Your job contains 1 sequence.
>039114
MNGFEFGRGSIRACSNHESDHSAMNEFMDHPTDHHLSINSAPSLASSSDGASRYNFENVN
FSYAVFKYINDILMEEDVASNTCMLQDCLALQATEKSFYDVLGQQYPPSPNQYSHCFNPN
GNSPDDDIDSSSSIDNNNSCDATNNASDEEVRHYSLKGSRGRKIHQIDDRDFLDEGRSNK
QLVPLLEEAVRCDMFVEVMIPKGGSYDSVQCPLFEAARNRAARNLPCDKTKIKGSNSRIL
RMMRQDNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFAN
GLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKAT
KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKA
AERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLR
LIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREV
FGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDF
DVDENGQWMLQGWKGKILYALSFWKPVQDSQN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039114
(632 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 1238 1.5e-140 2
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 1163 2.9e-131 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 1119 3.8e-127 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 1151 7.9e-117 1
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 994 7.2e-107 2
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 511 5.2e-49 1
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 506 1.8e-48 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 465 2.6e-47 2
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 462 8.1e-44 1
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 443 8.4e-42 1
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 432 1.2e-40 1
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 429 2.6e-40 1
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 428 7.8e-39 1
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 415 7.8e-39 1
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 407 6.6e-38 1
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 399 2.7e-35 1
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 256 3.4e-35 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 362 5.0e-31 1
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 309 7.1e-30 2
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 351 3.0e-29 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 327 7.3e-29 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 318 7.1e-28 1
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 319 2.8e-26 1
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 296 2.3e-23 1
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 296 4.3e-23 1
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 169 5.5e-19 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 223 3.1e-15 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 177 4.3e-10 1
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 147 4.6e-09 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 164 9.0e-09 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 163 1.8e-08 1
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 157 7.9e-08 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 136 9.6e-06 1
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 97 0.00054 1
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 1238 (440.9 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 240/470 (51%), Positives = 335/470 (71%)
Query: 161 GRKIHQID-DRDFLDEGRSNKQLVPLLEEAVRCDMFVEVMIPKGGSYDSVQCPLF--EAA 217
G+K H D D DF++E RSNKQ +EE+ +MF ++++ G + F E+A
Sbjct: 302 GKKSHWRDEDEDFVEE-RSNKQSAVYVEESELSEMFDKILVCGPGKPVCILNQNFPTESA 360
Query: 218 RNRAARNLPCDKTKIKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAAASNDQRVAIELS 277
+ A++ + KI+G S D+ E DL +LL CAQA + +D+R A E+
Sbjct: 361 KVVTAQS---NGAKIRGKKSTSTSHSN-DSKKETADLRTLLVLCAQAVSVDDRRTANEML 416
Query: 278 KQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISA 337
+QIR+HSSP G+G++RLAHYFAN LEARL+GT T ++ KTS AD+LKAY Y+S
Sbjct: 417 RQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAADMLKAYQTYMSV 476
Query: 338 SPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSF-RPGGPPKIRITG 396
PF+KA+ N + + T A +HIIDFGISYGFQWP I R S RPGG PK+RITG
Sbjct: 477 CPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITG 536
Query: 397 IELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVT 456
IELP+ GFRPAE V+ETGHRL + +R NVPFEY+AIAQKWETI+++DLK+ + E VV
Sbjct: 537 IELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVN 596
Query: 457 CMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFS 516
++R L D+T + +S RDAVL+LI++INP++F+ + +G YN+PFFV+RF+EA+FH+S
Sbjct: 597 SLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSGNYNAPFFVTRFREALFHYS 656
Query: 517 ALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFR 576
A+FDM ++ + ED+ RL+YE+E +GR +NV+ACEG ER++ PETY+QWQ+R +RAGFR
Sbjct: 657 AVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFR 716
Query: 577 QLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWKP 626
QLP+++EL++ +K ++ Y K+FDVD+NG W+LQGWKG+I+YA S W P
Sbjct: 717 QLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLWVP 766
Score = 158 (60.7 bits), Expect = 1.5e-140, Sum P(2) = 1.5e-140
Identities = 40/129 (31%), Positives = 58/129 (44%)
Query: 57 ENVNFSYAVFKYINDILMEEDVASNTCMLQDCLALQATEKSFYDVLGQQYPPSPNQYSHC 116
++ +FS +V KYI+ +LMEED+ CM D LALQA EKS Y+ LG++YP S + S
Sbjct: 78 DDADFSDSVLKYISQVLMEEDMEEKPCMFHDALALQAAEKSLYEALGEKYPSSSSASSVD 137
Query: 117 FXXXXXXXXXXXXXXXXXXXXXXXXATNNASDEEVRHYSLKGSRGRK--IHQIDDRDFLD 174
T +SD H+S+ G R +H +F+
Sbjct: 138 HPERLASDSPDGSCSGGAFSDYASTTTTTSSDS---HWSVDGLENRPSWLHTPMPSNFVF 194
Query: 175 EGRSNKQLV 183
+ S V
Sbjct: 195 QSTSRSNSV 203
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 1163 (414.5 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
Identities = 236/476 (49%), Positives = 319/476 (67%)
Query: 159 SRGRKIHQIDDRDFLDEGRSNKQLVPLLEEAVRCDMFVEVMI--PKGGS---YDSVQCPL 213
S+ RK + D ++E RS+K E+ +R D+ ++++ P G S +++++ L
Sbjct: 243 SKARK-NSSRDEICVEEERSSKLPAVFGEDILRSDVVDKILVHVPGGESMKEFNALRDVL 301
Query: 214 FEAARNRAARNLPCDKTKIKGSNSRILRMMR--QDNTSEVVDLSSLLTQCAQAAASNDQR 271
+ + A + K + +G R Q+ EVVDL SLL CAQA A++D+R
Sbjct: 302 KKGVEKKKASDAQGGKRRARGRGRGRGRGGGGGQNGKKEVVDLRSLLIHCAQAVAADDRR 361
Query: 272 VAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKT-SVADVLKA 330
A +L KQIR HS+P GDG QRLAH FANGLEARL+GT + + +SK S A VLKA
Sbjct: 362 CAGQLLKQIRLHSTPFGDGNQRLAHCFANGLEARLAGTGSQIYK-GIVSKPRSAAAVLKA 420
Query: 331 YIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPP 390
+ ++++ PFRK S F+TN+ I + +VH+IDFGI YGFQWP I R F G P
Sbjct: 421 HQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHR--FSMYGSP 478
Query: 391 KIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRD 450
K+RITGIE P+PGFRPA+RVEETG RL A+ VPFEY AIA+KW+ I+L+DL IDRD
Sbjct: 479 KVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRD 538
Query: 451 EVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKE 510
E+TVV C+YR L D++ +S RD VL LI +INPDLFV G+ NG YN+PFFV+RF+E
Sbjct: 539 EITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFRE 598
