Query         039109
Match_columns 233
No_of_seqs    228 out of 1061
Neff          8.1 
Searched_HMMs 13730
Date          Mon Mar 25 10:25:43 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039109.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039109hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2fmba_ b.50.1.1 (A:) EIAV pro  98.8 1.4E-08   1E-12   72.1  10.2   93   92-189     8-100 (104)
  2 d4fiva_ b.50.1.1 (A:) Feline i  98.1 6.8E-06 4.9E-10   58.6   9.3   91   92-189    10-109 (113)
  3 d1nsoa_ b.50.1.1 (A:) Mason-Pf  97.9 1.1E-05   8E-10   57.0   6.5   92   94-189    11-103 (107)
  4 d2nmza1 b.50.1.1 (A:1-99) Huma  97.8 0.00014   1E-08   49.5  10.1   92   92-194     8-99  (99)
  5 d1hvca_ b.50.1.1 (A:) Human im  97.7 7.1E-05 5.2E-09   57.2   8.6   93   92-195     8-100 (203)
  6 d3ecga1 b.50.1.1 (A:1-99) Huma  97.6  0.0006 4.4E-08   46.2  11.1   90   93-193     9-98  (99)
  7 d2rspa_ b.50.1.1 (A:) Rous sar  96.9 0.00019 1.4E-08   51.6   2.3   90   97-189    25-119 (124)
  8 d1izea_ b.50.1.2 (A:) Acid pro  96.4  0.0035 2.5E-07   51.1   7.5   98  102-203   207-321 (323)
  9 d1bxoa_ b.50.1.2 (A:) Acid pro  96.3  0.0058 4.2E-07   49.6   7.9   96  103-203   207-321 (323)
 10 d1hvca_ b.50.1.1 (A:) Human im  95.7   0.054 3.9E-06   40.9  10.4   92   92-194   112-203 (203)
 11 d1oewa_ b.50.1.2 (A:) Endothia  95.6   0.013 9.7E-07   47.9   7.4   96  103-202   213-328 (330)
 12 d2pmaa1 b.50.1.3 (A:26-166) Un  95.6  0.0048 3.5E-07   45.1   3.8   43  153-196    92-136 (141)
 13 d2bjua1 b.50.1.2 (A:1-329) Pla  95.3   0.037 2.7E-06   44.5   9.1   97  102-203   207-324 (329)
 14 d1wkra_ b.50.1.2 (A:) Acid pro  94.9   0.018 1.3E-06   47.2   5.9   96  103-203   206-331 (340)
 15 d3cmsa_ b.50.1.2 (A:) Chymosin  94.8   0.031 2.3E-06   44.8   7.0   96  102-203   209-321 (323)
 16 d1miqa_ b.50.1.2 (A:) Plasmeps  94.7    0.18 1.3E-05   41.2  11.9  106   93-203   241-370 (373)
 17 d2apra_ b.50.1.2 (A:) Acid pro  94.3   0.042   3E-06   44.5   6.8   95  103-203   212-322 (325)
 18 d1am5a_ b.50.1.2 (A:) Pepsin(o  94.2   0.047 3.5E-06   43.9   6.8   97  100-203   205-322 (324)
 19 d1eaga_ b.50.1.2 (A:) Acid pro  94.0    0.03 2.2E-06   45.6   5.3   96  103-203   212-329 (342)
 20 d1hrna_ b.50.1.2 (A:) Chymosin  94.0   0.095   7E-06   42.2   8.4   96  102-203   216-335 (337)
 21 d1dpja_ b.50.1.2 (A:) Acid pro  93.9   0.053 3.9E-06   43.7   6.6   95  103-203   212-327 (329)
 22 d1j71a_ b.50.1.2 (A:) Acid pro  93.8   0.045 3.3E-06   44.7   5.9   96  103-203   212-322 (334)
 23 d3psga_ b.50.1.2 (A:) Pepsin(o  93.5   0.089 6.5E-06   43.5   7.4   95  103-203   253-368 (370)
 24 d1smra_ b.50.1.2 (A:) Chymosin  93.3   0.088 6.4E-06   42.5   6.9   97  102-203   213-333 (335)
 25 g1htr.1 b.50.1.2 (P:,B:) Pepsi  92.8    0.11 8.2E-06   42.7   7.0   96  102-203   253-370 (372)
 26 d1t6ex_ b.50.1.2 (X:) Xylanase  92.1    0.12 8.8E-06   42.4   6.3   28  175-203   344-371 (381)
 27 d1qdma2 b.50.1.2 (A:2-247,A:24  91.1    0.29 2.1E-05   38.9   7.4   95  100-203   213-335 (337)
 28 d1mppa_ b.50.1.2 (A:) Pepsin {  88.8    0.32 2.4E-05   39.4   6.0   36  167-203   314-349 (357)
 29 d2qp8a1 b.50.1.2 (A:60-446) be  87.1     1.1   8E-05   36.5   8.4   32  172-204   328-359 (387)
 30 g1lya.1 b.50.1.2 (A:,B:) Cathe  86.7     1.4  0.0001   34.6   8.6   95  103-203   217-336 (338)
 31 g1b5f.1 b.50.1.2 (A:,B:) Plant  86.4    0.98 7.2E-05   35.5   7.5   94  101-203   208-324 (326)
 32 d1wkra_ b.50.1.2 (A:) Acid pro  72.0     2.6 0.00019   33.3   5.4   85   93-183    14-109 (340)
 33 d3psga_ b.50.1.2 (A:) Pepsin(o  65.1     5.4  0.0004   32.0   6.1   90   92-184    57-170 (370)
 34 d1bxoa_ b.50.1.2 (A:) Acid pro  59.0     3.5 0.00026   32.1   3.6   90   92-183    16-126 (323)
 35 d1izea_ b.50.1.2 (A:) Acid pro  58.3     3.7 0.00027   32.0   3.7   89   93-183    17-126 (323)
 36 d1yqba1 d.15.1.1 (A:15-98) Ubi  47.7      15  0.0011   22.8   4.7   41   89-129     4-44  (84)
 37 d1smra_ b.50.1.2 (A:) Chymosin  45.3     7.8 0.00057   30.1   3.6   89   92-183    16-129 (335)
 38 d1j8ca_ d.15.1.1 (A:) Ubiquiti  40.9      40  0.0029   21.5   6.6   44   87-130    27-70  (103)
 39 d1v5ta_ d.15.1.1 (A:) 8430435i  38.9      12 0.00087   23.6   3.1   46   86-131     1-47  (90)
 40 g1lya.1 b.50.1.2 (A:,B:) Cathe  38.5      12 0.00084   28.7   3.6   26   93-118    15-42  (338)
 41 d1j71a_ b.50.1.2 (A:) Acid pro  37.6      12 0.00088   29.2   3.6   26   92-117    13-40  (334)
 42 d2bjua1 b.50.1.2 (A:1-329) Pla  37.4      12  0.0009   28.6   3.6   28   92-119    15-44  (329)
 43 d1v86a_ d.15.1.1 (A:) hypothet  37.1      39  0.0028   21.3   5.6   43   89-131    14-56  (95)
 44 d1qdma2 b.50.1.2 (A:2-247,A:24  36.3      13 0.00098   28.3   3.7   25   93-117    17-43  (337)
 45 d1hrna_ b.50.1.2 (A:) Chymosin  35.8      13 0.00098   28.6   3.6   88   93-183    17-129 (337)
 46 d1eaga_ b.50.1.2 (A:) Acid pro  35.0      14   0.001   28.7   3.6   26   92-117    13-40  (342)
 47 d2apra_ b.50.1.2 (A:) Acid pro  34.7      15  0.0011   28.4   3.7   89   93-183    17-127 (325)
 48 d1wh3a_ d.15.1.1 (A:) 2'-5'-ol  34.5      35  0.0026   20.9   5.0   45   86-130     1-46  (87)
 49 d3cmsa_ b.50.1.2 (A:) Chymosin  34.5      15  0.0011   28.0   3.6   27   93-119    16-44  (323)
 50 d1am5a_ b.50.1.2 (A:) Pepsin(o  34.3      15  0.0011   28.1   3.6   28   92-119    13-42  (324)
 51 d1oewa_ b.50.1.2 (A:) Endothia  34.2      15  0.0011   28.6   3.6   91   93-185    17-132 (330)
 52 d1dpja_ b.50.1.2 (A:) Acid pro  34.1      15  0.0011   28.2   3.6   87   93-182    15-125 (329)
 53 d1mppa_ b.50.1.2 (A:) Pepsin {  32.9      18  0.0013   28.3   3.9   26   92-117    15-42  (357)
 54 g1b5f.1 b.50.1.2 (A:,B:) Plant  32.5      17  0.0012   27.7   3.6   26   92-117    14-41  (326)
 55 d1fc2c_ a.8.1.1 (C:) Immunoglo  31.5     8.1 0.00059   21.1   1.0   31    4-36      4-34  (44)
 56 d2qp8a1 b.50.1.2 (A:60-446) be  31.1      21  0.0015   28.2   4.2   27   93-119    16-44  (387)
 57 d1deeg_ a.8.1.1 (G:) Immunoglo  30.9      11 0.00077   21.3   1.5   30    6-37      3-32  (51)
 58 d1t3qa2 d.15.4.2 (A:7-87) Quin  30.1      57  0.0041   20.1   6.8   58   91-163     2-59  (81)
 59 g1htr.1 b.50.1.2 (P:,B:) Pepsi  28.8      20  0.0015   28.2   3.6   88   92-182    56-167 (372)
 60 d1wx8a1 d.15.1.1 (A:8-90) 4931  28.6      49  0.0036   20.0   4.8   43   88-130     6-48  (83)
 61 d1uj4a1 c.124.1.4 (A:3-131,A:2  28.3     7.6 0.00056   27.2   0.7   24  105-128    23-46  (151)
 62 d1lp1a_ a.8.1.1 (A:) Immunoglo  28.2      14   0.001   20.9   1.7   32    4-37      5-36  (55)
 63 d1wgga_ d.15.1.1 (A:) Ubiquiti  27.5      67  0.0049   20.0   5.6   46   86-131     1-47  (96)
 64 d1t2sa_ b.34.14.1 (A:) Argonau  26.5     7.7 0.00056   26.5   0.4   34    2-35      7-43  (123)
 65 d2bwfa1 d.15.1.1 (A:2-74) DSK2  23.5      68  0.0049   18.7   4.7   39   92-130     1-39  (73)
 66 d1miqa_ b.50.1.2 (A:) Plasmeps  22.2      14 0.00099   29.2   1.2   69   94-165    63-146 (373)
 67 d1lk5a1 c.124.1.4 (A:1-130,A:2  21.9      11 0.00077   26.3   0.4   25  105-129    23-47  (149)
 68 d2zeqa1 d.15.1.1 (A:1-78) Ubiq  21.0      55   0.004   19.6   3.9   38   93-130     3-41  (78)
 69 d1ip9a_ d.15.2.2 (A:) Bud emer  20.4      81  0.0059   19.3   4.7   49   88-141     8-56  (85)

No 1  
>d2fmba_ b.50.1.1 (A:) EIAV protease {Equine infectious anemia virus [TaxId: 11665]}
Probab=98.83  E-value=1.4e-08  Score=72.13  Aligned_cols=93  Identities=16%  Similarity=0.237  Sum_probs=67.9

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecceeEEEEEEEee
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQIEAYFYLLS  171 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~~~~~~Vl~  171 (233)
                      .-.+..+|+|+++.+|+||||.++.|+..-............+..+ .+.|.....  ....+.+.+.|+.....+.|.|
T Consensus         8 RP~~~i~I~Gq~v~~LLDTGAD~TVI~~~~~p~~~~~~~~~~~~~i-gg~g~~~~~--~~~~v~i~~~g~~~~~~~lV~p   84 (104)
T d2fmba_           8 RPTTIVLINDTPLNVLLDTGADTSVLTTAHYNRLKYRGRKYQGTGI-GGVGGNVET--FSTPVTIKKKGRHIKTRMLVAD   84 (104)
T ss_dssp             CCEEEEEETTEEEEEEECTTCSSCEEEHHHHHHCSSCCCCEECCCE-EETTEEECC--EEEEEEEEETTEEEEEEEEEES
T ss_pred             CeEEEEEECCEEEEEEEeCCCCeEEEcccccCccCCCCCCcceeEE-EEecceEEE--EEEEEEEEECCeEEEEEEEECC
Confidence            4456788999999999999999999999888765433323333333 344444433  2346888999999988888888


Q ss_pred             cCCCccccchhHHhhhCC
Q 039109          172 LEGCDAVLGAQWLCTLGS  189 (233)
Q Consensus       172 l~~~d~ILG~dwL~~~~~  189 (233)
                      . ..+ |||.|.|++.|.
T Consensus        85 ~-Pvn-LlGRdlL~qlG~  100 (104)
T d2fmba_          85 I-PVT-ILGRDILQDLGA  100 (104)
T ss_dssp             C-SSC-EECHHHHHHHTC
T ss_pred             C-Ccc-eecHHHHHHhCC
Confidence            3 233 999999999986


No 2  
>d4fiva_ b.50.1.1 (A:) Feline immunodeficiency virus (FIV) protease {Feline immunodeficiency virus [TaxId: 11673]}
Probab=98.15  E-value=6.8e-06  Score=58.61  Aligned_cols=91  Identities=11%  Similarity=0.169  Sum_probs=59.2

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccC-C--CceeEEEEcCCceeccCCceeceeEeecceeE-----
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSE-P--GCLLSVVVANGEKLTSPGRCKGVQLQLQGTQI-----  163 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~-~--~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~-----  163 (233)
                      .-.+..+|+|+++.+|+||||.++.|+..=     ++.. +  ..+..+. +-|+..... ...++.+++.++..     
T Consensus        10 RP~v~v~I~Gq~v~~LLDTGAD~TVi~~~d-----~p~~~~~~~~~~~~~-GIGG~~~v~-~~~~v~i~~~~~~~~gtvl   82 (113)
T d4fiva_          10 RPEILIFVNGYPIKFLLDTGADITILNRRD-----FQVKNSIENGRQNMI-GVGGGKRGT-NYINVHLEIRDENYKTQCI   82 (113)
T ss_dssp             CCEEEEEETTEEEEEEECTTCSSCEEEGGG-----CCCTTCEEEEEEEEE-CSSCEEEEE-EEEEEEEEECCTTSCCCEE
T ss_pred             CCeEEEEECCEEEEEEEcCCCCcEEEeccc-----cCCCCCCCCCCCeEE-ecCeEEeee-EEceEEEEEcCCeEeEEEE
Confidence            345667889999999999999999998643     3322 1  1122333 445544432 34467777776543     


Q ss_pred             EEEEEEeecCCCcc-ccchhHHhhhCC
Q 039109          164 EAYFYLLSLEGCDA-VLGAQWLCTLGS  189 (233)
Q Consensus       164 ~~~~~Vl~l~~~d~-ILG~dwL~~~~~  189 (233)
                      .-.+.|+|.....+ |||.|+|+++|.
T Consensus        83 ~g~~pvlp~~~~p~nllGRd~LtqlG~  109 (113)
T d4fiva_          83 FGNVCVLEDNSLIQPLLGRDNMIKFNI  109 (113)
T ss_dssp             EEEEEEETTCCCSSCEECHHHHHHTTC
T ss_pred             EccccccCCCCCcCCEEChhhhHHhCC
Confidence            34555666555543 899999999986


