 6
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.64 E-value=1e-14 Score=144.73 Aligned_cols=182 Identities=16% Similarity=0.231 Sum_probs=133.8
Q ss_pred CCceEEEcCCCCC----C-----CCccHHHHHHhCCCCCcceEEEEEeCceee--------eeEeeccc----CceEEEE
Q 039106 61 PCKTIKVNKNPRL----G-----NFVTVQKAINSLPVINLCRVVIFISAGTYR--------EKVEIPTT----MAYITMI 119 (345)
Q Consensus 61 ~~~~ivV~~d~G~----g-----~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~--------E~v~I~~~----k~~ItL~ 119 (345)
...++.|+++ |+ | .| |||+|++++++++ +|+|++|+|+ |.|.+.++ +| |+|.
T Consensus 13 ~~~~~yVsp~-Gsd~~~G~t~~~P~-tiq~Ai~~a~pGd----tI~l~~GtY~~~~~e~~~~~i~~~~sGt~~~p-Iti~ 85 (400)
T 1ru4_A 13 TKRIYYVAPN-GNSSNNGSSFNAPM-SFSAAMAAVNPGE----LILLKPGTYTIPYTQGKGNTITFNKSGKDGAP-IYVA 85 (400)
T ss_dssp CSCEEEECTT-CCTTCCSSSTTSCB-CHHHHHHHCCTTC----EEEECSEEEECCCBTTBCCCEEECCCCBTTBC-EEEE
T ss_pred CccEEEEcCC-CCCCCCCccccCCc-cHHHHHhhCCCCC----EEEECCCeEccccccccceeEEecCCCCCCCC-EEEE
Confidence 4568999987 54 3 68 9999999999997 9999999999 78888653 44 9999
Q ss_pred ecCCCceEEecCCCcccCCCCCCCCCCcccceeeeecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEE
Q 039106 120 GAGADNTVIEWDDTADRMGQSGRPLGTYASATFAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKF 199 (345)
Q Consensus 120 G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~ 199 (345)
|++.++++|. .... . |... ..+..|.|.++++++++|+|+|+.. + +|++.+++..|+||+|
T Consensus 86 ~~~g~~~vI~-~~~~-~----g~~~--~~~~~i~i~~~~~~i~gl~I~n~g~---------~--GI~v~gs~~~i~n~~i 146 (400)
T 1ru4_A 86 AANCGRAVFD-FSFP-D----SQWV--QASYGFYVTGDYWYFKGVEVTRAGY---------Q--GAYVIGSHNTFENTAF 146 (400)
T ss_dssp EGGGCCEEEE-CCCC-T----TCCC--TTCCSEEECSSCEEEESEEEESCSS---------C--SEEECSSSCEEESCEE
T ss_pred EecCCCCEEe-CCcc-C----Cccc--cceeEEEEECCeEEEEeEEEEeCCC---------C--cEEEeCCCcEEEeEEE
Confidence 9988899998 3211 0 1000 1135689999999999999999862 2 5788899999999999
Q ss_pred eceee---eEeccc-eeEEeeeEEEEeeC------CCCeeEeeccCCCCCcceeEEEccEEeec--ccEEeeecccccce
Q 039106 200 IGSVD---FIFGNG-LSFYEDCHLHAITN------SYGALTAQKRGSLLEETGFSFVKCKVTGS--GALYLGRAWGTFSR 267 (345)
Q Consensus 200 ~G~VD---FIfG~~-~a~f~~c~i~~~~~------~~g~ItA~~r~~~~~~~G~vf~nc~it~~--g~~yLGRpW~~~sr 267 (345)
.+.-| +|.+.. ..++++|+|+...+ ....|.+... ...|.+|.+|++... ...+| |+.++.
T Consensus 147 ~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~----~g~Gn~~~~~~~~~N~ddGidl---~~~~~~ 219 (400)
T 1ru4_A 147 HHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQK----QGPGNRFVGCRAWENSDDGFDL---FDSPQK 219 (400)
T ss_dssp ESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTT----CCSCCEEESCEEESCSSCSEEC---TTCCSC
T ss_pred ECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEec----ccCCeEEECCEEeecCCCcEEE---EecCCC
Confidence 96655 344543 78999999997542 1233444322 248999999999753 34555 456777
Q ss_pred EEEEcccC
Q 039106 268 VVFAYTYM 275 (345)
Q Consensus 268 vvf~~t~~ 275 (345)
|+|.+|..
T Consensus 220 v~i~nn~a 227 (400)
T 1ru4_A 220 VVIENSWA 227 (400)
T ss_dssp CEEESCEE
T ss_pred EEEEeEEE
Confidence 88888753
No 7
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.22 E-value=2.2e-10 Score=116.63 Aligned_cols=157 Identities=16% Similarity=0.164 Sum_probs=106.8
Q ss_pred eEEEcCCCCCCCCccHHHHHHhCCCCCcceEEEEEeCceeee-eEeec----ccCceEEEEecCCCceEEecCCCcccCC
Q 039106 64 TIKVNKNPRLGNFVTVQKAINSLPVINLCRVVIFISAGTYRE-KVEIP----TTMAYITMIGAGADNTVIEWDDTADRMG 138 (345)
Q Consensus 64 ~ivV~~d~G~g~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E-~v~I~----~~k~~ItL~G~g~~~tiI~~~~~~~~~~ 138 (345)
++.|+. +.+||+||++|++|+ +|+|++|+|+| .|.|. .++| |||.|++..+++|.+.
T Consensus 25 ~i~V~~------~~~Lq~Ai~~A~pGD----tI~L~~GtY~~~~i~i~~sGt~~~p-Itl~~~~~~~~vi~G~------- 86 (506)
T 1dbg_A 25 GQVVAS------NETLYQVVKEVKPGG----LVQIADGTYKDVQLIVSNSGKSGLP-ITIKALNPGKVFFTGD------- 86 (506)
T ss_dssp -CEECS------HHHHHHHHHHCCTTC----EEEECSEEEETCEEEECCCCBTTBC-EEEEESSTTSEEEEES-------
T ss_pred EEEeCC------HHHHHHHHHhCCCCC----EEEECCCEEecceEEEecCCcCCCC-EEEECCCCCccEEeCC-------
Confidence 356763 479999999999998 99999999998 78883 2455 9999987667888643
Q ss_pred CCCCCCCCcccceeeeecCceEEEeeeeecCCCCCCCCC-CCCceEEEEEeCCeeEEEceEEeceee----eE-------
Q 039106 139 QSGRPLGTYASATFAVNSPYFIAKNITFKNKAPLPPSGA-LGKQAVAFRISADTAAFTGCKFIGSVD----FI------- 206 (345)
Q Consensus 139 ~~G~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~~~~g~-~~~QAvAl~v~gd~~~f~nC~~~G~VD----FI------- 206 (345)
.+|.|.++++++++|+|+|.......-. .+. .++.+.|+++.+.||+|.+.-+ +|
T Consensus 87 -----------~~l~i~g~~v~i~GL~i~~~~~~~~~~~~~~~--~~iav~G~~~~I~nn~I~~~~~gd~i~i~~~~~~~ 153 (506)
T 1dbg_A 87 -----------AKVELRGEHLILEGIWFKDGNRAIQAWKSHGP--GLVAIYGSYNRITACVFDCFDEANSAYITTSLTED 153 (506)
T ss_dssp -----------CEEEECSSSEEEESCEEEEECCCTTTCCTTSC--CSEEECSSSCEEESCEEESCCSSCSCSEEECCCTT
T ss_pred -----------ceEEEEcCCEEEECeEEECCCcceeeeecccc--cceEEecCCeEEEeeEEEcCCCCceeeEeecccce
Confidence 3788999999999999999874211000 111 2445569999999999995422 22
Q ss_pred --eccceeEEeeeEEEEeeCCCC------eeEeeccC-CCCCcceeEEEccEEee
Q 039106 207 --FGNGLSFYEDCHLHAITNSYG------ALTAQKRG-SLLEETGFSFVKCKVTG 252 (345)
Q Consensus 207 --fG~~~a~f~~c~i~~~~~~~g------~ItA~~r~-~~~~~~G~vf~nc~it~ 252 (345)
+| ....+++|.|....+.+- .|...+.. ...+..+-++.+|.|..
T Consensus 154 ~l~g-~~n~I~~N~I~Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~ 207 (506)
T 1dbg_A 154 GKVP-QHCRIDHCSFTDKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSN 207 (506)
T ss_dssp CCCC-CSCEEESCEEECCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEE
T ss_pred eeec-cccEEECcEEECCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcc
Confidence 33 345799999986432111 22222110 00234677899998876
No 8
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.35 E-value=1.7e-06 Score=85.40 Aligned_cols=118 Identities=18% Similarity=0.265 Sum_probs=69.0
Q ss_pred EEEEeCceee--eeEeecccCceEEEEecCCCceE---EecCCCccc---CCCCCCCC--C--Ccccceeeeec------
Q 039106 95 VIFISAGTYR--EKVEIPTTMAYITMIGAGADNTV---IEWDDTADR---MGQSGRPL--G--TYASATFAVNS------ 156 (345)
Q Consensus 95 ~I~I~~G~Y~--E~v~I~~~k~~ItL~G~g~~~ti---I~~~~~~~~---~~~~G~~~--g--t~~sATv~V~a------ 156 (345)
+|+|.||+|+ ++|.| +||+|||.|++. .++ |.++-.... ..+.|..+ . -...++|.|++
T Consensus 59 vI~L~~G~Y~l~g~ivI--dkp~LtL~G~~~-g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~ 135 (410)
T 2inu_A 59 AIIIPPGDYDLHTQVVV--DVSYLTIAGFGH-GFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRL 135 (410)
T ss_dssp EEECCSEEEEECSCEEE--CCTTEEEECSCC-CCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCE
T ss_pred EEEECCCeeccCCcEEE--ecCcEEEEecCC-CcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCccc
Confidence 9999999996 89999 689999999874 333 664321110 00111100 0 01446677777
Q ss_pred C-----ceEEEeeeeecCCCCCCCCCCCCceEEEEEe--CCeeEEEceEEec--eeeeEeccceeEEeeeEEE
Q 039106 157 P-----YFIAKNITFKNKAPLPPSGALGKQAVAFRIS--ADTAAFTGCKFIG--SVDFIFGNGLSFYEDCHLH 220 (345)
Q Consensus 157 ~-----~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~--gd~~~f~nC~~~G--~VDFIfG~~~a~f~~c~i~ 220 (345)
+ +|++++++|+|+... ...+-.++++. +|+..+.+|+|.+ .-=.+-+.-...++++.|.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s-----~~~~dAGI~v~~~~d~~~I~nn~i~~~~fGI~l~~a~~~~I~~N~I~ 203 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNS-----YHNGKTGIEVASDNDSFHITGMGFVYLEHALIVRGADALRVNDNMIA 203 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTS-----CCCSCEEEEECSCEESCEEESCEEESCSEEEEETTEESCEEESCEEE
T ss_pred CCcEECCEEEECCEeecCCCC-----cccCceeEEEeccCCeEEEECCEEecccEEEEEccCCCcEEECCEEE
Confidence 4 555555555554532 23456788887 7888999999982 1112233334445555554
No 9
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=97.71 E-value=0.00043 Score=66.73 Aligned_cols=52 Identities=25% Similarity=0.355 Sum_probs=40.5
Q ss_pred CCccHHHHHHhCCCCCcceEEEEEeCceeee---------eEeecccCceEEEEecCCCceEEecC
Q 039106 75 NFVTVQKAINSLPVINLCRVVIFISAGTYRE---------KVEIPTTMAYITMIGAGADNTVIEWD 131 (345)
Q Consensus 75 ~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E---------~v~I~~~k~~ItL~G~g~~~tiI~~~ 131 (345)
|-..||+||+++.+. ..-+|+|.||+|.. .|.+ +++|+|+|+++..++|...