Query: 511 AMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRN 570
A+FHFS++FDMLE VP ED+ R+ E EVFGR A+NV+ACEG ER++ PETY+QW R
Sbjct: 599 ALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPETYKQWHVRA 658
Query: 571 LRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWKP 626
+R+G Q+P D +++ V YHKDF +D++ +W+LQGWKG+ + ALS WKP
Sbjct: 659 MRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMALSVWKP 714
Score = 145 (56.1 bits), Expect = 2.9e-131, Sum P(2) = 2.9e-131
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 57 ENVNFSYAVFKYINDILMEEDVASNTCMLQDCLALQATEKSFYDVLGQQYPPSPNQ 112
++ +FS AV YI+ +L EED+ CMLQ+ L L+A E+S Y+ +G++YPPSP +
Sbjct: 73 DDFDFSDAVLGYISQMLNEEDMDDKVCMLQESLDLEAAERSLYEAIGKKYPPSPER 128
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 1119 (399.0 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 219/401 (54%), Positives = 281/401 (70%)
Query: 229 KTK-IKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPD 287
KT+ +KGS++R +Q + + VD+ +LL QCAQA AS DQR A E K+IR+HSS
Sbjct: 187 KTRHVKGSSNRY----KQQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRH 242
Query: 288 GDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFL 347
GD TQRL ++FA LEAR++GT T S A S+TS+ D+LKAY ++ A P F
Sbjct: 243 GDATQRLGYHFAEALEARITGTMTTPIS-ATSSRTSMVDILKAYKGFVQACPTLIMCYFT 301
Query: 348 TNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPA 407
NR I + KAT +HIIDFGI YGFQWPC IQ S R GPP +R+TGIELP+ GFRP+
Sbjct: 302 ANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPS 361
Query: 408 ERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDD 467
ERVEETG RLK+ ++ NVPFEYS IA+ WE I LDDL I+ E TVV C+ RL Y PD+
Sbjct: 362 ERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDE 421
Query: 468 TQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVP 527
T +S RD L+L + INPDLFV NGTYNSPFF++RF+EA+FH S+LFDM E T+
Sbjct: 422 TVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLS 481
Query: 528 TEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRR 587
+D R + ERE+ R AM+V+ACEG ER PETY+QWQ R LRAGFR + +++++
Sbjct: 482 EDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLSKQIVKD 541
Query: 588 VKKMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWKPVQ 628
K++VK YHKDF +D + WM QGWKG++LYA+S WKP +
Sbjct: 542 GKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWKPAK 582
Score = 150 (57.9 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 65 VFKYINDILMEEDVASNTCMLQDCLALQATEKSFYDVLGQQYPPS 109
VFKYIND+LMEED+ +CML+D LALQA E+SF++VL Q P S
Sbjct: 62 VFKYINDMLMEEDLEGQSCMLEDSLALQAAERSFFEVLQDQTPIS 106
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 231/483 (47%), Positives = 318/483 (65%)
Query: 158 GSRGRKI-HQIDDRDFLDEGRSNKQLVPLLEEAVRCDMFVE--VMIPKGGSYDSVQCPLF 214
G RK H+ D+ D L+ R NKQ + E + +E +++ K + + +
Sbjct: 136 GESQRKYRHRNDEEDDLENNRRNKQPAIFVSEMEELAVKLEHVLLVCKTNQEEEEERTVI 195
Query: 215 --EAARNRAARNLPCDKTKIKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAAASNDQRV 272
++ NRA R KGS+++ + NT VDL SLLTQCAQA AS DQR
Sbjct: 196 TKQSTPNRAGR--------AKGSSNK--SKTHKTNT---VDLRSLLTQCAQAVASFDQRR 242
Query: 273 AIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKT-SVADVLKAY 331
A + K+IR HSS +GDGTQRLA YFA LEAR++G +P S F S T S+ D+LKAY
Sbjct: 243 ATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAY 302
Query: 332 IVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPK 391
+++ P F N+ I + KATK+HI+DFG+ YGFQWPC ++ S RPGGPP
Sbjct: 303 KLFVHTCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPM 362
Query: 392 IRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDE 451
+R+TGIELP+ GFRP++RVEETG RLK+ ++ NVPFE++ IA+KWETI LD+L I+ E
Sbjct: 363 LRVTGIELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGE 422
Query: 452 VTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEA 511
TVV C++RL Y PD+T DS RD VL+L + INPDLFV NG YNSPFF++RF+EA
Sbjct: 423 TTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREA 482
Query: 512 MFHFSALFDMLEATVPTEDQ--GRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSR 569
+FH+S+LFDM + T+ ED+ R + ERE+ R AM+V++CEG ER PETY+QW+ R
Sbjct: 483 LFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVR 542
Query: 570 NLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWKPVQD 629
LRAGF+ + +++++ K++V+ YH+DF +D + WMLQGWKG+++YA S WKP +
Sbjct: 543 ILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWKPAEK 602
Query: 630 SQN 632
N
Sbjct: 603 FTN 605
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 994 (355.0 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
Identities = 213/480 (44%), Positives = 302/480 (62%)
Query: 159 SRGRKIH--QIDDRDFLDEGRS-NKQLVPLLEEAVRCDMFVEVMIPKGGSYDSVQC-P-L 213
S+ RK H + ++ D L+E R +KQ E+ +MF +V++ G +C P +
Sbjct: 235 SKTRKNHHEREEEEDDLEEARRRSKQFAVNEEDGKLTEMFDKVLLLDG------ECDPQI 288
Query: 214 FEAARNRAARNLPCDKTKIKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAAASNDQRVA 273
E N GS+ +++ R S VD +LLT CAQ+ ++ D+ A
Sbjct: 289 IEDGEN--------------GSSKALVKKGRAKKKSRAVDFRTLLTLCAQSVSAGDKITA 334
Query: 274 IELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSG-TRT---PYFSPAFISKTSVADVLK 329
+L +QIR+ SP GD +QRLAH+FAN LEARL G T T Y+ K + A +LK
Sbjct: 335 DDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILK 394
Query: 330 AYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGP 389
+Y V++SASPF F +N+MI + A+ +HI+DFGI YGFQWP FIQ S G
Sbjct: 395 SYSVFLSASPFMTLIYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGL 454
Query: 390 PKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQK-WETIKLDDLKID 448
K+RITGIE+P+ G RP ER+++TG RL + +R VPFEY+AIA K WETIK+++ KI
Sbjct: 455 RKLRITGIEIPQHGLRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIR 514
Query: 449 RDEVTVVTCMYRLNYLPDDTQ-VKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSR 507
+EV V + R L D +D RD L+LI+ +NP++F+ NG++N+PFF +R
Sbjct: 515 PNEVLAVNAVLRFKNLRDVIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTR 574
Query: 508 FKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQ 567
FKEA+FH+SALFD+ AT+ E+ R+ +E E +GR MNV+ACEG++R++ PETY+QWQ
Sbjct: 575 FKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQ 634
Query: 568 SRNLRAGFRQLPVDQELLRRVK-KMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWKP 626
R +RAGF+Q PV+ EL++ + KM K YHKDF +DE+ W LQGWKG+IL++ S W P
Sbjct: 635 VRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFSSSCWVP 694
Score = 83 (34.3 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 57 ENVNFSYAVFKYINDILMEEDVASNTCMLQDCLALQATEKSFYDVLGQQYPPS--PN 111
+ ++ + KY+N +LMEE +A + D LAL+ TE+ V+ S PN
Sbjct: 61 DEIDSENTLLKYVNQLLMEESLAEKQSIFYDSLALRQTEEMLQQVISDSQTQSSIPN 117
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 120/376 (31%), Positives = 194/376 (51%)
Query: 253 DLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTP 312
DL +L +CA+A + D + L Q++Q S G+ QRL Y GL ARL+ + +
Sbjct: 226 DLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSS 285
Query: 313 YFSPAFISKTSVADVLKAYI-VYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISY 371
