Query 039114
Match_columns 632
No_of_seqs 257 out of 707
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 10:30:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 97.2 0.002 6.8E-08 64.9 11.7 107 361-495 71-179 (261)
2 2aot_A HMT, histamine N-methyl 96.3 0.064 2.2E-06 53.8 14.7 153 323-492 11-169 (292)
3 3dtn_A Putative methyltransfer 96.2 0.013 4.5E-07 56.1 8.9 177 350-580 33-211 (234)
4 1vl5_A Unknown conserved prote 95.6 0.23 7.9E-06 48.4 14.7 107 352-492 29-137 (260)
5 3dh0_A SAM dependent methyltra 95.5 0.36 1.2E-05 45.4 15.1 112 350-492 27-140 (219)
6 3dlc_A Putative S-adenosyl-L-m 95.3 0.11 3.7E-06 48.5 10.7 109 350-492 34-145 (219)
7 3bkx_A SAM-dependent methyltra 94.9 0.87 3E-05 44.4 16.5 126 351-498 34-163 (275)
8 4a6d_A Hydroxyindole O-methylt 94.8 0.13 4.3E-06 53.7 10.7 161 348-580 167-331 (353)
9 3mgg_A Methyltransferase; NYSG 94.5 0.69 2.4E-05 45.3 14.7 101 360-492 37-139 (276)
10 3htx_A HEN1; HEN1, small RNA m 94.4 0.16 5.6E-06 59.6 11.2 124 353-500 714-840 (950)
11 3dp7_A SAM-dependent methyltra 93.9 0.33 1.1E-05 50.5 11.4 110 352-491 171-283 (363)
12 1xxl_A YCGJ protein; structura 93.9 1.7 5.9E-05 41.8 15.8 110 351-493 12-122 (239)
13 3ujc_A Phosphoethanolamine N-m 93.8 0.65 2.2E-05 44.7 12.6 120 340-491 35-155 (266)
14 3f4k_A Putative methyltransfer 92.7 2.6 9E-05 40.4 15.1 110 349-492 34-147 (257)
15 3gwz_A MMCR; methyltransferase 92.2 0.67 2.3E-05 48.2 10.8 109 350-491 192-303 (369)
16 3h2b_A SAM-dependent methyltra 92.1 0.9 3.1E-05 42.2 10.6 96 361-492 42-138 (203)
17 4fsd_A Arsenic methyltransfera 92.1 2 6.7E-05 45.0 14.3 115 360-496 83-205 (383)
18 2r3s_A Uncharacterized protein 92.1 2.6 8.8E-05 42.4 14.7 114 350-495 153-272 (335)
19 3mcz_A O-methyltransferase; ad 92.1 1.7 5.9E-05 44.3 13.6 111 351-491 169-283 (352)
20 1xtp_A LMAJ004091AAA; SGPP, st 91.9 0.34 1.2E-05 46.5 7.5 113 350-494 83-196 (254)
21 2ip2_A Probable phenazine-spec 91.7 1.4 4.6E-05 44.7 12.2 110 350-491 158-268 (334)
22 3l8d_A Methyltransferase; stru 91.1 3.2 0.00011 39.3 13.4 98 361-493 54-151 (242)
23 3jwg_A HEN1, methyltransferase 90.4 1.3 4.5E-05 41.7 9.9 119 352-500 21-146 (219)
24 1x19_A CRTF-related protein; m 90.2 2.2 7.5E-05 43.9 12.1 114 348-494 178-295 (359)
25 3e23_A Uncharacterized protein 89.6 2.1 7.3E-05 39.9 10.5 95 361-493 44-139 (211)
26 1qzz_A RDMB, aclacinomycin-10- 89.5 1.8 6.1E-05 44.5 10.8 113 350-495 172-288 (374)
27 3hnr_A Probable methyltransfer 89.2 1.4 4.8E-05 41.3 9.1 107 350-492 35-142 (220)
28 3i53_A O-methyltransferase; CO 88.7 1.9 6.5E-05 43.8 10.2 108 351-491 160-270 (332)