T Consensus 18 dt~aiq~Ai~~a~~~--gg~~v~~p~G~y~~~~~~~~~~g~l~~---~~~v~l~g~g~~~t~l~~~ 78 (377)
T 2pyg_A 18 DRASIQAAIDAAYAA--GGGTVYLPAGEYRVSAAGEPGDGCLML---KDGVYLAGAGMGETVIKLI 78 (377)
T ss_dssp CHHHHHHHHHHHHHT--TSEEEEECSEEEEECCCSSGGGCSEEC---CTTEEEEESSBTTEEEEEC
T ss_pred hHHHHHHHHHHHHhc--CCCEEEECCeEEEEcccccCCcccEEe---cCCeEEEEcCCCCcEEEec
Confidence 457899999998642 13499999999996 5777 3479999999877887654
No 10
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.46 E-value=0.0015 Score=63.46 Aligned_cols=147 Identities=10% Similarity=0.042 Sum_probs=93.0
Q ss_pred ccHHHHHHhCCCCCcceEEEEEeCceee--eeEeecccCceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeee
Q 039106 77 VTVQKAINSLPVINLCRVVIFISAGTYR--EKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAV 154 (345)
Q Consensus 77 ~TIq~AI~aap~~~~~r~~I~I~~G~Y~--E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V 154 (345)
-|+++||.+.. .+.+|+...|+++ +.|.|. +++||.|.+. ...|.+.. +.+.+
T Consensus 56 GsLr~av~~~~----P~~Ivf~~~g~I~l~~~l~V~---sn~TI~G~ga-~~~i~G~G-----------------~gi~i 110 (346)
T 1pxz_A 56 GTLRYGATREK----ALWIIFSQNMNIKLKMPLYVA---GHKTIDGRGA-DVHLGNGG-----------------PCLFM 110 (346)
T ss_dssp TSHHHHHHCSS----CEEEEESSCEEECCSSCEECC---SSEEEECTTS-CEEEETTS-----------------CCEEE
T ss_pred chhHHHhccCC----CeEEEEcCCcEEecCccEEec---CCeEEEccCC-ceEEeCCc-----------------ceEEE
Confidence 48999998733 2457777788996 678773 4799999875 35565421 12223
Q ss_pred -ecCceEEEeeeeecCCCCCCC----------CC-CCCceEEEEEe-CCeeEEEceEEe----ceeeeEeccceeEEeee
Q 039106 155 -NSPYFIAKNITFKNKAPLPPS----------GA-LGKQAVAFRIS-ADTAAFTGCKFI----GSVDFIFGNGLSFYEDC 217 (345)
Q Consensus 155 -~a~~f~a~nitf~Nt~~~~~~----------g~-~~~QAvAl~v~-gd~~~f~nC~~~----G~VDFIfG~~~a~f~~c 217 (345)
.+++++++||+|++..+.... |. .....-||.+. +.+..+.+|.|. |-+|+..+.-...+++|
T Consensus 111 ~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~~s~~vTISnn 190 (346)
T 1pxz_A 111 RKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTLGSTGITISNN 190 (346)
T ss_dssp ESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEEEEEESSCEEEEEESC
T ss_pred EccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCcEeeccCcceEEEEee
Confidence 578999999999987532100 00 00112244554 567779999999 77887778888889999
Q ss_pred EEEEeeCCCCeeEeeccCC-CCCcceeEEEccEE
Q 039106 218 HLHAITNSYGALTAQKRGS-LLEETGFSFVKCKV 250 (345)
Q Consensus 218 ~i~~~~~~~g~ItA~~r~~-~~~~~G~vf~nc~i 250 (345)
.|.... .+++.-.+... ......+.|+++.+
T Consensus 191 ~f~~H~--k~~l~G~sd~~~~d~~~~vT~~~N~f 222 (346)
T 1pxz_A 191 HFFNHH--KVMLLGHDDTYDDDKSMKVTVAFNQF 222 (346)
T ss_dssp EEESEE--EEEEESCCSSCGGGGGCEEEEESCEE
T ss_pred EEecCC--ceeEECCCCccccCCceEEEEEeeEE
Confidence 998532 24333221110 01234678888888
No 11
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=97.21 E-value=0.01 Score=57.77 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=32.6
Q ss_pred eEEEcCCCCCC-CCccHHHHHHhCCCCCcceEEEEEeC--ceee-eeEeecccCceEEEEecC
Q 039106 64 TIKVNKNPRLG-NFVTVQKAINSLPVINLCRVVIFISA--GTYR-EKVEIPTTMAYITMIGAG 122 (345)
Q Consensus 64 ~ivV~~d~G~g-~f~TIq~AI~aap~~~~~r~~I~I~~--G~Y~-E~v~I~~~k~~ItL~G~g 122 (345)
+..|... |.. +=..||+||++++.+. .++++.| |+|. ..|.++ .+++|..++
T Consensus 14 ~~~v~~~-G~~~dT~aiq~Ai~ac~~Gg---~v~~~~~~~g~yl~g~i~l~---s~vtL~l~~ 69 (376)
T 1bhe_A 14 SCTTLKA-DSSTATSTIQKALNNCDQGK---AVRLSAGSTSVFLSGPLSLP---SGVSLLIDK 69 (376)
T ss_dssp EEEEEEC-CSSBCHHHHHHHHTTCCTTC---EEEEECSSSSEEEESCEECC---TTCEEEECT
T ss_pred eEEECCC-CCCccHHHHHHHHHHhccCC---cEEEECCCCceEEEeEEEEC---CCCEEEECC
Confidence 4555554 432 3356999999998754 2333333 8995 677774 357777765
No 12
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=96.91 E-value=0.029 Score=54.12 Aligned_cols=28 Identities=14% Similarity=0.160 Sum_probs=19.9
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceeee
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYRE 105 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E 105 (345)
...||+|++++... ..-+|+|.+|+|-.
T Consensus 8 t~aiq~ai~~c~~~--gg~~v~vP~G~~l~ 35 (349)
T 1hg8_A 8 YSGLATAVSSCKNI--VLNGFQVPTGKQLD 35 (349)
T ss_dssp GGGHHHHHHHCSEE--EECCCEECTTCCEE
T ss_pred HHHHHHHHHhcccc--CCCEEEECCCEEEE
Confidence 46799999988751 12278888888863
No 13
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=96.86 E-value=0.04 Score=58.21 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=41.7
Q ss_pred CccHHHHHHhCCCC-------CcceEEEEEeCceee--eeEeecccCceEEEEecCCCceEEecCCC
Q 039106 76 FVTVQKAINSLPVI-------NLCRVVIFISAGTYR--EKVEIPTTMAYITMIGAGADNTVIEWDDT 133 (345)
Q Consensus 76 f~TIq~AI~aap~~-------~~~r~~I~I~~G~Y~--E~v~I~~~k~~ItL~G~g~~~tiI~~~~~ 133 (345)
=.-||+||+++... ..++.+|+|.+|+|. ..|.++ .++.|+|++.+.++|.....
T Consensus 66 T~Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~---~~t~L~G~~~~~pvIka~~~ 129 (758)
T 3eqn_A 66 TAAIQAAINAGGRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL---YQTQLIGDAKNLPTLLAAPN 129 (758)
T ss_dssp HHHHHHHHHTTSCSCTTCCCCSSSCEEEEECSSEEEESSCEECC---TTEEEEECSSSCCEEEECTT
T ss_pred HHHHHHHHHHhhhcccccccccccceEEEECCceEEEcccEEcc---CCeEEEecCCCCCeEecCCC
Confidence 35799999987542 134579999999997 568874 47999999988788865443
No 14
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.85 E-value=0.016 Score=55.69 Aligned_cols=143 Identities=13% Similarity=0.171 Sum_probs=87.8
Q ss_pred cHHHHHHh---CCCCCcceEEEEEeCceee------eeEeecc------cCceEEEEecCCCceEEecCCCcccCCCCCC
Q 039106 78 TVQKAINS---LPVINLCRVVIFISAGTYR------EKVEIPT------TMAYITMIGAGADNTVIEWDDTADRMGQSGR 142 (345)
Q Consensus 78 TIq~AI~a---ap~~~~~r~~I~I~~G~Y~------E~v~I~~------~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~ 142 (345)
-+++||.+ .. ..+++.+|.| .|+-. +.|.|.. ..+++||+|.|.. ..|.+.
T Consensus 30 dL~~Al~~~~~~~-~~~~p~iI~V-~G~I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~-~~i~G~----------- 95 (326)
T 3vmv_A 30 QIQQLIDNRSRSN-NPDEPLTIYV-NGTITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTN-GEFDGI----------- 95 (326)
T ss_dssp HHHHHHHHHHHSS-CTTSCEEEEE-CSEEESTTCSSSSEEESCTTCTTSCEEEEEEEECTTC-CEEESC-----------
T ss_pred HHHHHHhhccccc-CCCCCEEEEE-eeEEecCCCCCceEEEecccccccCCCCeEEEecCCC-eEEeCc-----------
Confidence 48888873 11 1234556664 46654 5677731 1268999998753 334321
Q ss_pred CCCCcccceeee-ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEe--CCeeEEEceEEe-------------ceeeeE
Q 039106 143 PLGTYASATFAV-NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRIS--ADTAAFTGCKFI-------------GSVDFI 206 (345)
Q Consensus 143 ~~gt~~sATv~V-~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~--gd~~~f~nC~~~-------------G~VDFI 206 (345)
.|.+ .+++++++||.|++.... +.. ||.+. +++..+.+|.|. |.+|..
T Consensus 96 --------gl~i~~a~NVIIrNl~i~~~~~~------~~D--aI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~ 159 (326)
T 3vmv_A 96 --------GIRLSNAHNIIIQNVSIHHVREG------EGT--AIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMK 159 (326)
T ss_dssp --------CEEEESEEEEEEESCEEECCCST------TSC--SEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEEC
T ss_pred --------EEEEEecceEEEECeEEEcCCCC------CCC--eEEEecCCCcEEEEeeEEeccccCCcCccccCcceEec
Confidence 2444 678999999999987521 224 45555 478999999994 667777
Q ss_pred eccceeEEeeeEEEEeeCCCCeeEeeccCCCCCcceeEEEccEEee
Q 039106 207 FGNGLSFYEDCHLHAITNSYGALTAQKRGSLLEETGFSFVKCKVTG 252 (345)
Q Consensus 207 fG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~~~~G~vf~nc~it~ 252 (345)
-|.-..-+++|.|+... .+++.=.+.....+.....|+++.+..
T Consensus 160 ~~s~~VTISnn~f~~h~--k~~LiG~sd~~~~~~~~vT~~~N~f~~ 203 (326)
T 3vmv_A 160 RNAEYITVSWNKFENHW--KTMLVGHTDNASLAPDKITYHHNYFNN 203 (326)
T ss_dssp TTCEEEEEESCEEEEEE--ECEEECSSSCGGGCCEEEEEESCEEEE
T ss_pred CCCceEEEEceEEecCc--eEEEECCCCCCcccCccEEEEeeEecC
Confidence 67777889999997532 244432221111112356777777753
No 15
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.80 E-value=0.015 Score=55.76 Aligned_cols=59 Identities=17% Similarity=0.135 Sum_probs=35.5
Q ss_pred eeee-ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEece---------eee--EeccceeEEeeeE
Q 039106 151 TFAV-NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFIGS---------VDF--IFGNGLSFYEDCH 218 (345)
Q Consensus 151 Tv~V-~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~G~---------VDF--IfG~~~a~f~~c~ 218 (345)
.|.+ ..+++.+++|+|+|+.. ..+-+. .+...+.+|.|... .|= +...-..++++|.
T Consensus 102 ~i~~~~~~nv~i~~i~i~nsp~---------~~i~i~--~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~ 170 (336)
T 1nhc_A 102 FMYIHDVEDSTFKGINIKNTPV---------QAISVQ--ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGAT 170 (336)
T ss_dssp CEEEEEEEEEEEESCEEECCSS---------CCEEEE--EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCE
T ss_pred EEEEeeeCcEEEEEEEEEeCCc---------cEEEEE--eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCE
Confidence 3454 57789999999999852 223333 66677777777632 221 2233455666666
Q ss_pred EE
Q 039106 219 LH 220 (345)
Q Consensus 219 i~ 220 (345)
|.
T Consensus 171 i~ 172 (336)
T 1nhc_A 171 VK 172 (336)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 16
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.74 E-value=0.026 Score=54.81 Aligned_cols=119 Identities=16% Similarity=0.151 Sum_probs=76.1
Q ss_pred CccHHHHHHhCCC--------CCcceEEEEEeCcee------------------eeeEeecccCceEEEEecCCCceEEe
Q 039106 76 FVTVQKAINSLPV--------INLCRVVIFISAGTY------------------REKVEIPTTMAYITMIGAGADNTVIE 129 (345)
Q Consensus 76 f~TIq~AI~aap~--------~~~~r~~I~I~~G~Y------------------~E~v~I~~~k~~ItL~G~g~~~tiI~ 129 (345)
..++++||+++.. ...++.+|.| .|+- ...|.|....+++||+|.+.. +.
T Consensus 26 ~~~L~~al~~~~~~~~g~~~~~~~~p~vi~v-~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~~sn~TI~G~~~~---~~ 101 (353)
T 1air_A 26 MQDIVNIIDAARLDANGKKVKGGAYPLVITY-TGNEDSLINAAAANICGQWSKDPRGVEIKEFTKGITIIGANGS---SA 101 (353)
T ss_dssp HHHHHHHHHHTTBCTTSCBCTBCSSCEEEEE-CCCCHHHHHHHHTSGGGSTTSCCCEEEEESBCSCEEEEECTTC---CB
T ss_pred HHHHHHHHHhhccccccccccCCCceEEEEE-ccEEeccccccccccccccccCCCceEEEecCCCEEEEeccCC---CC
Confidence 3689999988752 2345667777 5552 145666433457777775321 10
Q ss_pred cCCCcccCCCCCCCCCCcccceeee-ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEe--------
Q 039106 130 WDDTADRMGQSGRPLGTYASATFAV-NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFI-------- 200 (345)
Q Consensus 130 ~~~~~~~~~~~G~~~gt~~sATv~V-~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~-------- 200 (345)
| ..|.+ .+++++++||+|++... +..+.-|+-+. .+++..+.+|.|.
T Consensus 102 -----------g--------~gl~i~~~~NVIIrnl~i~~~~~----~~~~~DaI~i~-~s~nVWIDH~s~s~~~~~~~g 157 (353)
T 1air_A 102 -----------N--------FGIWIKKSSDVVVQNMRIGYLPG----GAKDGDMIRVD-DSPNVWVDHNELFAANHECDG 157 (353)
T ss_dssp -----------S--------SEEEEESCCSEEEESCEEESCSC----GGGTCCSEEEE-SCCSEEEESCEEECCSCCCTT
T ss_pred -----------C--------ceEEEeccCcEEEeccEEEeCCC----CCCCCCeEEee-CCCcEEEEeeEEecCCccccc
Confidence 1 12444 56899999999996431 11122344443 5688999999995
Q ss_pred ---------ceeeeEeccceeEEeeeEEEEe
Q 039106 201 ---------GSVDFIFGNGLSFYEDCHLHAI 222 (345)
Q Consensus 201 ---------G~VDFIfG~~~a~f~~c~i~~~ 222 (345)
|.+|+.-|.....+++|.|.-.
T Consensus 158 ~~~~~~~~DGl~di~~~s~~VTISnn~f~~h 188 (353)
T 1air_A 158 TPDNDTTFESAVDIKGASNTVTVSYNYIHGV 188 (353)
T ss_dssp CGGGCCSSCCSEEEESSCCEEEEESCEEEEE
T ss_pred ccccccccccceeeecccCcEEEEeeEEcCC
Confidence 4568877888888999999853
No 17
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=96.69 E-value=0.023 Score=54.57 Aligned_cols=28 Identities=25% Similarity=0.128 Sum_probs=20.2
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceeee
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYRE 105 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E 105 (345)
...||+||+++... ..-+|+|.+|+|..