+ A K L Y+ + A P+ K N I + + + VHIIDF IS
Sbjct: 286 IYK-ALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQ 344
Query: 372 GFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431
G QW I+ RPGGPP +RITGI+ P F +E G RL K AE C VPFE+
Sbjct: 345 GGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFH 404
Query: 432 AIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDL-- 489
A ++++ L + E V L+++PD++ ++ RD +LRL+K ++P++
Sbjct: 405 GAALCCTEVEIEKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVT 464
Query: 490 FVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVL 549
V AN T +PF + RF E M H+ A+F+ ++ + + + R+ E+ R +N++
Sbjct: 465 LVEQEAN-TNTAPF-LPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLI 522
Query: 550 ACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWM 609
ACEG+ER + E +W+SR AGF+ P+ + +K +++ Y + + ++E +
Sbjct: 523 ACEGVEREERHEPLGKWRSRFHMAGFKPYPLSSYVNATIKGLLE-SYSEKYTLEERDGAL 581
Query: 610 LQGWKGKILYALSFWK 625
GWK + L W+
Sbjct: 582 YLGWKNQPLITSCAWR 597
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 110/374 (29%), Positives = 196/374 (52%)
Query: 253 DLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTP 312
DL + L CA+A + ND +A + +++RQ S G+ QRL Y GL A+L+ + +
Sbjct: 118 DLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSS 177
Query: 313 YFSPAFISKTSVADVLKAYI-VYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISY 371
+ + L +Y+ + P+ K N I + ++ +VHIIDF I
Sbjct: 178 IYKALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQ 237
Query: 372 GFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431
G QW IQ + RPGGPP+IRITGI+ + + G+RL K A++ NVPFE++
Sbjct: 238 GSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFN 297
Query: 432 AIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFV 491
+++ +K +L + E V + L+++PD++ ++ RD +LR++K ++P +
Sbjct: 298 SVSVSVSEVKPKNLGVRPGEALAVNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVT 357
Query: 492 HGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLAC 551
N+ F RF E M +++A+F+ ++ T+P + + R+ E+ R +N++AC
Sbjct: 358 LVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIAC 417
Query: 552 EGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQ 611
EG +R++ E +W+SR AGF P+ + +K +++ +Y + ++E +
Sbjct: 418 EGADRVERHELLGKWRSRFGMAGFTPYPLSPLVNSTIKSLLR-NYSDKYRLEERDGALYL 476
Query: 612 GWKGKILYALSFWK 625
GW + L A WK
Sbjct: 477 GWMHRDLVASCAWK 490
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 465 (168.7 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 119/385 (30%), Positives = 196/385 (50%)
Query: 247 NTSEVVDLSS---LLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLE 303
++ EVV ++ +L CA+A + A+ + ++RQ S GD +QR+A Y GL
Sbjct: 212 SSKEVVSQATPKQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLA 271
Query: 304 ARLSGTRTPYFSPAFISKTSVADV-LKAYIVYISASPFRKASNFLTNRMIGKTTEKATKV 362
AR++ + + A K +D L A V P K N I + + +V
Sbjct: 272 ARMAASGK-FIYRALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEV 330
Query: 363 HIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAE 422
HIIDF I+ G Q+ I+ + PG P++R+TGI+ PE R + G RL++ AE
Sbjct: 331 HIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAE 390
Query: 423 RCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI 482
V F++ A+ K + L E +V ++L+++PD++ + RD +L ++
Sbjct: 391 DNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPDESVTTVNQRDELLHMV 450
Query: 483 KRINPDLF--VHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREV 540
K +NP L V N T SPFF RF EA ++SA+F+ L+ T+P E Q R+ ER+
Sbjct: 451 KSLNPKLVTVVEQDVN-TNTSPFF-PRFIEAYEYYSAVFESLDMTLPRESQERMNVERQC 508
Query: 541 FGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDF 600
R +N++ACEG ERI+ E +W++R + AGF P+ ++ ++ ++K Y +
Sbjct: 509 LARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKY 568
Query: 601 DVDENGQWMLQGWKGKILYALSFWK 625
+ E + W+ K L S W+
Sbjct: 569 KLKEEMGELHFCWEEKSLIVASAWR 593
Score = 47 (21.6 bits), Expect = 2.6e-47, Sum P(2) = 2.6e-47
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 73 LMEEDVASNTCMLQDCLALQATEKSFYDVLGQQYPPSP 110
+ + D + N C+ D Q+ EK F D ++ P
Sbjct: 49 IFDPDRSKNPCLTDDSYPSQSYEKYFLDSPTDEFVQHP 86
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 110/375 (29%), Positives = 191/375 (50%)
Query: 253 DLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTP 312
DL +L CA+A + N+ +A ++R S G+ QRL Y GL ARL+ + +
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 313 YFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYG 372
+ + + L V P+ K N I + + ++HIIDF I G
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQG 168
Query: 373 FQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432
QW IQ + RPGG P IRITG+ G + RL+K A++ +VPF ++A
Sbjct: 169 SQWIALIQAFAARPGGAPNIRITGV-----G--DGSVLVTVKKRLEKLAKKFDVPFRFNA 221
Query: 433 IAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDL--F 490
+++ +++++L + E V Y L++LPD++ ++ RD +LR++K ++P +
Sbjct: 222 VSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPDESVSMENHRDRLLRMVKSLSPKVVTL 281
Query: 491 VHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLA 550
V N T SPF + RF E + +++A+F+ ++ +P + R+ E+ R +N++A
Sbjct: 282 VEQECN-TNTSPF-LPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIA 339
Query: 551 CEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWML 610
CEG ERI+ E +W+SR AGF P+ + ++ +++ DY + ++E +
Sbjct: 340 CEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLR-DYSNGYAIEERDGALY 398
Query: 611 QGWKGKILYALSFWK 625
GW +IL + WK
Sbjct: 399 LGWMDRILVSSCAWK 413
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 118/400 (29%), Positives = 203/400 (50%)
Query: 229 KTKIKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDG 288
+T+I+ S ++ D+ V L L CA+A N+ ++A L K + +S
Sbjct: 127 RTRIESELSSTRSVVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQA 186
Query: 289 DGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLT 348
+++A YFA GL R+ + ++ +S +D L+ + + + P+ K ++F
Sbjct: 187 GAMRKVATYFAEGLARRIYRI----YPRDDVALSSFSDTLQIH--FYESCPYLKFAHFTA 240
Query: 349 NRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAE 408
N+ I + A KVH+ID G+++G QWP IQ + RP GPP R+TGI G+ +
Sbjct: 241 NQAILEVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGI-----GYSLTD 295
Query: 409 RVEETGHRLKKAAERCNVPFEYSAIA-QKWETIKLDDLKIDRD-EVTVVTCMYRLNYLPD 466
++E G +L + A V FE+ +IA +K + L I E V ++ L+ L
Sbjct: 296 -IQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRL-- 352
Query: 467 DTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATV 526
S+ D L IK I PD+ +N F+ RF E++ ++S+LFD LE
Sbjct: 353 -LAHPGSI-DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLEGP- 409
Query: 527 PTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLR 586
P++D R++ E GR +N++ACEG +R++ ET QW++R GF+ + + +
Sbjct: 410 PSQD--RVMSEL-FLGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYK 466
Query: 587 RVKKMVKMDYHKD-FDVDENGQWMLQGWKGKILYALSFWK 625
+ ++ + D ++V+EN +L GW+ + L A S W+