No 3  
>d1nsoa_ b.50.1.1 (A:) Mason-Pfizer monkey virus protease {Simian retrovirus 1, SRV-1 [TaxId: 11942]}
Probab=97.92  E-value=1.1e-05  Score=57.03  Aligned_cols=92  Identities=11%  Similarity=0.045  Sum_probs=53.3

Q ss_pred             EEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecc-eeEEEEEEEeec
Q 039109           94 RLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQG-TQIEAYFYLLSL  172 (233)
Q Consensus        94 ~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g-~~~~~~~~Vl~l  172 (233)
                      .+...|+|+++.+|+||||.++.|+..-.. ..++.  ........+-|..........-+.+.... ..-....+|++-
T Consensus        11 ~~~v~I~G~~v~~LLDTGAD~TVI~~~~~p-~~wp~--~~~~~~~~GiGg~~~~~~~~~~l~~~~~~~~~~~~~p~vv~~   87 (107)
T d1nsoa_          11 SLTLWLDDKMFTGLINTGADVTIIKLEDWP-PNWPI--TDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPN   87 (107)
T ss_dssp             CEEEEETTEEEEECCCSSCSSCBCCGGGSC-TTSCC--CCCEEEECSSSEEEECCCBCCCEEEEETTTEEEEECCBBCTT
T ss_pred             EEEEEECCEEEEeeecCCCCcEEEeccccC-CCCCc--CcCccEEEEecCeeeEEEeeeeEEEEeCCCceEEEcceECCC
Confidence            345689999999999999999999876432 22222  11222333445554443322223333322 222233245554


Q ss_pred             CCCccccchhHHhhhCC
Q 039109          173 EGCDAVLGAQWLCTLGS  189 (233)
Q Consensus       173 ~~~d~ILG~dwL~~~~~  189 (233)
                      ...+ |||.|.|+++|.
T Consensus        88 ~Pvn-llGRd~L~qlg~  103 (107)
T d1nsoa_          88 LPVN-LWGRDLLSQMKI  103 (107)
T ss_dssp             CCCC-BCCHHHHHHHHT
T ss_pred             CCcC-cccHHHHHHhCC
Confidence            4444 899999999986


No 4  
>d2nmza1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=97.79  E-value=0.00014  Score=49.53  Aligned_cols=92  Identities=12%  Similarity=0.200  Sum_probs=68.4

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecceeEEEEEEEee
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQIEAYFYLLS  171 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~~~~~~Vl~  171 (233)
                      .-.+.++|+|+...+|+||||..+.+..     ..|+-. .+|.. ..+-|+.+... .+.++.+++.|+....++.|-|
T Consensus         8 RP~vtvkIgGq~~eaLLDTGADdTVlee-----i~lpg~-WkPk~-IgGIGGfikVr-qYd~i~iei~g~k~~gtVLVgp   79 (99)
T d2nmza1           8 RPLVTIKIGGQLKEALLDTGADDTVIEE-----MSLPGR-WKPKM-IGGIGGFIKVR-QYDQIIIEIAGHKAIGTVLVGP   79 (99)
T ss_dssp             CCEEEEEETTEEEEEEECTTCSSCEEES-----CCCCSC-CEEEE-EEETTEEEEEE-EEEEEEEEETTEEEEEEEEEES
T ss_pred             CCeEEEEECCEEEEEeeccCCCceEEec-----ccCCCC-CCceE-EEeccceEEEE-EeCceEEEECCcEEEEEEEECC
Confidence            3456789999999999999999998853     556532 23333 34556666543 3568999999999998888887


Q ss_pred             cCCCccccchhHHhhhCCeEEEc
Q 039109          172 LEGCDAVLGAQWLCTLGSILWDF  194 (233)
Q Consensus       172 l~~~d~ILG~dwL~~~~~i~id~  194 (233)
                       ...+ |+|.+-|.+.|. ++||
T Consensus        80 -TPvN-IiGRN~Ltq~Gc-tLnf   99 (99)
T d2nmza1          80 -TPAN-IIGRNLLTQIGA-TLNF   99 (99)
T ss_dssp             -CSSC-EECHHHHTTTTC-EEEC
T ss_pred             -CCcc-EEcccchhhcCc-eecC
Confidence             2333 789999999998 6776


No 5  
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=97.72  E-value=7.1e-05  Score=57.25  Aligned_cols=93  Identities=13%  Similarity=0.186  Sum_probs=69.2

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecceeEEEEEEEee
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQIEAYFYLLS  171 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~~~~~~Vl~  171 (233)
                      .-.+.++|+|+.+.||+||||.++.+..     .+++- ..+|..+. +-|+.+... ...++.+.+.|+....++.|-|
T Consensus         8 RP~VtVkIgGQ~~eaLLDTGADDTVLe~-----inLpG-~WkPkiIG-GIGGfIkVr-qY~~V~IeI~gkk~~gTVLVgP   79 (203)
T d1hvca_           8 RPLVTIRIGGQLKEALLDTGADDTVLEE-----MNLPG-KWKPKMIG-GIGGFIKVR-QYDQILIEICGHKAIGTVLVGP   79 (203)
T ss_dssp             CCEEEEESSSCEEEEEECTTCSSEEEEC-----CCCSS-CEEEEEEE-ETTEEEEEE-EEEEEEEEETTEEEEEEEEEES
T ss_pred             CCeEEEEECCEEEEEEecCCCCceEEec-----ccCCC-CCcccEEE-ecCceEEEE-EeCCEEEEECCcEEEEEEEECC
Confidence            3467789999999999999999998843     45542 22333333 455555443 3468899999999999999988


Q ss_pred             cCCCccccchhHHhhhCCeEEEcc
Q 039109          172 LEGCDAVLGAQWLCTLGSILWDFD  195 (233)
Q Consensus       172 l~~~d~ILG~dwL~~~~~i~id~~  195 (233)
                       ..++ |||.|.|.+.+. +++|.
T Consensus        80 -TPvN-IIGRNlLtqlG~-tLnFp  100 (203)
T d1hvca_          80 -TPVN-IIGRNLLTQIGC-TLNFG  100 (203)
T ss_dssp             -CSSC-EECHHHHGGGTC-EEECT
T ss_pred             -CCcc-ccchhhhhhhhh-eeecc
Confidence             3333 789999999998 79883


No 6  
>d3ecga1 b.50.1.1 (A:1-99) Human immunodeficiency virus type 2 (HIV-2) protease {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=97.61  E-value=0.0006  Score=46.23  Aligned_cols=90  Identities=16%  Similarity=0.204  Sum_probs=64.8

Q ss_pred             EEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecceeEEEEEEEeec
Q 039109           93 MRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQIEAYFYLLSL  172 (233)
Q Consensus        93 ~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~~~~~~Vl~l  172 (233)
                      -.+.++|+|+...+|+||||..+.+.     ...|+- ..+|.. ..+-|+.+.... ..++++++.|+.......|=|-
T Consensus         9 P~vtvkIgGq~~eaLLDTGADdTVle-----~i~lpg-~WkPk~-iGGIGGfikVrq-Yd~i~Ieicg~k~~gtVLvgpT   80 (99)
T d3ecga1           9 PVVTAYIEGQPVEVLLDTGADDSIVA-----GIELGN-NYSPKI-VGGIGGFINTKE-YKNVEIEVLNKKVRATIMTGDT   80 (99)
T ss_dssp             CEEEEEETTEEEEEEECTTCSSCEEC-----SCCCCS-CCEEEE-EEETTEEEEEEE-EEEEEEEETTEEEEEEEEEECC
T ss_pred             CeEEEEECCEEeeeecccCCCceeee-----ccCCCC-CCcceE-EEEeeeeEEEEE-eCcEEEEECCcEEEEEEEeCCC
Confidence            35678999999999999999998883     455553 234433 345566665543 5679999999998888877442


Q ss_pred             CCCccccchhHHhhhCCeEEE
Q 039109          173 EGCDAVLGAQWLCTLGSILWD  193 (233)
Q Consensus       173 ~~~d~ILG~dwL~~~~~i~id  193 (233)
                       ..+ |+|.+.|.+.|. ++|
T Consensus        81 -PvN-IiGRNlLtqlGc-tLn   98 (99)
T d3ecga1          81 -PIN-IFGRNILTALGM-SLN   98 (99)
T ss_dssp             -SSC-EECHHHHHHTTC-EEE
T ss_pred             -Cce-EEccchhhhhCc-ccC
Confidence             222 789999999998 554


No 7  
>d2rspa_ b.50.1.1 (A:) Rous sarcoma virus protease {Rous sarcoma virus, strain pr-C [TaxId: 11886]}
Probab=96.88  E-value=0.00019  Score=51.59  Aligned_cols=90  Identities=13%  Similarity=0.111  Sum_probs=44.0

Q ss_pred             EeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCce-eccCCceeceeEeec----ceeEEEEEEEee
Q 039109           97 SSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEK-LTSPGRCKGVQLQLQ----GTQIEAYFYLLS  171 (233)
Q Consensus        97 ~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~-~~~~~~~~~~~~~i~----g~~~~~~~~Vl~  171 (233)
                      .+++|+.+.+|+||||..+.|+..-.. ..++..+..+..+....|.. .........+.+...    ++++....+|.+
T Consensus        25 ~k~~g~~i~~LLDTGAD~TVI~~~dwp-~~Wp~~~~~~~~i~GIGg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~p~V~~  103 (124)
T d2rspa_          25 VKQRSVYITALLDSGADITIISEEDWP-TDWPVMEAANPQIHGIGGGIPMRKSRDMIELGVINRDGSLERPLLLFPAVAM  103 (124)
T ss_dssp             CSCSEEEEEEEECTTCSSCEEETTTSC-TTSCEEECC---------CCCEEEESSCEEEEEECTTSCBCCCEEECCEEES
T ss_pred             EeeCCEEEEEEEcCCCCeEEEcCCccC-CCCccCCCCCCEEEEcCCceeeEEeeeeEEEeeEecCCceeeeEEEecCCCC
Confidence            456778999999999999999875422 12333222233333222211 111111112222221    123333333433


Q ss_pred             cCCCccccchhHHhhhCC
Q 039109          172 LEGCDAVLGAQWLCTLGS  189 (233)
Q Consensus       172 l~~~d~ILG~dwL~~~~~  189 (233)
                      +.  .=|+|.|-|++.|.
T Consensus       104 tP--vni~GRdiL~qlG~  119 (124)
T d2rspa_         104 VR--GSILGRDCLQGLGL  119 (124)
T ss_dssp             CS--SEEECHHHHHHTTC
T ss_pred             Cc--ccEECHhHHHHhCC
Confidence            22  23999999999997


No 8  
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=96.45  E-value=0.0035  Score=51.09  Aligned_cols=98  Identities=15%  Similarity=0.143  Sum_probs=62.4

Q ss_pred             eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCce-eccCCceeceeEeecceeEEEE--------------
Q 039109          102 ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEK-LTSPGRCKGVQLQLQGTQIEAY--------------  166 (233)
Q Consensus       102 ~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~-~~~~~~~~~~~~~i~g~~~~~~--------------  166 (233)
                      ....++||||++..++...+++.+.-....   .......+.. ..|....+.+.+.++|..+.+.              
T Consensus       207 ~~~~~ivDSGts~~~lp~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~i~f~f~g~~~~ip~~~~~~~~~~~~~C  283 (323)
T d1izea_         207 DSITGIADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQGGYVFPSSASLPDFSVTIGDYTATVPGEYISFADVGNGQT  283 (323)
T ss_dssp             CCEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEECSTTEE
T ss_pred             cCceEEeccCCccccCCHHHHHHHHHHcCC---ccccCCCCcEEeecccCCceEEEEECCEEEEcChHHEEEEeCCCCEE
Confidence            356789999999999999998876533221   1111122211 2223334567777777665542              


Q ss_pred             -EEEeecCCCc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 -FYLLSLEGCD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 -~~Vl~l~~~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                       +.+.+..+.+ .|||.+||+.+-.+ .|+++++|-|..
T Consensus       284 ~~~i~~~~~~~~~iLG~~flr~~y~v-fD~~~~~IGfA~  321 (323)
T d1izea_         284 FGGIQSNSGIGFSIFGDVFLKSQYVV-FDASGPRLGFAA  321 (323)
T ss_dssp             EESEEECTTTSSEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEEECCCCCCCEEECHHHhCCEEEE-EECCCCEEEEcc
Confidence             1122333333 59999999999874 999999998864


No 9  
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=96.27  E-value=0.0058  Score=49.64  Aligned_cols=96  Identities=15%  Similarity=0.164  Sum_probs=63.6

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcC-Cc-eeccCCceeceeEeecceeEEEE--------------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVAN-GE-KLTSPGRCKGVQLQLQGTQIEAY--------------  166 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~-G~-~~~~~~~~~~~~~~i~g~~~~~~--------------  166 (233)
                      ...++||||++..++...++.++--.....    ....+ +. ...|....+.+.+.++|..+.++              
T Consensus       207 ~~~aiiDSGTs~~~lp~~~~~~l~~~i~~~----~~~~~~~~~~~~c~~~~p~itf~f~g~~~~i~~~~~~~~~~~~~~~  282 (323)
T d1bxoa_         207 GFSGIADTGTTLLLLDDSVVSQYYSQVSGA----QQDSNAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGST  282 (323)
T ss_dssp             EEEEEECTTCSSEEECHHHHHHHHTTSTTC----EEETTTTEEEECTTCCCCCEEEEETTEEEEECHHHHEEEECSSSSC
T ss_pred             CcceEEecccccccCCHHHHHHHHHHhCCc----cccCCCCcEEEeccCCCCcEEEEECCEEEEEChHHeEEEEcCCCCE
Confidence            567999999999999999999874332211    01111 11 12344455677888888766542              


Q ss_pred             --EEEeecCCCc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 --FYLLSLEGCD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 --~~Vl~l~~~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                        +.+.+..+.+ .|||..||+.+-.+ .|+++++|-|..
T Consensus       283 C~~~i~~~~~~~~~ILG~~flr~~y~v-fD~~~~~IGfAp  321 (323)
T d1bxoa_         283 CLGGIQSNSGIGFSIFGDIFLKSQYVV-FDSDGPQLGFAP  321 (323)
T ss_dssp             EEESEEECTTCSSEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEEEECCCCCCcEEECHHHhCCEEEE-EECCCCEEeEEe
Confidence              1122333344 59999999999885 999999998864


No 10 
>d1hvca_ b.50.1.1 (A:) Human immunodeficiency virus type 1 protease {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=95.74  E-value=0.054  Score=40.89  Aligned_cols=92  Identities=13%  Similarity=0.172  Sum_probs=67.1