29 3vc1_A Geranyl diphosphate 2-C 88.6 5.4 0.00018 40.0 13.4 109 350-492 106-218 (312)
30 1tw3_A COMT, carminomycin 4-O- 88.1 3.3 0.00011 42.3 11.7 113 350-495 173-289 (360)
31 2fk8_A Methoxy mycolic acid sy 87.8 14 0.00049 36.7 16.0 107 351-491 81-190 (318)
32 3g5l_A Putative S-adenosylmeth 87.7 6.2 0.00021 37.8 12.7 111 348-493 32-143 (253)
33 1kpg_A CFA synthase;, cyclopro 87.3 4.3 0.00015 39.8 11.5 107 351-491 55-164 (287)
34 3ccf_A Cyclopropane-fatty-acyl 87.0 4 0.00014 40.1 11.1 105 352-495 49-154 (279)
35 3kkz_A Uncharacterized protein 86.5 10 0.00034 36.8 13.6 109 350-492 35-147 (267)
36 3jwh_A HEN1; methyltransferase 85.7 4.5 0.00015 37.9 10.3 115 352-496 21-142 (217)
37 2o57_A Putative sarcosine dime 85.0 8.7 0.0003 37.8 12.4 100 359-491 81-183 (297)
38 3bus_A REBM, methyltransferase 84.0 11 0.00038 36.3 12.5 108 351-491 52-162 (273)
39 2qe6_A Uncharacterized protein 83.6 26 0.00091 34.8 15.4 109 362-496 79-198 (274)
40 3ocj_A Putative exported prote 83.6 18 0.00062 35.9 14.3 105 360-493 118-225 (305)
41 3lcv_B Sisomicin-gentamicin re 83.5 8.9 0.0003 39.5 11.8 130 351-521 125-257 (281)
42 3lcc_A Putative methyl chlorid 83.2 26 0.00088 33.1 14.5 101 362-493 68-169 (235)
43 2xvm_A Tellurite resistance pr 83.1 13 0.00045 33.7 12.0 109 350-491 22-132 (199)
44 1nkv_A Hypothetical protein YJ 82.8 10 0.00035 36.2 11.6 108 351-492 27-137 (256)
45 3p9c_A Caffeic acid O-methyltr 82.4 3.4 0.00012 42.9 8.6 103 350-491 190-294 (364)
46 2yqz_A Hypothetical protein TT 82.2 20 0.00069 34.0 13.4 102 359-494 38-140 (263)
47 3reo_A (ISO)eugenol O-methyltr 81.1 6.6 0.00023 40.8 10.2 45 349-400 191-236 (368)
48 1fp1_D Isoliquiritigenin 2'-O- 81.0 7.4 0.00025 40.2 10.5 103 350-491 198-302 (372)
49 3gu3_A Methyltransferase; alph 80.7 45 0.0015 32.7 16.8 103 359-492 21-123 (284)
50 3m70_A Tellurite resistance pr 80.5 11 0.00037 36.9 11.1 109 351-492 111-220 (286)
51 3i9f_A Putative type 11 methyl 80.2 16 0.00054 32.5 11.2 100 352-492 9-109 (170)
52 3lst_A CALO1 methyltransferase 79.8 9 0.00031 39.2 10.6 44 350-400 174-217 (348)
53 3hem_A Cyclopropane-fatty-acyl 79.7 16 0.00054 36.2 12.1 113 351-491 63-179 (302)
54 3dli_A Methyltransferase; PSI- 79.6 3.6 0.00012 39.3 7.1 93 361-490 42-135 (240)
55 4e2x_A TCAB9; kijanose, tetron 79.4 4.2 0.00014 42.6 8.0 108 351-493 98-206 (416)
56 3g5t_A Trans-aconitate 3-methy 79.3 8 0.00027 38.3 9.7 110 359-492 35-146 (299)
57 4htf_A S-adenosylmethionine-de 79.1 12 0.00042 36.6 10.9 100 361-493 69-171 (285)
58 3sm3_A SAM-dependent methyltra 79.1 28 0.00095 32.3 13.0 101 361-492 31-138 (235)
59 3ofk_A Nodulation protein S; N 78.9 14 0.00046 34.4 10.7 108 352-492 43-151 (216)