Sbjct: 467 QASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 116/377 (30%), Positives = 186/377 (49%)
Query: 254 LSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPY 313
L + CA+ + S D A + QIR+ S GD T+R+A YF L RLS +P
Sbjct: 217 LLKAIYDCARISDS-DPNEASKTLLQIRESVSELGDPTERVAFYFTEALSNRLS-PNSPA 274
Query: 314 FSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGF 373
S S +S D++ +Y A P+ K ++ N+ I + TEK+ K+HI+DFGI G
Sbjct: 275 TSS---SSSSTEDLILSYKTLNDACPYSKFAHLTANQAILEATEKSNKIHIVDFGIVQGI 331
Query: 374 QWPCFIQRQSFRPGGPP-KIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432
QWP +Q + R G P +IR++GI P G P + TG+RL+ A+ ++ F++
Sbjct: 332 QWPALLQALATRTSGKPTQIRVSGIPAPSLGESPEPSLIATGNRLRDFAKVLDLNFDFIP 391
Query: 433 IAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492
I + ++D DEV V M +L L D+T ++ D LRL K +NP +
Sbjct: 392 ILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDETP---TIVDTALRLAKSLNPRVVTL 448
Query: 493 GVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACE 552
G + N F +R K A+ +SA+F+ LE + + + R+ ERE+FGR ++ E
Sbjct: 449 GEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLGRDSEERVRVERELFGRRISGLIGPE 508
Query: 553 --GLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMV-KMDYHKDFDVDENGQWM 609
G+ R + E QW+ AGF + + + + K ++ +Y + + E+
Sbjct: 509 KTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAVSQAKILLWNYNYSNLYSIVESKPGF 567
Query: 610 LQ-GWKGKILYALSFWK 625
+ W L LS W+
Sbjct: 568 ISLAWNDLPLLTLSSWR 584
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 115/384 (29%), Positives = 191/384 (49%)
Query: 246 DNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEAR 305
D+ V L L CA+A + VA L KQI + +++A YFA L R
Sbjct: 161 DSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARR 220
Query: 306 LSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHII 365
+ +P SP S++D L+ + + P+ K ++F N+ I + + +VH+I
Sbjct: 221 IYRL-SPSQSPI---DHSLSDTLQMH--FYETCPYLKFAHFTANQAILEAFQGKKRVHVI 274
Query: 366 DFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCN 425
DF +S G QWP +Q + RPGGPP R+TGI P P + + E G +L AE +
Sbjct: 275 DFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPPAPD--NFDYLHEVGCKLAHLAEAIH 332
Query: 426 VPFEYSA-IAQKWETIKLDDLKIDRDEV--TVVTCMYRLNYLPDDTQVKDSLRDAVLRLI 482
V FEY +A + L++ E+ V ++ L+ L + D VL ++
Sbjct: 333 VEFEYRGFVANTLADLDASMLELRPSEIESVAVNSVFELHKLLG----RPGAIDKVLGVV 388
Query: 483 KRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFG 542
+I P++F +NSP F+ RF E++ ++S LFD LE VP+ Q +++ E G
Sbjct: 389 NQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLEG-VPS-GQDKVMSE-VYLG 445
Query: 543 RHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKM-DYHKDFD 601
+ NV+AC+G +R++ ET QW++R AGF + ++ ++ + + + +
Sbjct: 446 KQICNVVACDGPDRVERHETLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYR 505
Query: 602 VDENGQWMLQGWKGKILYALSFWK 625
V+E+ ++ GW + L A S WK
Sbjct: 506 VEESDGCLMLGWHTRPLIATSAWK 529
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 428 (155.7 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 118/387 (30%), Positives = 193/387 (49%)
Query: 244 RQDNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLE 303
RQ E + L +LL QCA+A ++++ A +L +I Q S+P G QR+A YF+ +
Sbjct: 280 RQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMS 339
Query: 304 ARLSGTRTPYFS--PA-FISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKAT 360
ARL + ++ P+ ++ +T ++ A+ V+ SP K S+F N+ I + EK
Sbjct: 340 ARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKED 399
Query: 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKA 420
VHIID I G QWP + RPGGPP +R+TG+ G E ++ TG RL
Sbjct: 400 SVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGL-----G-TSMEALQATGKRLSDF 453
Query: 421 AERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLR 480
A++ +PFE+ +A+K + + L + + E V + Y D D+ L
Sbjct: 454 ADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQHSLY---DVTGSDA---HTLW 507
Query: 481 LIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREV 540
L++R+ P + V V ++ F+ RF EA+ ++SALFD L A+ E + R + E+++
Sbjct: 508 LLQRLAPKV-VTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQL 566
Query: 541 FGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDF 600
+ NVLA G R + + W+ + + GF+ + + + ++ M +
Sbjct: 567 LSKEIRNVLAVGGPSRSGEVK-FESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGY 625
Query: 601 D-VDENGQWMLQGWKGKILYALSFWKP 626
VD+NG L GWK L S W P
Sbjct: 626 TLVDDNGTLKL-GWKDLSLLTASAWTP 651
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 107/387 (27%), Positives = 184/387 (47%)
Query: 246 DNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEAR 305
D+ V L L CA+A + +A L K++ + ++A YFA L R
Sbjct: 172 DSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARR 231
Query: 306 LSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHII 365
+ T S +VL+ + + + P+ K ++F N+ I + A +VH+I
Sbjct: 232 IYRDYTAETDVCAAVNPSFEEVLEMH--FYESCPYLKFAHFTANQAILEAVTTARRVHVI 289
Query: 366 DFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCN 425
D G++ G QWP +Q + RPGGPP R+TGI P+ ++ +++ G +L + A+
Sbjct: 290 DLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQT--ENSDSLQQLGWKLAQFAQNMG 347
Query: 426 VPFEYSAIAQKWETIKLDDLKID------RDEVTVVTCMYRLNYLPDDTQVKDSLRDAVL 479
V FE+ +A + L DL+ + E VV ++ L+ L + + +L
Sbjct: 348 VEFEFKGLAAE----SLSDLEPEMFETRPESETLVVNSVFELHRL----LARSGSIEKLL 399
Query: 480 RLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYERE 539
+K I P + +N F+ RF EA+ ++S+LFD LE + Q R++ E
Sbjct: 400 NTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSE-V 458
Query: 540 VFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKD 599
GR +NV+A EG +R++ ET QW+ R AGF + + ++ ++ + D
Sbjct: 459 YLGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPIHLGSSAFKQASMLLSLYATGD 518
Query: 600 -FDVDENGQWMLQGWKGKILYALSFWK 625
+ V+EN ++ GW+ + L S WK
Sbjct: 519 GYRVEENDGCLMIGWQTRPLITTSAWK 545
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 407 (148.3 bits), Expect = 6.6e-38, P = 6.6e-38
Identities = 123/427 (28%), Positives = 206/427 (48%)
Query: 207 DSVQCPLFEAARNRAARNLP-CDKTKIKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAA 265
D +C + N+ R P CD + + S +L + T V L L CA+A
Sbjct: 115 DDDECCSSNSNSNKRIRLGPWCDSVTSESTRSVVLI----EETG--VRLVQALVACAEAV 168
Query: 266 ASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVA 325
+ +A L K++ ++ ++A YFA L R+ P S A I S
Sbjct: 169 QLENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYRIH-P--SAAAIDP-SFE 224
Query: 326 DVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFR 385
++L+ + + + P+ K ++F N+ I + + VH+ID G++ G QWP +Q + R
Sbjct: 225 EILQ--MNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALR 282
Query: 386 PGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDL 445
PGGPP R+TG+ P R E ++E G +L + A+ V F+++ + T +L DL
Sbjct: 283 PGGPPSFRLTGVG--NPSNR--EGIQELGWKLAQLAQAIGVEFKFNGLT----TERLSDL 334
Query: 446 KID------RDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTY 499