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecceeEEEEEEEee
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQIEAYFYLLS  171 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~~~~~~Vl~  171 (233)
                      .-.+..+|+++...||+||||..+.+.     ...|+- ..+|..+ .+-|+.+... ...+++++|-|+.......|-|
T Consensus       112 rp~vt~ki~gq~~ealldtgaddtv~e-----~~~lpg-rwkpk~i-ggiggfikvr-qy~~v~iei~g~k~~gtvlvgp  183 (203)
T d1hvca_         112 RPLVTIKIGGQLKEALLDTGADDTVLE-----EMSLPG-RWKPKMI-GGIGGFIKVR-QYDQILIEICGHKAIGTVLVGP  183 (203)
T ss_dssp             CCEEEEEETTEEEEEEECTTCSSCEEE-----SCCCSS-CCEEEEE-EETTEEEEEE-EEEEEEEEETTEEEEEEEEEEC
T ss_pred             cceEEEecchhHHHHHhcccCCceEEe-----cccCCC-CCcceEE-EEecccccee-eEccEEEEECCCEEEEEEEECC
Confidence            456788999999999999999988773     455552 2334333 3456655543 3568999999999888887776


Q ss_pred             cCCCccccchhHHhhhCCeEEEc
Q 039109          172 LEGCDAVLGAQWLCTLGSILWDF  194 (233)
Q Consensus       172 l~~~d~ILG~dwL~~~~~i~id~  194 (233)
                      - ..+ |+|.+.|.+.|. +.||
T Consensus       184 t-p~n-iigrn~ltq~g~-tlnf  203 (203)
T d1hvca_         184 T-PVN-IIGRNLLTQIGC-TLNF  203 (203)
T ss_dssp             C-SSC-EECHHHHTTTTC-EEEC
T ss_pred             C-Cce-EEcccchhhcCc-cccC
Confidence            2 222 789999999998 6776


No 11 
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=95.64  E-value=0.013  Score=47.93  Aligned_cols=96  Identities=13%  Similarity=0.141  Sum_probs=61.0

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCc-eeccCCceeceeEeecceeEEEE---------------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGE-KLTSPGRCKGVQLQLQGTQIEAY---------------  166 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~-~~~~~~~~~~~~~~i~g~~~~~~---------------  166 (233)
                      ...++||||++..++...+++.+--.....   .-..-+|. .+.|....+.+.+.++|..+.+.               
T Consensus       213 ~~~~iiDSGts~~~lp~~~~~~i~~~~~~~---~~~~~~~~~~~~C~~~~P~i~f~f~g~~~~lp~~~~~~~~~~~~~~~  289 (330)
T d1oewa_         213 SIDGIADTGTTLLYLPATVVSAYWAQVSGA---KSSSSVGGYVFPCSATLPSFTFGVGSARIVIPGDYIDFGPISTGSSS  289 (330)
T ss_dssp             EEEEEECTTCCSEEECHHHHHHHHTTSTTC---EEETTTTEEEEETTCCCCCEEEEETTEEEEECHHHHEEEESSTTCSE
T ss_pred             CcceeeccccccccCCHHHHHHHHHHccCc---ccCcccceEEecccCCCCcEEEEECCEEEecCHHHeeEEEecCCCCE
Confidence            467899999999999999998874332110   11111122 23455556678888888766642               


Q ss_pred             EE--EeecCCCc-cccchhHHhhhCCeEEEc-cccEEEEE
Q 039109          167 FY--LLSLEGCD-AVLGAQWLCTLGSILWDF-DKMEMQFT  202 (233)
Q Consensus       167 ~~--Vl~l~~~d-~ILG~dwL~~~~~i~id~-~~~~~~f~  202 (233)
                      +.  +.+..+.+ .|||.+||+.+-.+ .|+ ++.+|-|.
T Consensus       290 C~~~i~~~~~~~~~ILG~~flr~~y~v-fD~~~~~~IGfA  328 (330)
T d1oewa_         290 CFGGIQSSAGIGINIFGDVALKAAFVV-FNGATTPTLGFA  328 (330)
T ss_dssp             EEESEEESTTTSSEEECHHHHTTEEEE-EECSSSCEEEEE
T ss_pred             EEEEEECCCCCCCEEECHHHhCCEEEE-EECCCCCEEEEe
Confidence            11  11222233 58999999999874 898 45578775


No 12 
>d2pmaa1 b.50.1.3 (A:26-166) Uncharacterized protein LPG0085 {Legionella pneumophila [TaxId: 446]}
Probab=95.57  E-value=0.0048  Score=45.07  Aligned_cols=43  Identities=12%  Similarity=0.014  Sum_probs=36.4

Q ss_pred             ceeEeecceeEEEEEEEeecC--CCccccchhHHhhhCCeEEEccc
Q 039109          153 GVQLQLQGTQIEAYFYLLSLE--GCDAVLGAQWLCTLGSILWDFDK  196 (233)
Q Consensus       153 ~~~~~i~g~~~~~~~~Vl~l~--~~d~ILG~dwL~~~~~i~id~~~  196 (233)
                      .+++.++|..+.+.|.+.+-.  .|.++||.+||...+. .+|-..
T Consensus        92 ~~~i~ig~~~~~ie~tL~dR~~m~yp~LiGR~~L~~~~~-~VD~s~  136 (141)
T d2pmaa1          92 LLNIKLGDKVRTIKVNLTNRKRFLYPLLLGRDAIIDFNG-AVDPAL  136 (141)
T ss_dssp             EEEEEETTEEEEEEEEEECCCCCSCSEEECHHHHHHTTE-EEETTC
T ss_pred             EEEEEECCEEEEEEEEECCCCCCCCCEEECHHHHhcCCE-EECCch
Confidence            568899999999999999865  5999999999999877 487553


No 13 
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]}
Probab=95.34  E-value=0.037  Score=44.50  Aligned_cols=97  Identities=11%  Similarity=0.114  Sum_probs=60.9

Q ss_pred             eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceecc--CCceeceeEeecceeEEEE-------------
Q 039109          102 ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTS--PGRCKGVQLQLQGTQIEAY-------------  166 (233)
Q Consensus       102 ~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~--~~~~~~~~~~i~g~~~~~~-------------  166 (233)
                      ....++||||++..++...+++++--.....    ....++....+  ....+.+.+.+++..+...             
T Consensus       207 ~~~~~~iDSGt~~~~lp~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~p~~~f~~~g~~~~i~p~~y~~~~~~~~~  282 (329)
T d2bjua1         207 EKANCIVDSGTSAITVPTDFLNKMLQNLDVI----KVPFLPFYVTLCNNSKLPTFEFTSENGKYTLEPEYYLQHIEDVGP  282 (329)
T ss_dssp             EEEEEEECTTCCSEEECHHHHHHHTTTSSCE----ECTTSSCEEEETTCTTCCCEEEECSSCEEEECHHHHEEECTTTST
T ss_pred             cCCcccccccccceeCCHHHHHHHHHHhCCe----ecCCCCeeEeecccCCCCceeEEeCCEEEEECHHHhEEEeecCCC
Confidence            3678999999999999999999885443210    00011111111  1234456666666555432             


Q ss_pred             ----EEEeec--CCCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 ----FYLLSL--EGCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 ----~~Vl~l--~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                          +.+.+.  .....|||..||+.+-.+ .|+.+++|.|..
T Consensus       283 ~~C~~~i~~~~~~~~~~IlG~~fl~~~y~v-fD~~~~~iGfA~  324 (329)
T d2bjua1         283 GLCMLNIIGLDFPVPTFILGDPFMRKYFTV-FDYDNHSVGIAL  324 (329)
T ss_dssp             TEEEECEEECCCSSCEEEECHHHHHHEEEE-EETTTTEEEEEE
T ss_pred             CEEEEEEEECCCCCCCEEEchHhhCcEEEE-EECCCCEEEEEE
Confidence                122222  223469999999999874 999999999875


No 14 
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]}
Probab=94.91  E-value=0.018  Score=47.16  Aligned_cols=96  Identities=17%  Similarity=0.195  Sum_probs=58.2

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCce-eccC--CceeceeEeecceeEEEEE--EEee------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEK-LTSP--GRCKGVQLQLQGTQIEAYF--YLLS------  171 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~-~~~~--~~~~~~~~~i~g~~~~~~~--~Vl~------  171 (233)
                      ...++||||++..++...++.++.-.....    ....+|.. ..|.  ...+.+.+.++|..+....  ++.+      
T Consensus       206 ~~~aiiDSGtt~~~lP~~~~~~l~~~~~~~----~~~~~~~~~~~c~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~  281 (340)
T d1wkra_         206 STAGIVDTGTTLTLIASDAFAKYKKATGAV----ADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTA  281 (340)
T ss_dssp             EEEEEECTTBCSEEECHHHHHHHHHHHTCE----ECTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGGGGGG
T ss_pred             CcceEEecCCccEeccHHHHHHHHHHhCcc----ccCCceEEEEeccccCCCCceEEEECCEEEEEChHHeEeeccCcee
Confidence            345899999999999888777654222100    00011111 1121  1235678888887665431  1111      


Q ss_pred             ----------------c---CCCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          172 ----------------L---EGCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       172 ----------------l---~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                                      .   .+...|||..||+.+-. ..|..+++|.|..
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~ILG~~fl~~~yv-vfD~~~~~iGfA~  331 (340)
T d1wkra_         282 IGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYS-VYDTTNKRLGLAT  331 (340)
T ss_dssp             GTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEE-EEETTTTEEEEEE
T ss_pred             ecCccceEEEEEecccCCCCCCCCEEechHHhCCEEE-EEECCCCEEEEEE
Confidence                            0   12346999999999976 4899999999864


No 15 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.77  E-value=0.031  Score=44.77  Aligned_cols=96  Identities=13%  Similarity=0.030  Sum_probs=60.3

Q ss_pred             eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceec-c--CCceeceeEeecceeEEEE------------
Q 039109          102 ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLT-S--PGRCKGVQLQLQGTQIEAY------------  166 (233)
Q Consensus       102 ~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~-~--~~~~~~~~~~i~g~~~~~~------------  166 (233)
                      ....++||||++..++.+.+++.+--......     ..++.... |  ....+.+.+.++|..+...            
T Consensus       209 ~~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~c  283 (323)
T d3cmsa_         209 GGCQAILDTGTSKLVGPSSDILNIQQAIGATQ-----NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQDQGFC  283 (323)
T ss_dssp             TCEEEEECTTCCSEEECHHHHHHHHHHHTCEE-----ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEEETTEE
T ss_pred             CCeeEEEecCcceEEecHHHHHHHHHHhCcee-----ccCCceeEeccccCCCCeEEEEECCEEEEECHHHeEEcCCCEE
Confidence            35679999999999999999887643332110     01111111 1  1234567777777665432            


Q ss_pred             -EEEeecCCC-ccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 -FYLLSLEGC-DAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 -~~Vl~l~~~-d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                       +.+.+..+. ..|||..||+.+-. ..|+++.+|.|..
T Consensus       284 ~~~i~~~~~~~~~iLG~~~l~~~yv-vfD~~~~~igfa~  321 (323)
T d3cmsa_         284 TSGFQSENHSQKWILGDVFIREYYS-VFDRANNLVGLAK  321 (323)
T ss_dssp             EESEEEC---CCEEECHHHHTTEEE-EEETTTTEEEEEE
T ss_pred             EEEEEeCCCCCCEEEcHHhhCcEEE-EEECCCCEEEEEE
Confidence             222233333 47999999999987 4999999998864


No 16 
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=94.70  E-value=0.18  Score=41.25  Aligned_cols=106  Identities=15%  Similarity=0.185  Sum_probs=62.4

Q ss_pred             EEEEEeeCC---eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceecc--CCceeceeEeecceeEEEE-
Q 039109           93 MRLQSSISK---ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTS--PGRCKGVQLQLQGTQIEAY-  166 (233)
Q Consensus        93 ~~v~~~i~~---~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~--~~~~~~~~~~i~g~~~~~~-  166 (233)
                      +.+.+.+++   ....++||||++..++....++++.-.....    ....++....|  ....+.+.+.++|..+.+. 
T Consensus       241 i~l~~~~~~~~~~~~~~iiDTGTs~~~lP~~~~~~l~~~i~~~----~~~~~~~~~~~~~~~~~P~itf~f~g~~~~l~p  316 (373)
T d1miqa_         241 IDLDVHFGKQTMEKANVIVDSGTTTITAPSEFLNKFFANLNVI----KVPFLPFYVTTCDNKEMPTLEFKSANNTYTLEP  316 (373)
T ss_dssp             EEEEEEETTEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCE----ECTTSSCEEEETTCTTCCCEEEECSSCEEEECG
T ss_pred             EEEEEEECcEecCCcceEeccCCceeccCHHHHHHHHHHhCCe----eccCCCeeEeccccCCCceEEEEECCEEEEECH
Confidence            334444444   3567999999999999998877653222110    00001111111  1234566777777665432 


Q ss_pred             ----------------EEEeec--CCCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 ----------------FYLLSL--EGCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 ----------------~~Vl~l--~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                                      +.+.+.  .+--.|||..||+.+-.+ .|+.+++|-|..
T Consensus       317 ~~y~~~~~~~~~~~C~~~~~~~~~~~~~~ILG~~fl~~~y~v-fD~~~~rIGfA~  370 (373)
T d1miqa_         317 EYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTV-FDYDKESVGFAI  370 (373)
T ss_dssp             GGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEE-EETTTTEEEEEE
T ss_pred             HHeeEEEEeCCCCEEEEEEEECCCCCCCEEEcHHhhCcEEEE-EECCCCEEEEEE
Confidence                            111222  222359999999999875 999999998864


No 17 
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=94.34  E-value=0.042  Score=44.54  Aligned_cols=95  Identities=15%  Similarity=0.135  Sum_probs=56.8

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCce-eccCC-ceeceeEeecceeEEEE--------------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEK-LTSPG-RCKGVQLQLQGTQIEAY--------------  166 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~-~~~~~-~~~~~~~~i~g~~~~~~--------------  166 (233)
                      ...++||||++..++...+++++.-.....     ...+|.. +.|.. ..+.+.+.++|..+.+.              
T Consensus       212 ~~~~iiDSGt~~~~lp~~~~~~l~~~~~~~-----~~~~~~~~~~C~~~~~p~i~f~f~g~~~~i~~~~y~~~~~~~~C~  286 (325)
T d2apra_         212 SFDGILDTGTTLLILPNNIAASVARAYGAS-----DNGDGTYTISCDTSAFKPLVFSINGASFQVSPDSLVFEEFQGQCI  286 (325)
T ss_dssp             CEEEEECTTCSSEEEEHHHHHHHHHHHTCE-----ECSSSCEEECSCGGGCCCEEEEETTEEEEECGGGGEEEEETTEEE
T ss_pred             eeeeeccCCCccccCCHHHHHHHHHHhCCc-----ccCCCceeecccCCCCCcEEEEECCEEEEEChHHeEEecCCCEEE
Confidence            347899999999999998877663221110     0011211 12221 22345666666555432              