T Consensus 8 t~aiq~ai~~c~~~--~g~~v~vP~G~~~~ 35 (339)
T 2iq7_A 8 AAAAIKGKASCTSI--ILNGIVVPAGTTLD 35 (339)
T ss_dssp HHHHHHHGGGCSEE--EEESCEECTTCCEE
T ss_pred HHHHHHHHHHhhcc--CCCeEEECCCEEEE
Confidence 45799999988751 12478889998863
No 18
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.65 E-value=0.016 Score=56.03 Aligned_cols=141 Identities=12% Similarity=0.110 Sum_probs=87.1
Q ss_pred HHHHHHhCCCCCcceEEEEEeCceee----eeEeecccCceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeee
Q 039106 79 VQKAINSLPVINLCRVVIFISAGTYR----EKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAV 154 (345)
Q Consensus 79 Iq~AI~aap~~~~~r~~I~I~~G~Y~----E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V 154 (345)
+.+||.+ ++|.+|.| .|+.. +.|.| ++|+||.|.+.. .|.+. -|.+
T Consensus 38 Lr~al~~-----~~PriIvv-~G~I~~~~~~~l~v---~snkTI~G~ga~--~I~G~-------------------Gi~I 87 (340)
T 3zsc_A 38 LEKYTTA-----EGKYVIVV-DGTIVFEPKREIKV---LSDKTIVGINDA--KIVGG-------------------GLVI 87 (340)
T ss_dssp HHHHHTS-----SSCEEEEE-EEEEEEEEEEEEEE---CSSEEEEEEEEE--EEEEE-------------------EEEE
T ss_pred HHHHHhC-----CCCEEEEE-CcEEEeCCcceEEe---cCCCEEEeccCc--EEecC-------------------ceEE
Confidence 6666643 23456655 58876 45777 467999999865 55432 1334
Q ss_pred -ecCceEEEeeeeecCCCCCCC--CCCCCceEEEEEeCCeeEEEceEEe----ceeeeEeccceeEEeeeEEEEeeCCCC
Q 039106 155 -NSPYFIAKNITFKNKAPLPPS--GALGKQAVAFRISADTAAFTGCKFI----GSVDFIFGNGLSFYEDCHLHAITNSYG 227 (345)
Q Consensus 155 -~a~~f~a~nitf~Nt~~~~~~--g~~~~QAvAl~v~gd~~~f~nC~~~----G~VDFIfG~~~a~f~~c~i~~~~~~~g 227 (345)
.+++++++||.|++....... ...+..|+-+. .+.+..+.+|.|. |.+|+.-|.-...+++|.|.-. ..+
T Consensus 88 ~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~-~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h--~k~ 164 (340)
T 3zsc_A 88 KDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE-NSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDH--DKV 164 (340)
T ss_dssp ESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE-SCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESC--SBC
T ss_pred EcCceEEEeCeEEECCccccCccCCcCCCCeEEEe-cCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccC--cee
Confidence 478999999999987532110 11133455543 3678899999999 8899877777888999999742 123
Q ss_pred eeEeeccCCC-CC---cceeEEEccEEee
Q 039106 228 ALTAQKRGSL-LE---ETGFSFVKCKVTG 252 (345)
Q Consensus 228 ~ItA~~r~~~-~~---~~G~vf~nc~it~ 252 (345)
++.=.+.... .+ .....|+++.+..
T Consensus 165 ~LiG~sd~~~~~~d~g~~~vT~hhN~f~~ 193 (340)
T 3zsc_A 165 SLVGSSDKEDPEQAGQAYKVTYHHNYFKN 193 (340)
T ss_dssp CEECCCTTSCHHHHHHSCEEEEESCEEES
T ss_pred eEeCcCCCCccccccCCcEEEEECeEecC
Confidence 3332111000 01 1356777777753
No 19
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=96.53 E-value=0.099 Score=50.70 Aligned_cols=121 Identities=13% Similarity=0.167 Sum_probs=69.1
Q ss_pred eEeecccCceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeee-ecCceEEEeeeeecCCCC-C----CCCCCC
Q 039106 106 KVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAV-NSPYFIAKNITFKNKAPL-P----PSGALG 179 (345)
Q Consensus 106 ~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V-~a~~f~a~nitf~Nt~~~-~----~~g~~~ 179 (345)
+|.| .+++||+|.|.+ ..|.+. .|.+ .+++++++||+|++.... + ..| -+
T Consensus 75 ~l~v---~sn~TI~G~G~~-~~i~g~-------------------gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g-~~ 130 (355)
T 1pcl_A 75 QISI---PSNTTIIGVGSN-GKFTNG-------------------SLVIKGVKNVILRNLYIETPVDVAPHYESGDG-WN 130 (355)
T ss_pred eEEe---CCCeEEEEecCC-eEEecC-------------------EEEEecCCeEEEeeeEEEcCcccccccccccC-cc
Confidence 4555 357999998753 444431 2444 578999999999986421 1 001 00
Q ss_pred CceEEEEE-eCCeeEEEceEEe---------------------ceeeeEeccceeEEeeeEEEEeeCCCCeeEeeccCCC
Q 039106 180 KQAVAFRI-SADTAAFTGCKFI---------------------GSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSL 237 (345)
Q Consensus 180 ~QAvAl~v-~gd~~~f~nC~~~---------------------G~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~ 237 (345)
...-||.+ .+.+..+.+|.|. |.+|+.-|.-...+.+|.|.... ++++.=.+-...
T Consensus 131 ~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~--k~~LiG~sd~~~ 208 (355)
T 1pcl_A 131 AEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHD--KTILIGHSDSNG 208 (355)
T ss_pred ccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCC--ceEEeCCCCCCc
Confidence 12234555 4567888888886 34555556666778889887532 344442221111
Q ss_pred CC---cceeEEEccEEee
Q 039106 238 LE---ETGFSFVKCKVTG 252 (345)
Q Consensus 238 ~~---~~G~vf~nc~it~ 252 (345)
.+ .....|++|.|..
T Consensus 209 ~~d~g~~~vT~hhN~f~~ 226 (355)
T 1pcl_A 209 SQDSGKLRVTFHNNVFDR 226 (355)
T ss_pred ccccCcceEEEECcEEeC
Confidence 01 2347788887754
No 20
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=96.41 E-value=0.12 Score=52.01 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=104.4
Q ss_pred CCccHHHHHHhCCCCCcceEEEEEeCceee-eeEeecccCceEEEEecCCCceEEecCCC----------------ccc-
Q 039106 75 NFVTVQKAINSLPVINLCRVVIFISAGTYR-EKVEIPTTMAYITMIGAGADNTVIEWDDT----------------ADR- 136 (345)
Q Consensus 75 ~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~-E~v~I~~~k~~ItL~G~g~~~tiI~~~~~----------------~~~- 136 (345)
+=.-||+||+++.... ..-+|+|.+|+|. ..|.+ +.+++|..+. .++|.+... ...
T Consensus 38 dT~Aiq~Aidac~~~~-ggg~V~vP~GtYl~g~I~l---ks~v~L~l~~--GatL~~s~~td~~~y~~~~~~~~~~~~nI 111 (464)
T 1h80_A 38 DSNALQRAINAISRKP-NGGTLLIPNGTYHFLGIQM---KSNVHIRVES--DVIIKPTWNGDGKNHRLFEVGVNNIVRNF 111 (464)
T ss_dssp CHHHHHHHHHHHHTST-TCEEEEECSSEEEECSEEC---CTTEEEEECT--TCEEEECCCTTCSCEEEEEESSSSCEEEE
T ss_pred hHHHHHHHHHHHhhcc-CCcEEEECCCeEEEeeEec---cCceEEEEcC--CcEEEeccCCCcccCCceEeecccCccce
Confidence 4567999999874310 1248999999994 44555 2356666552 122222210 000
Q ss_pred --CCC------CCCCCCCcccceeee-ecCceEEEeeeeecCCCCCCCCCCCCceE------EEEEeCCeeEEEceEEec
Q 039106 137 --MGQ------SGRPLGTYASATFAV-NSPYFIAKNITFKNKAPLPPSGALGKQAV------AFRISADTAAFTGCKFIG 201 (345)
Q Consensus 137 --~~~------~G~~~gt~~sATv~V-~a~~f~a~nitf~Nt~~~~~~g~~~~QAv------Al~v~gd~~~f~nC~~~G 201 (345)
.+. +|+..+..+-..|.+ ...++.++||+|+|..... ....+ .+.+......+.||.|..
T Consensus 112 tI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih-----~s~~V~i~NtDGi~i~s~nV~I~n~~I~~ 186 (464)
T 1h80_A 112 SFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIF-----ASILVDVTERNGRLHWSRNGIIERIKQNN 186 (464)
T ss_dssp EEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBS-----CSEEECEEEETTEEEEEEEEEEEEEEEES
T ss_pred EEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEe-----eceeeeeecCCCceeeccCEEEeceEEec
Confidence 000 010000001112333 4678999999999955311 11111 013356677889999983
Q ss_pred eeee-----EeccceeEEeeeEEEEeeCCCCeeEeec-----cCCCCCcceeEEEccEEeecc-cEEeeeccc-ccceEE
Q 039106 202 SVDF-----IFGNGLSFYEDCHLHAITNSYGALTAQK-----RGSLLEETGFSFVKCKVTGSG-ALYLGRAWG-TFSRVV 269 (345)
Q Consensus 202 ~VDF-----IfG~~~a~f~~c~i~~~~~~~g~ItA~~-----r~~~~~~~G~vf~nc~it~~g-~~yLGRpW~-~~srvv 269 (345)
.-|= +.+.-...+++|.+.. . .|.-...+ +.....-..+.|.||++.... ...++ |+. ..+.+.
T Consensus 187 gddgiGs~~~~~~~NV~V~n~~~~g-g--~GIrIktg~d~IG~~~~g~v~NI~~~Ni~~~nv~~~I~I~-p~~~~isnIt 262 (464)
T 1h80_A 187 ALFGYGLIQTYGADNILFRNLHSEG-G--IALRMETDNLLMKNYKQGGIRNIFADNIRCSKGLAAVMFG-PHFMKNGDVQ 262 (464)
T ss_dssp CCTTCEEEEESEEEEEEEEEEEEES-S--EEEEEECCCHHHHHHTCCEEEEEEEEEEEEESSSEEEEEE-CTTCBCCCEE
T ss_pred CCCeEEecccCCEeEEEEEeeEEEC-C--CEEEEEeCCceeccCCCCcEEEEEEEeEEEECCceeEEEe-CCCceEeEEE
Confidence 3222 2233567899999764 1 11111111 111223456789999998753 46666 554 335677
Q ss_pred EEcccCCc----ccccCCCCCCCC
Q 039106 270 FAYTYMDK----IITPRGWYDWGD 289 (345)
Q Consensus 270 f~~t~~~~----~I~p~GW~~w~~ 289 (345)
|.|-.+.. +...+||.+..+
T Consensus 263 feNI~~t~~~~aI~i~q~y~~~fd 286 (464)
T 1h80_A 263 VTNVSSVSCGSAVRSDSGFVELFS 286 (464)
T ss_dssp EEEEEEESSSCSEEECCCCCEECC
T ss_pred EEEEEEEccceeEEEecCcccccC
Confidence 76655444 334567776643
No 21
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=96.38 E-value=0.037 Score=53.18 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=26.3
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceeeeeE-eecccCceEEEEecC
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYREKV-EIPTTMAYITMIGAG 122 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E~v-~I~~~k~~ItL~G~g 122 (345)
+..||+|++++... ..-+|+|.+|+|.. | .+ +.+++|..+|
T Consensus 12 ~~aiq~ai~~c~~~--gg~~v~vP~G~~l~-l~~l---~~~~~l~~~g 53 (339)
T 1ia5_A 12 ASSASKSKTSCSTI--VLSNVAVPSGTTLD-LTKL---NDGTHVIFSG 53 (339)
T ss_dssp HHHHHHHGGGCSEE--EEESCEECTTCCEE-ECSC---CTTCEEEEES
T ss_pred hHHHHHHHHHhhcc--CCCeEEECCCEEEE-eecc---CCCeEEEEeC
Confidence 56799999998752 22478899999863 3 33 2235555543
No 22
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=96.33 E-value=0.041 Score=53.53 Aligned_cols=66 Identities=12% Similarity=0.088 Sum_probs=44.0
Q ss_pred eeee--ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEec----eeeeEe-ccceeEEeeeEEE
Q 039106 151 TFAV--NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFIG----SVDFIF-GNGLSFYEDCHLH 220 (345)
Q Consensus 151 Tv~V--~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~G----~VDFIf-G~~~a~f~~c~i~ 220 (345)
.|.| .+++++++||+|++..+... .+..|+-+. .+++..+.+|.|.- ..|-+. +.-...+++|.|.
