Query 039112
Match_columns 467
No_of_seqs 152 out of 1222
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 10:29:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039112.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039112hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 8.9E-84 3E-88 665.8 46.1 422 16-459 5-437 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 5.2E-73 1.8E-77 582.3 36.1 404 17-459 3-412 (421)
3 2xr7_A Malonyltransferase; xen 100.0 2.2E-73 7.4E-78 590.9 33.1 424 18-459 1-447 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 8.7E-73 3E-77 586.4 28.6 420 17-459 5-447 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 5.7E-66 1.9E-70 535.1 35.6 401 40-460 4-443 (451)
6 1q9j_A PAPA5, polyketide synth 99.2 1.4E-09 4.8E-14 110.2 23.2 290 39-363 6-313 (422)
7 4hvm_A Tlmii; PSI-biology, mid 98.6 7.4E-07 2.5E-11 92.2 15.7 288 39-362 12-326 (493)
8 2jgp_A Tyrocidine synthetase 3 98.6 3.8E-06 1.3E-10 87.4 21.1 254 77-362 131-399 (520)
9 1l5a_A Amide synthase, VIBH; n 98.4 1.6E-05 5.3E-10 80.6 20.7 255 77-363 33-304 (436)
10 2xhg_A Tyrocidine synthetase A 98.4 2E-05 7E-10 80.5 19.6 295 39-364 16-336 (466)
11 2vsq_A Surfactin synthetase su 98.2 1.2E-05 4E-10 93.2 16.5 263 77-363 47-327 (1304)
12 3fot_A 15-O-acetyltransferase; 98.0 0.00073 2.5E-08 70.1 22.4 268 76-363 72-399 (519)
13 3cla_A Type III chloramphenico 67.9 3.4 0.00012 37.1 3.3 45 159-203 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 66.6 3.7 0.00013 37.0 3.3 44 159-202 171-216 (217)
15 1q23_A Chloramphenicol acetylt 65.9 3.9 0.00013 36.9 3.3 44 160-203 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 64.9 4.7 0.00016 36.8 3.7 29 175-203 204-232 (239)
17 3rqc_A Probable lipoamide acyl 63.0 4 0.00014 36.9 2.8 29 175-203 187-215 (224)
18 1scz_A E2, dihydrolipoamide su 61.7 5.1 0.00018 36.4 3.3 29 175-203 196-224 (233)
19 1dpb_A Dihydrolipoyl-transacet 61.3 5.2 0.00018 36.7 3.3 29 175-203 208-236 (243)
20 2ii3_A Lipoamide acyltransfera 59.8 5.7 0.0002 36.8 3.3 29 175-203 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 53.9 8.2 0.00028 35.6 3.3 29 175-203 210-238 (256)
22 3l60_A Branched-chain alpha-ke 52.4 9 0.00031 35.2 3.3 29 175-203 205-233 (250)
23 2xl1_A Arginine attenuator pep 40.0 17 0.00059 19.7 1.8 19 278-296 6-24 (26)
24 3dva_I Dihydrolipoyllysine-res 34.9 8.1 0.00028 38.6 0.0 29 175-203 391-419 (428)
25 4hhu_A OR280; engineered prote 28.8 51 0.0017 26.1 3.6 35 78-112 93-128 (170)
26 2kl8_A OR15; structural genomi 28.5 40 0.0014 23.5 2.6 35 78-112 11-46 (85)
27 4hhu_A OR280; engineered prote 23.7 53 0.0018 25.9 2.9 35 78-112 12-47 (170)
28 1x93_A Hypothetical protein HP 20.6 66 0.0022 21.1 2.3 23 254-276 2-24 (55)
29 1baz_A ARC repressor; transcri 20.4 2E+02 0.0067 19.1 5.2 44 251-297 5-48 (53)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=8.9e-84 Score=665.78 Aligned_cols=422 Identities=30% Similarity=0.578 Sum_probs=364.2
Q ss_pred eeeEEEEeeeEEecCCCCCCCCCCeeeCCcccccccccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCC
Q 039112 16 EIPLAIHQLVRIMPAAAIPAAPGDTLYLSNLDDIIGARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYP 95 (467)
Q Consensus 16 ~~~v~i~~~~~V~P~~~~~~~~~~~~~Ls~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 95 (467)
+|+|+|.++++|+|+.|+|.+ .++||+||++++. .|++.++||+.++.. ....+++||+||+++|++|||
T Consensus 5 ~~~V~i~~~~~V~P~~~tp~~---~~~LS~lD~~~~~-~~~~~~~~y~~~~~~------~~~~~~~Lk~sLs~~L~~f~p 74 (439)
T 4g22_A 5 SMKIEVKESTMVRPAQETPGR---NLWNSNVDLVVPN-FHTPSVYFYRPTGSS------NFFDAKVLKDALSRALVPFYP 74 (439)
T ss_dssp -CCEEEEEEEEECCSSCCCCC---EECCCHHHHSCCT-TCCCEEEEECCCSCT------TTTCHHHHHHHHHHHTTTTGG
T ss_pred ceEEEEeeeEEEeCCCCCCCC---eecCChhHhCccc-cceeeEEEEcCCCCc------cccHHHHHHHHHHHHHhhccc
Confidence 478999999999999999877 9999999999775 999999999975332 335689999999999999999
Q ss_pred CCceeeecCCCcEEEEeeCCCCeeEEEEEccCchhhhCCCCCCCccccccccCCCCCCCCccCCcceeeeeeeeeecCeE
Q 039112 96 LSARLRENHNGKLEVFFGPDQGALMVEARSETVLAELGDLAVPNPAWAPLIYKFPNEEPYKILDMPLVIAQVTVFSCGGF 175 (467)
Q Consensus 96 LaGrl~~~~~G~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~p~~~~~~~~~~P~l~vQvt~f~~GG~ 175 (467)
|||||+.+++|+++|+| |++||.|+|+++|.+++|+++.. |...+.+|+|..+... +..+.|++.+|||+|+|||+
T Consensus 75 lAGRl~~~~~g~~~i~c-~~~Gv~fv~A~~d~~l~~l~~~~-p~~~~~~l~p~~~~~~--~~~~~pll~vQvT~f~cGG~ 150 (439)
T 4g22_A 75 MAGRLKRDEDGRIEIEC-NGEGVLFVEAESDGVVDDFGDFA-PTLELRRLIPAVDYSQ--GISSYALLVLQVTYFKCGGV 150 (439)
T ss_dssp GGCEEEECTTSCEEEEC-CCCCEEEEEEEESSCGGGGTTCC-CCGGGGGGSCCCCTTS--CTTSSCSEEEEEEECTTSCE
T ss_pred cceeeeeCCCCCEEEEE-CCCCCEEEEEEcCCcHHHhcCCC-CCHHHHhcCCCCCccc--ccccCceeEEEEEEecCCCE
Confidence 99999999889999999 99999999999999999998654 6666778888665432 34578999999999999999
Q ss_pred EEEccccccccchhhHHHHHHHHHHHhccCCCCCCCCCCCccccccCCCCCCCCCCCcccccccCCCCcccc--cc-CCC
Q 039112 176 SLGLRLCHCICDGFGAMQFLSAWAATAKAGRLVVNPQPCWEREFFRPRHPPIIKHPHIEYMRIDEGSNLTMT--LW-QAK 252 (467)
Q Consensus 176 iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~G~~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~-~~~ 252 (467)
+||+++||.++||.|+.+|+++||++|| |.+.+.. |++||+++.+++||...++|.+|...+....+... .. ..+
T Consensus 151 ~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r-g~~~~~~-P~~dr~~l~~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (439)
T 4g22_A 151 SLGVGMRHHAADGFSGLHFINSWSDMAR-GLDVTLP-PFIDRTLLRARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPE 228 (439)
T ss_dssp EEEEEECTTTCCHHHHHHHHHHHHHHHT-TCCCSSC-CBCCGGGGCCCSSCCCSSCCGGGSCCC---------------C
T ss_pred EEEEEeeeccCcHHHHHHHHHHHHHHhC-CCCCCCC-CccccccccCCCCCCCCcCcccccCCCCCcccccccccCCccc
Confidence 9999999999999999999999999999 9776666 99999999888888776777887655433211100 11 157
Q ss_pred ceEEEEEeCHHHHHHHHHHhCCCC-CCCcchHHHHHHHHHHHHHhhcCCCCCCceeEEEEEeeccCCCCCCCCCCCcccc
Q 039112 253 PIQKCYRISRKFQAHLKNLAQPDD-NFPCTSFDAMAAHIWRSWVRAIDVQPPNYKLRLTFSVNARQKLKNPPLKDGFYGN 331 (467)
Q Consensus 253 ~~~~~f~f~~~~l~~Lk~~~~~~~-~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN 331 (467)
+..++|+|++++|++||+++.++. ..++|++|+|+||+|+|++|||+. ++++.+++.++||+|+|+ +||+|++|+||
T Consensus 229 ~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~-~~~~~~~l~~~vd~R~rl-~Pplp~~Y~GN 306 (439)
T 4g22_A 229 TAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGL-EVDQGTKLYIATDGRARL-RPSLPPGYFGN 306 (439)
T ss_dssp EEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTC-CTTCEEEEEEEEECTTTS-SSCCCTTBCSC
T ss_pred ceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCC-CCCCcEEEEEEEcccCCC-CCCCCCCcccc
Confidence 899999999999999999998653 468999999999999999999988 788999999999999999 99999999999
Q ss_pred ceEEEeeeccHHHHhhccHHHHHHHHHHHHhcCCHHHHHHHhhhHHhhcCCc-------ccCCCcEEEeecCCCCcccce
Q 039112 332 VVCVACAMSSVNELVNGQLKYTTRLVREARLGVSEDYLRSTVDFVEVERPRR-------LEFGGKLTITQWTRFSIYESA 404 (467)
Q Consensus 332 ~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~tsw~~~~~~~~~ 404 (467)
++..+.+.++++||.+.+|+++|.+||++++++|++++++.++|++..++.. .....++.+|||++++ +|++
T Consensus 307 ~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~-~y~~ 385 (439)
T 4g22_A 307 VIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLP-IHDA 385 (439)
T ss_dssp CEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSC-TTCC
T ss_pred eeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCC-cccc
Confidence 9999999999999999999999999999999999999999999998654321 1115689999999999 9999
Q ss_pred eecCCcceeeccCcccCCCcEEEEccCCCCCCCCcEEEEEEcCHHHHHHHHHHhc
Q 039112 405 DFGWGRPIYAGPIDLTPTPQVCVFLPEGEADPNGNMVVCICLPESATEKFIEFLC 459 (467)
Q Consensus 405 DFG~G~P~~v~~~~~~~~~g~~~ilp~~~~~~~g~~ev~v~L~~~~m~~l~~~~~ 459 (467)
|||||+|+++++... +.+|.++++|.+.+ +||++|.|||++++|++|+++++
T Consensus 386 DFGwGkP~~~~~~~~-~~~g~~~~~p~~~~--~ggi~v~v~L~~~~m~~f~~~~~ 437 (439)