Q ss_pred             EEEeecCCCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 FYLLSLEGCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 ~~Vl~l~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                      +.+.+...--.|||..||+.+-.+ .|..+++|-|..
T Consensus       287 ~~i~~~~~~~~iLG~~flr~~y~v-fD~~~~~IGfAp  322 (325)
T d2apra_         287 AGFGYGNWGFAIIGDTFLKNNYVV-FNQGVPEVQIAP  322 (325)
T ss_dssp             ESEEEESSSSEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEccCCCCCEEECHHHhCcEEEE-EECCCCEEeEEE
Confidence            111122223369999999999874 999999998864


No 18 
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]}
Probab=94.15  E-value=0.047  Score=43.89  Aligned_cols=97  Identities=13%  Similarity=0.121  Sum_probs=59.6

Q ss_pred             CCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceec---cCCceeceeEeecceeEEEE----------
Q 039109          100 SKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLT---SPGRCKGVQLQLQGTQIEAY----------  166 (233)
Q Consensus       100 ~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~---~~~~~~~~~~~i~g~~~~~~----------  166 (233)
                      ......++||||++..++...++.++--....      ...++....   +....+.+.+.++|..+...          
T Consensus       205 ~~~~~~~iiDsGts~~~lp~~~~~~l~~~i~~------~~~~~~~~~~~~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~  278 (324)
T d1am5a_         205 ACEGCQAIVDTGTSKIVAPVSALANIMKDIGA------SENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGDQA  278 (324)
T ss_dssp             CCCCEEEEECTTCSSEEECTTTHHHHHHHHTC------EECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEESSS
T ss_pred             ccCCcceeeccCcccccCCHHHHHHHHHHhCC------cccCCcccccccccccCCceEEEECCEEEEECHHHhEecCCC
Confidence            34466789999999999998887665222111      011111111   12334567777777665543          


Q ss_pred             ---EEEeec----CCCc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 ---FYLLSL----EGCD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 ---~~Vl~l----~~~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                         +.+..+    ..-+ .|||..||+.+-.+ .|.++++|.|..
T Consensus       279 ~c~~~i~~~~~~~~~~~~~ILG~~fl~~~y~v-fD~~~~~igfA~  322 (324)
T d1am5a_         279 FCTSGLGSSGVPSNTSELWIFGDVFLRNYYTI-YDRTNNKVGFAP  322 (324)
T ss_dssp             CEEECEEECCSCCSSSCEEEECHHHHHHEEEE-EETTTTEEEEEE
T ss_pred             eEEEEEEecCcCCCCCCCEEECHHhhcCEEEE-EECCCCEEEEEE
Confidence               112221    1122 48999999999885 999999998864


No 19 
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
Probab=94.03  E-value=0.03  Score=45.64  Aligned_cols=96  Identities=19%  Similarity=0.311  Sum_probs=53.6

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCc---eeccCCceeceeEeec-ceeEEEE--EEEe------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGE---KLTSPGRCKGVQLQLQ-GTQIEAY--FYLL------  170 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~---~~~~~~~~~~~~~~i~-g~~~~~~--~~Vl------  170 (233)
                      ...++||||++..++...+++++--....   ......++.   ...| ...+.+.+.+. +..+...  .+++      
T Consensus       212 ~~~~iiDSGts~~~lp~~~~~~l~~~l~~---~~~~~~~~~~~~~~~c-~~~p~i~f~f~~~~~~~i~~~~y~~~~~~~~  287 (342)
T d1eaga_         212 NVDVLLDSGTTITYLQQDLADQIIKAFNG---KLTQDSNGNSFYEVDC-NLSGDVVFNFSKNAKISVPASEFAASLQGDD  287 (342)
T ss_dssp             EEEEEECTTCSSEEECHHHHHHHHHHTTC---EEEECTTSCEEEEEES-CCCSEEEEECSTTCEEEEEGGGGEEEC---C
T ss_pred             ccccccccCCccccCCHHHHHHHHHHhCc---cccccCCCCceecccc-ccCCCEEEEECCCEEEEEChHHeEEEecCCC
Confidence            44689999999999999998886432211   001111111   0111 11234444443 2323211  0111      


Q ss_pred             ---------ecCCCc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          171 ---------SLEGCD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       171 ---------~l~~~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                               .....| .|||..||+.+-.+ .|+++++|-|..
T Consensus       288 ~~~~~~~~~~~~~~~~~ILG~~fl~~~y~v-fD~~~~~iGfA~  329 (342)
T d1eaga_         288 GQPYDKCQLLFDVNDANILGDNFLRSAYIV-YDLDDNEISLAQ  329 (342)
T ss_dssp             CSCTTEEEECEEECTTCEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             CceeeEEEEccCCCCCcEECHHhhCcEEEE-EECCCCEEEEEE
Confidence                     111112 38999999999885 999999999964


No 20 
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.01  E-value=0.095  Score=42.22  Aligned_cols=96  Identities=11%  Similarity=0.040  Sum_probs=60.6

Q ss_pred             eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCC--ceeceeEeecceeEEEEE------------
Q 039109          102 ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPG--RCKGVQLQLQGTQIEAYF------------  167 (233)
Q Consensus       102 ~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~--~~~~~~~~i~g~~~~~~~------------  167 (233)
                      ....++||||++..++...+++.+--.....     ...++-...|..  ..+.+.+.++|..+.+..            
T Consensus       216 ~~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~-----~~~~~~~~~c~~~~~~P~l~f~f~g~~~~l~p~~yl~~~~~~~~  290 (337)
T d1hrna_         216 DGCLALVDTGASYISGSTSSIEKLMEALGAK-----KRLFDYVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSK  290 (337)
T ss_dssp             TCEEEEECTTCSSEEECHHHHHHHHHHHTCE-----ECSSCEEEETTTGGGCCCEEEEETTEEEEECHHHHBCCCCCCTT
T ss_pred             cCcceEEeCCCcceeccHHHHHHHHHHhCCc-----ccccceeeeccccCCCCceeEEECCEEEEEChHHeEEEecCCCC
Confidence            3457899999999999998888763322111     011122233322  246778888887776531            


Q ss_pred             --EEeecC-------C-CccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          168 --YLLSLE-------G-CDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       168 --~Vl~l~-------~-~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                        .++.+.       . -..|||..||+.+-.+ .|.++++|-|..
T Consensus       291 ~~C~~~i~~~~~~~~~~~~~ILG~~fl~~~y~v-fD~~~~~IGfA~  335 (337)
T d1hrna_         291 KLCTLAIHAMDIPPPTGPTWALGATFIRKFYTE-FDRRNNRIGFAL  335 (337)
T ss_dssp             SEEEBSEEECCCCTTTCSCEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             CEEEEEEEcCCcCCCCCCCEEECHHhhCCEEEE-EECCCCEEEEEE
Confidence              111111       1 1248999999999774 999999998864


No 21 
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=93.91  E-value=0.053  Score=43.66  Aligned_cols=95  Identities=17%  Similarity=0.200  Sum_probs=59.0

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCc-eeccC--CceeceeEeecceeEEEE-------------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGE-KLTSP--GRCKGVQLQLQGTQIEAY-------------  166 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~-~~~~~--~~~~~~~~~i~g~~~~~~-------------  166 (233)
                      ...++||||++..++...+++++.-.....     ...++. ...|.  ...+.+.+.++|..+...             
T Consensus       212 ~~~~iiDSGts~~~lp~~~~~~l~~~~~~~-----~~~~~~~~~~c~~~~~~P~i~f~f~g~~~~l~p~~y~~~~~~~c~  286 (329)
T d1dpja_         212 SHGAAIDTGTSLITLPSGLAEMINAEIGAK-----KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVSGSCI  286 (329)
T ss_dssp             SCEEEECTTCSCEEECHHHHHHHHHHHTCE-----ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEETTEEE
T ss_pred             ecccccCcccceeeCCHHHHHHHHHHhCCc-----cccceeEEEeccccCccceEEEEECCEEEEECHHHeEEecCCcEE
Confidence            456789999999999999988774332110     001111 12221  124556777777655532             


Q ss_pred             EEEeecCC----Cc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 FYLLSLEG----CD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 ~~Vl~l~~----~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                      +.+.++..    -+ .|||..||+.+-.+ .|+++++|.|..
T Consensus       287 ~~~~~~~~~~~~~~~~iLG~~fl~~~y~v-fD~~~~~igfA~  327 (329)
T d1dpja_         287 SAITPMDFPEPVGPLAIVGDAFLRKYYSI-YDLGNNAVGLAK  327 (329)
T ss_dssp             ECEEECCCCTTTCSEEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEEECccCCCCCCcEEEcHHhhCcEEEE-EECCCCEEEEEE
Confidence            12222211    12 59999999999875 999999998864


No 22 
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=93.78  E-value=0.045  Score=44.72  Aligned_cols=96  Identities=16%  Similarity=0.253  Sum_probs=53.3

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCC-ceeccCCceeceeEeec-ceeEEEE------------EE
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANG-EKLTSPGRCKGVQLQLQ-GTQIEAY------------FY  168 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G-~~~~~~~~~~~~~~~i~-g~~~~~~------------~~  168 (233)
                      ...++||||++..++....++++--....    .....++ -...|....+.+.+.++ |..+.+.            ..
T Consensus       212 ~~~aiiDSGt~~~~lp~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~p~i~f~f~~g~~~~i~~~~y~~~~~~~~~C  287 (334)
T d1j71a_         212 NADVVLDSGTTITYFSQSTADKFARIVGA----TWDSRNEIYRLPSCDLSGDAVFNFDQGVKITVPLSELILKDSDSSIC  287 (334)
T ss_dssp             EEEEEECTTCSSEEECHHHHHHHHHHHTC----EEETTTTEEECSSSCCCSEEEEEESTTCEEEEEGGGGEEECSSSSCE
T ss_pred             cccccccCCCcceeccHHHHHHHHHHhCC----EEcCCCCeeeccccccCCCceEEeCCCEEEEEChHHeEEecCCCCEE
Confidence            34589999999999999998876311100    0000000 01112222233444442 3333322            01


Q ss_pred             EeecC-CCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          169 LLSLE-GCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       169 Vl~l~-~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                      ++.+. +-..|||..||+.+-.+ .|+.+++|.|..
T Consensus       288 ~~~i~~~~~~ILG~~fl~~~y~v-fD~~n~~iGfA~  322 (334)
T d1j71a_         288 YFGISRNDANILGDNFLRRAYIV-YDLDDKTISLAQ  322 (334)
T ss_dssp             EESEEECTTCEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEecCCCCcEECHHhhCcEEEE-EECCCCEEEEEE
Confidence            11111 12359999999999874 999999999964


No 23 
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=93.50  E-value=0.089  Score=43.45  Aligned_cols=95  Identities=12%  Similarity=0.149  Sum_probs=62.4

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCcee-ccC--CceeceeEeecceeEEEE-------------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKL-TSP--GRCKGVQLQLQGTQIEAY-------------  166 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~-~~~--~~~~~~~~~i~g~~~~~~-------------  166 (233)
                      ...++||||++..++.+..+.++.-.....     ...+|... .|.  ...+.+.+.++|..+.+.             
T Consensus       253 ~~~aiiDSGTs~~~lp~~~~~~i~~~l~~~-----~~~~~~~~~~C~~~~~~P~l~f~f~g~~~~l~~~~yi~~~~~~c~  327 (370)
T d3psga_         253 GCQAIVDTGTSLLTGPTSAIANIQSDIGAS-----ENSDGEMVISCSSIDSLPDIVFTIDGVQYPLSPSAYILQDDDSCT  327 (370)
T ss_dssp             CEEEEECTTCCSEEEEHHHHHHHHHHTTCE-----ECTTCCEECCGGGGGGCCCEEEEETTEEEEECHHHHEEECSSCEE
T ss_pred             CccEEEecCCceEeCCHHHHHHHHHHhCCe-----eecCCcEEEeccccCCCceEEEEECCEEEEEChHHeEEEcCCeEE
Confidence            467899999999999999998875333211     11233222 232  234578888888877643             


Q ss_pred             --EEEeecC---CCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 --FYLLSLE---GCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 --~~Vl~l~---~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                        |..+...   +--.|||..||+.+-.+ .|+.+.+|-|..
T Consensus       328 ~~~~~~~~~~~~~~~~ILG~~flr~~y~v-fD~~~~~IGfAp  368 (370)
T d3psga_         328 SGFEGMDVPTSSGELWILGDVFIRQYYTV-FDRANNKVGLAP  368 (370)
T ss_dssp             ESEEEECCCTTSCCEEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEEEcccCCCCCCcEEECHHhhcCEEEE-EECCCCEEEEEe
Confidence              1111111   12269999999999874 999999998864


No 24 
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.28  E-value=0.088  Score=42.46  Aligned_cols=97  Identities=14%  Similarity=0.131  Sum_probs=59.2

Q ss_pred             eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccC--CceeceeEeecceeEEEEE------------
Q 039109          102 ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSP--GRCKGVQLQLQGTQIEAYF------------  167 (233)
Q Consensus       102 ~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~--~~~~~~~~~i~g~~~~~~~------------  167 (233)
                      ....++||||++..++...+++.+.-.....    ......-...|.  ...+.+.+.++|..+....            
T Consensus       213 ~~~~~iiDSGtt~~~lp~~~~~~l~~~~~~~----~~~~~~~~~~c~~~~~~P~i~f~f~g~~~~l~~~~y~~~~~~~~~  288 (335)
T d1smra_         213 EGCEVVVDTGSSFISAPTSSLKLIMQALGAK----EKRLHEYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRD  288 (335)
T ss_dssp             TCEEEEECTTBSSEEECHHHHHHHHHHHTCE----EEETTEEEEEGGGGGGSCCEEEEETTEEEEECHHHHBTT----CC
T ss_pred             CCceEEEeCCCCcccCCHHHHHHHHHHhCCe----eccCCceeecccccCCCCccEEEECCeEEEEChHHeEEEeccCCC
Confidence            3567899999999999999998874322110    000111111121  1235667777776655431            


Q ss_pred             -----EEeecC-----CCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          168 -----YLLSLE-----GCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       168 -----~Vl~l~-----~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                           .+.+..     +--.|||..||+.+-.+ .|+.+++|-|..
T Consensus       289 ~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~yvv-fD~~~~~iGfA~  333 (335)
T d1smra_         289 KLCTVALHAMDIPPPTGPVWVLGATFIRKFYTE-FDRHNNRIGFAL  333 (335)
T ss_dssp             CEEEBSEEECCCCTTTCSCEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             CEEEEEEEecCcCCCCCCcEEECHHHhCcEEEE-EECCCCEEEEEE
Confidence                 111111     11259999999999874 999999998864


No 25 
>g1htr.1 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens), progastricsin (pepsinogen C) [TaxId: 9606]}
Probab=92.79  E-value=0.11  Score=42.72  Aligned_cols=96  Identities=16%  Similarity=0.274  Sum_probs=60.1