T Consensus 125 gl~i~~~a~NVIIrnl~i~~~~~~~~---~~~DaI~i~-~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~ 197 (359)
T 1qcx_A 125 GLRVVSGAKNVIIQNIAVTDINPKYV---WGGDAITVD-DSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLID 197 (359)
T ss_dssp CEEEETTCCCEEEESCEEEEECTTEE---TSCCSEEEE-SCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEE
T ss_pred eEEEecCCCCEEEeCcEEEecCCccc---ccCceeEec-CCceEEEEeeEeeccCcCceeecccccccEEEECcEec
Confidence 4777 67999999999998753211 122455554 56778999999982 222112 4456778889886
No 23
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=96.30 E-value=0.061 Score=53.23 Aligned_cols=42 Identities=14% Similarity=0.141 Sum_probs=30.0
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceeee--eEeecccCceEEEEecC
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYRE--KVEIPTTMAYITMIGAG 122 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E--~v~I~~~k~~ItL~G~g 122 (345)
=.-||+||+++..+. +|+|.+|+|.- .|.+.. ..+++|..+|
T Consensus 37 T~Aiq~Ai~ac~~g~----~V~vP~G~Yli~~~l~l~g-~s~v~l~l~G 80 (422)
T 1rmg_A 37 GPAITSAWAACKSGG----LVYIPSGNYALNTWVTLTG-GSATAIQLDG 80 (422)
T ss_dssp HHHHHHHHHHHTBTC----EEEECSSEEEECSCEEEES-CEEEEEEECS
T ss_pred HHHHHHHHHHCCCCC----EEEECCCeEEeCCceeecC-CCeEEEEEcC
Confidence 457999999887543 89999999974 366642 2457776654
No 24
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.21 E-value=0.033 Score=54.21 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=52.0
Q ss_pred ceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeee--ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCe
Q 039106 114 AYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAV--NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADT 191 (345)
Q Consensus 114 ~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V--~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~ 191 (345)
+|+||+|.|.. ..|.+. -|.| .+++++++||+|++..+... .+..|+-+. .+++
T Consensus 108 snkTI~G~G~~-~~i~G~-------------------gl~i~~~a~NVIIrnL~i~~~~~~~~---~g~DaI~i~-~s~n 163 (359)
T 1idk_A 108 SNKSLIGEGSS-GAIKGK-------------------GLRIVSGAENIIIQNIAVTDINPKYV---WGGDAITLD-DCDL 163 (359)
T ss_dssp SSEEEEECTTT-CEEESC-------------------CEEECTTCEEEEEESCEEEEECTTEE---TSCCSEEEC-SCEE
T ss_pred CCceEEEecCC-eEEecc-------------------eEEEecCCCcEEEeCeEEEccccccc---ccCCceeec-CCCc
Confidence 46888888753 334321 2566 57899999999998532111 112344443 4678
Q ss_pred eEEEceEEec----eeee-EeccceeEEeeeEEE
Q 039106 192 AAFTGCKFIG----SVDF-IFGNGLSFYEDCHLH 220 (345)
Q Consensus 192 ~~f~nC~~~G----~VDF-IfG~~~a~f~~c~i~ 220 (345)
..+.+|.|.. ..|. .-|.-...+++|.|.
T Consensus 164 VwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~ 197 (359)
T 1idk_A 164 VWIDHVTTARIGRQHYVLGTSADNRVSLTNNYID 197 (359)
T ss_dssp EEEESCEEEEESSCSEEECCCTTCEEEEESCEEE
T ss_pred EEEEeeEeecCCCCcEEecccCcceEEEECcEec
Confidence 8999999982 2222 123446778888886
No 25
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.14 E-value=0.073 Score=51.06 Aligned_cols=143 Identities=15% Similarity=0.097 Sum_probs=84.1
Q ss_pred ccHHHHHHhCCCCCcceEEEEEeCceeeee---------------EeecccCceEEEEecCCCceEEecCCCcccCCCCC
Q 039106 77 VTVQKAINSLPVINLCRVVIFISAGTYREK---------------VEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSG 141 (345)
Q Consensus 77 ~TIq~AI~aap~~~~~r~~I~I~~G~Y~E~---------------v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G 141 (345)
..+++||+..+. +++.+|.+ .|++.-. +.|.. .+++||+|... .|.
T Consensus 24 ~~L~~al~~~~~--~~p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v-~sn~TI~G~~a---~i~------------ 84 (330)
T 2qy1_A 24 EAMQSAIDSYSG--SGGLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKN-KSDVTIKGANG---SAA------------ 84 (330)
T ss_dssp HHHHHHHHHSCS--SSCEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEES-CCSEEEEECTT---CBB------------
T ss_pred HHHHHHHhccCC--CCCEEEEE-ccEEecccccccccccccccceeEEEc-CCCeEEECCCc---EEe------------
Confidence 378899987553 24567766 6776521 23321 45666666432 111
Q ss_pred CCCCCcccceeeee--cCceEEEeeeeecCCCCCCCCCCCCceEEEEE----eCCeeEEEceEE---------------e
Q 039106 142 RPLGTYASATFAVN--SPYFIAKNITFKNKAPLPPSGALGKQAVAFRI----SADTAAFTGCKF---------------I 200 (345)
Q Consensus 142 ~~~gt~~sATv~V~--a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v----~gd~~~f~nC~~---------------~ 200 (345)
..-|.+. +++++++||+|++-.+ + .+..|+-+.- .+++..+.+|.| .
T Consensus 85 -------g~gl~i~~~~~NVIIrnl~i~~~~~----~-~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~D 152 (330)
T 2qy1_A 85 -------NFGIRVVGNAHNVIIQNMTIGLLQG----G-EDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFD 152 (330)
T ss_dssp -------SSEEEEESSCEEEEEESCEEESCSS----G-GGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSC
T ss_pred -------eeeEEEeCCCCeEEEeCeEEeCCCC----C-CCCcceeeccccCcccccEEEEeEEEEccccccccCCcceee
Confidence 1245665 7899999999997642 1 1223343332 377899999999 4
Q ss_pred ceeeeEeccceeEEeeeEEEEeeCCCCeeEeeccCCCC-CcceeEEEccEEee
Q 039106 201 GSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLL-EETGFSFVKCKVTG 252 (345)
Q Consensus 201 G~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~-~~~G~vf~nc~it~ 252 (345)
|.+|..-|.-..-+++|.|+... .+++.=.+..... ......|+++.|..
T Consensus 153 g~idi~~~s~~VTISnn~f~~h~--k~~L~G~sd~~~~~~~~~vT~h~N~f~~ 203 (330)
T 2qy1_A 153 GGIDMKKGVHHVTVSYNYVYNYQ--KVALNGYSDSDTKNSAARTTYHHNRFEN 203 (330)
T ss_dssp CSEEEESSCEEEEEESCEEEEEE--ECCEESSSTTCGGGGGCEEEEESCEEEE
T ss_pred cccccccCcceEEEEcceeccCC--eEEEECCCCccccCCCceEEEECcEEcC
Confidence 67888777778889999997532 2333322111000 11355677776643
No 26
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=96.13 E-value=0.096 Score=50.77 Aligned_cols=28 Identities=18% Similarity=0.089 Sum_probs=20.0
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceeee
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYRE 105 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~E 105 (345)
+..||+|++++... ..-+|+|.+|+|-.
T Consensus 35 ~~aiq~ai~~c~~~--~g~~v~vP~G~~l~ 62 (362)
T 1czf_A 35 AAAAKAGKAKCSTI--TLNNIEVPAGTTLD 62 (362)
T ss_dssp HHHHHHHGGGCSEE--EEESCEECTTCCEE
T ss_pred HHHHHHHHHHhhcc--CCCEEEECCCEEEE
Confidence 45799999988741 22378889998863
No 27
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=96.11 E-value=0.096 Score=54.19 Aligned_cols=122 Identities=11% Similarity=0.005 Sum_probs=63.0
Q ss_pred eeee-cCceEEEeeeeecCCCCCCC--CC-------------CCCceEEEEEe-CCeeEEEceEEeceeeeE-e--c---
Q 039106 152 FAVN-SPYFIAKNITFKNKAPLPPS--GA-------------LGKQAVAFRIS-ADTAAFTGCKFIGSVDFI-F--G--- 208 (345)
Q Consensus 152 v~V~-a~~f~a~nitf~Nt~~~~~~--g~-------------~~~QAvAl~v~-gd~~~f~nC~~~G~VDFI-f--G--- 208 (345)
|.+. .+++.++||+|+|+...... +. ...-.-++.+. +....+.||.|.-.-|-| + |
T Consensus 334 i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~ 413 (608)
T 2uvf_A 334 MTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGE 413 (608)
T ss_dssp EEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSG
T ss_pred EEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCc
Confidence 4443 67899999999997432100 00 00001123333 245667777776223322 2 2
Q ss_pred -------cceeEEeeeEEEEeeCCCCeeEeeccCCCCCcceeEEEccEEeecc-----cEEeeecccccceEEEEcccCC
Q 039106 209 -------NGLSFYEDCHLHAITNSYGALTAQKRGSLLEETGFSFVKCKVTGSG-----ALYLGRAWGTFSRVVFAYTYMD 276 (345)
Q Consensus 209 -------~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~~~~G~vf~nc~it~~g-----~~yLGRpW~~~srvvf~~t~~~ 276 (345)
....+++||.+.. ..|.+.- +......-..+.|.||++.+.. ++.-||. +.-..+.|.+..|.
T Consensus 414 ~g~~~~~s~nI~I~n~~~~~---ghg~~~i-GS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~g-G~v~nI~~~ni~m~ 488 (608)
T 2uvf_A 414 KAQEQEPMKGAWLFNNYFRM---GHGAIVT-GSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIG-GGARNVTFRNNAMR 488 (608)
T ss_dssp GGGGSCCEEEEEEESCEECS---SSCSEEE-ESCCTTCEEEEEEESCEEESCSEEEEEEEETTTC-CEEEEEEEEEEEEE
T ss_pred cccccccccCEEEEeEEEeC---CCCeEEE-cccCCCCEEEEEEEeEEEECCCceEEEeeecCCC-ceEECcEEEeeEEE
Confidence 1346677776643 1233322 2222233456789999998763 2333332 23456778888877
Q ss_pred cc
Q 039106 277 KI 278 (345)
Q Consensus 277 ~~ 278 (345)
++
T Consensus 489 ~v 490 (608)
T 2uvf_A 489 DL 490 (608)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 28
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=96.09 E-value=0.17 Score=52.38 Aligned_cols=46 Identities=28% Similarity=0.530 Sum_probs=35.4
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceee--eeEeecccCceEEEEecCCCceEEecC
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYR--EKVEIPTTMAYITMIGAGADNTVIEWD 131 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~--E~v~I~~~k~~ItL~G~g~~~tiI~~~ 131 (345)
=.-||+||++. -+|+|.+|+|. ..|.++ .+++|.|++...++|.+.
T Consensus 39 T~Aiq~Ai~~G-------g~V~iP~GtYlis~~l~l~---snv~L~g~g~~~t~L~~~ 86 (609)
T 3gq8_A 39 IRAFEKAIESG-------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFM 86 (609)
T ss_dssp HHHHHHHHHTS-------SCEEECSEEEEESSCEEEC---SSEEEEESCTTTEEEEEC
T ss_pred HHHHHHHHHcC-------CEEEECCccEEEeCceEEC---CCcEEEEeeCCCCEEEeC
Confidence 35699999972 28999999997 467774 479999998766777654
No 29
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=96.02 E-value=0.22 Score=49.29 Aligned_cols=117 Identities=17% Similarity=0.197 Sum_probs=69.3
Q ss_pred CceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeee-ecCceEEEeeeeecCCCCC-----CCCCCC---CceE
Q 039106 113 MAYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAV-NSPYFIAKNITFKNKAPLP-----PSGALG---KQAV 183 (345)
Q Consensus 113 k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V-~a~~f~a~nitf~Nt~~~~-----~~g~~~---~QAv 183 (345)
.+|+||+|.|.+. .|.+ .-|.+ .+++++++||+|++..... ..+..+ ...-
T Consensus 131 ~snkTI~G~G~~~-~i~g-------------------~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~D 190 (416)
T 1vbl_A 131 GSNTSIIGVGKDA-KIKG-------------------GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYD 190 (416)
T ss_dssp CSSEEEEECTTCC-EEES-------------------CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCC
T ss_pred CCCeeEEecCCCe-EEec-------------------CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCc
Confidence 4579999987543 3432 13455 4689999999999864310 111000 1112
Q ss_pred EEEE-eCCeeEEEceEEe---------------------ceeeeEeccceeEEeeeEEEEeeCCCCeeEeeccCCCCCc-
Q 039106 184 AFRI-SADTAAFTGCKFI---------------------GSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLLEE- 240 (345)
Q Consensus 184 Al~v-~gd~~~f~nC~~~---------------------G~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~~~- 240 (345)
||.+ .+.+..+.+|.|. |.+|+.-|.-...+.+|.|.... .+++.=.+- +..+.
T Consensus 191 aI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~DGl~Di~~~s~~VTISnn~f~~h~--k~~LiG~sd-~~~~d~ 267 (416)
T 1vbl_A 191 SISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQHDGALDIKNSSDFITISYNVFTNHD--KVTLIGASD-SRMADS 267 (416)
T ss_dssp SEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEESSCEEEEEESCEEEEEE--ECCEECSCT-TCGGGT
T ss_pred eEEecCCceEEEEccEEecCCCcccccccccCcceeecccceeeecCCCcEEEEeeEEcCCC--ceeEeCCCC-CCcccC
Confidence 4444 4567888999986 44566656667788999997643 244442221 11122
Q ss_pred --ceeEEEccEEee
Q 039106 241 --TGFSFVKCKVTG 252 (345)
Q Consensus 241 --~G~vf~nc~it~ 252 (345)
....|+++.|..
T Consensus 268 g~~~VT~hhN~f~~ 281 (416)
T 1vbl_A 268 GHLRVTLHHNYYKN 281 (416)
T ss_dssp TCCCEEEESCEEEE
T ss_pred CceEEEEECcEecC
Confidence 347888888854
No 30
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=96.00 E-value=0.19 Score=49.50 Aligned_cols=116 Identities=16% Similarity=0.236 Sum_probs=70.1
Q ss_pred CceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeeeecCceEEEeeeeecCCCC-C----CCCC-----CCCce
Q 039106 113 MAYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAVNSPYFIAKNITFKNKAPL-P----PSGA-----LGKQA 182 (345)
Q Consensus 113 k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V~a~~f~a~nitf~Nt~~~-~----~~g~-----~~~QA 182 (345)
.+|+||+|.|.+. .|.+ ..|.|..++++++||+|++.... + ..+. .+.-|
T Consensus 126 ~snkTI~G~G~~~-~i~g-------------------~gl~i~~~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~Da 185 (399)
T 2o04_A 126 PANTTIVGSGTNA-KVVG-------------------GNFQIKSDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDN 185 (399)
T ss_dssp CSSEEEEESSSCC-EEES-------------------CEEEECSEEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCS
T ss_pred CCCceEEeccCCe-EEee-------------------CEEEeeCCCEEEeCeEEecCccccccccccccccccccCCCCe
Confidence 4679999987643 3432 24667678999999999986421 0 1010 11233
Q ss_pred EEEEEeCCeeEEEceEEe---------------------ceeeeEeccceeEEeeeEEEEeeCCCCeeEeeccCCCCC--
Q 039106 183 VAFRISADTAAFTGCKFI---------------------GSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLLE-- 239 (345)
Q Consensus 183 vAl~v~gd~~~f~nC~~~---------------------G~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~~-- 239 (345)
+-+ -.+.+..+.+|.|. |.+|+.-|.-...+.+|.|.... .+++.=.+- +..+
T Consensus 186 I~i-~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTISnn~f~~h~--k~~LiG~sd-~~~~d~ 261 (399)
T 2o04_A 186 ITI-NGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHD--KSSIFGSSD-SKTSDD 261 (399)
T ss_dssp EEE-ESCEEEEEESCEEECTTCCGGGSCEETTEECCCCCCSEEEETTCEEEEEESCEEEEEE--ECCEESCCT-TCGGGT
T ss_pred EEe-cCCCcEEEEeeeeecCCCccccccccccceeeccccceeeeccCCcEEEEeeEEcCCC--ceeEeCCCC-CCcccc
Confidence 433 24567889999986 44566656667788999997543 244442221 1111
Q ss_pred -cceeEEEccEEee
Q 039106 240 -ETGFSFVKCKVTG 252 (345)
Q Consensus 240 -~~G~vf~nc~it~ 252 (345)
.....|+++.|..