T 4g22_A 386 DFGWGRPIFMGPGGI-AYEGLSFILPSPTN--DGSMSVAISLQGEHMKLFQSFLY 437 (439)
T ss_dssp CCSSCCCSEEEESSC-CSTTEEEEEECTTC--SSCEEEEEEEEHHHHHHHHHHHT
T ss_pred ccCCCCcceeecccc-CCCcEEEEeecCCC--CCcEEEEEECCHHHHHHHHHHhc
Confidence 999999999998755 57899999998654 44999999999999999999886
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=5.2e-73 Score=582.28 Aligned_cols=404 Identities=20% Similarity=0.321 Sum_probs=329.6
Q ss_pred eeEEEEeeeEEecCCCCCCCCCCeeeCCcccccccccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCC
Q 039112 17 IPLAIHQLVRIMPAAAIPAAPGDTLYLSNLDDIIGARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPL 96 (467)
Q Consensus 17 ~~v~i~~~~~V~P~~~~~~~~~~~~~Ls~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 96 (467)
|+|+|.++++|+|+.|+|.+ .+.++||+||++++. .|++.++||+.++... .+...++++||+||+++|++||+|
T Consensus 3 m~v~v~~~~~V~P~~ptp~~-~~~~~LS~lD~~~~~-~~~~~~~~y~~~~~~~---~~~~~~~~~Lk~sLs~~L~~~~pl 77 (421)
T 2bgh_A 3 PQMEKVSEELILPSSPTPQS-LKCYKISHLDQLLLT-CHIPFILFYPNPLDSN---LDPAQTSQHLKQSLSKVLTHFYPL 77 (421)
T ss_dssp -CEEEEEEEEEECSSCCCTT-SCCCBCCHHHHTSCS-SEEEEEEEECCCSSCC---CCHHHHHHHHHHHHHHHTTTSGGG
T ss_pred ceEEEeeeEEEeCCCCCCCC-CcccCCChHHhcccc-cccceEEEEeCCCccc---cchhhHHHHHHHHHHHHhhhcchh
Confidence 78999999999999988753 468999999998765 9999999999753210 013468999999999999999999
Q ss_pred CceeeecCCCcEEEEeeCCCCeeEEEEEccCchhhhCCCCCCCccccccccCCCCCC-CCccCCcceeeeeeeeeecCeE
Q 039112 97 SARLRENHNGKLEVFFGPDQGALMVEARSETVLAELGDLAVPNPAWAPLIYKFPNEE-PYKILDMPLVIAQVTVFSCGGF 175 (467)
Q Consensus 97 aGrl~~~~~G~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~p~~~-~~~~~~~P~l~vQvt~f~~GG~ 175 (467)
||||+. +++|+| |++||.|+++++|++++++.+..++...+.+|+|..+... ++...+.|++.+|||+|+|||+
T Consensus 78 AGRl~~----~~~i~c-~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~ 152 (421)
T 2bgh_A 78 AGRINV----NSSVDC-NDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGT 152 (421)
T ss_dssp GSEEET----TTEEEC-CCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCE
T ss_pred ccccCC----CcEEEE-cCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCE
Confidence 999962 699999 9999999999999999999653222234567777442110 0114568999999999999999
Q ss_pred EEEccccccccchhhHHHHHHHHHHHhccCCCCCCCCCCCcc-ccccC--CCCCCCCCCCcccccccCCCCccccccCCC
Q 039112 176 SLGLRLCHCICDGFGAMQFLSAWAATAKAGRLVVNPQPCWER-EFFRP--RHPPIIKHPHIEYMRIDEGSNLTMTLWQAK 252 (467)
Q Consensus 176 iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~G~~~~~~~P~~dr-~~l~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (467)
+||+++||.++||.|+.+|+++||+++| |.+.... |.+|| +.+.+ ++++. +. ....++
T Consensus 153 ~lg~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~~~~~-P~~dr~~~l~p~~~~~~~-----------~~------~~~~~~ 213 (421)
T 2bgh_A 153 AIGVNLSHKIADVLSLATFLNAWTATCR-GETEIVL-PNFDLAARHFPPVDNTPS-----------PE------LVPDEN 213 (421)
T ss_dssp EEEEEEETTTCCHHHHHHHHHHHHHHHT-TCSCCCC-CBCSHHHHHSCCCTTCCC-----------CC------CCCCSS
T ss_pred EEEEEeeEEechHHHHHHHHHHHHHHhc-CCCCCCC-CccccccccCCCcccCCC-----------Cc------cCCccc
Confidence 9999999999999999999999999999 8654455 89999 65542 11111 00 012356
Q ss_pred ceEEEEEeCHHHHHHHHHHhCCCCC-CCcchHHHHHHHHHHHHHhhcCCC-CCCceeEEEEEeeccCCCCCCCCCCCccc
Q 039112 253 PIQKCYRISRKFQAHLKNLAQPDDN-FPCTSFDAMAAHIWRSWVRAIDVQ-PPNYKLRLTFSVNARQKLKNPPLKDGFYG 330 (467)
Q Consensus 253 ~~~~~f~f~~~~l~~Lk~~~~~~~~-~~~St~d~l~A~lW~~~~rAr~~~-~~~~~~~l~~~vd~R~rl~~p~lp~~Y~G 330 (467)
+..++|+|++++|++||+++.++.. .++|+||+|+||+|+|++|||+.. ++++.+.+.++||+|+|+ +||+|++|+|
T Consensus 214 ~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl-~pplP~~y~G 292 (421)
T 2bgh_A 214 VVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRM-NPPLPHYAMG 292 (421)
T ss_dssp EEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGS-SSCCCTTBCS
T ss_pred eEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCcccc-CCCCCCCccc
Confidence 8899999999999999999987653 689999999999999999998641 246789999999999999 9999999999
Q ss_pred cceEEEeeeccHHHHhhccHHHHHHHHHHHHhcCCHHHHHHHhhhHHhhcCCcccCCCcEEEeecCCCCcccceeecCCc
Q 039112 331 NVVCVACAMSSVNELVNGQLKYTTRLVREARLGVSEDYLRSTVDFVEVERPRRLEFGGKLTITQWTRFSIYESADFGWGR 410 (467)
Q Consensus 331 N~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~~~~~DFG~G~ 410 (467)
|++..+.+.+++++ +.+|+++|..||+++.++|++++++..++.+.....+ ....+.+|||++++ +|++|||||+
T Consensus 293 N~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vssw~~~~-~y~~DFGwGk 367 (421)
T 2bgh_A 293 NIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCLYELE--PQELLSFTSWCRLG-FYDLDFGWGK 367 (421)
T ss_dssp CCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHHHTSC--GGGEEEEEEETTSC-GGGCCSSSCC
T ss_pred eEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCeEEEeccccCC-CcccccCCCc
Confidence 99999998888876 7899999999999999999999998887765432211 12479999999999 9999999999
Q ss_pred ceeeccCcccCCCcEEEEccCCCCCCCCcEEEEEEcCHHHHHHHHHHhc
Q 039112 411 PIYAGPIDLTPTPQVCVFLPEGEADPNGNMVVCICLPESATEKFIEFLC 459 (467)
Q Consensus 411 P~~v~~~~~~~~~g~~~ilp~~~~~~~g~~ev~v~L~~~~m~~l~~~~~ 459 (467)
|.++++... +.+|.++++|.+. ++ |++|.|+|++++|++|++++.
T Consensus 368 P~~v~~~~~-~~~g~~~~~p~~~-~~--gi~v~v~L~~~~m~~f~~e~~ 412 (421)
T 2bgh_A 368 PLSACTTTF-PKRNAALLMDTRS-GD--GVEAWLPMAEDEMAMLPVELL 412 (421)
T ss_dssp CSEEECCCC-CSTTEEEEEECTT-SS--SEEEEEEEEHHHHHHSCHHHH
T ss_pred cCeeccccc-CcCCEEEEEecCC-CC--eEEEEEEcCHHHHHHHHHHHH
Confidence 999998765 5689999998764 34 899999999999999999776
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=2.2e-73 Score=590.94 Aligned_cols=424 Identities=18% Similarity=0.285 Sum_probs=335.2
Q ss_pred eEEEEeeeEEecCCCCCCCCCCeeeCCcccccccccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCCC
Q 039112 18 PLAIHQLVRIMPAAAIPAAPGDTLYLSNLDDIIGARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPLS 97 (467)
Q Consensus 18 ~v~i~~~~~V~P~~~~~~~~~~~~~Ls~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 97 (467)
+|+|.++++|+|+.++++ .+.++||+||+.+....|++.++||+.+...+ .+.+..+++||+||+++|++||+||
T Consensus 1 ~v~v~~~~~V~P~~~~~~--~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~---~~~~~~~~~Lk~sLs~~L~~~~plA 75 (453)
T 2xr7_A 1 MASVIEQCQVVPSPGSAT--ELTLPLTYFDHVWLAFHRMRRILFYKLPISRP---DFVQTIIPTLKDSLSLTLKYYLPLA 75 (453)
T ss_dssp -CEEEEESCCCCCTTCCS--EEEEECCHHHHGGGGSCCEEEEEEEECCCCSH---HHHHTHHHHHHHHHHHHHTTSGGGG
T ss_pred CeEEEEEEEecCCCCCCC--CceECCCHHHhhhhhcCCccEEEEEeCCCCCc---hhHHHHHHHHHHHHHHHhhhccccC
Confidence 389999999999987432 25999999999865436999999999653210 0012468999999999999999999
Q ss_pred ceeeecC--CCcEEEEeeC-CCCeeEEEEEccCchhhhCCCC-CCCccccccccCCCCCCC-CccCCcceeeeeeeeeec
Q 039112 98 ARLRENH--NGKLEVFFGP-DQGALMVEARSETVLAELGDLA-VPNPAWAPLIYKFPNEEP-YKILDMPLVIAQVTVFSC 172 (467)
Q Consensus 98 Grl~~~~--~G~~~i~~~~-~~gv~f~~a~~d~~~~~l~~~~-~p~~~~~~l~p~~p~~~~-~~~~~~P~l~vQvt~f~~ 172 (467)
|||+.++ +|+++|+| + ++||.|+++++|.+++++.+.. .|...+.+|+|..+.... +...+.|++.+|||+|+|
T Consensus 76 GRl~~~~~~~g~~~i~c-~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~c 154 (453)
T 2xr7_A 76 GNVACPQDWSGYPELRY-VTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPN 154 (453)
T ss_dssp SCCEEESSTTCCCEEEE-ETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETT
T ss_pred eeEEccCCCCCCEEEEe-cCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccC
Confidence 9999987 89999999 6 5999999999999999996422 344556678876543210 011238999999999999
Q ss_pred CeEEEEccccccccchhhHHHHHHHHHHHhccCC-C----CCCCCCCCccccccCCCCCCCCCCCcccc-cccCCCCccc
Q 039112 173 GGFSLGLRLCHCICDGFGAMQFLSAWAATAKAGR-L----VVNPQPCWEREFFRPRHPPIIKHPHIEYM-RIDEGSNLTM 246 (467)
Q Consensus 173 GG~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~G~-~----~~~~~P~~dr~~l~~~~~p~~~~~~~~~~-~~~~~~~~~~ 246 (467)
||++||+++||.++||.|+.+|+++||++||.|. + ..+. |++||+.+.. |+.....+.++. ..+.......