60 2zfu_A Nucleomethylin, cerebra 78.5 7.7 0.00026 36.1 8.9 29 360-400 67-95 (215)
61 3thr_A Glycine N-methyltransfe 77.1 4 0.00014 40.1 6.7 122 351-492 48-172 (293)
62 3u81_A Catechol O-methyltransf 76.7 5.8 0.0002 37.6 7.5 33 361-399 59-91 (221)
63 1vlm_A SAM-dependent methyltra 75.9 45 0.0015 31.1 13.5 22 560-581 165-186 (219)
64 2p7i_A Hypothetical protein; p 75.2 9.5 0.00032 35.7 8.5 93 362-492 44-138 (250)
65 3uwp_A Histone-lysine N-methyl 74.9 4.8 0.00016 43.9 7.0 119 350-492 163-285 (438)
66 2yxd_A Probable cobalt-precorr 73.9 9.8 0.00034 33.9 7.9 100 353-492 28-128 (183)
67 3bkw_A MLL3908 protein, S-aden 72.6 30 0.001 32.4 11.4 108 350-492 33-141 (243)
68 3mq2_A 16S rRNA methyltransfer 72.4 2.9 0.0001 39.3 4.1 65 354-431 21-86 (218)
69 3r0q_C Probable protein argini 71.7 21 0.00072 37.2 10.9 111 350-492 53-166 (376)
70 3giw_A Protein of unknown func 71.6 10 0.00035 38.8 8.2 147 329-495 43-201 (277)
71 2p35_A Trans-aconitate 2-methy 70.8 14 0.00047 35.2 8.6 106 351-493 24-130 (259)
72 2vdw_A Vaccinia virus capping 70.8 41 0.0014 34.0 12.5 108 361-492 49-166 (302)
73 3fzg_A 16S rRNA methylase; met 70.5 4.6 0.00016 39.7 5.1 102 362-495 51-152 (200)
74 3bgv_A MRNA CAP guanine-N7 met 70.5 27 0.00092 34.8 11.0 112 360-492 34-152 (313)
75 3ou2_A SAM-dependent methyltra 70.3 22 0.00076 32.6 9.7 107 349-492 34-143 (218)
76 1ve3_A Hypothetical protein PH 70.0 32 0.0011 31.8 10.8 100 361-492 39-139 (227)
77 3cgg_A SAM-dependent methyltra 69.2 24 0.00082 31.5 9.4 31 360-399 46-76 (195)
78 3e8s_A Putative SAM dependent 69.1 34 0.0012 31.4 10.7 44 348-400 40-83 (227)
79 3d2l_A SAM-dependent methyltra 68.4 62 0.0021 30.1 12.6 125 330-494 10-136 (243)
80 1y8c_A S-adenosylmethionine-de 68.1 24 0.00081 33.0 9.5 102 360-493 37-140 (246)
81 3ege_A Putative methyltransfer 68.0 24 0.00081 34.2 9.7 109 351-499 25-135 (261)
82 2y1w_A Histone-arginine methyl 66.4 20 0.00067 36.9 9.2 111 350-492 40-152 (348)
83 1dus_A MJ0882; hypothetical pr 65.1 36 0.0012 30.3 9.7 113 349-495 41-157 (194)
84 3cc8_A Putative methyltransfer 64.7 18 0.00061 33.4 7.8 105 349-492 22-127 (230)
85 2p8j_A S-adenosylmethionine-de 63.6 41 0.0014 30.7 10.0 101 361-492 24-125 (209)
86 3pfg_A N-methyltransferase; N, 63.0 47 0.0016 31.8 10.7 130 326-494 17-150 (263)
87 1fp2_A Isoflavone O-methyltran 62.7 25 0.00084 35.9 9.1 33 360-399 188-220 (352)
88 4dcm_A Ribosomal RNA large sub 61.6 26 0.0009 36.7 9.2 125 348-496 210-335 (375)
89 3q7e_A Protein arginine N-meth 61.0 42 0.0014 34.5 10.5 101 361-492 67-170 (349)
90 1wzn_A SAM-dependent methyltra 60.8 74 0.0025 30.0 11.6 109 353-494 34-144 (252)