T Consensus 262 g~~~vT~h~N~f~~ 275 (399)
T 2o04_A 262 GKLKITLHHNRYKN 275 (399)
T ss_dssp TCCCEEEESCEEEE
T ss_pred CceeEEEECcEecC
Confidence 2357888888854
No 31
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=95.93 E-value=0.11 Score=50.50 Aligned_cols=144 Identities=15% Similarity=0.194 Sum_probs=83.6
Q ss_pred HHHHHHhCCCCCcceEEEEEeCceee----------------eeEeecccCceEEEEecCCCceEEecCCCcccCCCCCC
Q 039106 79 VQKAINSLPVINLCRVVIFISAGTYR----------------EKVEIPTTMAYITMIGAGADNTVIEWDDTADRMGQSGR 142 (345)
Q Consensus 79 Iq~AI~aap~~~~~r~~I~I~~G~Y~----------------E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~~~~~~~G~ 142 (345)
+.+||. ..+++.+|.| .|+.. .+|.| .+|+||+|.|.+. .|.+
T Consensus 44 L~~al~----~~~~p~vI~V-~GtI~~~~~~~~~s~~~~~~~~~l~v---~snkTI~G~G~~~-~i~g------------ 102 (361)
T 1pe9_A 44 FTSALS----AGAEAKIIQI-KGTIDISGGTPYTDFADQKARSQINI---PANTTVIGLGTDA-KFIN------------ 102 (361)
T ss_dssp HHHHHT----TTTSCEEEEE-CSEEETTTTCCCCSHHHHHHHSEEEC---CSSEEEEECTTCC-EEES------------
T ss_pred HHHHHh----cCCCcEEEEE-CCEEecCCccccccccccccceeEEe---cCCcEEEccCCCe-EEec------------
Confidence 555553 2334667765 57664 24555 3679999987643 3432
Q ss_pred CCCCcccceeee----ecCceEEEeeeeecCCCCCC---CCC-CCCceEEEEEeC--CeeEEEceEEe------------
Q 039106 143 PLGTYASATFAV----NSPYFIAKNITFKNKAPLPP---SGA-LGKQAVAFRISA--DTAAFTGCKFI------------ 200 (345)
Q Consensus 143 ~~gt~~sATv~V----~a~~f~a~nitf~Nt~~~~~---~g~-~~~QAvAl~v~g--d~~~f~nC~~~------------ 200 (345)
.-|.| .+++++++||+|++...... ++. -+...-||.+.+ .+..+.+|.|.
T Consensus 103 -------~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~ 175 (361)
T 1pe9_A 103 -------GSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTK 175 (361)
T ss_dssp -------SEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEE
T ss_pred -------CEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccc
Confidence 13555 46899999999998642100 000 001123566655 67888999986
Q ss_pred ---------ceeeeEeccceeEEeeeEEEEeeCCCCeeEeeccCCC---CCcceeEEEccEEee
Q 039106 201 ---------GSVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSL---LEETGFSFVKCKVTG 252 (345)
Q Consensus 201 ---------G~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~---~~~~G~vf~nc~it~ 252 (345)
|.+|+.-|.-..-+.+|.|.... .+++.-.+-... .......|+++.|..
T Consensus 176 ~G~~~~~~DgllDi~~~s~~VTiS~n~f~~h~--k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~ 237 (361)
T 1pe9_A 176 DGETYVQHDGALDIKRGSDYVTISNSLIDQHD--KTMLIGHSDSNGSQDKGKLHVTLFNNVFNR 237 (361)
T ss_dssp TTEECCCCCCSEEECTTCEEEEEESCEEEEEE--ECEEESCCTTCHHHHTTCCEEEEESCEEEE
T ss_pred cCcceeeccceeeeecCCCcEEEEeeEEcCCC--ceeEecCCCCCcccccCcceEEEECeEEcC
Confidence 44566666677788999997643 244442221000 012357888887753
No 32
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=95.68 E-value=0.13 Score=51.37 Aligned_cols=41 Identities=12% Similarity=0.180 Sum_probs=27.3
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceee-eeEeecccCceEEEEec
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYR-EKVEIPTTMAYITMIGA 121 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~-E~v~I~~~k~~ItL~G~ 121 (345)
=.-||+||+++... +.-+|+|.+|+|- ..|.+ |.+|+|..+
T Consensus 44 t~Aiq~Ai~~c~~~--ggg~v~vP~G~yl~~~l~l---~s~v~l~l~ 85 (448)
T 3jur_A 44 SESFKRAIEELSKQ--GGGRLIVPEGVFLTGPIHL---KSNIELHVK 85 (448)
T ss_dssp HHHHHHHHHHHHHH--TCEEEEECSSEEEESCEEC---CTTEEEEES
T ss_pred HHHHHHHHHhhhhc--CCeEEEECCCcEEEeeeEe---CCCcEEEEE
Confidence 35699999987641 1348999999995 33444 345666555
No 33
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=95.21 E-value=0.3 Score=51.74 Aligned_cols=46 Identities=28% Similarity=0.530 Sum_probs=33.8
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCceee--eeEeecccCceEEEEecCCCceEEecC
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAGTYR--EKVEIPTTMAYITMIGAGADNTVIEWD 131 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G~Y~--E~v~I~~~k~~ItL~G~g~~~tiI~~~ 131 (345)
=.-||+||++. -+|+|.+|+|. ..|.++ .+++|.|++...++|...
T Consensus 39 T~Aiq~Ai~aG-------g~V~IPaGtYlisg~I~L~---snv~L~Geg~~~t~Lk~~ 86 (772)
T 3gqn_A 39 IRAFEKAIESG-------FPVYVPYGTFMVSRGIKLP---SNTVLTGAGKRNAVIRFM 86 (772)
T ss_dssp HHHHHHHHHTT-------SCEEECSEEEEESSCEEEC---SSCEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHcC-------CEEEECCccEEEEeEEEEC---CCcEEEEecCCCCEEEeC
Confidence 35699999972 28999999997 457774 468899887555666543
No 34
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=94.59 E-value=0.43 Score=45.63 Aligned_cols=37 Identities=14% Similarity=0.011 Sum_probs=18.2
Q ss_pred ceeEEEccEEeecc-----cEEeeecccccceEEEEcccCCc
Q 039106 241 TGFSFVKCKVTGSG-----ALYLGRAWGTFSRVVFAYTYMDK 277 (345)
Q Consensus 241 ~G~vf~nc~it~~g-----~~yLGRpW~~~srvvf~~t~~~~ 277 (345)
..+.|.||++.+.. +++-||+=+.-..+.|.+-.|.+
T Consensus 209 ~nV~v~n~~~~~t~~girIKt~~g~~~G~v~nI~f~ni~~~~ 250 (335)
T 1k5c_A 209 SNVVIKGNTVTRSMYGVRIKAQRTATSASVSGVTYDANTISG 250 (335)
T ss_dssp EEEEEESCEEEEEEEEEEEEEETTCCSCEEEEEEEESCEEEE
T ss_pred EEEEEEeeEEECCCceEEEEEeCCCCcceEeeeEEEEEEEEc
Confidence 34566677666532 23323221224556666666554
No 35
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=90.72 E-value=4 Score=41.64 Aligned_cols=105 Identities=12% Similarity=0.097 Sum_probs=65.5
Q ss_pred eecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeC-Ce--eEEEceEEec----eeeeEeccceeEEeeeEEEEeeCCC
Q 039106 154 VNSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISA-DT--AAFTGCKFIG----SVDFIFGNGLSFYEDCHLHAITNSY 226 (345)
Q Consensus 154 V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~g-d~--~~f~nC~~~G----~VDFIfG~~~a~f~~c~i~~~~~~~ 226 (345)
....++.+++|+++|+.. ..+.+.... +. ..+.+|.+.. +.|=|==.-..++++|.|.+-.+
T Consensus 290 ~~c~nV~I~Giti~Nsp~---------w~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~~nV~I~n~~i~~gDD-- 358 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPF---------NSMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMYPGTILQDVFYHTDDD-- 358 (549)
T ss_dssp SSCEEEEEESCEEECCSS---------CSEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCCTTCEEEEEEEEESSC--
T ss_pred CCceEEEEECcEEECCCc---------eeEEeeccCCCCCeEEEEeeEeEcCCCCCCCcccccCCEEEEeeEEeCCCC--
Confidence 456789999999999852 333333333 45 6788888752 12221111667889999987432
Q ss_pred CeeEeeccCCCCCcceeEEEccEEeec--cc-EEeeecccccceEEEEcccCCc
Q 039106 227 GALTAQKRGSLLEETGFSFVKCKVTGS--GA-LYLGRAWGTFSRVVFAYTYMDK 277 (345)
Q Consensus 227 g~ItA~~r~~~~~~~G~vf~nc~it~~--g~-~yLGRpW~~~srvvf~~t~~~~ 277 (345)
.|.--+ ..++|.||++.+. +. .-+|.--..-..+.|.+|.|.+
T Consensus 359 -cIaIks-------~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~ 404 (549)
T 1x0c_A 359 -GLKMYY-------SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIH 404 (549)
T ss_dssp -CEECCS-------SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEE
T ss_pred -EEEECC-------CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEEC
Confidence 232211 5788999998753 24 6788744445677788888754
No 36
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=87.59 E-value=12 Score=38.46 Aligned_cols=100 Identities=11% Similarity=0.065 Sum_probs=61.2
Q ss_pred ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCee--EEEceEEe---ce----eeeEeccceeEEeeeEEEEeeCC
Q 039106 155 NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTA--AFTGCKFI---GS----VDFIFGNGLSFYEDCHLHAITNS 225 (345)
Q Consensus 155 ~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~--~f~nC~~~---G~----VDFIfG~~~a~f~~c~i~~~~~~ 225 (345)
...++.+++|+++|+... .+-+ ...+.. .+.+|.+. +. +|+- -..++++|.|.+-.+
T Consensus 331 ~c~NV~I~Giti~NSp~w---------~i~~-~~c~nV~~~I~nv~i~~~~~~nTDGIDi~---~NV~I~nc~I~~gDD- 396 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPFN---------TMDF-NGNSGISSQISDYKQVGAFFFQTDGPEIY---PNSVVHDVFWHVNDD- 396 (574)
T ss_dssp SSEEEEEESCEEECCSSC---------SEEE-CSSSCEEEEEEEEEEECCCSTTCCCCBCC---TTCEEEEEEEEESSC-
T ss_pred CceeEEEECeEEECCCCc---------EEee-cCCCChhhEEEeeEeeCCCCCCCccCccc---CCEEEEeeEEECCCC-
Confidence 578899999999997421 1221 234555 67777765 21 3332 567788888887432
Q ss_pred CCeeEeeccCCCCCcceeEEEccEEeec-c-c-EEeeecccccceEEEEcccCCc
Q 039106 226 YGALTAQKRGSLLEETGFSFVKCKVTGS-G-A-LYLGRAWGTFSRVVFAYTYMDK 277 (345)
Q Consensus 226 ~g~ItA~~r~~~~~~~G~vf~nc~it~~-g-~-~yLGRpW~~~srvvf~~t~~~~ 277 (345)
+ |.-.+ .-++|.||++... + . ..+|---..-..+.|-+|.|.+
T Consensus 397 -c-IaIks-------~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~ 442 (574)
T 1ogo_X 397 -A-IKIYY-------SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIH 442 (574)
T ss_dssp -S-EECCS-------TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEE
T ss_pred -E-EEECC-------ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEEC
Confidence 2 32211 4568888887653 2 3 6777533444567777777755
No 37
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=87.43 E-value=1.9 Score=40.95 Aligned_cols=82 Identities=17% Similarity=0.278 Sum_probs=53.5
Q ss_pred ceEEEEEeCCeeEEEceEEec--------eeeeEeccceeEEeeeEEEEeeCCCCeeEeeccCCCCCcceeEEEccEEee
Q 039106 181 QAVAFRISADTAAFTGCKFIG--------SVDFIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLLEETGFSFVKCKVTG 252 (345)
Q Consensus 181 QAvAl~v~gd~~~f~nC~~~G--------~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~~~~G~vf~nc~it~ 252 (345)
+...|.+.++...++|..|.. .+-+-.....+.|++|.|... |.+ +.+++. .-.|.+|.|.|
T Consensus 85 ~satv~v~a~~f~~~nlt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~--QDT-Ly~~~~-------r~~~~~c~I~G 154 (319)
T 1gq8_A 85 NSATVAAVGAGFLARDITFQNTAGAAKHQAVALRVGSDLSAFYRCDILAY--QDS-LYVHSN-------RQFFINCFIAG 154 (319)
T ss_dssp GGCSEEECSTTCEEEEEEEEECCCGGGCCCCSEEECCTTEEEEEEEEECS--TTC-EEECSS-------EEEEESCEEEE
T ss_pred ceEEEEEECCCEEEEEeEeEccCCCcCCceEEEEecCCcEEEEEeEECcc--cee-eeecCc-------cEEEEecEEEe
Confidence 334677889999999999982 122223445688999999864 334 333321 13678888888
Q ss_pred cccEEeeecccccceEEEEcccCCc
Q 039106 253 SGALYLGRAWGTFSRVVFAYTYMDK 277 (345)
Q Consensus 253 ~g~~yLGRpW~~~srvvf~~t~~~~ 277 (345)
+...-+|+ +.++|.+|.|-.