T Consensus 155 GG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~-P~~dr~~l~~--p~~~~~~~~~~~~~~~~~~~~~~ 231 (453)
T 2xr7_A 155 HGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFI-PFYDRSVIKD--PNGVGMSIWNEMKKYKHMMKMSD 231 (453)
T ss_dssp TEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGS-CBCCCSSSCC--SSCHHHHTTTTGGGCTTTSCCSC
T ss_pred CcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCC-CccccccccC--CCCcchHHHHhccccCCcccccc
Confidence 9999999999999999999999999999999443 2 2344 8999988763 222111111111 1011100000
Q ss_pred cccCCCceEEEEEeCHHHHHHHHHHhCCCCC--CCcchHHHHHHHHHHHHHhhcCCC----CCCceeEEEEEeeccCCCC
Q 039112 247 TLWQAKPIQKCYRISRKFQAHLKNLAQPDDN--FPCTSFDAMAAHIWRSWVRAIDVQ----PPNYKLRLTFSVNARQKLK 320 (467)
Q Consensus 247 ~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~--~~~St~d~l~A~lW~~~~rAr~~~----~~~~~~~l~~~vd~R~rl~ 320 (467)
.....+...++|+|++++|++||+++.++.. .++|+||+|+||+|+|++|||+.. ++++.+.+.++||+|+|+
T Consensus 232 ~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl- 310 (453)
T 2xr7_A 232 VVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQF- 310 (453)
T ss_dssp CCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCS-
T ss_pred ccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccC-
Confidence 0123567799999999999999999975432 589999999999999999999641 356789999999999999
Q ss_pred CCCCCCCccccceEEEeeeccHHHHhh-ccHHHHHHHHHHHHhc--CCHH-HHHHHhhhHHhhcCCcccCCCcEEEeecC
Q 039112 321 NPPLKDGFYGNVVCVACAMSSVNELVN-GQLKYTTRLVREARLG--VSED-YLRSTVDFVEVERPRRLEFGGKLTITQWT 396 (467)
Q Consensus 321 ~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~tsw~ 396 (467)
+||+|++|+||++..+.+.++++||.+ .+|+++|..||+++.+ ++++ ++++ +|++..+.. .....+.+|||+
T Consensus 311 ~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~~~~~~~--~~~~~~~vssw~ 386 (453)
T 2xr7_A 311 NPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWFKEYDKV--DAKRSLSVAGSP 386 (453)
T ss_dssp SSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTTSCCCCS--CGGGEEEECSCS
T ss_pred CCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHHHHHHhh--ccCCcEEEeccc
Confidence 999999999999999999999999994 8999999999999999 5788 9988 887754332 123589999999
Q ss_pred CCCcccceeecCCcceeeccCcccCCCc--EEEEccCCCCCCCCcEEEEEEcCHHHHHHHHHHhc
Q 039112 397 RFSIYESADFGWGRPIYAGPIDLTPTPQ--VCVFLPEGEADPNGNMVVCICLPESATEKFIEFLC 459 (467)
Q Consensus 397 ~~~~~~~~DFG~G~P~~v~~~~~~~~~g--~~~ilp~~~~~~~g~~ev~v~L~~~~m~~l~~~~~ 459 (467)
+|+ +|++|||||+|.++++... +.+| .++++|++.+ +||++|.|+|++++|++|++++.
T Consensus 387 ~~~-~y~~DFG~G~P~~v~~~~~-~~~g~~~~~l~~~~~~--~ggi~v~v~L~~~~m~~f~~~~~ 447 (453)
T 2xr7_A 387 KLD-LYAADFGWGRPEKLEFVSI-DNDDGISMSLSKSKDS--DGDLEIGLSLSKTRMNAFAAMFT 447 (453)
T ss_dssp SCC-GGGCCCSSCSCSEEEEGGG-SSCSSCEEEEEECSSS--TTCEEEEECCCHHHHHHHHHHHH
T ss_pred cCC-ccccccCCCcceEEEeeee-cCCCceEEEEeecCCC--CCCEEEEEEeCHHHHHHHHHHHH
Confidence 999 9999999999999997755 4678 7888887644 45999999999999999999886
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=8.7e-73 Score=586.42 Aligned_cols=420 Identities=18% Similarity=0.300 Sum_probs=326.9
Q ss_pred eeEEEEeeeEEecCCCCCCCCCCeeeCCcccccccccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCC
Q 039112 17 IPLAIHQLVRIMPAAAIPAAPGDTLYLSNLDDIIGARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPL 96 (467)
Q Consensus 17 ~~v~i~~~~~V~P~~~~~~~~~~~~~Ls~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~L 96 (467)
.+|+|.++++|+|+.++++ .+.++||+||+.+..+.|++.++||+.++..+ .+.+..+++||+||+++|++||+|
T Consensus 5 ~~v~v~~~~~V~P~~~~~~--~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~---~~~~~~~~~Lk~sLs~~L~~~~pl 79 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLG--DKSLQLTFFDFFWLRSPPINNLFFYELPITRS---QFTETVVPNIKHSLSITLKHFYPF 79 (454)
T ss_dssp -CEEEEEEEEECCCTTSCC--CEEEECCHHHHTTTTCCCEEEEEEEECCCCHH---HHHHTHHHHHHHHHHHHHTTCGGG
T ss_pred ceEEEEEEEEEeCCCCCCC--CceecCchHHhhhhccCCccEEEEEeCCCCcc---hhhHHHHHHHHHHHHHHhhhcccc
Confidence 6799999999999987432 25999999999865447999999999653210 001246899999999999999999
Q ss_pred Cceee-ec-CCCcEEEEeeC-CCCeeEEEEEccCchhhhCCCC-CCCccccccccCCCCCC-CCccCCcceeeeeeeeee
Q 039112 97 SARLR-EN-HNGKLEVFFGP-DQGALMVEARSETVLAELGDLA-VPNPAWAPLIYKFPNEE-PYKILDMPLVIAQVTVFS 171 (467)
Q Consensus 97 aGrl~-~~-~~G~~~i~~~~-~~gv~f~~a~~d~~~~~l~~~~-~p~~~~~~l~p~~p~~~-~~~~~~~P~l~vQvt~f~ 171 (467)
||||+ .+ ++|+++|+| | ++||.|+++++|.+++++.+.. .|...+.+|+|..+... .++..+.|++.+|||+|+
T Consensus 80 AGRl~~~~~~~g~~~i~c-~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~ 158 (454)
T 2e1v_A 80 VGKLVVYPAPTKKPEICY-VEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFP 158 (454)
T ss_dssp GSEEEECSSSSSCCEEEE-CTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEET
T ss_pred ceeeeeccCCCCCEEEEE-CCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEec
Confidence 99998 65 579999999 7 5999999999999999996422 23345667887654321 011244699999999999
Q ss_pred cCeEEEEccccccccchhhHHHHHHHHHHHhccCCC------CCCCCCCCccccccCCCCCCCCCCCc-ccccccC---C
Q 039112 172 CGGFSLGLRLCHCICDGFGAMQFLSAWAATAKAGRL------VVNPQPCWEREFFRPRHPPIIKHPHI-EYMRIDE---G 241 (467)
Q Consensus 172 ~GG~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~G~~------~~~~~P~~dr~~l~~~~~p~~~~~~~-~~~~~~~---~ 241 (467)
|||++||+++||.++||.|+.+|+++||++||.|.. ..+. |++|| ++. +|+ ....+. .+..... .