91 3iv6_A Putative Zn-dependent a 60.2 13 0.00043 37.5 6.2 41 350-399 35-75 (261)
92 3hm2_A Precorrin-6Y C5,15-meth 57.8 62 0.0021 28.5 9.9 59 352-427 17-75 (178)
93 2ex4_A Adrenal gland protein A 56.7 46 0.0016 31.5 9.3 103 360-492 79-182 (241)
94 3eey_A Putative rRNA methylase 56.6 54 0.0018 29.8 9.5 109 362-492 24-136 (197)
95 3g2m_A PCZA361.24; SAM-depende 55.8 20 0.00068 35.4 6.8 111 352-492 75-187 (299)
96 2gs9_A Hypothetical protein TT 55.7 57 0.002 29.9 9.6 97 360-496 36-134 (211)
97 1wy7_A Hypothetical protein PH 55.0 1.2E+02 0.004 27.7 11.6 98 361-492 50-147 (207)
98 4hg2_A Methyltransferase type 54.6 1E+02 0.0035 30.3 11.7 94 363-496 42-136 (257)
99 2fyt_A Protein arginine N-meth 54.2 38 0.0013 34.7 8.8 111 350-492 54-168 (340)
100 1zg3_A Isoflavanone 4'-O-methy 53.9 29 0.00098 35.5 7.8 43 351-400 182-226 (358)
101 2avn_A Ubiquinone/menaquinone 52.9 66 0.0023 30.9 9.8 31 360-399 54-84 (260)
102 3mti_A RRNA methylase; SAM-dep 52.8 67 0.0023 28.8 9.4 43 362-419 24-66 (185)
103 4azs_A Methyltransferase WBDD; 52.7 11 0.00038 41.7 4.7 113 360-499 66-179 (569)
104 3p9n_A Possible methyltransfer 52.7 55 0.0019 29.7 8.8 106 362-497 46-155 (189)
105 3frh_A 16S rRNA methylase; met 50.2 21 0.00072 36.2 5.8 100 362-495 107-206 (253)
106 1g6q_1 HnRNP arginine N-methyl 50.0 71 0.0024 32.4 9.9 101 361-492 39-142 (328)
107 3b3j_A Histone-arginine methyl 47.4 28 0.00097 37.8 6.8 111 350-492 148-260 (480)
108 3g07_A 7SK snRNA methylphospha 47.1 14 0.00048 36.8 4.0 48 360-420 46-93 (292)
109 2g72_A Phenylethanolamine N-me 46.6 42 0.0014 32.8 7.4 44 360-417 71-114 (289)
110 3e05_A Precorrin-6Y C5,15-meth 46.2 62 0.0021 29.7 8.1 54 352-418 32-85 (204)
111 3p2e_A 16S rRNA methylase; met 45.5 22 0.00077 34.2 5.1 112 360-493 24-137 (225)
112 3lbf_A Protein-L-isoaspartate 44.2 1.3E+02 0.0044 27.5 10.0 104 352-494 69-173 (210)
113 1nv8_A HEMK protein; class I a 43.2 98 0.0034 30.8 9.6 111 362-496 125-250 (284)
114 3q87_B N6 adenine specific DNA 42.8 1.3E+02 0.0043 27.1 9.5 28 363-400 26-53 (170)
115 1ri5_A MRNA capping enzyme; me 42.6 1.5E+02 0.005 28.5 10.5 106 361-492 65-171 (298)
116 2kl8_A OR15; structural genomi 42.2 35 0.0012 27.9 4.8 37 388-432 40-76 (85)
117 2fca_A TRNA (guanine-N(7)-)-me 41.8 1.6E+02 0.0056 27.4 10.5 53 361-430 39-92 (213)
118 3ftd_A Dimethyladenosine trans 40.8 58 0.002 32.0 7.3 41 351-399 22-62 (249)
119 3njr_A Precorrin-6Y methylase; 40.8 1.4E+02 0.0049 27.7 9.8 61 352-431 47-109 (204)
120 3fut_A Dimethyladenosine trans 38.8 50 0.0017 33.2 6.6 100 336-461 18-122 (271)