T Consensus 155 ~vDFIfG~-----~~a~f~~c~i~~ 174 (319)
T 1gq8_A 155 TVDFIFGN-----AAVVLQDCDIHA 174 (319)
T ss_dssp SSSCEEES-----CEEEEESCEEEE
T ss_pred eeeEEecC-----CcEEEEeeEEEE
Confidence 76655564 457777777653
No 38
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=86.92 E-value=1.9 Score=40.99 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=53.8
Q ss_pred ceEEEEEeCCeeEEEceEEec--------eeeeEeccceeEEeeeEEEEeeCCCCeeEee-ccCCCCCcceeEEEccEEe
Q 039106 181 QAVAFRISADTAAFTGCKFIG--------SVDFIFGNGLSFYEDCHLHAITNSYGALTAQ-KRGSLLEETGFSFVKCKVT 251 (345)
Q Consensus 181 QAvAl~v~gd~~~f~nC~~~G--------~VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~-~r~~~~~~~G~vf~nc~it 251 (345)
+...+.+.++...++|..|.. .|-+-.....+.|++|.|... |.. +.++ +| -.|.+|.|.
T Consensus 81 ~satv~v~a~~f~~~~lt~~Nt~g~~~~qAvAl~v~~d~~~f~~c~f~g~--QDT-Ly~~~~r--------~~~~~c~I~ 149 (317)
T 1xg2_A 81 RSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAY--QDT-LYAHSQR--------QFYRDSYVT 149 (317)
T ss_dssp GGCSEEECSTTCEEESCEEEECCCGGGCCCCSEEECCTTEEEESCEEECS--TTC-EEECSSE--------EEEESCEEE
T ss_pred ceeEEEEECCCEEEEEeEEecccCCccCceEEEEEeCCcEEEEEeEeCcc--ccc-eeecCcc--------EEEEeeEEE
Confidence 344677899999999999982 122223345688999999864 334 3333 22 267888888
Q ss_pred ecccEEeeecccccceEEEEcccCCc
Q 039106 252 GSGALYLGRAWGTFSRVVFAYTYMDK 277 (345)
Q Consensus 252 ~~g~~yLGRpW~~~srvvf~~t~~~~ 277 (345)
|+-..-+|+ +.++|.+|.|-.
T Consensus 150 G~vDFIfG~-----~~avf~~c~i~~ 170 (317)
T 1xg2_A 150 GTVDFIFGN-----AAVVFQKCQLVA 170 (317)
T ss_dssp ESSSCEEEC-----CEEEEESCEEEE
T ss_pred eceeEEcCC-----ceEEEeeeEEEE
Confidence 876666664 457777777753
No 39
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=84.96 E-value=3 Score=40.43 Aligned_cols=80 Identities=13% Similarity=0.239 Sum_probs=53.6
Q ss_pred EEEEEeCCeeEEEceEEece----------------------eeeEe--ccceeEEeeeEEEEeeCCCCeeEeeccCCCC
Q 039106 183 VAFRISADTAAFTGCKFIGS----------------------VDFIF--GNGLSFYEDCHLHAITNSYGALTAQKRGSLL 238 (345)
Q Consensus 183 vAl~v~gd~~~f~nC~~~G~----------------------VDFIf--G~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~ 238 (345)
..+.|.++....+|+.|.-+ |-.-. ..-.+.|.+|.|.... -.+.++..
T Consensus 115 aTv~V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~Q---DTLy~~~~---- 187 (364)
T 3uw0_A 115 STVLVNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQ---DTLYSKTG---- 187 (364)
T ss_dssp CSEEECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSB---SCEEECTT----
T ss_pred eEEEEECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecc---cceEeCCC----
Confidence 46788999999999999833 22222 2346899999998643 33444311
Q ss_pred CcceeEEEccEEeecccEEeeecccccceEEEEcccCC
Q 039106 239 EETGFSFVKCKVTGSGALYLGRAWGTFSRVVFAYTYMD 276 (345)
Q Consensus 239 ~~~G~vf~nc~it~~g~~yLGRpW~~~srvvf~~t~~~ 276 (345)
.--.|.+|.|.|+-..-+|+ ++++|.+|.|-
T Consensus 188 --gr~yf~~c~I~GtvDFIFG~-----a~a~f~~c~i~ 218 (364)
T 3uw0_A 188 --SRSYFSDCEISGHVDFIFGS-----GITVFDNCNIV 218 (364)
T ss_dssp --CEEEEESCEEEESEEEEEES-----SEEEEESCEEE
T ss_pred --CCEEEEcCEEEcCCCEECCc-----ceEEEEeeEEE
Confidence 12378888888876666674 66777777764
No 40
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=83.75 E-value=2.9 Score=43.14 Aligned_cols=42 Identities=21% Similarity=0.182 Sum_probs=29.4
Q ss_pred CccHHHHHHhCCCCCcceEEEEEeCc-eeee-------------eEeecccCceEEEEecC
Q 039106 76 FVTVQKAINSLPVINLCRVVIFISAG-TYRE-------------KVEIPTTMAYITMIGAG 122 (345)
Q Consensus 76 f~TIq~AI~aap~~~~~r~~I~I~~G-~Y~E-------------~v~I~~~k~~ItL~G~g 122 (345)
=+-||+||+++... ..-+|+|.+| +|-- .|.+ |.+++|.-++
T Consensus 64 T~AIqkAIdaCs~~--GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~L---kSnVtL~LdG 119 (600)
T 2x6w_A 64 RQYLQAAIDYVSSN--GGGTITIPAGYTWYLGSYGVGGIAGHSGIIQL---RSNVNLNIEG 119 (600)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEECTTCEEEECSCCCGGGGGGTEEEEC---CTTEEEEECS
T ss_pred HHHHHHHHHHhhhc--CCCEEEECCCCEEEecccccccccccccceEE---cCceEEeeec
Confidence 34699999987642 1248999999 9854 3555 4567777666
No 41
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=83.39 E-value=32 Score=34.41 Aligned_cols=46 Identities=26% Similarity=0.481 Sum_probs=33.7
Q ss_pred CCccHHHHHHhCCCCCcceEEEEEeCc----eee--eeEeecccCceEEEEecCCC
Q 039106 75 NFVTVQKAINSLPVINLCRVVIFISAG----TYR--EKVEIPTTMAYITMIGAGAD 124 (345)
Q Consensus 75 ~f~TIq~AI~aap~~~~~r~~I~I~~G----~Y~--E~v~I~~~k~~ItL~G~g~~ 124 (345)
|-.-||+||+++.... +.-+|+|.+| +|. ..|.|+ .+++|.|++..
T Consensus 67 DTaAIQkAIdaA~a~~-GGGtVyVPaG~~~~tYlvt~tI~Lk---SnV~L~Ge~~A 118 (514)
T 2vbk_A 67 NYQAIQNAIDAVASLP-SGGELFIPASNQAVGYIVGSTLLIP---GGVNIRGVGKA 118 (514)
T ss_dssp CHHHHHHHHHHHHTST-TCEEEECCCCSSTTCEEESSCEEEC---TTEEEECCSTT
T ss_pred cHHHHHHHHHHHhhcC-CCeEEEECCCCcceeEEECCeEEec---CCeEEEEecCc
Confidence 4678999999764321 2348999999 886 467773 47999998754
No 42
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=82.76 E-value=0.0088 Score=59.64 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=65.6
Q ss_pred EEcCCCCCCCCccHHHHHHhCCCCCcceE------EEEEeCceeeeeEeecccCceEEEEecCC--C-ceEEecCCCccc
Q 039106 66 KVNKNPRLGNFVTVQKAINSLPVINLCRV------VIFISAGTYREKVEIPTTMAYITMIGAGA--D-NTVIEWDDTADR 136 (345)
Q Consensus 66 vV~~d~G~g~f~TIq~AI~aap~~~~~r~------~I~I~~G~Y~E~v~I~~~k~~ItL~G~g~--~-~tiI~~~~~~~~ 136 (345)
.|+-+ ..|.+ +|+|.+.++-..+.+. .+-|++|+|.|++.|+.++|++++.|-+. . .|.|+++..+
T Consensus 295 ~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 369 (432)
T 1vcl_A 295 MVGCD-QNGKV--SQQISNTISFSSTVTAGVAVEVSSTIEKGVIFAKATVSVKVTASLSKAWTNSQSGTTAITYTCDN-- 369 (432)
T ss_dssp EEEEE-TTSCC--EEEECCEEECSSCCCHHHHHHHHHHHHHCCEETTEECCHHHHHHHHHHHHTTCSCCCCEEEECCB--
T ss_pred ccccC-CCCcE--EEeccceEEEeccccccEEEEEEEeeccceEEEEEEeecccchhhhhhhccCCCCcEEEEEecCC--
Confidence 34433 44555 4777776655443333 67899999999999999999999988553 3 3789987543
Q ss_pred CCCCCCCCCCcccceeeeecCceEEEeeeeecCC
Q 039106 137 MGQSGRPLGTYASATFAVNSPYFIAKNITFKNKA 170 (345)
Q Consensus 137 ~~~~G~~~gt~~sATv~V~a~~f~a~nitf~Nt~ 170 (345)
+.|++..++|-.|.+++-|-|-.+
T Consensus 370 ----------~~~~~~~~~~~~~~~~~~~~~~~~ 393 (432)
T 1vcl_A 370 ----------YDSDEEFTRGCMWQLAIETTEVKS 393 (432)
T ss_dssp ----------CTTSSBCSSEEEEEEEEEEEETTT
T ss_pred ----------CcccChhhccceEEEeeeeeeccc
Confidence 356888899999999999887554
No 43
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=80.93 E-value=3.8 Score=39.29 Aligned_cols=79 Identities=15% Similarity=0.278 Sum_probs=48.8
Q ss_pred EEEEEeCCeeEEEceEEeceee----------------------e-Eec-cceeEEeeeEEEEeeCCCCeeEeeccCCCC
Q 039106 183 VAFRISADTAAFTGCKFIGSVD----------------------F-IFG-NGLSFYEDCHLHAITNSYGALTAQKRGSLL 238 (345)
Q Consensus 183 vAl~v~gd~~~f~nC~~~G~VD----------------------F-IfG-~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~ 238 (345)
..|.+.++....+|..|..+-+ + |.- ...+.|++|.|... |....+..+|
T Consensus 89 atv~v~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~--QDTLy~~~gr---- 162 (342)
T 2nsp_A 89 STITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGY--QATLYVSGGR---- 162 (342)
T ss_dssp CSEEECSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECS--TTCEEECSSE----
T ss_pred eEEEEECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecc--cceEEECCCC----
Confidence 4677889999999999984331 1 122 23577999999864 3343332222
Q ss_pred CcceeEEEccEEeecccEEeeecccccceEEEEcccCC
Q 039106 239 EETGFSFVKCKVTGSGALYLGRAWGTFSRVVFAYTYMD 276 (345)
Q Consensus 239 ~~~G~vf~nc~it~~g~~yLGRpW~~~srvvf~~t~~~ 276 (345)
-.|.+|.|.|+-..-+|+ ++++|.+|.|-
T Consensus 163 ----~~~~~c~I~G~vDFIFG~-----a~a~f~~c~i~ 191 (342)
T 2nsp_A 163 ----SFFSDCRISGTVDFIFGD-----GTALFNNCDLV 191 (342)
T ss_dssp ----EEEESCEEEESEEEEEES-----SEEEEESCEEE
T ss_pred ----EEEEcCEEEeceEEEeCC-----ceEEEecCEEE
Confidence 467777777765555553 45666666553
No 44
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=78.23 E-value=12 Score=39.48 Aligned_cols=102 Identities=19% Similarity=0.292 Sum_probs=65.8
Q ss_pred CCccHHHHHHhCCCCCcceEEEEEeCceee--eeEeecccCceEEEEecCCCceEEecCCCc-ccCCCCCCCCCCcccce
Q 039106 75 NFVTVQKAINSLPVINLCRVVIFISAGTYR--EKVEIPTTMAYITMIGAGADNTVIEWDDTA-DRMGQSGRPLGTYASAT 151 (345)
Q Consensus 75 ~f~TIq~AI~aap~~~~~r~~I~I~~G~Y~--E~v~I~~~k~~ItL~G~g~~~tiI~~~~~~-~~~~~~G~~~gt~~sAT 151 (345)
|=..||+||+++..+. +|++.+|+|. ..|.|| +++.|+|++- .+|...... .+. + ...+.
T Consensus 416 DT~Ai~~al~aa~~g~----~v~~P~G~Y~vt~Ti~ip---~~~~ivG~~~--~~I~~~G~~F~d~-------~-~P~pv 478 (758)
T 3eqn_A 416 DTQAIKNVFAKYAGCK----IIFFDAGTYIVTDTIQIP---AGTQIVGEVW--SVIMGTGSKFTDY-------N-NPQPV 478 (758)
T ss_dssp CHHHHHHHHHHHTTTS----EEECCSEEEEESSCEEEC---TTCEEECCSS--EEEEECSGGGCCT-------T-SCEEE
T ss_pred hHHHHHHHHHHhcCCC----EEEECCCEeEECCeEEcC---CCCEEEeccc--ceEecCCccccCC-------C-CCeee
Confidence 3577999999765543 9999999997 779996 4689999985 455554322 111 0 12245
Q ss_pred eeee----cCceEEEeeeeecCCCCCCCCCCCCceEEEEEeC-------CeeEEEceEEe
Q 039106 152 FAVN----SPYFIAKNITFKNKAPLPPSGALGKQAVAFRISA-------DTAAFTGCKFI 200 (345)
Q Consensus 152 v~V~----a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~g-------d~~~f~nC~~~ 200 (345)
|.|. ...+.+.+|.|.=..+. .-|+.|...- +.+.+.++.|.