Q ss_pred             eeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCc-eeccCC--ceeceeEeecceeEEEE--EEEee-----
Q 039109          102 ASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGE-KLTSPG--RCKGVQLQLQGTQIEAY--FYLLS-----  171 (233)
Q Consensus       102 ~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~-~~~~~~--~~~~~~~~i~g~~~~~~--~~Vl~-----  171 (233)
                      ....++||||++..++...+++.+.-......     ..+|. .+.|..  ..+.+.+.++|..+.+.  -++++     
T Consensus       253 ~~~~aiiDSGtt~~~lp~~~~~~l~~~~~~~~-----~~~~~~~~~C~~~~~~P~i~f~f~g~~~~l~~~~yi~~~~~~c  327 (372)
T g1htr.1         253 EGCQAIVDTGTSLLTVPQQYMSALLQATGAQE-----DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNNGYC  327 (372)
T ss_dssp             TCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE-----CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECSSCE
T ss_pred             CCceEEEeCCCCcEEccHHHHHHHHHHhCCee-----ccCCcEEeeccccCcCCcEEEEECCEEEEECHHHeEEecCCEE
Confidence            35679999999999999999887643222110     01111 122322  23567777777666543  11111     


Q ss_pred             --------c---CCCc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          172 --------L---EGCD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       172 --------l---~~~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                              +   .+.+ .|||..||+.+-.+ .|+.++++-|..
T Consensus       328 ~~~i~~~~~~~~~~~~~~ILG~~fl~~~y~v-fD~~~~~iGfA~  370 (372)
T g1htr.1         328 TVGVEPTYLSSQNGQPLWILGDVFLRSYYSV-YDLGNNRVGFAT  370 (372)
T ss_dssp             EESEEEECCCCTTSSCEEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEEEecccCCCCCCccEEEcHHhhCCEEEE-EECCCCEEEEEe
Confidence                    1   1122 49999999999885 999999998864


No 26 
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]}
Probab=92.11  E-value=0.12  Score=42.39  Aligned_cols=28  Identities=18%  Similarity=0.339  Sum_probs=24.7

Q ss_pred             CccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          175 CDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       175 ~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                      ...|||..||+.+-.+ .|..+++|-|..
T Consensus       344 ~~~ILG~~flr~~y~v-fD~~~~~IGfA~  371 (381)
T d1t6ex_         344 PAVILGGAQMEDFVLD-FDMEKKRLGFSR  371 (381)
T ss_dssp             CSEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             CcEEECHHHhCcEEEE-EECCCCEEEEEE
Confidence            4579999999999885 999999999975


No 27 
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=91.11  E-value=0.29  Score=38.86  Aligned_cols=95  Identities=15%  Similarity=0.212  Sum_probs=60.5

Q ss_pred             CCeeEEEEEcCCCccccccHHHHHHhCCccC----CCceeEEEEcCCceecc--CCceeceeEeecceeEEEEE------
Q 039109          100 SKASLTILIDSGSTHNFLHHKFAKITGLKSE----PGCLLSVVVANGEKLTS--PGRCKGVQLQLQGTQIEAYF------  167 (233)
Q Consensus       100 ~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~----~~~~~~v~~a~G~~~~~--~~~~~~~~~~i~g~~~~~~~------  167 (233)
                      ......+++|||.+...+.......+--...    .....        ...|  ....+.+.+.++|..+.+..      
T Consensus       213 ~~~~~~~iiDtgt~~~~l~~~~~~~~~~~l~~~~~~~~~~--------~~~~~~~~~~p~itf~f~g~~~~l~~~~~~~~  284 (337)
T d1qdma2         213 CAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGSPMGES--------AVDCGSLGSMPDIEFTIGGKKFALKPEEYILK  284 (337)
T ss_dssp             TTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCCSSSCC--------EECGGGGTTCCCEEEEETTEEEEECHHHHEEE
T ss_pred             cCCCceEEeeccCcceecchHHHHHHHHHhccccccCCcc--------cccccccCCCCceEEEECCEEEEEChHHeEEE
Confidence            4456789999999999998888776533221    11111        1111  12345667777776665431      


Q ss_pred             -----------EEeec-----CCCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          168 -----------YLLSL-----EGCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       168 -----------~Vl~l-----~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                                 .+..+     .+...|||..||+.+-.+ .|+++++|-|..
T Consensus       285 ~~~~~~~~C~~~i~~~~~~~~~~~~~IlG~~fl~~~y~v-fD~~~~~igfA~  335 (337)
T d1qdma2         285 VGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTV-FDYGKLRIGFAK  335 (337)
T ss_dssp             CSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             eccCCCCEEEEEEEecCcCCCCCCcEEEhHHhhcCEEEE-EECCCCEEEEEE
Confidence                       11111     123479999999999885 999999998864


No 28 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=88.83  E-value=0.32  Score=39.37  Aligned_cols=36  Identities=25%  Similarity=0.486  Sum_probs=28.3

Q ss_pred             EEEeecCCCccccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 FYLLSLEGCDAVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 ~~Vl~l~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                      +.+.+..+-..|||..||+.+-.+ .|+.+++|-|..
T Consensus       314 ~~~~~~~~~~~ILG~~fl~~~yvv-fD~~~~~iGfA~  349 (357)
T d1mppa_         314 FIVLPDGGNQFIVGNLFLRFFVNV-YDFGKNRIGFAP  349 (357)
T ss_dssp             ESEEEESSSCCEEEHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             EEEcCCCCCCEEechHHhCCEEEE-EECCCCEEEEEE
Confidence            344455555679999999999874 999999999874


No 29 
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.15  E-value=1.1  Score=36.49  Aligned_cols=32  Identities=16%  Similarity=0.255  Sum_probs=26.8

Q ss_pred             cCCCccccchhHHhhhCCeEEEccccEEEEEeC
Q 039109          172 LEGCDAVLGAQWLCTLGSILWDFDKMEMQFTKD  204 (233)
Q Consensus       172 l~~~d~ILG~dwL~~~~~i~id~~~~~~~f~~~  204 (233)
                      ..+...|||.+||+.+-.+ .|+.+++|-|...
T Consensus       328 ~~~~~~ILG~~Flr~~y~v-fD~~~~~IGfA~a  359 (387)
T d2qp8a1         328 QSSTGTVMGAVIMEGFYVV-FDRARKRIGFAVS  359 (387)
T ss_dssp             EESSCEEECHHHHTTEEEE-EETTTTEEEEEEE
T ss_pred             CCCCCEEEhHHhhCcEEEE-EECCCCEEEEEEC
Confidence            3445679999999999885 9999999999864


No 30 
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.75  E-value=1.4  Score=34.57  Aligned_cols=95  Identities=13%  Similarity=0.189  Sum_probs=58.5

Q ss_pred             eEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCcee-cc--CCceeceeEeecceeEEEE-----EE------
Q 039109          103 SLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKL-TS--PGRCKGVQLQLQGTQIEAY-----FY------  168 (233)
Q Consensus       103 ~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~-~~--~~~~~~~~~~i~g~~~~~~-----~~------  168 (233)
                      ...+++|||++..++.+.++.++--.....     ...++... .+  ....+.+.+.++|..+.++     +.      
T Consensus       217 ~~~~~iDsgt~~~~lp~~~~~~l~~~l~~~-----~~~~~~~~~~~~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~  291 (338)
T g1lya.1         217 GCEAIVDTGTSLMVGPVDEVRELQKAIGAV-----PLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGK  291 (338)
T ss_dssp             CEEEEECTTCSSEEECHHHHHHHHHHHTCE-----EEETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTS
T ss_pred             CeeEEeecCcceecCCHHHHHHHHHHHhhe-----eccCCceeeeccccCCCceEEEEECCEEEEEChHHeEEEEccCCC
Confidence            557899999999999999998875332110     01111111 11  1223456777777665543     11      


Q ss_pred             ------Eeec----CCCc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          169 ------LLSL----EGCD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       169 ------Vl~l----~~~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                            +...    ...+ .|||..||+.+-.+ .|.++++|.|..
T Consensus       292 ~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~v-fD~~~~~igfa~  336 (338)
T g1lya.1         292 TLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTV-FDRDNNRVGFAE  336 (338)
T ss_dssp             SEEEESEEECCCCTTTCCCEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             cEEEEEEEecccCCCCCCcEEEhHHhhccEEEE-EECCCCEEEEEE
Confidence                  1111    1112 58999999999885 999999998864


No 31 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=86.36  E-value=0.98  Score=35.45  Aligned_cols=94  Identities=11%  Similarity=0.164  Sum_probs=56.1

Q ss_pred             CeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccC--CceeceeEeecceeEEEE------------
Q 039109          101 KASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSP--GRCKGVQLQLQGTQIEAY------------  166 (233)
Q Consensus       101 ~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~--~~~~~~~~~i~g~~~~~~------------  166 (233)
                      .....+++|||++...+.+.+...+.-.........        ..|.  ...+.+.+.++|..+...            
T Consensus       208 ~~~~~~~~dsgt~~~~lp~~~~~~~~~~~~~~~~~~--------~~C~~~~~~p~itf~f~g~~~~i~~~~y~~~~~~~~  279 (326)
T g1b5f.1         208 APGCQAFADSGTSLLSGPTAIVTQINHAIGANEELQ--------VDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGE  279 (326)
T ss_dssp             TTCEEEEECTTCSSEEECHHHHHHHHHHTTCCCCCE--------ECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTT
T ss_pred             CCCceEEeeCCCceEEcChHHHHHHHHhhCCceeEE--------ccccCCCCCCcEEEEECCEEEEECHHHeEEEecCCC
Confidence            345678999999999998888776643322111111        1121  122345555555544431            


Q ss_pred             -----EEEeecCC---Cc-cccchhHHhhhCCeEEEccccEEEEEe
Q 039109          167 -----FYLLSLEG---CD-AVLGAQWLCTLGSILWDFDKMEMQFTK  203 (233)
Q Consensus       167 -----~~Vl~l~~---~d-~ILG~dwL~~~~~i~id~~~~~~~f~~  203 (233)
                           +.+.++..   -+ .|||..||+.+-.+ .|+++++|.|..
T Consensus       280 ~~~C~~~i~~~~~~~~~~~~ilG~~fl~~~yvv-fD~~~~~igfA~  324 (326)
T g1b5f.1         280 ATQCISGFTAMDATLLGPLWILGDVFMRPYHTV-FDYGNLLVGFAE  324 (326)
T ss_dssp             TCEEEESEEECCCBSSSBEEEECHHHHTTEEEE-EETTTTEEEEEE
T ss_pred             CCEEEEEEEeCCCCCCCCcEEECHHHhCCEEEE-EECCCCEEEEEE
Confidence                 11112211   12 48999999999875 999999998864


No 32 
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]}
Probab=72.04  E-value=2.6  Score=33.34  Aligned_cols=85  Identities=20%  Similarity=0.293  Sum_probs=45.4

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccccHHHHHHhCCccC----CCceeEEEEcCCceeccCCceeceeEeecceeEE-E
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFLHHKFAKITGLKSE----PGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQIE-A  165 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~----~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~~-~  165 (233)
                      ..+...|+  .+++.+++||||+..++...-+   .....    ....+.+..+.|..   .+....=.+.+++.... .
T Consensus        14 Y~~~i~iGtP~Q~~~~i~DTGSs~~wv~~~~c---~~~sst~~~~~~~~~i~Y~~gs~---~G~~~~D~~~~~~~~~~~~   87 (340)
T d1wkra_          14 YVVNVGVGSPATTYSLLVDTGSSNTWLGADKS---YVKTSTSSATSDKVSVTYGSGSF---SGTEYTDTVTLGSLTIPKQ   87 (340)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCCEECSSSC---CCCCTTCEEEEEEEEEECSSCEE---EEEEEEEEEEETTEEEEEE
T ss_pred             EEEEEEEcCCCeEEEEEEECCCcceEEcCCCC---CCCCCCcCCCCCeEEEEeCCeEE---EEEEEEEEEeeCCeeeccE
Confidence            45666776  4889999999999877632111   00110    12344555555542   23333345666664433 2


Q ss_pred             EEEEee----cCCCccccchhH
Q 039109          166 YFYLLS----LEGCDAVLGAQW  183 (233)
Q Consensus       166 ~~~Vl~----l~~~d~ILG~dw  183 (233)
                      .|-+..    ..+.|.|+|+.+
T Consensus        88 ~fg~~~~~~~~~~~~gi~g~g~  109 (340)
T d1wkra_          88 SIGVASRDSGFDGVDGILGVGP  109 (340)
T ss_dssp             EEEEEEEEESCTTCSEEEECSC
T ss_pred             EEEEEEeccCcccccceecccc
Confidence            233322    345677887653


No 33 
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=65.08  E-value=5.4  Score=31.96  Aligned_cols=90  Identities=18%  Similarity=0.222  Sum_probs=51.1

Q ss_pred             eEEEEEeeC--CeeEEEEEcCCCccccccHHHHHHhCCccC-------------CCceeEEEEcCCceeccCCceeceeE
Q 039109           92 TMRLQSSIS--KASLTILIDSGSTHNFLHHKFAKITGLKSE-------------PGCLLSVVVANGEKLTSPGRCKGVQL  156 (233)
Q Consensus        92 t~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~-------------~~~~~~v~~a~G~~~~~~~~~~~~~~  156 (233)
                      ...+...|+  .+++.+++||||+..++...-+........             ...++.+..++|..   .|....-.+
T Consensus        57 ~Y~~~i~iGtP~Q~~~vi~DTGSs~~Wv~~~~C~~~~~~~~~~yd~~~Sst~~~~~~~~~~~Yg~Gs~---~G~~~~d~~  133 (370)
T d3psga_          57 EYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATSQELSITYGTGSM---TGILGYDTV  133 (370)
T ss_dssp             CEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEE---EEEEEEEEE
T ss_pred             EEEEEEEEcCCCeEEEEEEeCCCCCeEEECccCCCcccccccccCCCcccccccCCCcEEEEeCCceE---EEEEEEEEE
Confidence            456677887  589999999999999985443332211111             02245566666642   233333355


Q ss_pred             eecceeEE-EEEEEee--------cCCCccccchhHH
Q 039109          157 QLQGTQIE-AYFYLLS--------LEGCDAVLGAQWL  184 (233)
Q Consensus       157 ~i~g~~~~-~~~~Vl~--------l~~~d~ILG~dwL  184 (233)
                      .+++.... ..|.+..        ..+.|.|+|+.|-
T Consensus       134 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~  170 (370)
T d3psga_         134 QVGGISDTNQIFGLSETEPGSFLYYAPFDGILGLAYP  170 (370)
T ss_dssp             EETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCG
T ss_pred             eeeceeeeeeEEEEEeeccCceecccccccccccccC
Confidence            66665443 2333322        1246899998653


No 34 
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]}
Probab=58.96  E-value=3.5  Score=32.09  Aligned_cols=90  Identities=17%  Similarity=0.230  Sum_probs=50.0