121 3g89_A Ribosomal RNA small sub 38.2 56 0.0019 31.9 6.7 100 360-492 80-181 (249)
122 1pjz_A Thiopurine S-methyltran 38.1 70 0.0024 29.7 7.2 103 360-490 22-135 (203)
123 2j66_A BTRK, decarboxylase; bu 36.7 1.3E+02 0.0043 31.6 9.7 68 360-431 133-223 (428)
124 4hc4_A Protein arginine N-meth 36.2 81 0.0028 33.3 8.0 100 363-492 86-186 (376)
125 2fpo_A Methylase YHHF; structu 35.8 63 0.0021 30.1 6.4 102 362-496 56-161 (202)
126 2gb4_A Thiopurine S-methyltran 35.8 2E+02 0.0069 28.0 10.4 105 360-491 68-187 (252)
127 3m33_A Uncharacterized protein 35.7 99 0.0034 29.0 7.8 30 361-399 49-78 (226)
128 2h1r_A Dimethyladenosine trans 34.8 1.1E+02 0.0036 30.8 8.3 41 350-399 32-72 (299)
129 2kw5_A SLR1183 protein; struct 34.0 2.6E+02 0.0089 25.1 12.8 50 363-431 32-81 (202)
130 1zq9_A Probable dimethyladenos 33.9 1.4E+02 0.0047 29.7 8.9 40 351-399 19-58 (285)
131 3tfw_A Putative O-methyltransf 33.7 96 0.0033 29.8 7.6 54 362-431 65-120 (248)
132 2pjd_A Ribosomal RNA small sub 33.5 57 0.002 33.2 6.1 119 349-496 185-304 (343)
133 3ggd_A SAM-dependent methyltra 33.4 43 0.0015 31.6 4.9 104 362-495 58-164 (245)
134 1uwv_A 23S rRNA (uracil-5-)-me 33.1 1.9E+02 0.0066 30.5 10.4 99 361-493 287-387 (433)
135 3grz_A L11 mtase, ribosomal pr 32.9 1.1E+02 0.0037 28.0 7.4 44 348-399 46-91 (205)
136 1xj5_A Spermidine synthase 1; 32.3 1.4E+02 0.0048 30.7 8.9 113 362-496 122-236 (334)
137 1yzh_A TRNA (guanine-N(7)-)-me 31.3 1.8E+02 0.006 26.9 8.7 44 361-417 42-85 (214)
138 4hhu_A OR280; engineered prote 31.2 59 0.002 29.5 5.0 42 389-438 123-164 (170)
139 1dl5_A Protein-L-isoaspartate 30.1 2.9E+02 0.0098 27.5 10.7 66 350-431 65-131 (317)
140 3lpm_A Putative methyltransfer 29.3 3.2E+02 0.011 26.1 10.5 114 360-494 49-175 (259)
141 1jsx_A Glucose-inhibited divis 29.1 97 0.0033 28.2 6.4 53 362-431 67-120 (207)
142 2gpy_A O-methyltransferase; st 28.7 1.3E+02 0.0046 28.1 7.5 31 362-399 56-86 (233)
143 3gru_A Dimethyladenosine trans 28.2 1.3E+02 0.0046 30.5 7.8 99 338-461 23-126 (295)
144 1xdz_A Methyltransferase GIDB; 27.7 1.5E+02 0.0053 28.0 7.8 99 361-493 71-172 (240)
145 3bwc_A Spermidine synthase; SA 27.3 2.8E+02 0.0095 27.7 9.9 111 362-494 97-209 (304)
146 2yxe_A Protein-L-isoaspartate 27.0 97 0.0033 28.4 6.0 56 351-418 68-123 (215)
147 2ift_A Putative methylase HI07 27.0 1.9E+02 0.0065 26.6 8.1 103 362-496 55-164 (201)
148 2ph5_A Homospermidine synthase 26.7 21 0.00072 39.3 1.5 78 343-429 90-183 (480)
149 4dzr_A Protein-(glutamine-N5) 26.5 48 0.0016 30.1 3.7 35 359-400 29-63 (215)
150 2jjq_A Uncharacterized RNA met 26.3 3.9E+02 0.013 28.3 11.3 94 362-493 292-385 (425)