+ D E VV ++ L+ P +Q S+ + +L +K + P L +
Sbjct: 335 EPDMFETRTESETLVVNSVFELH--PVLSQ-PGSI-EKLLATVKAVKPGLVTVVEQEANH 390
Query: 500 NSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDN 559
N F+ RF EA+ ++S+LFD LE V Q R++ E GR +N++A EG +RI+
Sbjct: 391 NGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSE-VYLGRQILNLVATEGSDRIER 449
Query: 560 PETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKD-FDVDENGQWMLQGWKGKIL 618
ET QW+ R AGF + + + ++ ++ + D + V+EN ++ W+ K L
Sbjct: 450 HETLAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPL 509
Query: 619 YALSFWK 625
A S WK
Sbjct: 510 IAASAWK 516
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 399 (145.5 bits), Expect = 2.7e-35, P = 2.7e-35
Identities = 108/400 (27%), Positives = 190/400 (47%)
Query: 230 TKIKGSNSRILRMMRQDNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGD 289
T G ++R + ++ D+ V L L CA+A N+ +A L KQI +
Sbjct: 199 TTAAGESTRSVILV--DSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAG 256
Query: 290 GTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTN 349
+++A YFA L R+ P I ++D L+ + + P+ K ++F N
Sbjct: 257 AMRKVATYFAEALARRIYRLSPPQNQ---IDHC-LSDTLQMH--FYETCPYLKFAHFTAN 310
Query: 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAER 409
+ I + E +VH+IDF ++ G QWP +Q + R GGPP R+TGI P P ++
Sbjct: 311 QAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPD--NSDH 368
Query: 410 VEETGHRLKKAAERCNVPFEYSA-IAQKWETIKLD--DLKIDRDEVTVVTCMYRLNYLPD 466
+ E G +L + AE +V FEY +A + +L+ E V ++ L+ L
Sbjct: 369 LHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNSVFELHKLLG 428
Query: 467 DTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATV 526
+ + VL ++K+I P +F +N P F+ RF E++ ++S LFD LE
Sbjct: 429 ----RPGGIEKVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLEGVP 484
Query: 527 PTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLR 586
++D+ + G+ N++ACEG +R++ ET QW +R +G + +
Sbjct: 485 NSQDK---VMSEVYLGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAPAHLGSNAFK 541
Query: 587 RVKKMVKM-DYHKDFDVDENGQWMLQGWKGKILYALSFWK 625
+ ++ + + + + V+E+ ++ GW + L S WK
Sbjct: 542 QASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWK 581
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 256 (95.2 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 64/218 (29%), Positives = 108/218 (49%)
Query: 254 LSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPY 313
L LL CA AS + A +Q+ +SPDGD QR+A YF L R+ +
Sbjct: 54 LIHLLLTCANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGL 113
Query: 314 FSPAFISKT---SVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGIS 370
+ ++T +V++ + ++ P K S LTNR I + E VH+ID S
Sbjct: 114 YKALNATQTRTNNVSEEIHVRRLFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDAS 173
Query: 371 YGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEY 430
QW +Q + RP GPP +RITG+ E +E+ HRL + AE+ ++PF++
Sbjct: 174 EPAQWLALLQAFNSRPEGPPHLRITGVH------HQKEVLEQMAHRLIEEAEKLDIPFQF 227
Query: 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLN-YLPDD 467
+ + + + + ++ L++ E V+ + +L+ +L D
Sbjct: 228 NPVVSRLDCLNVEQLRVKTGEALAVSSVLQLHTFLASD 265
Score = 197 (74.4 bits), Expect = 3.4e-35, Sum P(2) = 3.4e-35
Identities = 40/150 (26%), Positives = 77/150 (51%)
Query: 476 DAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLI 535
D+ L I ++P + V + +N + R E+++ ++ALFD LE VP Q R+
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 536 YEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMD 595
E+ +FG N+++CEG ER + E +W R AGF +P+ + + +++++
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449
Query: 596 YHKDFDVDENGQWMLQGWKGKILYALSFWK 625
+ + E + W+ + LY++S W+
Sbjct: 450 GFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 362 (132.5 bits), Expect = 5.0e-31, P = 5.0e-31
Identities = 102/355 (28%), Positives = 169/355 (47%)
Query: 279 QIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISAS 338
+I++ S GD QR+ +YFA EA LS T SP+ S +S+ D + +Y A
Sbjct: 197 RIKESVSESGDPIQRVGYYFA---EA-LSHKETE--SPSSSSSSSLEDFILSYKTLNDAC 250
Query: 339 PFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPP-KIRITGI 397
P+ K ++ N+ I + T ++ +HI+DFGI G QW +Q + R G P +IRI+GI
Sbjct: 251 PYSKFAHLTANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGI 310
Query: 398 ELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTC 457
P G P + TG+RL+ A ++ FE+ + + + ++D DEV VV
Sbjct: 311 PAPSLGDSPGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNF 370
Query: 458 MYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSA 517
M L L D+T LRL + +NP + G + N F +R K ++ +SA
Sbjct: 371 MLELYKLLDETATTVG---TALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSA 427
Query: 518 LFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLE-----RIDNPETYRQWQSRNLR 572
+F+ LE + + + RL ER +FGR M+++ + R E QW+ +
Sbjct: 428 VFESLEPNLDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEK 487
Query: 573 AGFRQLPVDQELLRRVKKMV-KMDYHKDFDVDENGQWMLQ-GWKGKILYALSFWK 625
AGF + + + K ++ +Y + + E+ + W L +S W+
Sbjct: 488 AGFEPVKPSNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 309 (113.8 bits), Expect = 7.1e-30, Sum P(2) = 7.1e-30
Identities = 88/323 (27%), Positives = 153/323 (47%)
Query: 318 FISKTSVADVLKAYIVYISA-SPFRKASNFLTNRMIGKTTEKATK--VHIIDFGISYGFQ 374
F +K + +D Y ++++ +PF + + N+ I TE +HI+D IS G Q
Sbjct: 132 FRTKNNNSDFESCYYLWLNQLTPFIRFGHLTANQAILDATETNDNGALHILDLDISQGLQ 191
Query: 375 WPCFIQ---RQSFRPGGPP-KIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEY 430
WP +Q +S P PP +RITG G R + TG RL + A+ + F++
Sbjct: 192 WPPLMQALAERSSNPSSPPPSLRITGC-----G-RDVTGLNRTGDRLTRFADSLGLQFQF 245
Query: 431 SAIAQKWET-------IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIK 483
+ E I+L L + E V C++ L+ + +D D + L IK
Sbjct: 246 HTLVIVEEDLAGLLLQIRLLALSAVQGETIAVNCVHFLHKIFNDDG--DMIGH-FLSAIK 302
Query: 484 RINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGR 543
+N + + F++RF EA+ H+ A+FD LEAT+P + RL E+ FG+
Sbjct: 303 SLNSRIVTMAEREANHGDHSFLNRFSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGK 362
Query: 544 HAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKD-FDV 602
++V+A E ER + W+ R GF +P+ L + K ++++ Y + +++
Sbjct: 363 EILDVVAAEETERKQRHRRFEIWEEMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNL 422
Query: 603 DENGQWMLQGWKGKILYALSFWK 625
+ GW+ + L+++S WK
Sbjct: 423 QFLNNSLFLGWQNRPLFSVSSWK 445
Score = 77 (32.2 bits), Expect = 7.1e-30, Sum P(2) = 7.1e-30
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 248 TSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLS 307
TS L LL A + ++ A L + +SSP GD T+RL H F L R++
Sbjct: 35 TSASHHLRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRIN 94
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 351 (128.6 bits), Expect = 3.0e-29, P = 3.0e-29
Identities = 115/392 (29%), Positives = 180/392 (45%)
Query: 253 DLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQ-RLAHYFANGLEARLSGTRT 311
+L +LLT C A S + + +SP G RL Y+ L R++