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHH---hCCccC-C--------CceeEEEEcCCceeccCCceeceeEeec
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKI---TGLKSE-P--------GCLLSVVVANGEKLTSPGRCKGVQLQLQ  159 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~---l~l~~~-~--------~~~~~v~~a~G~~~~~~~~~~~~~~~i~  159 (233)
                      -..+...|+.++..+++||||+..++...-+..   .+.+.- +        ..++.+..++|..+  .|..-.-.+.++
T Consensus        16 ~Y~~~i~vG~~~~~v~~DTGSs~~Wv~~~~C~~c~~~~~~~y~~s~Sst~~~~~~~~~~Y~~G~~~--~G~~~~D~~~~~   93 (323)
T d1bxoa_          16 EYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSSA--SGNVFTDSVTVG   93 (323)
T ss_dssp             CEEEEEEETTEEEEEEEETTCCCEEECBTTSCHHHHTTSCCBCHHHHCEEEEEEEEEEECTTSCEE--EEEEEEEEEEET
T ss_pred             EEEEEEEECCccEEEEEECCCcceEEECCCCCchhhcCCCCCCCcccccccCCCEEEEEeCCCCcE--EEEEEEEeeecc
Confidence            356778889999999999999987664432211   111110 1        12455666666543  233333356666


Q ss_pred             ceeEE-EEEEEee--------cCCCccccchhH
Q 039109          160 GTQIE-AYFYLLS--------LEGCDAVLGAQW  183 (233)
Q Consensus       160 g~~~~-~~~~Vl~--------l~~~d~ILG~dw  183 (233)
                      +.... ..+.+..        ....|.|||+-+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~GilGlg~  126 (323)
T d1bxoa_          94 GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAF  126 (323)
T ss_dssp             TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSC
T ss_pred             Ccccccceeeeeeeeeccccccccccccccccc
Confidence            65543 2222221        134688999864


No 35 
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]}
Probab=58.33  E-value=3.7  Score=31.98  Aligned_cols=89  Identities=16%  Similarity=0.216  Sum_probs=48.7

Q ss_pred             EEEEEeeCCeeEEEEEcCCCccccccHHH----HHHhCCccCCC--------ceeEEEEcCCceeccCCceeceeEeecc
Q 039109           93 MRLQSSISKASLTILIDSGSTHNFLHHKF----AKITGLKSEPG--------CLLSVVVANGEKLTSPGRCKGVQLQLQG  160 (233)
Q Consensus        93 ~~v~~~i~~~~~~~LiDSGAt~nfIs~~~----a~~l~l~~~~~--------~~~~v~~a~G~~~~~~~~~~~~~~~i~g  160 (233)
                      ..+...|+.+++.+++||||+..++.-.-    +...+-.-.+.        .++.+..++|...  .+....-.+.+++
T Consensus        17 Y~~~i~iG~q~~~l~~DTGSs~~Wv~~~~C~~~~~~~~~~~~~~sSt~~~~~~~~~i~Y~~G~~~--~G~~~~d~~~~~~   94 (323)
T d1izea_          17 YITQVTVGDDTLGLDFDTGSADLWVFSSQTPSSERSGHDYYTPGSSAQKIDGATWSISYGDGSSA--SGDVYKDKVTVGG   94 (323)
T ss_dssp             EEEEEEETTEEEEEEEETTCCCCEECBTTSCHHHHTTSCCBCCCTTCEEEEEEEEEEECTTSCEE--EEEEEEEEEEETT
T ss_pred             EEEEEEECCeeEEEEEECCCcceEEEcCCCCChhhcCCCccCccccccccCCCEEEEEcCCccee--eeEEEeeeeeccC
Confidence            55788899999999999999987763221    11111111111        1334445566443  2334344566666


Q ss_pred             eeEE-EEEEEee--------cCCCccccchhH
Q 039109          161 TQIE-AYFYLLS--------LEGCDAVLGAQW  183 (233)
Q Consensus       161 ~~~~-~~~~Vl~--------l~~~d~ILG~dw  183 (233)
                      .... ..|.+..        ....|.|||+.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~  126 (323)
T d1izea_          95 VSYDSQAVESAEKVSSEFTQDTANDGLLGLAF  126 (323)
T ss_dssp             EEEEEEEEEEEEEECHHHHHCTTCCEEEECSC
T ss_pred             ccccceEEEEEEeccCcccccccccccccccc
Confidence            5543 2233322        123689999863


No 36 
>d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.71  E-value=15  Score=22.76  Aligned_cols=41  Identities=12%  Similarity=0.161  Sum_probs=36.8

Q ss_pred             cCCeEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCcc
Q 039109           89 SPQTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKS  129 (233)
Q Consensus        89 ~~~t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~  129 (233)
                      .+.+|++.++..+....+-||..++..-+-..++.+.|.+.
T Consensus         4 ~~~~i~I~Vkt~~~~~~~~V~~~~tV~~lK~~i~~~~gi~~   44 (84)
T d1yqba1           4 SPHLIKVTVKTPKDKEDFSVTDTCTIQQLKEEISQRFKAHP   44 (84)
T ss_dssp             CTTEEEEEEECSSCEEEEEEETTCBHHHHHHHHHHHHTCCG
T ss_pred             CCCEEEEEEEcCCCcEEEEECCCCcHHHHHHHHHHHHCcCc
Confidence            56789999999888888999999999999999999999875


No 37 
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=45.25  E-value=7.8  Score=30.11  Aligned_cols=89  Identities=18%  Similarity=0.268  Sum_probs=48.1

Q ss_pred             eEEEEEeeC--CeeEEEEEcCCCccccccHHHHHHh-------CC-ccC-------CCceeEEEEcCCceeccCCceece
Q 039109           92 TMRLQSSIS--KASLTILIDSGSTHNFLHHKFAKIT-------GL-KSE-------PGCLLSVVVANGEKLTSPGRCKGV  154 (233)
Q Consensus        92 t~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~l-------~l-~~~-------~~~~~~v~~a~G~~~~~~~~~~~~  154 (233)
                      ...+...|+  .+++.++|||||+..+|.-.-+...       +. ...       ....+.+..++|.   +.|....-
T Consensus        16 ~Y~~~i~iGtP~Q~~~l~~DTGSs~~Wv~~~~C~~~~~~c~~~~~f~~~~SsT~~~~~~~~~~~Y~~gs---~~G~~~~D   92 (335)
T d1smra_          16 QYYGEIGIGTPPQTFKVIFDTGSANLWVPSTKCSRLYLACGIHSLYESSDSSSYMENGDDFTIHYGSGR---VKGFLSQD   92 (335)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCGGGGGSCCBCGGGCTTCEEEEEEEEEEETTEE---EEEEEEEE
T ss_pred             EEEEEEEECCCCeEEEEEEECCcccEEEEcCCCCCccccccCCCcCCCccCcccccCCCcEEEEecCce---EEEEEEEE
Confidence            456677776  7899999999999887732111111       00 000       0124455555553   23444444


Q ss_pred             eEeecceeEEEEEEEee--------cCCCccccchhH
Q 039109          155 QLQLQGTQIEAYFYLLS--------LEGCDAVLGAQW  183 (233)
Q Consensus       155 ~~~i~g~~~~~~~~Vl~--------l~~~d~ILG~dw  183 (233)
                      .+.+++......+....        ....|.|+|+.+
T Consensus        93 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~glg~  129 (335)
T d1smra_          93 SVTVGGITVTQTFGEVTQLPLIPFMLAQFDGVLGMGF  129 (335)
T ss_dssp             EEEETTEEEEEEEEEEEECCHHHHTTCSSSEEEECSC
T ss_pred             EEEecccccccEEEEEEeccccccccccccccccccc
Confidence            66777765554433221        123678888743


No 38 
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.90  E-value=40  Score=21.47  Aligned_cols=44  Identities=9%  Similarity=0.164  Sum_probs=37.0

Q ss_pred             cccCCeEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccC
Q 039109           87 VQSPQTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSE  130 (233)
Q Consensus        87 ~~~~~t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~  130 (233)
                      ...+.+|+|.++..+....+=||..+|..-+-..++.+.|.+..
T Consensus        27 ~~~~~~i~V~Vk~~~~~~~i~V~~~~tV~~LK~~I~~~~gi~~~   70 (103)
T d1j8ca_          27 PAEPKIIKVTVKTPKEKEEFAVPENSSVQQFKEAISKRFKSQTD   70 (103)
T ss_dssp             CCCCCCEEEEEECSSCEEEEEECTTCCHHHHHHHHHHHHCSCSS
T ss_pred             CCCCCeEEEEEECCCccEEEEECCCChHHHHHHHHHHHHCcCHH
Confidence            34567899999876666788899999999999999999998863


No 39 
>d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.90  E-value=12  Score=23.58  Aligned_cols=46  Identities=11%  Similarity=0.124  Sum_probs=38.5

Q ss_pred             ccccCCeEEEEEeeCCeeEEEE-EcCCCccccccHHHHHHhCCccCC
Q 039109           86 RVQSPQTMRLQSSISKASLTIL-IDSGSTHNFLHHKFAKITGLKSEP  131 (233)
Q Consensus        86 g~~~~~t~~v~~~i~~~~~~~L-iDSGAt~nfIs~~~a~~l~l~~~~  131 (233)
                      |......|.|.++.+++...+. |+.-.|..-+-..+..+.+.|+..
T Consensus         1 g~s~s~~~~i~Vk~~~~~~~i~~v~~~~tV~~LK~~i~~~t~vp~~~   47 (90)
T d1v5ta_           1 GSSGSSGLPIIVKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPER   47 (90)
T ss_dssp             CCCCCCSCCEEEEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTT
T ss_pred             CCCCCCcEEEEEEECCeEEEEEEeCCCCcHHHHHHHHHHHHcCCHHH
Confidence            4556778889999999999886 899999999999999999988543


No 40 
>g1lya.1 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.51  E-value=12  Score=28.73  Aligned_cols=26  Identities=19%  Similarity=0.356  Sum_probs=21.2

Q ss_pred             EEEEEeeCC--eeEEEEEcCCCcccccc
Q 039109           93 MRLQSSISK--ASLTILIDSGSTHNFLH  118 (233)
Q Consensus        93 ~~v~~~i~~--~~~~~LiDSGAt~nfIs  118 (233)
                      ..+...|+.  +++.+++||||+..++.
T Consensus        15 Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~   42 (338)
T g1lya.1          15 YYGEIGIGTPPQCFTVVFDTGSSNLWVP   42 (338)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEEE
T ss_pred             EEEEEEEcCCCeEEEEEEECCCcceEEe
Confidence            556677764  88999999999998874


No 41 
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]}
Probab=37.59  E-value=12  Score=29.24  Aligned_cols=26  Identities=19%  Similarity=0.388  Sum_probs=20.9

Q ss_pred             eEEEEEeeCC--eeEEEEEcCCCccccc
Q 039109           92 TMRLQSSISK--ASLTILIDSGSTHNFL  117 (233)
Q Consensus        92 t~~v~~~i~~--~~~~~LiDSGAt~nfI  117 (233)
                      ...+...|+.  +++.+++||||+..+|
T Consensus        13 ~Y~~~i~iGtP~q~~~~i~DTGS~~~Wv   40 (334)
T d1j71a_          13 SYAADIVVGSNQQKQTVVIDTGSSDLWV   40 (334)
T ss_dssp             SEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEEEcCCCeEEEEEEECCCcceEE
Confidence            4566677764  8899999999999887


No 42 
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]}
Probab=37.37  E-value=12  Score=28.57  Aligned_cols=28  Identities=14%  Similarity=0.361  Sum_probs=21.5

Q ss_pred             eEEEEEeeCC--eeEEEEEcCCCccccccH
Q 039109           92 TMRLQSSISK--ASLTILIDSGSTHNFLHH  119 (233)
Q Consensus        92 t~~v~~~i~~--~~~~~LiDSGAt~nfIs~  119 (233)
                      ...+.+.|+.  +++.+++||||+..++.-
T Consensus        15 ~Y~~~v~iGtP~q~~~~~~DTGS~~~Wv~~   44 (329)
T d2bjua1          15 MFYGDAEVGDNQQPFTFILDTGSANLWVPS   44 (329)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred             EEEEEEEECCCCEEEEEEEECCCcceEEEC
Confidence            3456667754  899999999999887743


No 43 
>d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.14  E-value=39  Score=21.27  Aligned_cols=43  Identities=23%  Similarity=0.234  Sum_probs=38.3

Q ss_pred             cCCeEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCC
Q 039109           89 SPQTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEP  131 (233)
Q Consensus        89 ~~~t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~  131 (233)
                      ....|.+.+..+++.+.+=||.-+|..-+-..+....++|...
T Consensus        14 ~~~~i~v~V~~~~k~~~i~v~~~~TV~~LK~~I~~~tgvp~~~   56 (95)
T d1v86a_          14 GKELVDLKIIWNKTKHDVKVPLDSTGSELKQKIHSITGLPPAM   56 (95)
T ss_dssp             CCCCEEEEEEETTEEEEEEECTTSBHHHHHHHHHHHHCSCSTT
T ss_pred             CccEEEEEEEECCEEEEEEECCCCcHHHHHHHHHHHhCCChhH
Confidence            4557899999999999999999999999999999999998643


No 44 
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]}
Probab=36.26  E-value=13  Score=28.30  Aligned_cols=25  Identities=16%  Similarity=0.359  Sum_probs=20.7

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccc
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFL  117 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfI  117 (233)
                      ..+.+.|+  .+++.+++||||+..++
T Consensus        17 Y~~~v~iGtP~q~~~l~~DTGS~~~Wv   43 (337)
T d1qdma2          17 YFGEIGVGTPPQKFTVIFDTGSSNLWV   43 (337)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred             EEEEEEEcCCCEEEEEEEECCCcceEE
Confidence            56677777  48899999999999876


No 45 
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.78  E-value=13  Score=28.59  Aligned_cols=88  Identities=16%  Similarity=0.272  Sum_probs=48.2

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccccHHHHHH-------hC-CccCC-------CceeEEEEcCCceeccCCceecee
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFLHHKFAKI-------TG-LKSEP-------GCLLSVVVANGEKLTSPGRCKGVQ  155 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~-------l~-l~~~~-------~~~~~v~~a~G~~~~~~~~~~~~~  155 (233)
                      ..+...|+  .+++.++|||||+..++--.-+..       .+ .....       ...+.+..++|.   +.+....-.
T Consensus        17 Y~~~i~iGtP~Q~~~~~~DTGS~~~Wv~~~~C~~~~~~c~~~~~y~~~~Sst~~~~~~~~~~~~~~g~---~~G~~~~d~   93 (337)
T d1hrna_          17 YYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGT---VSGFLSQDI   93 (337)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHSSCCBCGGGCSSCEEEEEEEEEEETTEE---EEEEEEEEE
T ss_pred             EEEEEEEeCCCEEEEEEEECCCcceEEEcCCCCCcccccccCCCCChhhCCceEECCccEEEEecCcE---EEEEEEEee
Confidence            56667775  478999999999998873211111       11 00000       123344444443   234444456