T Consensus 479 v~VG~~gd~G~veisdl~~~t~g~~-------~gail~ewn~~~~~~~~~~~~mwDvh~R 531 (758)
T 3eqn_A 479 IQVGAPGSSGVVEITDMIFTTRGPA-------AGAIIVEWNVHDPSGQQAAAGAWDTHLI 531 (758)
T ss_dssp EEESCTTCBSCEEEESCEEEECSCC-------TTEEEEEECCBCCTTCTTCEEEESCBEE
T ss_pred EEeCCCCCCCeEEEEeEEEEecCCC-------CCcEEEEEcCCCCCCCCCCeeEEEEEEE
Confidence 5552 23689999999733221 2355555532 45778888887
No 45
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=77.26 E-value=12 Score=36.90 Aligned_cols=87 Identities=13% Similarity=0.120 Sum_probs=58.0
Q ss_pred EEEEEeCCeeEEEceEEe---ce---------eeeEeccceeEEeeeEEEEeeCCCCeeEeec-----cCCCCCcceeEE
Q 039106 183 VAFRISADTAAFTGCKFI---GS---------VDFIFGNGLSFYEDCHLHAITNSYGALTAQK-----RGSLLEETGFSF 245 (345)
Q Consensus 183 vAl~v~gd~~~f~nC~~~---G~---------VDFIfG~~~a~f~~c~i~~~~~~~g~ItA~~-----r~~~~~~~G~vf 245 (345)
..+.+.++....+|..|. |. |-+-...-.+.|.+|.|.... -.+.+.. +..+....--.|
T Consensus 194 AT~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G~Q---DTLy~~~~~~~~~~~~d~~gRqyy 270 (422)
T 3grh_A 194 AVFWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILGRQ---NTFFVTNSGVQNRLETNRQPRTLV 270 (422)
T ss_dssp CSEEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEECST---TCEEECCCCTTCSCCSSCCCEEEE
T ss_pred EEEEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEeec---ceeeeccccccccccccccccEEE
Confidence 457788999999999997 31 333334456899999998642 3444422 111122334578
Q ss_pred EccEEeecccEEeeecccccceEEEEcccCCc
Q 039106 246 VKCKVTGSGALYLGRAWGTFSRVVFAYTYMDK 277 (345)
Q Consensus 246 ~nc~it~~g~~yLGRpW~~~srvvf~~t~~~~ 277 (345)
.+|.|.|+-..-+|+ +.++|.+|.|-.
T Consensus 271 ~~CyIeGtVDFIFG~-----a~AvFe~C~I~s 297 (422)
T 3grh_A 271 TNSYIEGDVDIVSGR-----GAVVFDNTEFRV 297 (422)
T ss_dssp ESCEEEESEEEEEES-----SEEEEESCEEEE
T ss_pred EecEEeccccEEccC-----ceEEEEeeEEEE
Confidence 999999987777774 678888888754
No 46
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=69.87 E-value=14 Score=35.88 Aligned_cols=43 Identities=12% Similarity=0.065 Sum_probs=25.1
Q ss_pred eeeeecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeC--CeeEEEceEEeceee
Q 039106 151 TFAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISA--DTAAFTGCKFIGSVD 204 (345)
Q Consensus 151 Tv~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~g--d~~~f~nC~~~G~VD 204 (345)
-|.|.+++.+++|++|.+... ..|++.+ .+..+.+|.+.+..|
T Consensus 131 GI~v~gs~~~i~n~~i~~n~~-----------~GI~l~~~~s~n~I~nn~i~~N~d 175 (400)
T 1ru4_A 131 GAYVIGSHNTFENTAFHHNRN-----------TGLEINNGGSYNTVINSDAYRNYD 175 (400)
T ss_dssp SEEECSSSCEEESCEEESCSS-----------CSEEECTTCCSCEEESCEEECCCC
T ss_pred cEEEeCCCcEEEeEEEECCCc-----------eeEEEEcccCCeEEEceEEEcccC
Confidence 355667777777777775531 1233332 256677777775554
No 47
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=66.12 E-value=1.2e+02 Score=30.91 Aligned_cols=85 Identities=6% Similarity=-0.078 Sum_probs=51.1
Q ss_pred ecCce--EEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEeceeeeE-eccceeEEeeeEEEEeeCCCCe-eE
Q 039106 155 NSPYF--IAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFIGSVDFI-FGNGLSFYEDCHLHAITNSYGA-LT 230 (345)
Q Consensus 155 ~a~~f--~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~G~VDFI-fG~~~a~f~~c~i~~~~~~~g~-It 230 (345)
..+++ +++|+++.+..+.. .-++.+. ....+.||.|.-.-|-| .+.-...++||++..-. ++. |.
T Consensus 354 ~c~nV~~~I~nv~i~~~~~~n--------TDGIDi~-~NV~I~nc~I~~gDDcIaIks~NI~I~nc~i~~g~--g~g~Is 422 (574)
T 1ogo_X 354 GNSGISSQISDYKQVGAFFFQ--------TDGPEIY-PNSVVHDVFWHVNDDAIKIYYSGASVSRATIWKCH--NDPIIQ 422 (574)
T ss_dssp SSSCEEEEEEEEEEECCCSTT--------CCCCBCC-TTCEEEEEEEEESSCSEECCSTTCEEEEEEEEECS--SSCSEE
T ss_pred CCCChhhEEEeeEeeCCCCCC--------CccCccc-CCEEEEeeEEECCCCEEEECCccEEEEeEEEECCC--CCceEE
Confidence 46778 99999987643221 1124445 77888888888223333 23356778888887632 233 43
Q ss_pred eeccCCCCCcceeEEEccEEee
Q 039106 231 AQKRGSLLEETGFSFVKCKVTG 252 (345)
Q Consensus 231 A~~r~~~~~~~G~vf~nc~it~ 252 (345)
- +. +...-..+.|.||+|..
T Consensus 423 I-GS-~~g~V~NV~v~N~~i~~ 442 (574)
T 1ogo_X 423 M-GW-TSRDISGVTIDTLNVIH 442 (574)
T ss_dssp C-CS-SCCCEEEEEEEEEEEEE
T ss_pred E-cC-CCCcEEEEEEEeEEEEC
Confidence 3 22 23345667888888865
No 48
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=65.98 E-value=17 Score=34.83 Aligned_cols=20 Identities=25% Similarity=0.371 Sum_probs=14.5
Q ss_pred eeeee-cCceEEEeeeeecCC
Q 039106 151 TFAVN-SPYFIAKNITFKNKA 170 (345)
Q Consensus 151 Tv~V~-a~~f~a~nitf~Nt~ 170 (345)
.|.+. .+++.++||+|+|+.
T Consensus 153 ~i~~~~~~nv~I~~iti~nsp 173 (376)
T 1bhe_A 153 LIQINKSKNFTLYNVSLINSP 173 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCS
T ss_pred EEEEEcceEEEEEeEEEECCC
Confidence 44444 667888888888874
No 49
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=60.41 E-value=33 Score=32.35 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=63.5
Q ss_pred ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCe-eEEEceEEece-------------eeeEeccceeEEeeeEEE
Q 039106 155 NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADT-AAFTGCKFIGS-------------VDFIFGNGLSFYEDCHLH 220 (345)
Q Consensus 155 ~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~-~~f~nC~~~G~-------------VDFIfG~~~a~f~~c~i~ 220 (345)
..+ +.+++|+++|+.. ..+-+ ...+. ..+.+|.|... +|. ..-..++++|.|.
T Consensus 104 ~~~-v~i~giti~nsp~---------~~i~i-~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi--~s~nV~I~n~~i~ 170 (335)
T 1k5c_A 104 KGS-GTYKKFEVLNSPA---------QAISV-GPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV--SANNVTIQNCIVK 170 (335)
T ss_dssp EEE-EEEESCEEESCSS---------CCEEE-EEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE--ECSSEEEESCEEE
T ss_pred ceE-EEEEEEEEECCCc---------ceEEE-EccCCeEEEEEEEEECCCCcccccCCCCCeEcc--cCCeEEEEeeEEE
Confidence 345 8999999999852 22222 23455 88888888832 454 5567888999887
Q ss_pred EeeCCCCeeEeeccCCCCCcceeEEEccEEeecccEEeeec--ccccceEEEEcccCCcc
Q 039106 221 AITNSYGALTAQKRGSLLEETGFSFVKCKVTGSGALYLGRA--WGTFSRVVFAYTYMDKI 278 (345)
Q Consensus 221 ~~~~~~g~ItA~~r~~~~~~~G~vf~nc~it~~g~~yLGRp--W~~~srvvf~~t~~~~~ 278 (345)
.-.+ +.-.-.+ .-++|.||.+.+.-...+|-- -..-..+.|.+|.|.+.
T Consensus 171 ~gDD--cIaiksg-------~nI~i~n~~~~~ghGisIGS~g~~~~v~nV~v~n~~~~~t 221 (335)
T 1k5c_A 171 NQDD--CIAINDG-------NNIRFENNQCSGGHGISIGSIATGKHVSNVVIKGNTVTRS 221 (335)
T ss_dssp SSSC--SEEEEEE-------EEEEEESCEEESSCCEEEEEECTTCEEEEEEEESCEEEEE
T ss_pred cCCC--EEEeeCC-------eeEEEEEEEEECCccCeEeeccCCCCEEEEEEEeeEEECC
Confidence 5322 3222222 457889998886433555532 34456777777777664
No 50
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=57.11 E-value=60 Score=30.89 Aligned_cols=35 Identities=17% Similarity=0.161 Sum_probs=20.7
Q ss_pred ecCceEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEe
Q 039106 155 NSPYFIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFI 200 (345)
Q Consensus 155 ~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~ 200 (345)
..+++.++||+++|+.. ..+-+. .+...+.||.|.
T Consensus 133 ~~~nv~i~~iti~nsp~---------~~i~i~--~~nv~i~~~~I~ 167 (362)
T 1czf_A 133 GLDSSSITGLNIKNTPL---------MAFSVQ--ANDITFTDVTIN 167 (362)
T ss_dssp EEETEEEESCEEECCSS---------CCEEEE--CSSEEEESCEEE
T ss_pred ecccEEEEEEEEecCCc---------cEEEEe--eCCEEEEEEEEE
Confidence 35677888888887742 223333 555666666665
No 51
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=49.26 E-value=45 Score=33.55 Aligned_cols=45 Identities=11% Similarity=0.156 Sum_probs=32.8
Q ss_pred ceeeeecCceEEEeeeeecCCCCCCCCCCCCceEEEE-------EeCCeeEEEceEEece
Q 039106 150 ATFAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFR-------ISADTAAFTGCKFIGS 202 (345)
Q Consensus 150 ATv~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~-------v~gd~~~f~nC~~~G~ 202 (345)
+.+.|.|++.+++|..|+|.... +.+.+. +.+.+..+.+|.|.|.
T Consensus 119 ~~iav~G~~~~I~nn~I~~~~~g--------d~i~i~~~~~~~~l~g~~n~I~~N~I~Gk 170 (506)
T 1dbg_A 119 GLVAIYGSYNRITACVFDCFDEA--------NSAYITTSLTEDGKVPQHCRIDHCSFTDK 170 (506)
T ss_dssp CSEEECSSSCEEESCEEESCCSS--------CSCSEEECCCTTCCCCCSCEEESCEEECC
T ss_pred cceEEecCCeEEEeeEEEcCCCC--------ceeeEeecccceeeeccccEEECcEEECC
Confidence 45678889999999999987521 113333 4677888999999964
No 52
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=47.53 E-value=1e+02 Score=29.11 Aligned_cols=20 Identities=20% Similarity=0.220 Sum_probs=14.6
Q ss_pred eeee-e--cCceEEEeeeeecCC
Q 039106 151 TFAV-N--SPYFIAKNITFKNKA 170 (345)
Q Consensus 151 Tv~V-~--a~~f~a~nitf~Nt~ 170 (345)
.|.+ . .+++.+++|+|+|+.
T Consensus 104 ~i~~~~~~~~nv~I~giti~nsp 126 (349)
T 1hg8_A 104 HFIVVQKTTGNSKITNLNIQNWP 126 (349)
T ss_dssp EEEEEEEEESSEEEESCEEECCS
T ss_pred EEEEeecCcCcEEEEEEEEEcCC
Confidence 5556 4 447888888888874
No 53
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=45.87 E-value=1.1e+02 Score=28.73 Aligned_cols=54 Identities=17% Similarity=0.128 Sum_probs=27.3
Q ss_pred ceEEEEecCCCceEEecCCCcccCCCCCCCCCCcccceeee-ecCceEEEeeeeecCC
Q 039106 114 AYITMIGAGADNTVIEWDDTADRMGQSGRPLGTYASATFAV-NSPYFIAKNITFKNKA 170 (345)
Q Consensus 114 ~~ItL~G~g~~~tiI~~~~~~~~~~~~G~~~gt~~sATv~V-~a~~f~a~nitf~Nt~ 170 (345)
.+|+|.|.+. -+|.++...-- ...+...+..+...|.+ .++++.+++|+|+|+.
T Consensus 68 ~nv~I~G~~g--G~IdG~G~~~w-~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp 122 (339)
T 2iq7_A 68 TNININGASG--HSIDCQGSRWW-DSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP 122 (339)
T ss_dssp ESCEEEECTT--CEEECCGGGTC-CSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS
T ss_pred ccEEEEcCCC--CEEECCccccc-ccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC
Confidence 5688888741 25655432100 00000001112234444 4678888999998874
No 54
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=45.45 E-value=1.2e+02 Score=29.49 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=18.9
Q ss_pred ceeEEEccEEeecc-cEEeeeccc---ccceEEEEcccCCcc
Q 039106 241 TGFSFVKCKVTGSG-ALYLGRAWG---TFSRVVFAYTYMDKI 278 (345)
Q Consensus 241 ~G~vf~nc~it~~g-~~yLGRpW~---~~srvvf~~t~~~~~ 278 (345)
....|.||++.... ...+- .|+ ....+.|.|-.|.+.