Sbjct: 273 ELVNLLTGCLDAIRSRNIAAINHFIARTGDLASPRGRTPMTRLIAYYIEALALRVARMWP 332
Query: 312 PYFS---PAFISKTSVADVLKAYIVYIS-ASPFRKASNFLTNRMIGKTTEKATKVHIIDF 367
F P +T V D + +++ +P K +F N M+ + E +VHIIDF
Sbjct: 333 HIFHIAPPREFDRT-VEDESGNALRFLNQVTPIPKFIHFTANEMLLRAFEGKERVHIIDF 391
Query: 368 GISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427
I G QWP F Q + R P +RITGI G E + ETG RL AE N+
Sbjct: 392 DIKQGLQWPSFFQSLASRINPPHHVRITGI-----GESKLE-LNETGDRLHGFAEAMNLQ 445
Query: 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNY-LPDDTQVKDSLRDAVLRLIKRIN 486
FE+ + + E ++L L + E V C+ +++ L D T ++RD L LI+ N
Sbjct: 446 FEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDGTGA--AIRD-FLGLIRSTN 502
Query: 487 PDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAM 546
P V +NS +R ++ ++SA+FD + + T+ R+ E +FGR
Sbjct: 503 PIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIR 562
Query: 547 NVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKD----FDV 602
N++ACEG R + +R W+ + GFR L V + + + K +++M Y D F+V
Sbjct: 563 NIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQSKMLLRM-YGSDNEGFFNV 621
Query: 603 D----ENGQWMLQG------WKGKILYALSFW 624
+ +NG +G W + LY +S W
Sbjct: 622 ERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 327 (120.2 bits), Expect = 7.3e-29, P = 7.3e-29
Identities = 116/389 (29%), Positives = 171/389 (43%)
Query: 245 QDNTSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEA 304
+++ + + L SLL QCA+ A++ R A L +I + SP G +R+ YFA L+
Sbjct: 31 ENDGAAAIKLLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQT 90
Query: 305 R-----LSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKA 359
R LSG +P S ++ + A Y S SP K S+F N+ I + +
Sbjct: 91 RVISSYLSGACSP-LSEKPLTVVQSQKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGE 149
Query: 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKK 419
VHIID + G QWP + RP IRITG G ++ + TG RL
Sbjct: 150 DSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGF-----G-SSSDLLASTGRRLAD 203
Query: 420 AAERCNVPFEYSAIAQK-WETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAV 478
A N+PFE+ I I L + E VV M Y D T ++L
Sbjct: 204 FASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAVVVHWMQHRLY--DVTG--NNLE--T 257
Query: 479 LRLIKRINPDLFVHGVANGTYNSP-FFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYE 537
L +++R+ P+L +Y+ F+ RF EA+ ++SALFD L + E R E
Sbjct: 258 LEILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVE 317
Query: 538 REVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYH 597
+ V G N++A G R +W+ R GFR + + + ++ M
Sbjct: 318 QIVLGTEIRNIVAHGGGRR-----KRMKWKEELSRVGFRPVSLRGNPATQAGLLLGMLPW 372
Query: 598 KDFD-VDENGQWMLQGWKGKILYALSFWK 625
+ V+ENG L GWK L S WK
Sbjct: 373 NGYTLVEENGTLRL-GWKDLSLLTASAWK 400
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 318 (117.0 bits), Expect = 7.1e-28, P = 7.1e-28
Identities = 106/392 (27%), Positives = 181/392 (46%)
Query: 254 LSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPY 313
+ LL CA A SND + ++ + + PDGD TQRL F L +R + ++TP
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSR-AVSKTPT 85
Query: 314 FSPAFISKTSVADVLKAYIV-----YISASPFRKASNFLTNRMIGKTTEKATKVHIIDFG 368
S IS AD L + V ++ +P+ + N I E + VHI+D
Sbjct: 86 LSST-ISFLPQADELHRFSVVELAAFVDLTPWHRFGFIAANAAILTAVEGYSTVHIVDLS 144
Query: 369 ISYGFQWPCFIQRQSFRPGGPPKI-RITGIELPEPGFRPAERV--EETGHRLKKAAERCN 425
+++ Q P I + R PP + ++T + + F P + EE G +L A N
Sbjct: 145 LTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDH-FPPFINISYEELGSKLVNFATTRN 203
Query: 426 VPFEYSAIAQKWE---TIKLDDLKI---DRDEVTVVTCMYRLNYLPDD--TQVKDSLRDA 477
+ E++ + + + L L+I +E VV C L Y+P++ T SLR
Sbjct: 204 ITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCHMMLRYIPEEPLTSSSSSLRTV 263
Query: 478 VLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYE 537
L+ ++ +NP + + S V+R K A +F FD + T +E R YE
Sbjct: 264 FLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFWIPFDTTD-TFMSEQ--RRWYE 320
Query: 538 REVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYH 597
E+ + NV+A EG ER++ ET R+W R A F + V ++ + VK M++ ++
Sbjct: 321 AEISWK-IENVVAKEGAERVERTETKRRWIERMREAEFGGVRVKEDAVADVKAMLE-EHA 378
Query: 598 KDFDV--DENGQWMLQGWKGKILYALSFWKPV 627
+ + +++ + ++ WKG + + W P+
Sbjct: 379 VGWGMKKEDDDESLVLTWKGHSVVFATVWVPI 410
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 319 (117.4 bits), Expect = 2.8e-26, P = 2.8e-26
Identities = 112/397 (28%), Positives = 175/397 (44%)
Query: 249 SEVVDLSSLLTQCAQAA--ASNDQRVAIELSKQIRQHSSPDGDGT--QRLAHYFANGLEA 304
S+ + L LL A A+ A+ + + + +++ SP GD T +RLA +F NGL
Sbjct: 99 SKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVSP-GDRTNMERLAAHFTNGLSK 157
Query: 305 RLSGTRTPYFSPAFISKTSV---ADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATK 361
L R P + V ADV+ A+ + + SP+ + I + + +
Sbjct: 158 LLE--RDSVLCPQQ-HRDDVYDQADVISAFELLQNMSPYVNFGYLTATQAILEAVKYERR 214
Query: 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPK--IRITGIELPEPGFRPAERVEETGHRLKK 419
+HI+D+ I+ G QW +Q R GP +RIT + G + V+ETG RL
Sbjct: 215 IHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVAAVQETGRRLTA 274
Query: 420 AAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVL 479
A+ PF Y LK+ R E V+ CM +LP + S + L
Sbjct: 275 FADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVINCML---HLPRFSHQTPSSVISFL 331
Query: 480 RLIKRINPDL--FVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYE 537
K +NP L VH G + F+ RF + + FSA+FD LEA + + R E
Sbjct: 332 SEAKTLNPKLVTLVHEEV-GLMGNQGFLYRFMDLLHQFSAIFDSLEAGLSIANPARGFVE 390
Query: 538 REVFGRHAMNVLA--CEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMD 595
R G N L +++ ++ QW N GF+ L V + K ++ +
Sbjct: 391 RVFIGPWVANWLTRITANDAEVESFASWPQWLETN---GFKPLEVSFTNRCQAKLLLSL- 446
Query: 596 YHKDFDVDENGQ-WMLQGWKGKILYALSFWKPVQDSQ 631
++ F V+E GQ ++ GWK + L + SFW Q +Q
Sbjct: 447 FNDGFRVEELGQNGLVLGWKSRRLVSASFWASCQTNQ 483
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 296 (109.3 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 95/391 (24%), Positives = 177/391 (45%)
Query: 256 SLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGT-----R 310
S+L + A+A + D A ++ + + SSP GD Q+LA YF L R++G+ R
Sbjct: 145 SVLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYR 204
Query: 311 TPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGIS 370
T + A S K + + SP+ + N I + + K+HI+D +
Sbjct: 205 TMVTAAATEKTCSFESTRKTVLKFQEVSPWATFGHVAANGAILEAVDGEAKIHIVDISST 264
Query: 371 YGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRP---AERV-EETGHRLKKAAERCNV 426
+ QWP ++ + R P +R+T + + + R+ +E G+R++K A V
Sbjct: 265 FCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVNDQTASHRMMKEIGNRMEKFARLMGV 324
Query: 427 PFEYSAIAQKWETIKLD--DLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKR 484
PF+++ I + + D +L + DEV + C+ ++ + + S RDAV+ +R
Sbjct: 325 PFKFNIIHHVGDLSEFDLNELDVKPDEVLAINCVGAMHGIAS----RGSPRDAVISSFRR 380
Query: 485 INPDLF--VHGVAN--GTYNSPF---FVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYE 537
+ P + V A+ G F F+ F E + F F+ E + P RL+ E