Q ss_pred             EeecceeEEEEEEEee--------cCCCccccchhH
Q 039109          156 LQLQGTQIEAYFYLLS--------LEGCDAVLGAQW  183 (233)
Q Consensus       156 ~~i~g~~~~~~~~Vl~--------l~~~d~ILG~dw  183 (233)
                      +.+++......+....        ....|.|||..+
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GilGl~~  129 (337)
T d1hrna_          94 ITVGGITVTQMFGEVTEMPALPFMLAEFDGVVGMGF  129 (337)
T ss_dssp             EEETTEEEEEEEEEEEECCHHHHTTCSSCEEEECSC
T ss_pred             eeecCceeeeEEEEEEeccccccccccccccccccc
Confidence            7777776654444332        124688888754


No 46 
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]}
Probab=35.01  E-value=14  Score=28.68  Aligned_cols=26  Identities=19%  Similarity=0.489  Sum_probs=20.3

Q ss_pred             eEEEEEeeC--CeeEEEEEcCCCccccc
Q 039109           92 TMRLQSSIS--KASLTILIDSGSTHNFL  117 (233)
Q Consensus        92 t~~v~~~i~--~~~~~~LiDSGAt~nfI  117 (233)
                      ...+...|+  .+++.+++||||+..+|
T Consensus        13 ~Y~~~i~iGtP~Q~~~~i~DTGS~~~Wv   40 (342)
T d1eaga_          13 TYAADITVGSNNQKLNVIVDTGSSDLWV   40 (342)
T ss_dssp             SEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEEECCCCeEEEEEEECCCcceEE
Confidence            345666776  58899999999998776


No 47 
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]}
Probab=34.74  E-value=15  Score=28.42  Aligned_cols=89  Identities=19%  Similarity=0.246  Sum_probs=48.4

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccccHHHHHHhCCccC------------CCceeEEEEcCCceeccCCceeceeEee
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFLHHKFAKITGLKSE------------PGCLLSVVVANGEKLTSPGRCKGVQLQL  158 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~------------~~~~~~v~~a~G~~~~~~~~~~~~~~~i  158 (233)
                      ..+...|+  .+++.++|||||+..+|...-+...+....            ....+.+..++|....  |..-.=.+.+
T Consensus        17 Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~~C~~c~~~~~~y~~~~SsT~~~~~~~~~~~y~~g~~~~--G~~~~D~~~~   94 (325)
T d2apra_          17 YYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSGQTKYDPNQSSTYQADGRTWSISYGDGSSAS--GILAKDNVNL   94 (325)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSCCTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEE--EEEEEEEEEE
T ss_pred             EEEEEEEeCCCEEEEEEEECCCCcEEEeCCCCCccccCCCccCcccCCceeECCeEEEEEeCCCCeEE--EEEEeeeEEe
Confidence            45677775  578999999999999886433322111100            0123455556665332  3333335667


Q ss_pred             cceeEEEE-EEEee-------cCCCccccchhH
Q 039109          159 QGTQIEAY-FYLLS-------LEGCDAVLGAQW  183 (233)
Q Consensus       159 ~g~~~~~~-~~Vl~-------l~~~d~ILG~dw  183 (233)
                      ++...... +.+..       ....|.|||+.+
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~GilGlg~  127 (325)
T d2apra_          95 GGLLIKGQTIELAKREAASFASGPNDGLLGLGF  127 (325)
T ss_dssp             TTEEEEEEEEEEEEEECHHHHTSSCSEEEECSC
T ss_pred             eeeeccCcceeeeeeecccccccccCccccccc
Confidence            77544322 22221       234789998654


No 48 
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.49  E-value=35  Score=20.94  Aligned_cols=45  Identities=13%  Similarity=0.100  Sum_probs=36.9

Q ss_pred             ccccCCeEEEEEee-CCeeEEEEEcCCCccccccHHHHHHhCCccC
Q 039109           86 RVQSPQTMRLQSSI-SKASLTILIDSGSTHNFLHHKFAKITGLKSE  130 (233)
Q Consensus        86 g~~~~~t~~v~~~i-~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~  130 (233)
                      |......|.|.++. +|+.+.+=|+...|..=+-..++.+.++|+.
T Consensus         1 G~~~s~~mqI~Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~   46 (87)
T d1wh3a_           1 GSSGSSGIQVFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKK   46 (87)
T ss_dssp             CCCCSSSEEEEEEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTT
T ss_pred             CCCCCCcEEEEEECCCCCEEEEEECCcCcHHHHHHHHHHHHCcChH
Confidence            34556778888875 7888888999999999999999999998853


No 49 
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]}
Probab=34.47  E-value=15  Score=27.95  Aligned_cols=27  Identities=19%  Similarity=0.287  Sum_probs=21.0

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccccH
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFLHH  119 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfIs~  119 (233)
                      ..+...|+  .+++.+++||||+..++.-
T Consensus        16 Y~~~i~vGtP~q~~~~~~DTGSs~~Wv~~   44 (323)
T d3cmsa_          16 YFGKIYLGTPPQEFTVLFDTGSSDFWVPS   44 (323)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEEEB
T ss_pred             EEEEEEECCCCEEEEEEEECCCCceEEec
Confidence            45666775  5799999999999887743


No 50 
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]}
Probab=34.31  E-value=15  Score=28.15  Aligned_cols=28  Identities=21%  Similarity=0.324  Sum_probs=21.5

Q ss_pred             eEEEEEee--CCeeEEEEEcCCCccccccH
Q 039109           92 TMRLQSSI--SKASLTILIDSGSTHNFLHH  119 (233)
Q Consensus        92 t~~v~~~i--~~~~~~~LiDSGAt~nfIs~  119 (233)
                      ...+...|  ..+++.+++||||+..++.-
T Consensus        13 ~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~   42 (324)
T d1am5a_          13 EYYGVISIGTPPESFKVIFDTGSSNLWVSS   42 (324)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEECB
T ss_pred             EEEEEEEEcCCCeEEEEEEECCCcceEEec
Confidence            34566677  45889999999999888753


No 51 
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]}
Probab=34.20  E-value=15  Score=28.59  Aligned_cols=91  Identities=14%  Similarity=0.210  Sum_probs=48.6

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccccHHHHHHhCCccC--------------CCceeEEEEcCCceeccCCceeceeE
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFLHHKFAKITGLKSE--------------PGCLLSVVVANGEKLTSPGRCKGVQL  156 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~--------------~~~~~~v~~a~G~~~~~~~~~~~~~~  156 (233)
                      ..+...|+  .+++.+++||||+..+|...-+...++...              ....+.+..++|..+.  +....=.+
T Consensus        17 Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~c~~~~c~~~~~y~~~~SsT~~~~~~~~~~~~Y~~G~~~~--G~~~~D~v   94 (330)
T d1oewa_          17 YITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIYTPSKSTTAKLLSGATWSISYGDGSSSS--GDVYTDTV   94 (330)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEE--EEEEEEEE
T ss_pred             EEEEEEEcCCCeEEEEEEECCccceEEECCCCCchhhcCCCccCccccccccccCCCeEEEEeCCCCcEE--EEEEEEEE
Confidence            45666775  478999999999987774433222211100              0123455556665432  22223356


Q ss_pred             eecceeEE-EEEEEee--------cCCCccccchhHHh
Q 039109          157 QLQGTQIE-AYFYLLS--------LEGCDAVLGAQWLC  185 (233)
Q Consensus       157 ~i~g~~~~-~~~~Vl~--------l~~~d~ILG~dwL~  185 (233)
                      .+++.... ..|....        ....|.|||..+..
T Consensus        95 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~GilGlg~~~  132 (330)
T d1oewa_          95 SVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFST  132 (330)
T ss_dssp             EETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGG
T ss_pred             EeecceecceEEEEeeeccccccccCCcccccccccCc
Confidence            66665433 3333332        23578999986443


No 52 
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]}
Probab=34.06  E-value=15  Score=28.19  Aligned_cols=87  Identities=15%  Similarity=0.239  Sum_probs=46.5

Q ss_pred             EEEEEeeC--CeeEEEEEcCCCccccccHHHHH-----HhCC-ccC-------CCceeEEEEcCCceeccCCceeceeEe
Q 039109           93 MRLQSSIS--KASLTILIDSGSTHNFLHHKFAK-----ITGL-KSE-------PGCLLSVVVANGEKLTSPGRCKGVQLQ  157 (233)
Q Consensus        93 ~~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~-----~l~l-~~~-------~~~~~~v~~a~G~~~~~~~~~~~~~~~  157 (233)
                      ..+...|+  .+++.+++||||+..++.-.-+.     ..+. ...       ......+..++|.   +.+....-.+.
T Consensus        15 Y~~~i~iGtP~q~~~~~iDTGSs~~Wv~~~~C~~~~c~~~~~f~~~~Sst~~~~~~~~~~~y~~gs---~~G~~~~D~~~   91 (329)
T d1dpja_          15 YYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLHSKYDHEASSSYKANGTEFAIQYGTGS---LEGYISQDTLS   91 (329)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE---EEEEEEEEEEE
T ss_pred             EEEEEEEeCCCeEEEEEEECCcccEEEECCCCCCccccCCCcCCcccCCceeECCeeEEEEccCce---EEEEEEEEEEE
Confidence            45667775  58899999999998877432211     1111 000       0123455555553   23444444666


Q ss_pred             ecceeEE-EEEEEeec--------CCCccccchh
Q 039109          158 LQGTQIE-AYFYLLSL--------EGCDAVLGAQ  182 (233)
Q Consensus       158 i~g~~~~-~~~~Vl~l--------~~~d~ILG~d  182 (233)
                      +++.... ..|.....        ...|.|||..
T Consensus        92 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~Glg  125 (329)
T d1dpja_          92 IGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLG  125 (329)
T ss_dssp             ETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECS
T ss_pred             ecceEEeeEEEEEEeeccCccccccccccccccc
Confidence            7665432 33333321        2367888864


No 53 
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]}
Probab=32.93  E-value=18  Score=28.26  Aligned_cols=26  Identities=23%  Similarity=0.478  Sum_probs=20.9

Q ss_pred             eEEEEEeeC--CeeEEEEEcCCCccccc
Q 039109           92 TMRLQSSIS--KASLTILIDSGSTHNFL  117 (233)
Q Consensus        92 t~~v~~~i~--~~~~~~LiDSGAt~nfI  117 (233)
                      -..+...|+  .+++.++|||||+..+|
T Consensus        15 ~Y~~~i~iGtP~Q~~~~ivDTGSs~~wv   42 (357)
T d1mppa_          15 EYAIPVSIGTPGQDFYLLFDTGSSDTWV   42 (357)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred             EEEEEEEEcCCCeEEEEEEeCCCcceEE
Confidence            355666776  68899999999998876


No 54 
>g1b5f.1 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin {Cynara cardunculus [TaxId: 4265]}
Probab=32.55  E-value=17  Score=27.74  Aligned_cols=26  Identities=19%  Similarity=0.335  Sum_probs=20.6

Q ss_pred             eEEEEEeeC--CeeEEEEEcCCCccccc
Q 039109           92 TMRLQSSIS--KASLTILIDSGSTHNFL  117 (233)
Q Consensus        92 t~~v~~~i~--~~~~~~LiDSGAt~nfI  117 (233)
                      ...+...|+  .+++.+++||||+..++
T Consensus        14 ~Y~~~i~IGtP~Q~~~l~~DTGS~~~Wv   41 (326)
T g1b5f.1          14 SYFGEIGIGTPPQKFTVIFDTGSSVLWV   41 (326)
T ss_dssp             EEEEEEEETTTTEEEEEEEETTCCCEEE
T ss_pred             EEEEEEEECCCCeEEEEEEECCCcceEE
Confidence            345677785  58899999999998875


No 55 
>d1fc2c_ a.8.1.1 (C:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=31.51  E-value=8.1  Score=21.09  Aligned_cols=31  Identities=35%  Similarity=0.488  Sum_probs=23.5

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHhhcCCchhh
Q 039109            4 EYQTRFERLLARAGHLTDKQEAECFISGLKDGL   36 (233)
Q Consensus         4 eY~~~Fe~L~~~~~~l~~~~~~~~F~~GL~~~i   36 (233)
                      |-...|-+.++ ++.|.+++. .-||..|++|=
T Consensus         4 eqq~Af~Eil~-lPNLne~Qr-n~fI~SLkDDP   34 (44)
T d1fc2c_           4 EQQNAFYEILH-LPNLNEEQR-NGFIQSLKDDP   34 (44)
T ss_dssp             SHHHHHHHHHT-CSSSCTHHH-HHHHHHHHHCT
T ss_pred             HHHHHHHHHHh-CCCCCHHHH-HHHHHHhccCc
Confidence            34567777776 799999887 56999998864


No 56 
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.11  E-value=21  Score=28.18  Aligned_cols=27  Identities=22%  Similarity=0.421  Sum_probs=21.8

Q ss_pred             EEEEEeeCC--eeEEEEEcCCCccccccH
Q 039109           93 MRLQSSISK--ASLTILIDSGSTHNFLHH  119 (233)
Q Consensus        93 ~~v~~~i~~--~~~~~LiDSGAt~nfIs~  119 (233)
                      ..+...|+.  +++.++|||||+..+|..
T Consensus        16 Y~~~i~IGtP~Q~~~li~DTGSs~lWv~~   44 (387)
T d2qp8a1          16 YYVEMTVGSPPQTLNILVDTGSSNFAVGA   44 (387)
T ss_dssp             EEEEEEETTTTEEEEEEEETTCCCEEEEC
T ss_pred             EEEEEEECCCCEEEEEEEECCccceEEcc
Confidence            567778864  799999999999888743


No 57 
>d1deeg_ a.8.1.1 (G:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=30.91  E-value=11  Score=21.27  Aligned_cols=30  Identities=33%  Similarity=0.485  Sum_probs=23.3

Q ss_pred             HHHHHHHHHHhCCCChHHHHHHhhcCCchhhh
Q 039109            6 QTRFERLLARAGHLTDKQEAECFISGLKDGLR   37 (233)
Q Consensus         6 ~~~Fe~L~~~~~~l~~~~~~~~F~~GL~~~ir   37 (233)
                      +..|-+.++ ++++++++. .-||..|+++=.
T Consensus         3 q~Afyeil~-lpnl~eeQr-n~fI~sLkddPs   32 (51)
T d1deeg_           3 QSAFYEILN-MPNLNEAQR-NGFIQSLKDDPS   32 (51)
T ss_dssp             HHHHHHHHH-CSSSCHHHH-HHHHHHHHHCGG
T ss_pred             hhhHHHHHh-CCCCCHHHH-HHHHHHHhhChH
Confidence            456777766 799999987 569999988644


No 58 
>d1t3qa2 d.15.4.2 (A:7-87) Quinoline 2-oxidoreductase small subunit QorS, N-domain {Pseudomonas putida [TaxId: 303]}
Probab=30.12  E-value=57  Score=20.06  Aligned_cols=58  Identities=16%  Similarity=0.381  Sum_probs=35.5

