BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039109
         (233 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q32RI3|NDHK_ZYGCR NAD(P)H-quinone oxidoreductase subunit K, chloroplastic OS=Zygnema
           circumcarinatum GN=ndhK PE=3 SV=1
          Length = 255

 Score = 35.4 bits (80), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 7/71 (9%)

Query: 47  HKCKKLFLIEAEEGDEPKEH--EKEKDVTQETPAISLHALARVQSPQTMRLQSSISKASL 104
           H+C   F +       P  H  E E+++T++ P+ISL +   +QSP    LQSS    S 
Sbjct: 176 HRC---FSVTHRLQPVPAVHNGEYERNITRQVPSISLDS--TLQSPFEQILQSSFESVSE 230

Query: 105 TILIDSGSTHN 115
           T LIDS    N
Sbjct: 231 TTLIDSQRYDN 241


>sp|Q6PA90|LRG2A_XENLA Glycosyltransferase-like protein LARGE2-A OS=Xenopus laevis
           GN=gyltl1b-a PE=2 SV=1
          Length = 723

 Score = 32.0 bits (71), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 70  KDVTQETPAISLHALARVQSPQTMRLQSSI--SKASLTILIDSGSTHNFLHHKFAK 123
           K + Q+ PA S  AL  V + +T+R + S   SKA L  ++D+G+ + F +H + K
Sbjct: 545 KSIAQQDPAGSPRALI-VPAFETLRYRLSFPKSKADLLSMLDTGALYTFRYHVWEK 599


>sp|Q9V3Q6|M3K7_DROME Mitogen-activated protein kinase kinase kinase 7 OS=Drosophila
           melanogaster GN=Tak1 PE=2 SV=1
          Length = 678

 Score = 31.6 bits (70), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 36  LRTDVQKYTFGHKCKKLFLIEAEEGDEPKEHEKEKDVTQETPAISLHALARVQSPQTMRL 95
           LR  V   ++G  CK ++  +     E     ++KD+ +E     +  L+RV+ P  + L
Sbjct: 21  LREKVGHGSYGVVCKAVWRDKLVAVKEFFASAEQKDIEKE-----VKQLSRVKHPNIIAL 75

Query: 96  QSSISKASLTILI----DSGSTHNFLHHK 120
               S    T LI    + GS HNFLH K
Sbjct: 76  HGISSYQQATYLIMEFAEGGSLHNFLHGK 104


>sp|Q9M129|WTR30_ARATH WAT1-related protein At4g01450 OS=Arabidopsis thaliana GN=At4g01450
           PE=2 SV=1
          Length = 361

 Score = 31.6 bits (70), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 143 EKLTSPGRCKGVQLQLQGTQIEAYFYLLSLEGCDAVLG-AQW-----LCTLGSILWDFDK 196
            KLT    C+     L G  +  YFYLL L    A LG A W     L  + ++++ F+K
Sbjct: 66  PKLTLSISCQLFVSALFGASLMQYFYLLGLSYTSATLGSAFWAIMPSLTFVMALIFGFEK 125

Query: 197 MEMQFTKDGHQVTL 210
           + ++ TK G+ V L
Sbjct: 126 LSLK-TKIGYGVVL 138


>sp|Q6NZN0|RBM26_MOUSE RNA-binding protein 26 OS=Mus musculus GN=Rbm26 PE=1 SV=2
          Length = 1012

 Score = 31.2 bits (69), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 11/93 (11%)

Query: 69  EKDVTQETPAISLHALARVQSPQTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLK 128
           +K ++  TPA+  +  A+ +  + ++LQ  + K    IL     T   L  K  K   +K
Sbjct: 713 QKTLSVSTPAVDNNE-AQKKKQEALKLQQDVRKRKQEILEKHIETQKMLISKLEKNKTMK 771

Query: 129 SEPGC----LLSVVVANGEKL------TSPGRC 151
           SE        L ++  N  KL      TSPGRC
Sbjct: 772 SEDKAEIMKTLEILTKNITKLKDEVKSTSPGRC 804


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.132    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,788,909
Number of Sequences: 539616
Number of extensions: 3135189
Number of successful extensions: 8240
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 8237
Number of HSP's gapped (non-prelim): 10
length of query: 233
length of database: 191,569,459
effective HSP length: 114
effective length of query: 119
effective length of database: 130,053,235
effective search space: 15476334965
effective search space used: 15476334965
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)