T Consensus 159 cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~-P~~dr-~l~--~p~-~~~~~~~~~~~~~~~~~~ 233 (454)
T 2e1v_A 159 NQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTR-PLYDR-IIK--YPM-LDEAYLKRAKVESFNEDY 233 (454)
T ss_dssp TTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCC-CBCCC-CCC--CHH-HHHHHHHHTTCTTHHHHC
T ss_pred CCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCC-Ccccc-cCC--CCC-cchHHHHhhhcccccccc
Confidence 999999999999999999999999999999995442 1445 89999 764 232 111100 1100000 0
Q ss_pred CCccccccCCCceEEEEEeCHHHHHHHHHHhCCCCC--CCcchHHHHHHHHHHHHHhhcCCCCCCceeEEEEEeeccCCC
Q 039112 242 SNLTMTLWQAKPIQKCYRISRKFQAHLKNLAQPDDN--FPCTSFDAMAAHIWRSWVRAIDVQPPNYKLRLTFSVNARQKL 319 (467)
Q Consensus 242 ~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~--~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~l~~~vd~R~rl 319 (467)
... ......+...++|+|++++|++||+++.++.+ .++|+||+|+||+|+|++||| +++.+++.++||+|+|+
T Consensus 234 ~~~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar----~~~~~~l~~~vd~R~rl 308 (454)
T 2e1v_A 234 VTQ-SLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR----NDKLQLFGFPIDRRARM 308 (454)
T ss_dssp CCC-CCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH----CCSEEEEEEEEECGGGS
T ss_pred Ccc-cCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc----CCCceEEEEEecchhcc
Confidence 000 00023467799999999999999999975432 589999999999999999998 46789999999999999
Q ss_pred CCCCCCCCccccceEEEeeeccHHHHhh-ccHHHHHHHHHHHHhcCCHHH----HHH-HhhhHHhhcCCcccCCCcEEEe
Q 039112 320 KNPPLKDGFYGNVVCVACAMSSVNELVN-GQLKYTTRLVREARLGVSEDY----LRS-TVDFVEVERPRRLEFGGKLTIT 393 (467)
Q Consensus 320 ~~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~t 393 (467)
+||+|++|+||++..+.+.++++||.+ .+|+++|.+||+++.+++++| +++ ..+|++..+.. .....+.+|
T Consensus 309 -~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~vs 385 (454)
T 2e1v_A 309 -KPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMESFNDLVSEG--MPTTMTWVS 385 (454)
T ss_dssp -SSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-----CHHHHHC--CCSEEEEEE
T ss_pred -CCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHHhh--cCCceEEEe
Confidence 999999999999999999999999984 899999999999999987544 444 44555532211 123489999
Q ss_pred ecCCCCcccceeecCCcceeeccCcccCCCcEEEEccCCCCCCCCcEEEEEEcCHHHHHHHHHHhc
Q 039112 394 QWTRFSIYESADFGWGRPIYAGPIDLTPTPQVCVFLPEGEADPNGNMVVCICLPESATEKFIEFLC 459 (467)
Q Consensus 394 sw~~~~~~~~~DFG~G~P~~v~~~~~~~~~g~~~ilp~~~~~~~g~~ev~v~L~~~~m~~l~~~~~ 459 (467)
||++++ +|++|||||+|.++++... +.+|.++++|++.+ +||++|.|+|++++|++|++++.
T Consensus 386 sw~~~~-~y~~DFG~G~P~~v~~~~~-~~~g~~~l~p~~~~--~ggi~v~v~L~~~~m~~f~~~~~ 447 (454)
T 2e1v_A 386 GTPKLR-FYDMDFGWGKPKKLETVSI-DHNGAISINSCKES--NEDLEIGVCISATQMEDFVHIFD 447 (454)
T ss_dssp CCTTSC-GGGCCSSSCSCSEEEEGGG-GGSSEEEEEECSSC--TTSEEEEEEEEHHHHHHHHHHHH
T ss_pred cCCCCC-cccccccCccceEEEeeee-CCCCeEEEEecCCC--CCCEEEEEEECHHHHHHHHHHHH
Confidence 999999 9999999999999997665 45788889987654 45999999999999999999987
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=5.7e-66 Score=535.08 Aligned_cols=401 Identities=15% Similarity=0.199 Sum_probs=314.5
Q ss_pred eeeCCcccccc--cccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCCCceeeecC-----CCcEEEEe
Q 039112 40 TLYLSNLDDII--GARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPLSARLRENH-----NGKLEVFF 112 (467)
Q Consensus 40 ~~~Ls~lD~~~--~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-----~G~~~i~~ 112 (467)
.++||.|||++ +. .|++.++||+.++..+ ....+++||+||+++|++||||||||+.++ +|+++|+|
T Consensus 4 ~~~Ls~lD~~~~~~~-~y~~~~~~y~~~~~~~-----~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~ 77 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLS-IYTQISLLYPVSDSSQ-----YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVP 77 (451)
T ss_dssp CEECCGGGGCTTGGG-CEEEEEEEEECSCGGG-----HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEEC
T ss_pred cccCChhhcCccccc-cceeEEEEEECCCCCC-----HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEee
Confidence 57999999997 44 9999999999642211 345799999999999999999999999875 58999998
Q ss_pred eCCCCeeEEEEEccC-----chhhhCCCCCCCcccc--ccccC--CCCCC-CCccCCcceeeeeeeeeecCeEEEEcccc
Q 039112 113 GPDQGALMVEARSET-----VLAELGDLAVPNPAWA--PLIYK--FPNEE-PYKILDMPLVIAQVTVFSCGGFSLGLRLC 182 (467)
Q Consensus 113 ~~~~gv~f~~a~~d~-----~~~~l~~~~~p~~~~~--~l~p~--~p~~~-~~~~~~~P~l~vQvt~f~~GG~iLg~~~~ 182 (467)
++.+..|++++++. ++++|++...|...+. .+.|. .|... .....+.|++.+||| |.|||++||+++|
T Consensus 78 -~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~ 155 (451)
T 2rkv_A 78 -FEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQ 155 (451)
T ss_dssp -CCSSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEE
T ss_pred -cCCCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeeh
Confidence 66666699888764 6888864334543332 13332 22110 002345899999999 6799999999999
Q ss_pred ccccchhhHHHHHHHHHHHhccCCCCCC----CCCCCccccccC---CCCCCCCCCCcccccccCCCCccccccCCCceE
Q 039112 183 HCICDGFGAMQFLSAWAATAKAGRLVVN----PQPCWEREFFRP---RHPPIIKHPHIEYMRIDEGSNLTMTLWQAKPIQ 255 (467)
Q Consensus 183 H~v~Dg~g~~~fl~~wa~~~r~G~~~~~----~~P~~dr~~l~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (467)
|.++||.|+.+|+++||++|| |.+.+. . |++||+.+.+ +.+|.....+.+|...+..... .....++..
T Consensus 156 H~v~Dg~g~~~Fl~awa~~~r-g~~~~~~~~~~-p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 231 (451)
T 2rkv_A 156 HGAMDMVGQDAVIRLLSKACR-NDPFTEEEMTA-MNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDA--VLTPVSASW 231 (451)
T ss_dssp TTTCCHHHHHHHHHHHHHHHH-TCCCCHHHHHH-TTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC---------CCEEE
T ss_pred hccccHHHHHHHHHHHHHHhc-CCCCCcccccc-ccCchhhccccccccCCCccccccccCCCCCCCCC--CCCCCCceE
Confidence 999999999999999999999 875432 3 7899875443 2334333344444332211000 122356789
Q ss_pred EEEEeCHHHHHHHHHHhCCCC---CCCcchHHHHHHHHHHHHHhhc-C-CCCCCceeEEEEEeeccCCCCCCCCCCCccc
Q 039112 256 KCYRISRKFQAHLKNLAQPDD---NFPCTSFDAMAAHIWRSWVRAI-D-VQPPNYKLRLTFSVNARQKLKNPPLKDGFYG 330 (467)
Q Consensus 256 ~~f~f~~~~l~~Lk~~~~~~~---~~~~St~d~l~A~lW~~~~rAr-~-~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~G 330 (467)
++|+|++++|++||+++.++. ..++|+||+|+||+|||++||| . . ++++.+++.++||+|+|+ + +|.+|+|
T Consensus 232 ~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~-~~~~~~~l~~~vd~R~rl-~--lP~~y~G 307 (451)
T 2rkv_A 232 AFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERI-DGSAPTEFCRAVDARPAM-G--VSNNYPG 307 (451)
T ss_dssp EEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTS-CTTSEEEEEEEEECHHHH-T--CCTTCCS
T ss_pred EEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccC-CCCCceEEEEEecccccC-C--CCCCCcc
Confidence 999999999999999997654 3679999999999999999998 3 5 678899999999999999 4 8999999
Q ss_pred cceEEEeeeccHHHHhhccHHHHHHHHHHHHhcCCHHH-HHHHhhhHHhhcCCc-c------cCCCcEEEeecCCCCccc
Q 039112 331 NVVCVACAMSSVNELVNGQLKYTTRLVREARLGVSEDY-LRSTVDFVEVERPRR-L------EFGGKLTITQWTRFSIYE 402 (467)
Q Consensus 331 N~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~-~~~~~~~~~~~~~~~-~------~~~~~~~~tsw~~~~~~~ 402 (467)
|++..+.+.++++||.+.+|+++|.+||+++.+++.++ +++.++|++..++.. + ..+.++.+|||++++ +|
T Consensus 308 N~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~-~y 386 (451)
T 2rkv_A 308 LLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVG-LW 386 (451)
T ss_dssp CCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCCTTTCEEEEECTTCC-GG
T ss_pred cceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccCCCCCEEEeccccCC-cc
Confidence 99999999999999999999999999999999998888 999999998754322 1 124579999999999 99
Q ss_pred ceeec--CCcceeeccCcccCCCcEEEEccCCCCCCCCcEEEEEEcCHHHHHHHHHHhcc
Q 039112 403 SADFG--WGRPIYAGPIDLTPTPQVCVFLPEGEADPNGNMVVCICLPESATEKFIEFLCL 460 (467)
Q Consensus 403 ~~DFG--~G~P~~v~~~~~~~~~g~~~ilp~~~~~~~g~~ev~v~L~~~~m~~l~~~~~~ 460 (467)
++||| ||+|.+++.+...+.+|.++++|.. + +||++|.|+|++++|++|++|.+|
T Consensus 387 ~~DFG~gwG~P~~v~~~~~~~~~g~~~~~p~~-~--~ggi~v~v~L~~~~m~~f~~d~ef 443 (451)
T 2rkv_A 387 DYDFGLGLGKPETVRRPIFEPVESLMYFMPKK-P--DGEFCAALSLRDEDMDRLKADKEW 443 (451)
T ss_dssp GCCTTCSSCSCSEEECCBCSCCTTEEEECCCC-T--TSCEEEEEEEEHHHHHHHHHCHHH
T ss_pred ccccCCCCCCceEEEcCCccCCCCEEEEecCC-C--CCCEEEEEEeCHHHHHHHhcCHHH
Confidence 99998 7999999865443568999999753 3 349999999999999999998773
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.22 E-value=1.4e-09 Score=110.15 Aligned_cols=290 Identities=13% Similarity=0.090 Sum_probs=166.0
Q ss_pred CeeeCCcccccccccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCCCceeeecCCCcEEEEeeCCCCe
Q 039112 39 DTLYLSNLDDIIGARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPLSARLRENHNGKLEVFFGPDQGA 118 (467)
Q Consensus 39 ~~~~Ls~lD~~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~~gv 118 (467)
..+|||++.+.+....| ...+.|+.+. ..+.++|++++.+++.++|.|-.++....++.+++.. .....