151 2o07_A Spermidine synthase; st 25.9 4.2E+02 0.014 26.5 11.0 111 362-495 97-209 (304)
152 1o9g_A RRNA methyltransferase; 25.5 1.1E+02 0.0036 29.3 6.2 55 353-418 44-98 (250)
153 3tqs_A Ribosomal RNA small sub 24.4 1.2E+02 0.0041 30.0 6.4 40 351-399 20-59 (255)
154 3dxy_A TRNA (guanine-N(7)-)-me 24.1 1.6E+02 0.0054 28.0 7.0 54 360-430 34-88 (218)
155 3orh_A Guanidinoacetate N-meth 24.0 98 0.0034 29.6 5.6 103 360-491 60-166 (236)
156 2esr_A Methyltransferase; stru 23.9 2.2E+02 0.0076 25.0 7.7 104 362-498 33-141 (177)
157 3bxo_A N,N-dimethyltransferase 23.3 4.3E+02 0.015 24.1 11.6 98 360-493 40-139 (239)
158 1l3i_A Precorrin-6Y methyltran 23.2 1.3E+02 0.0046 26.3 6.0 44 359-417 32-75 (192)
159 3dr5_A Putative O-methyltransf 22.9 1.4E+02 0.0049 28.3 6.5 55 357-427 53-107 (221)
160 2vdv_E TRNA (guanine-N(7)-)-me 22.3 4.1E+02 0.014 25.0 9.7 48 360-420 49-96 (246)
161 1zx0_A Guanidinoacetate N-meth 20.9 2.9E+02 0.0098 25.8 8.2 32 360-399 60-91 (236)
162 2pxx_A Uncharacterized protein 20.7 3E+02 0.01 24.6 8.0 44 360-417 42-85 (215)
163 3bzb_A Uncharacterized protein 20.6 5.7E+02 0.02 24.8 10.6 30 362-399 81-110 (281)
164 2qn6_B Translation initiation 20.5 58 0.002 28.0 2.8 42 388-431 50-91 (93)
165 3uzu_A Ribosomal RNA small sub 20.4 1.5E+02 0.005 29.8 6.2 44 351-399 33-76 (279)
166 2qm3_A Predicted methyltransfe 20.2 4.8E+02 0.016 26.7 10.3 95 362-489 174-271 (373)
167 3ckk_A TRNA (guanine-N(7)-)-me 20.2 1.4E+02 0.0046 28.8 5.7 49 359-420 45-93 (235)
168 1iy9_A Spermidine synthase; ro 20.1 5.3E+02 0.018 25.2 10.2 134 361-521 76-212 (275)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=97.20 E-value=0.002 Score=64.92 Aligned_cols=107 Identities=19% Similarity=0.262 Sum_probs=63.5
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|.|.|. +...|+.+- ++|..+|||||.. .+.|+.+.+++.++. ...+++|.. ...+++
T Consensus 71 ~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s------~~ml~~A~~~~~~~~--~~~~v~~~~--~D~~~~ 135 (261)
T 4gek_A 71 GTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNS------PAMIERCRRHIDAYK--APTPVDVIE--GDIRDI 135 (261)
T ss_dssp TCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESC------HHHHHHHHHHHHTSC--CSSCEEEEE--SCTTTC
T ss_pred CCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECC------HHHHHHHHHHHHhhc--cCceEEEee--cccccc
Confidence 3579999999993 445566442 4467899999973 355777766665432 223445432 233333
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCE-EEEEee
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDL-FVHGVA 495 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~V-fv~~e~ 495 (632)
...+ .=+|-|.+.|||+.++ -|..+|+.| |.|+|.- |++.+.