Sbjct: 381 LRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGECLRWFRVCFESWEESFPRTSNERLMLE 440
Query: 538 REVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYH 597
R GR ++++ACE + + ET R+W R +GF + E+ V+ +++
Sbjct: 441 RAA-GRAIVDLVACEPSDSTERRETARKWSRRMRNSGFGAVGYSDEVADDVRALLRRYKE 499
Query: 598 KDFDVDE--NGQWMLQGWKGKILYALSFWKP 626
+ + + + + W+ + + S W+P
Sbjct: 500 GVWSMVQCPDAAGIFLCWRDQPVVWASAWRP 530
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 296 (109.3 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 93/395 (23%), Positives = 174/395 (44%)
Query: 248 TSEVVDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLEARLS 307
T+ V +++ + A A A +A E+ ++ Q + + + ++L + L +R++
Sbjct: 260 TTSVCSRQTVM-EIATAIAEGKTEIATEILARVSQTPNLERNSEEKLVDFMVAALRSRIA 318
Query: 308 GTRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMI---GKTTEKATKV-H 363
T + + T ++Y SP K N I + + H
Sbjct: 319 SPVTELYGKEHLISTQ--------LLY-ELSPCFKLGFEAANLAILDAADNNDGGMMIPH 369
Query: 364 IIDFGISYGFQWPCFIQRQSFRPGGP------PKIRITGIE------LPEPGFRPAERVE 411
+IDF I G Q+ ++ S R G P ++IT + L + G ER++
Sbjct: 370 VIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGE--ERLK 427
Query: 412 ETGHRLKKAAERCNVPFEYSAIAQ-KWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQV 470
G L + +R + ++ + + + + L D DE V ++L +PD++
Sbjct: 428 AVGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVC 487
Query: 471 KDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTED 530
++ RD +LR +K + P + N+ F+ R E+ + AL + +E+TVP+ +
Sbjct: 488 TENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTN 547
Query: 531 QGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKK 590
R E E GR +N +ACEG++RI+ E + +W+ R AGF +P+ +++ +K
Sbjct: 548 SDRAKVE-EGIGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKS 606
Query: 591 MVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWK 625
H F V E+ + GW G+ L S W+
Sbjct: 607 RGNR-VHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 169 (64.5 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 48/181 (26%), Positives = 84/181 (46%)
Query: 257 LLTQCAQAAASNDQRVAIELSKQI-RQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFS 315
LL CA D A ++ + +SP GD RLA++FA L R+ + +
Sbjct: 53 LLLACADLLQRGDLPAARRAAEIVLAAAASPRGDAADRLAYHFARALALRVDA-KAGHGH 111
Query: 316 PAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQW 375
+ AY+ + +PF + ++ N+ I + + A +VHI+D +G QW
Sbjct: 112 VVVGGGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQW 171
Query: 376 PCFIQRQSFR--PG-GPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432
P +Q + R P GPP++R+TG + + TG+RL+ A ++PF ++
Sbjct: 172 PPLLQAIAERADPALGPPEVRVTGAGADR------DTLLRTGNRLRAFARSIHLPFHFTP 225
Query: 433 I 433
+
Sbjct: 226 L 226
Score = 136 (52.9 bits), Expect = 5.5e-19, Sum P(2) = 5.5e-19
Identities = 53/190 (27%), Positives = 84/190 (44%)
Query: 445 LKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFV------HGVANGT 498
L+ DE V C+ L+ L D L A L+ +K ++P + G G
Sbjct: 258 LEFHPDETLAVNCVMFLHNLAGH----DELA-AFLKWVKAMSPAVVTIAEREAGGGGGGG 312
Query: 499 YNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERID 558
+ R AM H+SA+F+ LEATVP + RL E+EV GR + G
Sbjct: 313 DHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEAAVGPSGGRWWR 372
Query: 559 NPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKD-FDVDE-NGQWMLQGWKGK 616
E +W AGF P+ + + + ++++ Y + + V E G L GW+ +
Sbjct: 373 GIE---RWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEARGACFL-GWQTR 428
Query: 617 ILYALSFWKP 626
L ++S W+P
Sbjct: 429 PLLSVSAWQP 438
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 223 (83.6 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 96/393 (24%), Positives = 161/393 (40%)
Query: 245 QDNTSEVVDLSSLLTQCAQA-AASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFANGLE 303
+D E LL CA A ASN RV L + + +S GD +RLA + L+
Sbjct: 136 KDGNKEGRWAEKLLNPCALAITASNSSRVQHYLCV-LSELASSSGDANRRLAAFGLRALQ 194
Query: 304 ARLSGTR-TPYFSPAF-ISKTSVADVLKAYIVYISASPFRKASNFLTN----RMIGKTTE 357
LS + + F P F + V K + + SP+ N + N +++ + +
Sbjct: 195 HHLSSSSVSSSFWPVFTFASAEVKMFQKTLLKFYEVSPWFALPNNMANSAILQILAQDPK 254
Query: 358 KATKVHIIDFGISYGFQWPCFIQRQSFR-PGGPPKIRITGIE--LPEPGFRPAERVEETG 414
+HIID G+S+G QWP ++ S R G PP++RIT I + F G
Sbjct: 255 DKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGPPGYNYG 314
Query: 415 HRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSL 474
+L A + + S + KL + E +V +RL++L + D
Sbjct: 315 SQLLGFARSLKINLQISVLD------KLQLIDTSPHENLIVCAQFRLHHLKHS--INDE- 365
Query: 475 RDAVLRLIKRINPDLFVHGVANGTYNSPF-FVSRFKEAMFHFSALFDMLEATVPTEDQGR 533
R L+ ++ + P V NG +S F + F + + + D + E+
Sbjct: 366 RGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFKEENSE- 424
Query: 534 LIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMV- 592
ER++ A VL G D E +W R AGF +++ + K ++
Sbjct: 425 ---ERKLMEGEATKVLMNAG----DMNEGKEKWYERMREAGFFVEAFEEDAVDGAKSLLR 477
Query: 593 KMDYHKDFDVDENGQWMLQGWKGKILYALSFWK 625
K D + + +++ + WKG+ + S WK
Sbjct: 478 KYDNNWEIRMEDGDTFAGLMWKGEAVSFCSLWK 510
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 177 (67.4 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 87/379 (22%), Positives = 154/379 (40%)
Query: 252 VDLSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQRLAHYFA---NGLEARLSG 308
V ++ L + A+ S+ L++ +Q SSP G +R A YF N L +S
Sbjct: 203 VGITEQLVKAAEVIESDTCLAQGILARLNQQLSSPVGKPLERAAFYFKEALNNLLHNVSQ 262
Query: 309 TRTPYFSPAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFG 368
T PY + I K + AY + SP + +NF +N+ + ++ ++HIIDF
Sbjct: 263 TLNPY---SLIFK------IAAYKSFSEISPVLQFANFTSNQALLESFHGFHRLHIIDFD 313
Query: 369 ISYGFQWPCFIQRQSFRPGGPP-KIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427
I YG QW +Q R P ++IT P + T LK A N+
Sbjct: 314 IGYGGQWASLMQELVLRDNAAPLSLKIT--VFASPANHDQLELGFTQDNLKHFASEINIS 371
Query: 428 FEYSAIA-QKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRIN 486
+ ++ +I + +++ V V ++LP VLR +K ++
Sbjct: 372 LDIQVLSLDLLGSISWPNSS-EKEAVAVNISAASFSHLP-----------LVLRFVKHLS 419
Query: 487 PDLFVHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAM 546
P + V F + ++ +ALF+ L+A D + I ER + + +
Sbjct: 420 PTIIVCSDRGCERTDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKI-ERFLI-QPEI 477
Query: 547 NVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENG 606
L + I+ P WQ+ L+ GF + + + +V+ + F V++
Sbjct: 478 EKLVLDRSRPIERP--MMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKH 535
Query: 607 QWMLQGWKGKILYALSFWK 625
+L W+ L +S W+
Sbjct: 536 NSLLLCWQRTELVGVSAWR 554
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 147 (56.8 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 48/183 (26%), Positives = 86/183 (46%)
Query: 389 PPKIRITGIELPEPGFRPAERV----EETGHRLKKAAERCNVPFEYSAIAQKWE---TIK 441
PP +++T I + F P + EE G +L A NV E+ I+ + +
Sbjct: 19 PPLLKLTVIA-SDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSL 77
Query: 442 LDDLKIDR---DEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGT 498