T Consensus 6 ~~~pls~~Q~~~~~~~y-~~~~~~~l~g---------~ld~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~-~~~~~ 74 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEV-FTSMTIQLRG---------VIDVDALSDAFDALLETHPVLASHLEQSSDGGWNLVA-DDLLH 74 (422)
T ss_dssp EEEECCHHHHHHHHTTC-EEEEEEEEES---------CCCHHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEE-CCSSS
T ss_pred eeecCCHHHHHHHhcCc-eEEEEEEEec---------CCCHHHHHHHHHHHHHhCccceEEEEecCCcceeeec-cCCCC
Confidence 47899999885432122 3344444432 2468999999999999999999999876555565555 33222
Q ss_pred e-EEEEEccCchhhhCCCCCCCccccccccCCCCCCCCccCCcceeeeeeeeeecCeEEEEccccccccchhhHHHHHHH
Q 039112 119 L-MVEARSETVLAELGDLAVPNPAWAPLIYKFPNEEPYKILDMPLVIAQVTVFSCGGFSLGLRLCHCICDGFGAMQFLSA 197 (467)
Q Consensus 119 ~-f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~p~~~~~~~~~~P~l~vQvt~f~~GG~iLg~~~~H~v~Dg~g~~~fl~~ 197 (467)
. +.+.+. .+..+ . ..+.+. ..+. + ...|++.+.+.. .+++..|.+.+||.++||.|+..|++.
T Consensus 75 ~~~~~~d~----~~~~~---~-~~~~~~--~~~~----d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~ 138 (422)
T 1q9j_A 75 SGICVIDG----TAATN---G-SPSGNA--ELRL----D-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDE 138 (422)
T ss_dssp CCCEEEC--------------------C--CCCC----C-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHH
T ss_pred CceEEEEC----CCCCc---c-hhhhcc--cCcc----C-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHH
Confidence 2 222111 11000 0 001000 0011 2 467888888877 777899999999999999999999999
Q ss_pred HHHHhcc----CCCCCCC-CCCCcc--ccccCCC-----CCCCCCCCcccccc--c-CCCCcc--ccccCCCceEEEEEe
Q 039112 198 WAATAKA----GRLVVNP-QPCWER--EFFRPRH-----PPIIKHPHIEYMRI--D-EGSNLT--MTLWQAKPIQKCYRI 260 (467)
Q Consensus 198 wa~~~r~----G~~~~~~-~P~~dr--~~l~~~~-----~p~~~~~~~~~~~~--~-~~~~~~--~~~~~~~~~~~~f~f 260 (467)
|.+.++. |.+...+ .+..+- .....+. .+.......+|+.- + ...-|. ............+.+
T Consensus 139 l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l 218 (422)
T 1q9j_A 139 LFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWL 218 (422)
T ss_dssp HHHHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECC
T ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEe
Confidence 9998872 3332222 011110 1110000 01110112344421 1 100010 011122346688999
Q ss_pred CHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHhhcCCCCCCceeEEEEEeeccCCCCCCCCCCCccccceEEEeeec
Q 039112 261 SRKFQAHLKNLAQPDDNFPCTSFDAMAAHIWRSWVRAIDVQPPNYKLRLTFSVNARQKLKNPPLKDGFYGNVVCVACAMS 340 (467)
Q Consensus 261 ~~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~~~~~~~~~ 340 (467)
+.+..++|++.|...+ +|.++++.|.+-..+.|-+. .......+.++++.|... .|+++..=+.|.+.+....+
T Consensus 219 ~~~~~~~l~~~a~~~~---~t~~~~l~aa~~~~l~r~~~--~~~~~v~~g~~~~~R~~~-~~~~~~~~~~~~vG~f~n~l 292 (422)
T 1q9j_A 219 SKQQTSDLMAFGREHR---LSLNAVVAAAILLTEWQLRN--TPHVPIPYVYPVDLRFVL-APPVAPTEATNLLGAASYLA 292 (422)
T ss_dssp CHHHHHHHHHHHTTTT---CCHHHHHHHHHHHHHHHHHT--CSSCCEEEEEEEETTTTS-SSCCCTTTBSCCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHhccc--CCCceEEEeeeeeccccc-CCCCChhhhhhhheeeeeee
Confidence 9999999999998754 89999999887666665422 345778999999999886 54443112233333333333
Q ss_pred cHHHHhhccHHHHHHHHHHHHhc
Q 039112 341 SVNELVNGQLKYTTRLVREARLG 363 (467)
Q Consensus 341 ~~~~l~~~~L~~~A~~Ir~ai~~ 363 (467)
++.. +.++.+++..+++.+.+
T Consensus 293 p~~~--~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 293 EIGP--NTDIVDLASDIVATLRA 313 (422)
T ss_dssp CCCS--SCCHHHHHHHHHHHHHH
T ss_pred eccC--CCCHHHHHHHHHHHHHH
Confidence 2221 34667777777777654
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.58 E-value=7.4e-07 Score=92.24 Aligned_cols=288 Identities=14% Similarity=-0.017 Sum_probs=161.1
Q ss_pred CeeeCCcccccc-------cccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCCCceeeecCCCcEEEE
Q 039112 39 DTLYLSNLDDII-------GARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPLSARLRENHNGKLEVF 111 (467)
Q Consensus 39 ~~~~Ls~lD~~~-------~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~ 111 (467)
..+|||+.-+.+ +... ....+.|+.+. ..+.++|++++.+++.++|.|--++... +|.+. .
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g---------~ld~~~L~~A~~~lv~rh~~LRt~f~~~-~~~~~-~ 79 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSG---------RIDDDRLAAAADEVLDAFPLLRVNFVDD-DGLWM-R 79 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEES---------SCCHHHHHHHHHHHHHHCGGGGEEEEES-SSEEE-E
T ss_pred CCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeC---------CCCHHHHHHHHHHHHHhchhceeEEEcc-CCEEE-E
Confidence 389999876532 2112 23445555542 2569999999999999999998888764 35555 3
Q ss_pred eeCCCCeeEEEEEcc-Cch--hhhCCCCCCCccccccccCCCCCCCCccCCcceeeeeeeeeecCeEEEEccccccccch
Q 039112 112 FGPDQGALMVEARSE-TVL--AELGDLAVPNPAWAPLIYKFPNEEPYKILDMPLVIAQVTVFSCGGFSLGLRLCHCICDG 188 (467)
Q Consensus 112 ~~~~~gv~f~~a~~d-~~~--~~l~~~~~p~~~~~~l~p~~p~~~~~~~~~~P~l~vQvt~f~~GG~iLg~~~~H~v~Dg 188 (467)
..... +.+.+.+.. .+- +++.+ ...+... .+. +....|++.+.+....++...|.+.+||.++||
T Consensus 80 v~~~~-~~~~~~d~~~~~~~~~~~~~------~~~~~~~-~~f----dl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg 147 (493)
T 4hvm_A 80 TRENA-DALVRSDLRGHPDPQARCVE------LLRADRD-RPT----DPERDPLVRLHLVRLSETDVVLGVVAHQMLLDA 147 (493)
T ss_dssp ECSCC-CCEEEEECTTSSSHHHHHHH------HHHHHHS-SCC----CTTTSCSEEEEEEECSSSEEEEEEEEETTTCCH
T ss_pred ecCCC-CCceEEECCCCCchHHHHHH------HHHHHhc-CCC----CCCCCCeEEEEEEEECCCcEEEEEecchhhccH
Confidence 31333 555444321 000 11100 0001110 111 223468888888777677789999999999999
Q ss_pred hhHHHHHHHHHHHhccCCCCCCCCCCCccccccC-CC--CCCC-C-CCCccccc--ccCCCC-ccccccCCCceEEEEEe
Q 039112 189 FGAMQFLSAWAATAKAGRLVVNPQPCWEREFFRP-RH--PPII-K-HPHIEYMR--IDEGSN-LTMTLWQAKPIQKCYRI 260 (467)
Q Consensus 189 ~g~~~fl~~wa~~~r~G~~~~~~~P~~dr~~l~~-~~--~p~~-~-~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~f~f 260 (467)
.|+..|++.+.+.+. |.+.. . +..| ...- +. .... . ....+||. +...+. +..+.+........+.+
T Consensus 148 ~S~~~l~~~l~~~Y~-g~~~~-~-~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~~~~~~~~~~~~~~~~l 222 (493)
T 4hvm_A 148 RSRYMVLGAVWQAYY-GRFRP-A-QYRD--FAEVADFHPLDRETVRVARHRWWSRRLPALPVRGGDGGPVGPPETSRLRV 222 (493)
T ss_dssp HHHHHHHHHHHHHHT-TCCCG-G-GSBC--GGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC-------CCEEEEEEE
T ss_pred HHHHHHHHHHHHHhC-CCCCC-c-CHHH--HHHHHhhhhcccChhhHHHHHHHHHhccCCCCCCCCCCCCCCCeeEEEEc
Confidence 999999999999997 86432 2 2111 1110 00 0000 0 01122321 111000 10111112266788999
Q ss_pred CHHHHHHHHHHhCCCCCCCcc--hHHHHHHHHHHHHHhhcCC-------CCCCceeEEEEEeeccCCCCCCCCCCCcccc
Q 039112 261 SRKFQAHLKNLAQPDDNFPCT--SFDAMAAHIWRSWVRAIDV-------QPPNYKLRLTFSVNARQKLKNPPLKDGFYGN 331 (467)
Q Consensus 261 ~~~~l~~Lk~~~~~~~~~~~S--t~d~l~A~lW~~~~rAr~~-------~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN 331 (467)
+.+..++|++.|.+.+ +| .+.++.|.+-..+.+-+.. ........+.++++.|..- . -.+.+|+
T Consensus 223 ~~~~~~~l~~~a~~~~---vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~-~~~~vG~ 295 (493)
T 4hvm_A 223 PGSRWQALTEPGGPLG---GNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---Q-LGSVVGP 295 (493)
T ss_dssp EHHHHHHHHCC---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---T-CCSBCSC
T ss_pred CHHHHHHHHHHHHHcC---CCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---c-hhcCeEe
Confidence 9999999999887654 78 9999888765555443100 0134679999999999642 2 3567888
Q ss_pred ceEEEeeeccHHHHhhccHHHHHHHHHHHHh
Q 039112 332 VVCVACAMSSVNELVNGQLKYTTRLVREARL 362 (467)
Q Consensus 332 ~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~ 362 (467)
++......+......+.++.+++..+++.+.