Q ss_pred             CeEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcCCceeccCCceeceeEeecceeE
Q 039109           91 QTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVANGEKLTSPGRCKGVQLQLQGTQI  163 (233)
Q Consensus        91 ~t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~G~~~~~~~~~~~~~~~i~g~~~  163 (233)
                      +.|++...+||+++.+-+|.+-+.   ..-+-+++++.-..       .+-+     .|.|-.+.+.++|...
T Consensus         2 ~~~~i~~~vNG~~~~~~~~~~~~L---l~~LR~~l~ltg~K-------~gC~-----~G~CGACtVlvdG~~v   59 (81)
T d1t3qa2           2 QLMRISATINGKPRVFYVEPRMHL---ADALREVVGLTGTK-------IGCE-----QGVCGSCTILIDGAPM   59 (81)
T ss_dssp             CCEEEEEEETTEEEEEEECTTSBH---HHHHHHTTCCTTSC-------CSCS-----SSSSCTTEEEETTEEE
T ss_pred             CeEEEEEEECCEEEEEecCCCCCH---HHHHhhhhCCcccc-------cCCC-----CcccCeeEEEECCCEE
Confidence            578999999999999888776543   23333445654211       1111     3556666777777543


No 59 
>g1htr.1 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens), progastricsin (pepsinogen C) [TaxId: 9606]}
Probab=28.81  E-value=20  Score=28.17  Aligned_cols=88  Identities=20%  Similarity=0.249  Sum_probs=50.7

Q ss_pred             eEEEEEeeCC--eeEEEEEcCCCccccccHHH----HHHhCCccC---------CCceeEEEEcCCceeccCCceeceeE
Q 039109           92 TMRLQSSISK--ASLTILIDSGSTHNFLHHKF----AKITGLKSE---------PGCLLSVVVANGEKLTSPGRCKGVQL  156 (233)
Q Consensus        92 t~~v~~~i~~--~~~~~LiDSGAt~nfIs~~~----a~~l~l~~~---------~~~~~~v~~a~G~~~~~~~~~~~~~~  156 (233)
                      ...+...|+.  +++.+++||||+..++.-.-    .....-.-.         ......+..++|..   .|....-.+
T Consensus        56 ~Y~~~i~iGtP~q~~~~~~DTGS~~~Wv~~~~C~~~~~~~~~~y~~~~Sst~~~~~~~~~i~Yg~Gs~---~G~~~~d~v  132 (372)
T g1htr.1          56 AYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSL---TGFFGYDTL  132 (372)
T ss_dssp             CEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE---EEEEEEEEE
T ss_pred             eEEEEEEEcCCCeEEEEEEeCCCCceeeccCCCCCccccCCCCCCccccCccccCCceeEEecCCeEE---EEEEEeeee
Confidence            4566777774  88999999999988874321    111110000         11356666777642   344445567


Q ss_pred             eecceeEE-EEEEEee--------cCCCccccchh
Q 039109          157 QLQGTQIE-AYFYLLS--------LEGCDAVLGAQ  182 (233)
Q Consensus       157 ~i~g~~~~-~~~~Vl~--------l~~~d~ILG~d  182 (233)
                      .+++.... ..|.+..        ....|.|+|+.
T Consensus       133 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~Gl~  167 (372)
T g1htr.1         133 TVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLA  167 (372)
T ss_dssp             EETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECC
T ss_pred             eeccceeCceEEEEEEeccccccccccccCccccc
Confidence            77776554 3343332        12468899864


No 60 
>d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.59  E-value=49  Score=20.03  Aligned_cols=43  Identities=9%  Similarity=0.190  Sum_probs=36.6

Q ss_pred             ccCCeEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccC
Q 039109           88 QSPQTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSE  130 (233)
Q Consensus        88 ~~~~t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~  130 (233)
                      +++++|++.++..+....+=||..+|..-+-..++++.+.++.
T Consensus         6 ~~~~~i~v~Vk~~~~~~~i~v~~~~tV~~lK~~I~~~~~v~~~   48 (83)
T d1wx8a1           6 PSSRIIRVSVKTPQDCHEFFLAENSNVRRFKKQISKYLHCNAD   48 (83)
T ss_dssp             CCSCEEEEEEECSSSEEEEEEETTCCHHHHHHHHHHHTCSCTT
T ss_pred             CCCCeEEEEEEcCCCcEEEEECCCChHHHHHHHHHHHhCCChh
Confidence            4567888888887777888889999999999999999998864


No 61 
>d1uj4a1 c.124.1.4 (A:3-131,A:206-227) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Thermus thermophilus [TaxId: 274]}
Probab=28.31  E-value=7.6  Score=27.21  Aligned_cols=24  Identities=17%  Similarity=0.191  Sum_probs=20.3

Q ss_pred             EEEEcCCCccccccHHHHHHhCCc
Q 039109          105 TILIDSGSTHNFLHHKFAKITGLK  128 (233)
Q Consensus       105 ~~LiDSGAt~nfIs~~~a~~l~l~  128 (233)
                      .+.+|||+|..++.+.++.++...
T Consensus        23 ~I~LdsGTT~~~la~~l~~~~~~~   46 (151)
T d1uj4a1          23 VVGLGTGSTARYAVLELARRLREG   46 (151)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHTT
T ss_pred             EEEECchHHHHHHHHHHHHHHhhc
Confidence            478999999999999998877654


No 62 
>d1lp1a_ a.8.1.1 (A:) Immunoglobulin-binding protein A modules {Staphylococcus aureus [TaxId: 1280]}
Probab=28.15  E-value=14  Score=20.90  Aligned_cols=32  Identities=25%  Similarity=0.293  Sum_probs=24.3

Q ss_pred             HHHHHHHHHHHHhCCCChHHHHHHhhcCCchhhh
Q 039109            4 EYQTRFERLLARAGHLTDKQEAECFISGLKDGLR   37 (233)
Q Consensus         4 eY~~~Fe~L~~~~~~l~~~~~~~~F~~GL~~~ir   37 (233)
                      |-...|-++++ ++.|++++. .-||..|++|=+
T Consensus         5 e~~~Af~ei~~-lPNLn~~Qr-n~fIqSLkDDPS   36 (55)
T d1lp1a_           5 ELSVAGREIVT-LPNLNDPQK-KAFIFSLWDDPS   36 (55)
T ss_dssp             HHHHHHHHHHT-CTTSCHHHH-HHHHHHHHHCGG
T ss_pred             HHHHHHHHHHh-CCCCCHHHH-HHHHHHhccChh
Confidence            44567777776 799999887 569999988644


No 63 
>d1wgga_ d.15.1.1 (A:) Ubiquitin carboxyl-terminal hydrolase 14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.54  E-value=67  Score=20.04  Aligned_cols=46  Identities=7%  Similarity=0.167  Sum_probs=38.4

Q ss_pred             ccccCCeEEEEEeeCCeeE-EEEEcCCCccccccHHHHHHhCCccCC
Q 039109           86 RVQSPQTMRLQSSISKASL-TILIDSGSTHNFLHHKFAKITGLKSEP  131 (233)
Q Consensus        86 g~~~~~t~~v~~~i~~~~~-~~LiDSGAt~nfIs~~~a~~l~l~~~~  131 (233)
                      |.+....+.|.++.++... .+=||..+|..-+-..+....+.++..
T Consensus         1 g~s~s~~~~I~VK~~~~~~~~v~v~~~~tV~~lK~~i~~~~gvp~~~   47 (96)
T d1wgga_           1 GSSGSSGYSVTVKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPAR   47 (96)
T ss_dssp             CCSCCCEEEEEEEETTEEEEEEEEESSSCHHHHHHHHHHHTCCCTTT
T ss_pred             CCCCCCceEEEEEeCCCCEEEEEECCCCcHHHHHHHhhhhcCcccee
Confidence            4567789999999877664 688999999999999999999988653


No 64 
>d1t2sa_ b.34.14.1 (A:) Argonaute 2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.53  E-value=7.7  Score=26.53  Aligned_cols=34  Identities=24%  Similarity=0.374  Sum_probs=20.0

Q ss_pred             hHHHHHHHH--HHHHHhCCC-ChHHHHHHhhcCCchh
Q 039109            2 VSEYQTRFE--RLLARAGHL-TDKQEAECFISGLKDG   35 (233)
Q Consensus         2 V~eY~~~Fe--~L~~~~~~l-~~~~~~~~F~~GL~~~   35 (233)
                      |-||+++|.  ........+ .+...++.|+.||+=+
T Consensus         7 Viefl~~~~~~~~i~~~~~~d~~r~ki~~~LKGlkV~   43 (123)
T d1t2sa_           7 MIEYLERFSLKAKINNTTNLDYSRRFLEPFLRGINVV   43 (123)
T ss_dssp             HHHHHHHHTTSSCCSTTCCCSTTHHHHHHHHTTEEEE
T ss_pred             HHHHHHHHcccccccccccchHHHHHHHHHhCCCEEE
Confidence            678888883  111111222 3445789999997644


No 65 
>d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=23.53  E-value=68  Score=18.73  Aligned_cols=39  Identities=10%  Similarity=0.170  Sum_probs=33.1

Q ss_pred             eEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccC
Q 039109           92 TMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSE  130 (233)
Q Consensus        92 t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~  130 (233)
                      +|.+.++-++..+.+=||...|..-+-..+..+.|.|+.
T Consensus         1 si~I~Vk~~~~~~~i~v~~~~tV~~lK~~I~~~~gip~~   39 (73)
T d2bwfa1           1 SLNIHIKSGQDKWEVNVAPESTVLQFKEAINKANGIPVA   39 (73)
T ss_dssp             EEEEEEEETTEEEEEEECTTCBHHHHHHHHHHHHCCCGG
T ss_pred             CEEEEEEeCCeEEEEEECCCChHHHHHHHHHHHHCcChH
Confidence            577788888888888899999999999999999998753


No 66 
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]}
Probab=22.18  E-value=14  Score=29.19  Aligned_cols=69  Identities=13%  Similarity=0.230  Sum_probs=37.9

Q ss_pred             EEEEeeC--CeeEEEEEcCCCccccccHHHHHHhCCcc----CC---------CceeEEEEcCCceeccCCceeceeEee
Q 039109           94 RLQSSIS--KASLTILIDSGSTHNFLHHKFAKITGLKS----EP---------GCLLSVVVANGEKLTSPGRCKGVQLQL  158 (233)
Q Consensus        94 ~v~~~i~--~~~~~~LiDSGAt~nfIs~~~a~~l~l~~----~~---------~~~~~v~~a~G~~~~~~~~~~~~~~~i  158 (233)
                      .....|+  .+++.+++||||+..+|...-+...++..    .+         ...+.+..++|.   +.|....=.+.+
T Consensus        63 ~~~I~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~c~~~~~y~~~~SsT~~~~~~~~~~~y~~G~---~~G~~~~D~v~i  139 (373)
T d1miqa_          63 YGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSIKNLYDSSKSKSYEKDGTKVDITYGSGT---VKGFFSKDLVTL  139 (373)
T ss_dssp             ECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGGSCCBCGGGCTTCEEEEEEEEEEETTEE---EEEEEEEEEEEE
T ss_pred             EEEEEECCCCEEEEEEEECCchheEEECCCCCCccccCCCccCCCCCCceeECCccEEEEeCCcE---EEEEEEEEEEEE
Confidence            3344565  57889999999999998543221111110    00         123455555553   234444456777


Q ss_pred             cceeEEE
Q 039109          159 QGTQIEA  165 (233)
Q Consensus       159 ~g~~~~~  165 (233)
                      ++.....
T Consensus       140 g~~~~~~  146 (373)
T d1miqa_         140 GHLSMPY  146 (373)
T ss_dssp             TTEEEEE
T ss_pred             cCcceEe
Confidence            7765543


No 67 
>d1lk5a1 c.124.1.4 (A:1-130,A:211-229) D-ribose-5-phosphate isomerase (RpiA), catalytic domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=21.92  E-value=11  Score=26.27  Aligned_cols=25  Identities=16%  Similarity=0.191  Sum_probs=21.3

Q ss_pred             EEEEcCCCccccccHHHHHHhCCcc
Q 039109          105 TILIDSGSTHNFLHHKFAKITGLKS  129 (233)
Q Consensus       105 ~~LiDSGAt~nfIs~~~a~~l~l~~  129 (233)
                      .+.+|+|+|..++-+.+..+..+..
T Consensus        23 ~I~ldsGTT~~~la~~L~~~~~~~v   47 (149)
T d1lk5a1          23 VIGLGTGSTTAYFIKLLGEKLKRGE   47 (149)
T ss_dssp             EEEECCSHHHHHHHHHHHHHHHTTS
T ss_pred             EEEECCccHHHHHHHHHHHhhcccc
Confidence            4789999999999999998876654


No 68 
>d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.00  E-value=55  Score=19.58  Aligned_cols=38  Identities=21%  Similarity=0.208  Sum_probs=32.5

Q ss_pred             EEEEEe-eCCeeEEEEEcCCCccccccHHHHHHhCCccC
Q 039109           93 MRLQSS-ISKASLTILIDSGSTHNFLHHKFAKITGLKSE  130 (233)
Q Consensus        93 ~~v~~~-i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~  130 (233)
                      |.|.++ .+|+.+.+=|+..+|..-+-..++.+.|+|+.
T Consensus         3 M~I~Vk~~~g~t~~l~v~~~~tV~~lK~~i~~~~gip~~   41 (78)
T d2zeqa1           3 MIVFVRFNSSYGFPVEVDSDTSILQLKEVVAKRQGVPAD   41 (78)
T ss_dssp             EEEEEESSSSSCEEEEECTTCBHHHHHHHHHHHHTCCGG
T ss_pred             eEEEEEcCCCCEEEEEEcccccHHHHHHHHHHHHCcChh
Confidence            566676 57788999999999999999999999998853


No 69 
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.36  E-value=81  Score=19.26  Aligned_cols=49  Identities=10%  Similarity=0.106  Sum_probs=37.6

Q ss_pred             ccCCeEEEEEeeCCeeEEEEEcCCCccccccHHHHHHhCCccCCCceeEEEEcC
Q 039109           88 QSPQTMRLQSSISKASLTILIDSGSTHNFLHHKFAKITGLKSEPGCLLSVVVAN  141 (233)
Q Consensus        88 ~~~~t~~v~~~i~~~~~~~LiDSGAt~nfIs~~~a~~l~l~~~~~~~~~v~~a~  141 (233)
                      +..+++++++..++-...+.+.+..+..=+-.++++++++.     ++.++.-+
T Consensus         8 ~~~~~ikVKv~~~~D~~~~~l~~~it~~dL~~kI~~rf~~~-----~~~lkY~D   56 (85)
T d1ip9a_           8 SGLKTTKIKFYYKDDIFALMLKGDTTYKELRSKIAPRIDTD-----NFKLQTKL   56 (85)
T ss_dssp             CCCCCEEEEECBTTCCEEEEECSCCCHHHHHHHHHHHHTSS-----CEEEEECC
T ss_pred             CCCCCEEEEEEECCcEEEEEeCCCCCHHHHHHHHHHHhCCC-----ceEEEEEc
Confidence            45678999999999999999988777666778888888643     45666543


Done!