++ L+ID +E VV C L+Y+PD+ + +LR L+ ++ +NP + +
Sbjct: 78 IEQLRIDPFVFNEALVVNCHMMLHYIPDEI-LTSNLRSVFLKELRDLNPTIVTLIDEDSD 136
Query: 499 YNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERID 558
+ S F+SR + + +D E + + R YE ++ + NV+A EG ER++
Sbjct: 137 FTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWK-IDNVVAKEGAERVE 195
Query: 559 NPE 561
E
Sbjct: 196 RLE 198
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 164 (62.8 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 80/375 (21%), Positives = 161/375 (42%)
Query: 258 LTQCAQAAASNDQRVA-IELSKQIRQHSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSP 316
L + S++ ++A + LS+ ++ SP G QR A YF L + L+G+ +P
Sbjct: 126 LIRVVDCVESDELQLAQVVLSRLNQRLRSPAGRPLQRAAFYFKEALGSFLTGSNR---NP 182
Query: 317 AFISKTS-VADVLKAYIVYISASPFRKASNFLTNRMI--GKTTEKATK-VHIIDFGISYG 372
+S S + ++A Y SP S+F N+ I +++ ++ VH++DF I +G
Sbjct: 183 IRLSSWSEIVQRIRAIKEYSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFG 242
Query: 373 FQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432
Q+ ++ + + +R+T + E V+E L + A + F+
Sbjct: 243 GQYASLMREITEKSVSGGFLRVTAVVAEECAVE-TRLVKEN---LTQFAAEMKIRFQIEF 298
Query: 433 IAQK-WETIKLDDLKIDRDEVTVVTCMYRL-NYLPDDTQVKDSLRDAVLRLIKRINPDLF 490
+ K +E + ++ E TVV + L T ++LR +++ ++ + +
Sbjct: 299 VLMKTFEMLSFKAIRFVEGERTVVLISPAIFRRLSGITDFVNNLRRVSPKVVVFVDSEGW 358
Query: 491 VHGVANGTYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLA 550
+G++ F VS A+ ++ + + L+A P D + I E V R ++
Sbjct: 359 TEIAGSGSFRREF-VS----ALEFYTMVLESLDAAAPPGDLVKKIVEAFVL-RPKISAAV 412
Query: 551 CEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWML 610
+R E W+ AG R + + Q + + +++ + F V + ++
Sbjct: 413 ETAADRRHTGEM--TWREAFCAAGMRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELV 470
Query: 611 QGWKGKILYALSFWK 625
W G+ L A S W+
Sbjct: 471 LCWHGRALVATSAWR 485
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 163 (62.4 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 80/351 (22%), Positives = 149/351 (42%)
Query: 283 HSSPDGDGTQRLAHYFANGLEARLSGTRTPYFSPAFISKTSVADVLKAYIVYISASPFRK 342
H SP QR A + A EA LS SP I+ ++ + AY + SPF +
Sbjct: 310 HKSP----FQRAASHIA---EALLSLIHNES-SPPLITPENLILRIAAYRSFSETSPFLQ 361
Query: 343 ASNFLTNRMIGKTTEKA--TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL- 399
NF N+ I ++ ++ ++HIIDF + YG QW +Q + GG + R + ++L
Sbjct: 362 FVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLMQELASGVGGRRRNRASSLKLT 421
Query: 400 ---PEPGFRPAE-RVEETGHRLKKAAERCNVPFEYSAIA-QKWETIKLDDLKIDRDEVTV 454
P P E + T LK A +PFE ++ + L + E
Sbjct: 422 VFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLSVELLLNPAYWPLSLRSSEKEA 481
Query: 455 VTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPFFVSRFKEAMFH 514
+ +N LP ++ V +LR +K+++P++ V N F + ++ +
Sbjct: 482 IA----VN-LPVNS-VASGYLPLILRFLKQLSPNIVVCSDRGCDRNDAPFPNAVIHSLQY 535
Query: 515 FSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAG 574
++L + L+A +D ER + + ++ L + I+ W+ + G
Sbjct: 536 HTSLLESLDANQNQDDSS---IER-FWVQPSIEKLLMKRHRWIERSPP---WRILFTQCG 588
Query: 575 FRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQGWKGKILYALSFWK 625
F + Q + + +++ + + F V++ ++ W+ K L +S WK
Sbjct: 589 FSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWK 639
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 157 (60.3 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 87/402 (21%), Positives = 163/402 (40%)
Query: 245 QDNTSEVVD-LSSLLTQCAQAAASNDQRVAIELSKQIRQHSSPDGDGTQ--------RLA 295
QD ++ ++D L S + N+ +A + ++ + + + D T R A
Sbjct: 237 QDQSAVIIDQLFSAAAELTTNGGDNNPVLAQGILARLNHNLNNNNDDTNNNPKPPFHRAA 296
Query: 296 HYFANGLEARLSGTRTPYFSPAFISKT-SVADVLKAYIVYISASPFRKASNFLTNRMIGK 354
Y L + L + SP +S ++ + AY + SPF + NF N+ I +
Sbjct: 297 SYITEALHSLLQDSS---LSPPSLSPPQNLIFRIAAYRAFSETSPFLQFVNFTANQTILE 353
Query: 355 TTEKATKVHIIDFGISYGFQWPCFIQR---QSFRPGGPPKIRITGIELPEPGFRPAERVE 411
+ E ++HI+DF I YG QW IQ + R P ++IT P E +
Sbjct: 354 SFEGFDRIHIVDFDIGYGGQWASLIQELAGKRNRSSSAPSLKITAFASPSTVSDEFE-LR 412
Query: 412 ETGHRLKKAAERCNVPFEYSAIAQKWETIKLDD----LKIDRDEVTVVTCMYRLNYLPDD 467
T L+ A V FE + + I L+ L + R + N LP
Sbjct: 413 FTEENLRSFAGETGVSFEIELLNME---ILLNPTYWPLSLFRSSEKEAIAV---N-LPIS 465
Query: 468 TQVKDSLRDAVLRLIKRINPDLFVHGVANGTYNSPF-FVSRFKEAMFHFSALFDMLEATV 526
+ V L +LR +K+I+P++ V + N+ F + A+ ++++L + L++
Sbjct: 466 SMVSGYL-PLILRFLKQISPNVVVCSDRSCDRNNDAPFPNGVINALQYYTSLLESLDSGN 524
Query: 527 PTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPVDQELLR 586
+ ER +L R E W+S + GF + + Q
Sbjct: 525 LNNAEAATSIERFCVQPSIQKLLT----NRYRWMERSPPWRSLFGQCGFTPVTLSQTAET 580
Query: 587 RVKKMVKMDYHKDFDVDE---NGQWMLQGWKGKILYALSFWK 625
+ + +++ + + F +++ + ++ W+ K L +S WK
Sbjct: 581 QAEYLLQRNPMRGFHLEKRQSSSPSLVLCWQRKELVTVSAWK 622
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 136 (52.9 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 81/379 (21%), Positives = 156/379 (41%)
Query: 258 LTQCAQAAASNDQRVAIELSKQIRQH-SSPDGDGTQRLAHYFANGLEARLSGT-RTPYFS 315
L + S++ +A + Q+ Q + G QR A YF L + L+GT R FS
Sbjct: 103 LIRVVDCIESDELHLAHVVLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRNQLFS 162
Query: 316 PAFISKTSVADVLKAYIVYISASPFRKASNFLTNRMI--GKTTEKATK-VHIIDFGISYG 372
+ + ++A + SP S+F N+ I +++ ++ VH++DF I +G
Sbjct: 163 -----WSDIVQKIRAIKEFSGISPIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFG 217
Query: 373 FQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432
Q+ ++ + + +R+T + + E V+E L + A + F+
Sbjct: 218 GQYASLMREIAEKSANGGFLRVTAV-VAEDCAVETRLVKEN---LTQFAAEMKIRFQIEF 273
Query: 433 IAQK-WETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFV 491
+ K +E + ++ E TVV P + + + V L R++P++ V
Sbjct: 274 VLMKTFEILSFKAIRFVDGERTVVLIS------PAIFRRVIGIAEFVNNL-GRVSPNVVV 326
Query: 492 HGVANG---TYNSPFFVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNV 548
+ G T S F F A ++ + + L+A P D + I E + R ++
Sbjct: 327 FVDSEGCTETAGSGSFRREFVSAFEFYTMVLESLDAAAPPGDLVKKIVETFLL-RPKISA 385
Query: 549 LACEGLERIDNPETYRQ--WQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENG 606
+E N + Q W+ AG R + + Q + + +++ + F V +
Sbjct: 386 ----AVETAANRRSAGQMTWREMLCAAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQ 441
Query: 607 QWMLQGWKGKILYALSFWK 625
++ W G+ L A S W+
Sbjct: 442 GELVLCWHGRALVATSAWR 460
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 554 LERIDNPETYRQWQSRNLRAGFRQLPVDQELLRRVKKMVKMDYHKDFDVDENGQWMLQGW 613
+ER++ E +W+ R AGF Q P+ + +K +++ Y + + + E ML GW
Sbjct: 1 MERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRC-YSEHYTLVEKDGAMLLGW 59
Query: 614 KGKILYALSFW 624
K + L + S W
Sbjct: 60 KKRNLISASAW 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 632 592 0.00084 120 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 618 (66 KB)
Total size of DFA: 351 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 47.45u 0.13s 47.58t Elapsed: 00:00:02
Total cpu time: 47.46u 0.13s 47.59t Elapsed: 00:00:02
Start: Fri May 10 09:45:19 2013 End: Fri May 10 09:45:21 2013