T Consensus 296 f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~ 326 (493)
T 4hvm_A 296 LTDRVVFGVDLTGLREPSFRDLMSRTQAGFL 326 (493)
T ss_dssp CEEEEEEEEECTTCSSCBHHHHHHHHHHHHH
T ss_pred eeceeEEEEecCCCcCCCHHHHHHHHHHHHH
Confidence 7766655544332124567777777766654
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.57 E-value=3.8e-06 Score=87.44 Aligned_cols=254 Identities=13% Similarity=0.116 Sum_probs=148.6
Q ss_pred cHHHHHHHHHHhhccccCCCCceeeecCCCc-EEEEeeCCCCeeEEEEEccCchhhhCCCCCCCccccccccCCCCCCCC
Q 039112 77 PVFEILRQALADILVPYYPLSARLRENHNGK-LEVFFGPDQGALMVEARSETVLAELGDLAVPNPAWAPLIYKFPNEEPY 155 (467)
Q Consensus 77 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~-~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~p~~~~~ 155 (467)
.+.++|++++..++.++|.|--++.... |. .++.. ....+.+...+. +-+++.. ..+... .+.
T Consensus 131 ld~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~-~~~~~~~~~~~~--~~~~~~~-------~~~~~~-~~f---- 194 (520)
T 2jgp_A 131 LERTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIH-EDVPFALAYSEV--TEEEARE-------LVSSLV-QPF---- 194 (520)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEEC-SCCCCCCEEEEC--CHHHHHH-------HHHHTC-CCC----
T ss_pred CCHHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEEC-CCCCCceEEEeC--CHHHHHH-------HHHHhc-CCC----
Confidence 4699999999999999999988887643 44 33333 322232222221 1111110 000000 011
Q ss_pred ccCCcceeeeeeeeeecCeEEEEccccccccchhhHHHHHHHHHHHhccCCCCCCCCCCCcccccc---C-CCCCCCCCC
Q 039112 156 KILDMPLVIAQVTVFSCGGFSLGLRLCHCICDGFGAMQFLSAWAATAKAGRLVVNPQPCWEREFFR---P-RHPPIIKHP 231 (467)
Q Consensus 156 ~~~~~P~l~vQvt~f~~GG~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~G~~~~~~~P~~dr~~l~---~-~~~p~~~~~ 231 (467)
+....|++.+.+....++...|-+.+||.++||.|+..|++.+.+.++ |.+.... |...++... . ...+.. ..
T Consensus 195 dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~-~~~l~~~-~~~~~d~~~~~~~~~~~~~~-~~ 271 (520)
T 2jgp_A 195 DLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQ-GDVLPEL-RIQYKDFAVWQQEFSQSAAF-HK 271 (520)
T ss_dssp CTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHT-TCCCCCC-SCCHHHHHHHHHHHTTSHHH-HH
T ss_pred CCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHc-cCCCCCC-CCCHHHHHHHHHHhhcChhh-HH
Confidence 223468888887766677899999999999999999999999999999 7533221 211111110 0 000000 00
Q ss_pred Cccccc--ccCCC---C-ccc--c--ccCCCceEEEEEeCHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHhhcCCC
Q 039112 232 HIEYMR--IDEGS---N-LTM--T--LWQAKPIQKCYRISRKFQAHLKNLAQPDDNFPCTSFDAMAAHIWRSWVRAIDVQ 301 (467)
Q Consensus 232 ~~~~~~--~~~~~---~-~~~--~--~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~ 301 (467)
..+||. +.... . |.. . ..........+.++.+..++|++.+...+ +|.+.++.|.+-..+.+-
T Consensus 272 ~~~yW~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~---~T~~~~l~aa~a~~L~~~---- 344 (520)
T 2jgp_A 272 QEAYWLQTFADDIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQATG---TTLYMVLLAAYNVLLAKY---- 344 (520)
T ss_dssp HHHHHHHHTSSCCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHHHT---CCHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHhCCCCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHh----
Confidence 112221 00000 0 000 0 11123456788999999999999887543 889999888755555443
Q ss_pred CCCceeEEEEEeeccCCCCCCCCCCCccccceEEEeeeccHHHHhhccHHHHHHHHHHHHh
Q 039112 302 PPNYKLRLTFSVNARQKLKNPPLKDGFYGNVVCVACAMSSVNELVNGQLKYTTRLVREARL 362 (467)
Q Consensus 302 ~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~ 362 (467)
...+...+.++++.|..- . -++-+|+.+........... +.++.+++..+++.+.
T Consensus 345 ~~~~dv~~g~~~~gR~~~---~-~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~ 399 (520)
T 2jgp_A 345 AGQEDIIVGTPITGRSHA---D-LEPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNAL 399 (520)
T ss_dssp HTCSCEEEEEEECCCCSG---G-GTTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHH
T ss_pred cCCCCeEEEeccCCCCch---h-hhccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHH
Confidence 245678999999999642 2 24667777766555443322 4567777777777654
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.43 E-value=1.6e-05 Score=80.63 Aligned_cols=255 Identities=14% Similarity=0.067 Sum_probs=147.0
Q ss_pred cHHHHHHHHHHhhccccCCCCceeeecCCCcEEEEeeCCCCeeEEEEEccCchhhhCCCCCCCccccccc---cCCCCCC
Q 039112 77 PVFEILRQALADILVPYYPLSARLRENHNGKLEVFFGPDQGALMVEARSETVLAELGDLAVPNPAWAPLI---YKFPNEE 153 (467)
Q Consensus 77 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~---p~~p~~~ 153 (467)
.+.++|++++..++.++|.|--++... +| .+. ....+.+.+.+.. ....+...+.+++ ...+.
T Consensus 33 ld~~~L~~A~~~lv~rh~~LRt~f~~~-~~--~v~--~~~~~~~~~~d~~-------~~~~~~~~~~~~~~~~~~~~f-- 98 (436)
T 1l5a_A 33 LDTTLLLRALHLTVSEIDLFRARFSAQ-GE--LYW--HPFSPPIDYQDLS-------IHLEAEPLAWRQIEQDLQRSS-- 98 (436)
T ss_dssp CCHHHHHHHHHHHHHTCGGGGEEECTT-CC--EEE--CSSCCCCEEEECT-------TCTTHHHHHHHHHHHHHTSCC--
T ss_pred CCHHHHHHHHHHHHHHhheeEEEEEec-CC--eEC--CCcCCCccEEeCC-------CCCCHHHHHHHHHHHHhcCCC--
Confidence 469999999999999999998887653 34 332 2222333222211 0000000011100 00111
Q ss_pred CCccCCcceeeeeeeeeecCeEEEEccccccccchhhHHHHHHHHHHHhcc---CCCCCCCCCCCcccccc---C-CCCC
Q 039112 154 PYKILDMPLVIAQVTVFSCGGFSLGLRLCHCICDGFGAMQFLSAWAATAKA---GRLVVNPQPCWEREFFR---P-RHPP 226 (467)
Q Consensus 154 ~~~~~~~P~l~vQvt~f~~GG~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~---G~~~~~~~P~~dr~~l~---~-~~~p 226 (467)
+....|++.+.+....++...|.+.+||.++||.|+..|++.+.+.++. |.+...+ +..-++... . ....
T Consensus 99 --dl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~ 175 (436)
T 1l5a_A 99 --TLIDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAA-FKPYQSYLEEEAAYLTSH 175 (436)
T ss_dssp --CCBTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCC-CCCHHHHHHHHHHHHTSH
T ss_pred --CcCCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCC-ccCHHHHHHHHHHhhccH
Confidence 2335688888877666788999999999999999999999999998872 4432211 110011110 0 0000
Q ss_pred CCCCCCccccc--ccCCC---C-cc-ccccCCCceEEEEEeCHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHhhcC
Q 039112 227 IIKHPHIEYMR--IDEGS---N-LT-MTLWQAKPIQKCYRISRKFQAHLKNLAQPDDNFPCTSFDAMAAHIWRSWVRAID 299 (467)
Q Consensus 227 ~~~~~~~~~~~--~~~~~---~-~~-~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~ 299 (467)
.. ....+||. +...+ . |. ............+.++.+..++|++.+...+ +|.+.++.|.+-..+.+-
T Consensus 176 ~~-~~~~~~W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~---~t~~~~l~aa~~~~L~~~-- 249 (436)
T 1l5a_A 176 RY-WQDKQFWQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANANQ---IGWPDALVALCALYLESA-- 249 (436)
T ss_dssp HH-HHHHHHHHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHH--
T ss_pred hH-HHHHHHHHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHHh--
Confidence 00 01112221 00000 0 00 0111233457789999999999999987654 889999888755544443
Q ss_pred CCCCCceeEEEEEeeccCCCCCCCCCCCccccceEEEeeeccHHHHhhccHHHHHHHHHHHHhc
Q 039112 300 VQPPNYKLRLTFSVNARQKLKNPPLKDGFYGNVVCVACAMSSVNELVNGQLKYTTRLVREARLG 363 (467)
Q Consensus 300 ~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 363 (467)
.+ ....+.++++.|..- . -.+-+|+.+........... +.++.+++..+++.+..
T Consensus 250 --~g-~dv~ig~~~~~R~~~---~-~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 250 --EP-DAPWLWLPFMNRWGS---V-AANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp --ST-TCCEEEEEECCCTTS---G-GGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred --hC-CceEEeeecccCCCh---H-HhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 35 788999999999642 2 25667777766555443332 45677777777776653
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.35 E-value=2e-05 Score=80.51 Aligned_cols=295 Identities=11% Similarity=0.030 Sum_probs=164.0
Q ss_pred CeeeCCcccccc-----cccceeeEEEEecCCCCCCCCCCCCccHHHHHHHHHHhhccccCCCCceeeecCCCcEEEEee
Q 039112 39 DTLYLSNLDDII-----GARVFTPTIYFYRSSEDDSKSNNNNRPVFEILRQALADILVPYYPLSARLRENHNGKLEVFFG 113 (467)
Q Consensus 39 ~~~~Ls~lD~~~-----~~~~y~~~~~~f~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~ 113 (467)
..+|||+..+.+ +........+.|+.+. ..+.+.|+++|..++.+++.|--++....++-.++...