T Consensus 234 ~nV~v~n~~~~~~~~Gi~Ik-t~~g~G~v~nI~~~NI~~~~v 274 (422)
T 1rmg_A 234 TDIVYRNVYTWSSNQMYMIK-SNGGSGTVSNVLLENFIGHGN 274 (422)
T ss_dssp EEEEEEEEEEESSSCSEEEE-EBBCCEEEEEEEEEEEEEEEE
T ss_pred EEEEEEeEEEeccceEEEEE-ecCCCcEEEEEEEEeEEEECc
Confidence 34578888887642 12221 122 234556666666554
No 55
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=44.70 E-value=1.2e+02 Score=28.40 Aligned_cols=119 Identities=13% Similarity=0.155 Sum_probs=66.0
Q ss_pred eeeecCceEEEeeeeecCCCCCCCCCCCCceEEEEEe-CCeeEEEceEEeceee-eEecc-ceeEEeeeEEEEeeCCCCe
Q 039106 152 FAVNSPYFIAKNITFKNKAPLPPSGALGKQAVAFRIS-ADTAAFTGCKFIGSVD-FIFGN-GLSFYEDCHLHAITNSYGA 228 (345)
Q Consensus 152 v~V~a~~f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~-gd~~~f~nC~~~G~VD-FIfG~-~~a~f~~c~i~~~~~~~g~ 228 (345)
+.+.++++.++|++|.+..+.... .+-.-++.+. .....+.||.|.-.-| .-++. ...++++|.+.. ..|
T Consensus 126 i~i~~~nv~i~~~~I~~~~~d~~~---~~ntDGidi~~s~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~---ghG- 198 (336)
T 1nhc_A 126 ISVQATNVHLNDFTIDNSDGDDNG---GHNTDGFDISESTGVYISGATVKNQDDCIAINSGESISFTGGTCSG---GHG- 198 (336)
T ss_dssp EEEEEEEEEEESCEEECTTHHHHT---CCSCCSEEECSCEEEEEESCEEESSSEEEEESSEEEEEEESCEEES---SSE-
T ss_pred EEEEeCCEEEEEEEEECCCccccc---CCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEEC---CcC-
Confidence 444478899999999987421000 0011135554 4677889999872222 22233 356778887753 123
Q ss_pred eEeec--cCCCCCcceeEEEccEEeecc-----cEEeeecccccceEEEEcccCCcc
Q 039106 229 LTAQK--RGSLLEETGFSFVKCKVTGSG-----ALYLGRAWGTFSRVVFAYTYMDKI 278 (345)
Q Consensus 229 ItA~~--r~~~~~~~G~vf~nc~it~~g-----~~yLGRpW~~~srvvf~~t~~~~~ 278 (345)
|.--+ ......-....|.||++.+.. +++-|| -+....++|.+-.|.++
T Consensus 199 isiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g~-~G~v~nI~~~ni~~~~v 254 (336)
T 1nhc_A 199 LSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYKE-TGDVSEITYSNIQLSGI 254 (336)
T ss_dssp EEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETTC-CCEEEEEEEEEEEEEEE
T ss_pred ceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECCC-CCEEeeeEEeeEEeecc
Confidence 43322 112233466789999998753 333333 13356677777777664
No 56
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=41.97 E-value=1.3e+02 Score=28.12 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=14.6
Q ss_pred eeee-ecCceEEEeeeeecCC
Q 039106 151 TFAV-NSPYFIAKNITFKNKA 170 (345)
Q Consensus 151 Tv~V-~a~~f~a~nitf~Nt~ 170 (345)
.|.+ ..+++.+++|+|+|+.
T Consensus 106 ~i~~~~~~nv~i~~i~i~nsp 126 (339)
T 1ia5_A 106 FFAAHSLTNSVISGLKIVNSP 126 (339)
T ss_dssp CEEEEEEEEEEEESCEEECCS
T ss_pred EEEEeecCcEEEEEEEEEcCC
Confidence 4444 4677888888888874
No 57
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=30.47 E-value=2.2e+02 Score=29.22 Aligned_cols=99 Identities=8% Similarity=0.020 Sum_probs=50.3
Q ss_pred ceeeeecCceEEEeeeeecCCCCCC----CC---CCCCceEEEEEeCCeeEEEceEEece-eee--EeccceeEEeeeEE
Q 039106 150 ATFAVNSPYFIAKNITFKNKAPLPP----SG---ALGKQAVAFRISADTAAFTGCKFIGS-VDF--IFGNGLSFYEDCHL 219 (345)
Q Consensus 150 ATv~V~a~~f~a~nitf~Nt~~~~~----~g---~~~~QAvAl~v~gd~~~f~nC~~~G~-VDF--IfG~~~a~f~~c~i 219 (345)
.......+++.++||+|+|+..... +. ......+.+.+......+.||.|.++ -|= |-+....+++||.+
T Consensus 136 lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~ 215 (609)
T 3gq8_A 136 NLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYS 215 (609)
T ss_dssp SEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEE
T ss_pred EEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEE
Confidence 4456677789999999998864200 00 00001111111235677888888531 121 22334567788888
Q ss_pred EEee--CCCCeeEeeccCCCCCcceeEEEccEEeec
Q 039106 220 HAIT--NSYGALTAQKRGSLLEETGFSFVKCKVTGS 253 (345)
Q Consensus 220 ~~~~--~~~g~ItA~~r~~~~~~~G~vf~nc~it~~ 253 (345)
+.-. ...+.|.--+ ......|.||++.+.
T Consensus 216 ~gp~G~S~~~GIsIGs-----gs~NVtV~Nc~i~nt 246 (609)
T 3gq8_A 216 HDPRLTANCNGFEIDD-----GSRHVVLSNNRSKGC 246 (609)
T ss_dssp ECCSSCSSCCSEEECT-----TCEEEEEESEEEESS
T ss_pred ECCCCCCCcccEEccC-----CcccEEEEeeEEECC
Confidence 5321 0112232211 125677888888765
No 58
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=27.21 E-value=1.1e+02 Score=31.31 Aligned_cols=60 Identities=12% Similarity=0.024 Sum_probs=36.8
Q ss_pred CeeEEEceEEeceeee-Eecc------ceeEEeeeEEEEeeCCCCe-e-EeeccCCCCCcceeEEEccEEeec
Q 039106 190 DTAAFTGCKFIGSVDF-IFGN------GLSFYEDCHLHAITNSYGA-L-TAQKRGSLLEETGFSFVKCKVTGS 253 (345)
Q Consensus 190 d~~~f~nC~~~G~VDF-IfG~------~~a~f~~c~i~~~~~~~g~-I-tA~~r~~~~~~~G~vf~nc~it~~ 253 (345)
....+.||.+.+.-+. ++|. -...|+||.+.... .|. | +.++|. ..-..+.|.|+++...
T Consensus 422 ~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~--~GirIKt~~g~g--G~v~nI~~~ni~m~~v 490 (608)
T 2uvf_A 422 KGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTD--IGLRAKSTSTIG--GGARNVTFRNNAMRDL 490 (608)
T ss_dssp EEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCS--EEEEEEEETTTC--CEEEEEEEEEEEEEEE
T ss_pred cCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCC--ceEEEeeecCCC--ceEECcEEEeeEEEcc
Confidence 3567899999854443 4676 34789999987521 121 2 333332 2245667999988764
No 59
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=27.05 E-value=2.2e+02 Score=28.65 Aligned_cols=84 Identities=5% Similarity=-0.099 Sum_probs=53.6
Q ss_pred Cc--eEEEeeeeecCCCCCCCCCCCCceEEEEEeCCeeEEEceEEeceeeeE-eccceeEEeeeEEEEeeCCCCe-eEee
Q 039106 157 PY--FIAKNITFKNKAPLPPSGALGKQAVAFRISADTAAFTGCKFIGSVDFI-FGNGLSFYEDCHLHAITNSYGA-LTAQ 232 (345)
Q Consensus 157 ~~--f~a~nitf~Nt~~~~~~g~~~~QAvAl~v~gd~~~f~nC~~~G~VDFI-fG~~~a~f~~c~i~~~~~~~g~-ItA~ 232 (345)
++ ++++|+++.+..+. +.-++.+. ....+.||.|.=.-|-| .+.....++||++..-. .+. |+-
T Consensus 318 ~ni~V~I~n~~i~~~~~~--------NTDGidi~-~nV~I~n~~i~~gDDcIaIks~NI~I~n~~~~~~~--g~~~Isi- 385 (549)
T 1x0c_A 318 DLITCRVDDYKQVGAFYG--------QTDGLEMY-PGTILQDVFYHTDDDGLKMYYSNVTARNIVMWKES--VAPVVEF- 385 (549)
T ss_dssp GGEEEEEEEEEEECCCBT--------TCCCCBCC-TTCEEEEEEEEESSCCEECCSSSEEEEEEEEEECS--SSCSEEC-
T ss_pred CCCeEEEEeeEeEcCCCC--------CCCccccc-CCEEEEeeEEeCCCCEEEECCCCEEEEeeEEEcCC--CCceEEE-
Confidence 47 89999998764321 11234445 88899999999333444 23357889999997532 233 543
Q ss_pred ccCCCCCcceeEEEccEEeec
Q 039106 233 KRGSLLEETGFSFVKCKVTGS 253 (345)
Q Consensus 233 ~r~~~~~~~G~vf~nc~it~~ 253 (345)
+. +...-....|.||+|...
T Consensus 386 Gs-~~~~V~NV~v~n~~i~~s 405 (549)
T 1x0c_A 386 GW-TPRNTENVLFDNVDVIHQ 405 (549)
T ss_dssp CB-SCCCEEEEEEEEEEEEEC
T ss_pred CC-CCCcEEEEEEEeeEEECc
Confidence 33 234456788999999764
No 60
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=24.92 E-value=3.4e+02 Score=28.73 Aligned_cols=99 Identities=8% Similarity=0.020 Sum_probs=52.3
Q ss_pred ceeeeecCceEEEeeeeecCCCCCC----CC---CCCCceEEEEEeCCeeEEEceEEece-eee--EeccceeEEeeeEE
Q 039106 150 ATFAVNSPYFIAKNITFKNKAPLPP----SG---ALGKQAVAFRISADTAAFTGCKFIGS-VDF--IFGNGLSFYEDCHL 219 (345)
Q Consensus 150 ATv~V~a~~f~a~nitf~Nt~~~~~----~g---~~~~QAvAl~v~gd~~~f~nC~~~G~-VDF--IfG~~~a~f~~c~i 219 (345)
.......+++.++||+|+|+..... +. ......+.+.+......+.||.|.++ -|= |-+....+++||.+
T Consensus 136 lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c 215 (772)
T 3gqn_A 136 NLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYS 215 (772)
T ss_dssp SEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEE
T ss_pred EEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEE
Confidence 4456677789999999999864200 00 00001111112235677888988532 122 22335667888888
Q ss_pred EEee--CCCCeeEeeccCCCCCcceeEEEccEEeec
Q 039106 220 HAIT--NSYGALTAQKRGSLLEETGFSFVKCKVTGS 253 (345)
Q Consensus 220 ~~~~--~~~g~ItA~~r~~~~~~~G~vf~nc~it~~ 253 (345)
+.-. ...+.|.--+ ......|.||+|.+.
T Consensus 216 ~gphG~S~~~GIsIGs-----gs~NVtV~Nc~~~nT 246 (772)
T 3gqn_A 216 HDPRLTANCNGFEIDD-----GSRHVVLSNNRSKGC 246 (772)
T ss_dssp ECCSSSSSCCSEEECT-----TCEEEEEEEEEEESS
T ss_pred ECCCCCCCcccEEecC-----CcccEEEEceEEECC
Confidence 5321 0112232211 126778888888865
No 61
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=23.00 E-value=4.7e+02 Score=24.70 Aligned_cols=85 Identities=16% Similarity=0.203 Sum_probs=54.2
Q ss_pred EEE--eCCeeEEEceEEece-------ee--eEeccceeEEeeeEEEEeeCCCCeeEeeccCCCCCcceeEEEccEEeec
Q 039106 185 FRI--SADTAAFTGCKFIGS-------VD--FIFGNGLSFYEDCHLHAITNSYGALTAQKRGSLLEETGFSFVKCKVTGS 253 (345)
Q Consensus 185 l~v--~gd~~~f~nC~~~G~-------VD--FIfG~~~a~f~~c~i~~~~~~~g~ItA~~r~~~~~~~G~vf~nc~it~~ 253 (345)
|++ .++..+++|.+|... -| .|.|.-..|++.|+|....+ +.+.. + ......+.+.+|.|.+.
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d--~~~~~-g---~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGR--QHYVL-G---TSADNRVSLTNNYIDGV 199 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESS--CSEEE-C---CCTTCEEEEESCEEECB
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCC--CcEEe-c---ccCcceEEEECcEecCC
Confidence 666 467888899998831 14 45556679999999986543 44432 1 12345789999999853
Q ss_pred c------------cEEeeecccccceEEEEcccCCcc
Q 039106 254 G------------ALYLGRAWGTFSRVVFAYTYMDKI 278 (345)
Q Consensus 254 g------------~~yLGRpW~~~srvvf~~t~~~~~ 278 (345)
. ++.|. +...++.|.+.++..+
T Consensus 200 ~~~s~~~~G~h~~~~~L~---G~sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 200 SDYSATCDGYHYWAIYLD---GDADLVTMKGNYIYHT 233 (359)
T ss_dssp CSCBTTSSSBBSCCEEEC---CSSCEEEEESCEEESB
T ss_pred cccccccCccccceEEEE---ecCCCeEEEceEeecC
Confidence 2 23332 1234788888777643
Done!