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g---------~ld~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~ 86 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPE---------GFDPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRG 86 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETT---------CCCHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECC
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCC---------CCCHHHHHHHHHHHHHhChHhheEEecCCCceeeeccc
Confidence 478999876522 1101223445555542 25699999999999999999988887653333444431
Q ss_pred C-CCCeeEEEEEcc--CchhhhCCCCCCCccccccccCCCCCCCCccCCcceeeeeeeeeecCeEEEEccccccccchhh
Q 039112 114 P-DQGALMVEARSE--TVLAELGDLAVPNPAWAPLIYKFPNEEPYKILDMPLVIAQVTVFSCGGFSLGLRLCHCICDGFG 190 (467)
Q Consensus 114 ~-~~gv~f~~a~~d--~~~~~l~~~~~p~~~~~~l~p~~p~~~~~~~~~~P~l~vQvt~f~~GG~iLg~~~~H~v~Dg~g 190 (467)
. ...+.+.+.+.. ...++.. ..+....- .+. +....|++.+.+....++.. |-+.+||.++||.|
T Consensus 87 ~~~~~~~~~~~d~~~~~~~~~~~------~~~~~~~~-~~f----dl~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S 154 (466)
T 2xhg_A 87 LGGQLYDFFSYNLTAQPDVQQAI------EAETQRLH-SSM----NLQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGIS 154 (466)
T ss_dssp SSSCCCEEEEEECTTCSCHHHHH------HHHHHHHH-TTC----CTTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHH
T ss_pred cccccceeEEEecCCcccHHHHH------HHHHHHHH-hcc----CCCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhh
Confidence 1 123333333221 0111100 00000000 011 23456888888776655544 67999999999999
Q ss_pred HHHHHHHHHHHhcc---CCCCCCCC-CCCcccccc---C-CCCCCCCCCCccccc-----cc--CCCCccc--cccCCCc
Q 039112 191 AMQFLSAWAATAKA---GRLVVNPQ-PCWEREFFR---P-RHPPIIKHPHIEYMR-----ID--EGSNLTM--TLWQAKP 253 (467)
Q Consensus 191 ~~~fl~~wa~~~r~---G~~~~~~~-P~~dr~~l~---~-~~~p~~~~~~~~~~~-----~~--~~~~~~~--~~~~~~~ 253 (467)
+..|++.+.+.++. |.+...+. +..-++... . ...+.. ....+||. .+ .++.... .......
T Consensus 155 ~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~-~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~ 233 (466)
T 2xhg_A 155 WRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADL-LSEIPYWESLESQAKNVSLPKDYEVTDCKQKSV 233 (466)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHH-HTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccc-hhhhHHHHHhhccCCcccCCccccccccccccc
Confidence 99999999988762 44332220 111111110 0 000000 01122321 01 0100000 0111234
Q ss_pred eEEEEEeCHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHhhcCCCCCCceeEEEEEeeccCCCCCC-CCCCCccccc
Q 039112 254 IQKCYRISRKFQAHLKNLAQPDDNFPCTSFDAMAAHIWRSWVRAIDVQPPNYKLRLTFSVNARQKLKNP-PLKDGFYGNV 332 (467)
Q Consensus 254 ~~~~f~f~~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~l~~~vd~R~rl~~p-~lp~~Y~GN~ 332 (467)
....+.++++..++|++.+... ..+|.++++.|.+-..+.+-. ......+.++++.|... .+ +--.+-+|+.
T Consensus 234 ~~~~~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~----~~~dv~ig~~~~gR~~~-~~~~~~~~~vG~f 306 (466)
T 2xhg_A 234 RNMRIRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWS----KLAQIVIHLEGHGREDI-IEQANVARTVGWF 306 (466)
T ss_dssp EEEEEECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHH----CCSEEEEEEEECCCCSC-STTCCCTTCCSCC
T ss_pred eEEEEEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHh----CCCceEEEecCCCCCcc-ccCCCccccccce
Confidence 5678899999999999877432 147899998887665555542 45678999999999764 21 1124667777
Q ss_pred eEEEeeeccHHHHhhccHHHHHHHHHHHHhcC
Q 039112 333 VCVACAMSSVNELVNGQLKYTTRLVREARLGV 364 (467)
Q Consensus 333 ~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~ 364 (467)
+......+.... +.++.+++..|++.+..+
T Consensus 307 ~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 307 TSQYPVLLDLKQ--TAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp CEEEEEEEECSC--CCSHHHHHHHHHHHHHHS
T ss_pred eeeccEEEecCC--CCCHHHHHHHHHHHHHhC
Confidence 766554443322 457888888898888765
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.25 E-value=1.2e-05 Score=93.20 Aligned_cols=263 Identities=13% Similarity=0.035 Sum_probs=153.6
Q ss_pred cHHHHHHHHHHhhccccCCCCceeeecCCC-cEEEEeeCCCCeeEEEEEcc-CchhhhCCCCCCCcccccccc---CCCC
Q 039112 77 PVFEILRQALADILVPYYPLSARLRENHNG-KLEVFFGPDQGALMVEARSE-TVLAELGDLAVPNPAWAPLIY---KFPN 151 (467)
Q Consensus 77 ~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G-~~~i~~~~~~gv~f~~a~~d-~~~~~l~~~~~p~~~~~~l~p---~~p~ 151 (467)
.+.++|++++.+++.+++.|--++....+| -.++.. ....+.+.+.+.. .+-.+- ...+..++- ..+.
T Consensus 47 ld~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~-~~~~~~~~~~d~~~~~~~~~------~~~~~~~~~~~~~~~f 119 (1304)
T 2vsq_A 47 LNIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVL-KKRQFHIEEIDLTHLTGSEQ------TAKINEYKEQDKIRGF 119 (1304)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEE-SCCCCCEEEEECTTSCHHHH------HHHHHHHHHHHHHHCC
T ss_pred cCHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEEC-CCCCCceEEEECCCCCchhH------HHHHHHHHHHHhcCCC
Confidence 569999999999999999998888765444 456655 4434444333221 110000 000100000 0011
Q ss_pred CCCCccCCcceeeeeeeeeecCeEEEEccccccccchhhHHHHHHHHHHHhcc---CCCCCCCCCC-CccccccCCCCCC
Q 039112 152 EEPYKILDMPLVIAQVTVFSCGGFSLGLRLCHCICDGFGAMQFLSAWAATAKA---GRLVVNPQPC-WEREFFRPRHPPI 227 (467)
Q Consensus 152 ~~~~~~~~~P~l~vQvt~f~~GG~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~---G~~~~~~~P~-~dr~~l~~~~~p~ 227 (467)
+....|++++.+....++...|-+.+||.++||.|+..|++.+++.++. |.+...+ |. .-++...-.....
T Consensus 120 ----dl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~-~~~~y~d~~~~~~~~~ 194 (1304)
T 2vsq_A 120 ----DLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLP-PVKPYKDYIKWLEKQD 194 (1304)
T ss_dssp ----CTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCC-CCCCTHHHHHHHHTSC
T ss_pred ----CCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCC-CcccHHHHHHHHhcch
Confidence 2345688888887777788999999999999999999999999998762 4332222 21 1111110000000
Q ss_pred CCCCCccccc--ccC------CCCccc-cccCCCceEEEEEeCHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHhhc
Q 039112 228 IKHPHIEYMR--IDE------GSNLTM-TLWQAKPIQKCYRISRKFQAHLKNLAQPDDNFPCTSFDAMAAHIWRSWVRAI 298 (467)
Q Consensus 228 ~~~~~~~~~~--~~~------~~~~~~-~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr 298 (467)
. ....+||. +.. .+.... ...........+.++++..++||+.|++.+ +|.+.+|.|.+-..+.|-
T Consensus 195 ~-~~~~~yW~~~L~~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~---~T~~~vllaa~a~~L~r~- 269 (1304)
T 2vsq_A 195 K-QASLRYWREYLEGFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQH---TTLSTALQAVWSVLISRY- 269 (1304)
T ss_dssp H-HHHHHHHHHHHTTCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHH-
T ss_pred h-hHHHHHHHHHhCCCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHh-
Confidence 0 01122321 111 000000 011123456678899999999999997654 889998888655444443
Q ss_pred CCCCCCceeEEEEEeeccCCCCCCCCCCCccccceEEEeeeccHHHHhhccHHHHHHHHHHHHhc
Q 039112 299 DVQPPNYKLRLTFSVNARQKLKNPPLKDGFYGNVVCVACAMSSVNELVNGQLKYTTRLVREARLG 363 (467)
Q Consensus 299 ~~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 363 (467)
...+...+..+++.|... .+.+ ++-+|+.+........... +.++.++...+++....
T Consensus 270 ---tg~~dvv~G~pvsgR~~~-~~~~-~~~vG~fvntlplr~~~~~--~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 270 ---QQSGDLAFGTVVSGRPAE-IKGV-EHMVGLFINVVPRRVKLSE--GITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp ---HTCSEEEEEEEECCCCTT-STTG-GGCCSSCCEEEEEEEECCT--TCBHHHHHHHHHHHHHH
T ss_pred ---cCCCCEEEEEEeCCCCcc-chhh-hcccccceeEEEEEecCCC--CCcHHHHHHHHHHHHHH
Confidence 245678999999999763 2232 4567776665554443322 45777788888776643
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.00 E-value=0.00073 Score=70.07 Aligned_cols=268 Identities=13% Similarity=0.078 Sum_probs=145.1
Q ss_pred ccHHHHHHHHHHhhccccCCCCceeeecCCCcEEEEee-C-CC-C------eeEEEEEccCchhhh----------CCCC
Q 039112 76 RPVFEILRQALADILVPYYPLSARLRENHNGKLEVFFG-P-DQ-G------ALMVEARSETVLAEL----------GDLA 136 (467)
Q Consensus 76 ~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~G~~~i~~~-~-~~-g------v~f~~a~~d~~~~~l----------~~~~ 136 (467)
....++||+|.-.+=-++|-+|+++..+.++.....|. . ++ - --|++.+.+.+-+|+ ....
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~~ 151 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAANDN 151 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-C
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhcccccC
Confidence 45677888888877788999999998774444444442 1 11 1 135554444455554 2111
Q ss_pred CCCccccccccCCCCCCCCccCCcceeeeeeeeeecC--eEEEEccccccccchhhHHHHHHHHHHHhcc--CCCC-CCC
Q 039112 137 VPNPAWAPLIYKFPNEEPYKILDMPLVIAQVTVFSCG--GFSLGLRLCHCICDGFGAMQFLSAWAATAKA--GRLV-VNP 211 (467)
Q Consensus 137 ~p~~~~~~l~p~~p~~~~~~~~~~P~l~vQvt~f~~G--G~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r~--G~~~-~~~ 211 (467)
.|.. ...+..=.+.. ..+.| + .+ -.-|.+.+||.++||.|...|++.+-+.... +... ...
T Consensus 152 ~p~~-~~~l~~v~~~~----~~~~~--------~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~ 217 (519)
T 3fot_A 152 TPSK-SIELFLLSDVS----TDSTP--------I-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREM 217 (519)
T ss_dssp CCCC-SCEEEEEESSS----STTSC--------C-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGS
T ss_pred CCcc-ceEEEEEeccc----ccccc--------C-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCC
Confidence 2221 11110000000 01111 1 11 3667788999999999999999999887762 1100 111
Q ss_pred CCCCc----cccccCCCCCCCC-CCC------cc-------cc-----cccCCCCccccccCCCceEEEEEeCHHHHHHH
Q 039112 212 QPCWE----REFFRPRHPPIIK-HPH------IE-------YM-----RIDEGSNLTMTLWQAKPIQKCYRISRKFQAHL 268 (467)
Q Consensus 212 ~P~~d----r~~l~~~~~p~~~-~~~------~~-------~~-----~~~~~~~~~~~~~~~~~~~~~f~f~~~~l~~L 268 (467)
|.++ -.-|. ||... ... ++ |. ..+...-|.. ..........+.|+++..++|
T Consensus 218 -~~~~~g~E~~~L~---P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~-~~~~~~~~~~~~ls~~~t~~L 292 (519)
T 3fot_A 218 -KKIQWGQEIKNLS---PPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQ-PGLALPRCVIHKLSADESIDI 292 (519)
T ss_dssp -CCCCTTTTGGGSC---CCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCC-CCCCCEEEEEEECCHHHHHHH
T ss_pred -CcCCCCcccccCC---cCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCC-CCCCCcceEEEEcCHHHHHHH
Confidence 2222 01111 11100 000 00 00 0001110111 111233456799999999999
Q ss_pred HHHhCCCCCCCcchHHHHHHHHHHHHHhhcC--CCCCCceeEEEEEeeccCCCCCCCCCCCccccceEEEeeecc-----
Q 039112 269 KNLAQPDDNFPCTSFDAMAAHIWRSWVRAID--VQPPNYKLRLTFSVNARQKLKNPPLKDGFYGNVVCVACAMSS----- 341 (467)
Q Consensus 269 k~~~~~~~~~~~St~d~l~A~lW~~~~rAr~--~~~~~~~~~l~~~vd~R~rl~~p~lp~~Y~GN~~~~~~~~~~----- 341 (467)
++.|++..++.+|-+.+|.|.+-.++.+... ...........++||+|+++ .++.-.+|+|.+........+
T Consensus 293 ~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l-~~~~~~n~~~~~~~~~~~~v~~i~~~ 371 (519)
T 3fot_A 293 VKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWL-REDIASNFYAMCQTAAVVRIENLKSI 371 (519)
T ss_dssp HHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGB-CHHHHTSCCSCCEEEEEEEECCGGGG
T ss_pred HHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccC-CCcccccccceeeeeeeeEecCcccc
Confidence 9999987555699999997777666655321 10233468899999999999 554445788887776544331
Q ss_pred -----HHHHhhc-cHHHHHHHHHHHHhc
Q 039112 342 -----VNELVNG-QLKYTTRLVREARLG 363 (467)
Q Consensus 342 -----~~~l~~~-~L~~~A~~Ir~ai~~ 363 (467)
.+|+..+ .+.++|+.+++....
T Consensus 372 ~~~~~~~e~~~~~~~~~~ar~l~~~y~~ 399 (519)
T 3fot_A 372 TVSHKDEKELQVRALESACRNIKKSYRQ 399 (519)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhHhHHHHHHHHHHHHhhc
Confidence 1122211 156777777776554
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=67.87 E-value=3.4 Score=37.12 Aligned_cols=45 Identities=18% Similarity=0.409 Sum_probs=33.4
Q ss_pred CcceeeeeeeeeecCe--EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 159 DMPLVIAQVTVFSCGG--FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 159 ~~P~l~vQvt~f~~GG--~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
..|++.+--..-.+|. +-|++++||.++||.-...|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3577764322112343 67889999999999999999999998765
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=66.57 E-value=3.7 Score=36.97 Aligned_cols=44 Identities=18% Similarity=0.295 Sum_probs=31.7
Q ss_pred CcceeeeeeeeeecCe--EEEEccccccccchhhHHHHHHHHHHHh
Q 039112 159 DMPLVIAQVTVFSCGG--FSLGLRLCHCICDGFGAMQFLSAWAATA 202 (467)
Q Consensus 159 ~~P~l~vQvt~f~~GG--~iLg~~~~H~v~Dg~g~~~fl~~wa~~~ 202 (467)
..|++.+=-..-.+|. +-|++++||.++||.-...|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3577754221112333 6788999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=65.90 E-value=3.9 Score=36.89 Aligned_cols=44 Identities=18% Similarity=0.370 Sum_probs=33.2
Q ss_pred cceeeeeeeeeecCe--EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 160 MPLVIAQVTVFSCGG--FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 160 ~P~l~vQvt~f~~GG--~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
.|++.+--..-.+|. +-|++++||.++||.-...|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577765332222333 67889999999999999999999998765
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=64.95 E-value=4.7 Score=36.84 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=27.3
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998775
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=62.96 E-value=4 Score=36.92 Aligned_cols=29 Identities=24% Similarity=0.290 Sum_probs=26.9
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|++++||.+.||.-...|++.+.+...
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le 215 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIE 215 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHh
Confidence 45889999999999999999999999887
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=61.65 E-value=5.1 Score=36.45 Aligned_cols=29 Identities=24% Similarity=0.305 Sum_probs=26.9
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le 224 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLE 224 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 56899999999999999999999999876
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=61.32 E-value=5.2 Score=36.66 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=27.0
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999998876
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=59.77 E-value=5.7 Score=36.85 Aligned_cols=29 Identities=21% Similarity=0.367 Sum_probs=26.9
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998876
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=53.87 E-value=8.2 Score=35.61 Aligned_cols=29 Identities=38% Similarity=0.433 Sum_probs=27.1
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 238 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVE 238 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999987
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=52.36 E-value=9 Score=35.20 Aligned_cols=29 Identities=21% Similarity=0.297 Sum_probs=27.0
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le 233 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIE 233 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHh
Confidence 45899999999999999999999999887
No 23
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=39.96 E-value=17 Score=19.74 Aligned_cols=19 Identities=32% Similarity=0.494 Sum_probs=15.8
Q ss_pred CCcchHHHHHHHHHHHHHh
Q 039112 278 FPCTSFDAMAAHIWRSWVR 296 (467)
Q Consensus 278 ~~~St~d~l~A~lW~~~~r 296 (467)
+-+++.|-|+-++|+++..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 4578899999999998754
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=34.94 E-value=8.1 Score=38.57 Aligned_cols=29 Identities=24% Similarity=0.262 Sum_probs=0.0
Q ss_pred EEEEccccccccchhhHHHHHHHHHHHhc
Q 039112 175 FSLGLRLCHCICDGFGAMQFLSAWAATAK 203 (467)
Q Consensus 175 ~iLg~~~~H~v~Dg~g~~~fl~~wa~~~r 203 (467)
+-|++++||.++||.-...|++.+.+.+.
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 35899999999999999999999998776
No 25
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=28.75 E-value=51 Score=26.06 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhhccccCCCCceeeecCC-CcEEEEe
Q 039112 78 VFEILRQALADILVPYYPLSARLRENHN-GKLEVFF 112 (467)
Q Consensus 78 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~-G~~~i~~ 112 (467)
+.+.|.++|...+.+-..+||.+...-+ ++++|..
T Consensus 93 dlea~ekalkemirqarkfagtvtytl~gn~l~i~i 128 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 128 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 4889999999999999999999987755 4688876
No 26
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=28.49 E-value=40 Score=23.54 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhhccccCCCCceeeecCCC-cEEEEe
Q 039112 78 VFEILRQALADILVPYYPLSARLRENHNG-KLEVFF 112 (467)
Q Consensus 78 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~G-~~~i~~ 112 (467)
+.+.+.++|...+.+-..+||.+...-|| .++|..
T Consensus 11 dleafekalkemirqarkfagtvtytldgndleiri 46 (85)
T 2kl8_A 11 DLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRI 46 (85)
T ss_dssp SHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEE
Confidence 58889999999999999999999877654 588876
No 27
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=23.72 E-value=53 Score=25.95 Aligned_cols=35 Identities=14% Similarity=0.251 Sum_probs=29.7
Q ss_pred HHHHHHHHHHhhccccCCCCceeeecCC-CcEEEEe
Q 039112 78 VFEILRQALADILVPYYPLSARLRENHN-GKLEVFF 112 (467)
Q Consensus 78 ~~~~L~~sL~~~L~~~p~LaGrl~~~~~-G~~~i~~ 112 (467)
+.+.|.++|...+.+-..+||.+...-+ ++++|..
T Consensus 12 dlea~ekalkemirqarkfagtvtytl~gn~l~i~i 47 (170)
T 4hhu_A 12 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVI 47 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEE
Confidence 4889999999999999999999987654 4677776
No 28
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=20.61 E-value=66 Score=21.12 Aligned_cols=23 Identities=13% Similarity=0.161 Sum_probs=19.3
Q ss_pred eEEEEEeCHHHHHHHHHHhCCCC
Q 039112 254 IQKCYRISRKFQAHLKNLAQPDD 276 (467)
Q Consensus 254 ~~~~f~f~~~~l~~Lk~~~~~~~ 276 (467)
....|+|++++-+.|++.|.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE~ 24 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEEE 24 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEEEecHHHHHHHHHHHHHHH
Confidence 35689999999999999997654
No 29
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=20.43 E-value=2e+02 Score=19.08 Aligned_cols=44 Identities=14% Similarity=0.174 Sum_probs=36.0
Q ss_pred CCceEEEEEeCHHHHHHHHHHhCCCCCCCcchHHHHHHHHHHHHHhh
Q 039112 251 AKPIQKCYRISRKFQAHLKNLAQPDDNFPCTSFDAMAAHIWRSWVRA 297 (467)
Q Consensus 251 ~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rA 297 (467)
.+.....++++.+--++|+..|..++ .|.|.-+...|-+++.+.
T Consensus 5 ~~~~~~~lRlp~eL~~~l~~~A~~~g---rS~N~~i~~~L~~~l~~~ 48 (53)
T 1baz_A 5 SKMPQVNLRWPREVLDLVRKVAEENG---RSVNSEIYQRVMESFKKE 48 (53)
T ss_dssp CCSCEEEEECCHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHT
T ss_pred ccCCeeEEECCHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHhhc
Confidence 34567789999999999999998765 789998888888776554
Done!