T Consensus 136 -----~~~~--~d~v~~~~~l~~~~~~------~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 136 -----AIEN--ASMVVLNFTLQFLEPS------ERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp -----CCCS--EEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -----cccc--cccceeeeeeeecCch------hHhHHHHHHHHHcCCCcEEEEEec
Confidence 2222 2234455678888642 256788877 5589986 445544
No 2
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.31 E-value=0.064 Score=53.80 Aligned_cols=153 Identities=13% Similarity=0.138 Sum_probs=78.4
Q ss_pred ChHHHHHHHHHHHhcCcchhhhHHHhhH---HHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeec
Q 039114 323 SVADVLKAYIVYISASPFRKASNFLTNR---MIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIE 398 (632)
Q Consensus 323 s~~~~lkAy~~f~~~~Pf~kfa~f~ANq---aILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~ 398 (632)
......+.|+.|...+.-.+...-.-.+ .|++.+. .....+|+|+|-|-|.---.++..|+.+..+ -.+.+||||
T Consensus 11 d~~~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~-~~v~~~~vD 89 (292)
T 2aot_A 11 DHGKYVESFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYPG-VCINNEVVE 89 (292)
T ss_dssp CHHHHHHHHHHHHTTBSHHHHHHHHHHHTHHHHSSSTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHSTT-CEEEEEEEC
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHhchhHHhhccCCCCCCeEEEEcCCCCHHHHHHHHHHHhhCCC-ceeeEEEEe
Confidence 3445667777776664422222211121 2222222 2456899999999995433467777654211 123459998
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccCccc-ccCCCCceEEEEeecccCCCCCCcccccchHHH
Q 039114 399 LPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDD-LKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDA 477 (632)
Q Consensus 399 ~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~e~-L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~ 477 (632)
+. .+.++...+++.+...--+|.|+|... ..+++...- .....+.+=+|-|.+.|||+.| | ..
T Consensus 90 ~S------~~ml~~a~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d-------~-~~ 153 (292)
T 2aot_A 90 PS------AEQIAKYKELVAKTSNLENVKFAWHKE--TSSEYQSRMLEKKELQKWDFIHMIQMLYYVKD-------I-PA 153 (292)
T ss_dssp SC------HHHHHHHHHHHHTCSSCTTEEEEEECS--CHHHHHHHHHTTTCCCCEEEEEEESCGGGCSC-------H-HH
T ss_pred CC------HHHHHHHHHHHHhccCCCcceEEEEec--chhhhhhhhccccCCCceeEEEEeeeeeecCC-------H-HH
Confidence 63 345555555443211101344554432 222221000 0012344556778889999976 2 45
Q ss_pred HHHHHH-hhCCCEEEE
Q 039114 478 VLRLIK-RINPDLFVH 492 (632)
Q Consensus 478 vL~~Ir-~L~P~Vfv~ 492 (632)
+|+.|+ -|+|.-.++
T Consensus 154 ~l~~~~r~LkpgG~l~ 169 (292)
T 2aot_A 154 TLKFFHSLLGTNAKML 169 (292)
T ss_dssp HHHHHHHTEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEE
Confidence 666664 569996443
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=96.24 E-value=0.013 Score=56.13 Aligned_cols=177 Identities=11% Similarity=0.152 Sum_probs=89.6
Q ss_pred HHHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcE
Q 039114 350 RMIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPF 428 (632)
Q Consensus 350 qaILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpF 428 (632)
+.+++.+. ..+..+|+|+|.+.|. +...|+.+- |..++||||.. ...++.+.+++ ...+ ..
T Consensus 33 ~~~~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s------~~~~~~a~~~~----~~~~-~~ 94 (234)
T 3dtn_A 33 GVSVSIASVDTENPDILDLGAGTGL----LSAFLMEKY---PEATFTLVDMS------EKMLEIAKNRF----RGNL-KV 94 (234)
T ss_dssp HHHHHTCCCSCSSCEEEEETCTTSH----HHHHHHHHC---TTCEEEEEESC------HHHHHHHHHHT----CSCT-TE
T ss_pred HHHHHHhhcCCCCCeEEEecCCCCH----HHHHHHHhC---CCCeEEEEECC------HHHHHHHHHhh----ccCC-CE
Confidence 55666665 4456899999999994 333344332 45799999963 23444444333 2222 34
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeecCCCCCCchHHH
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVANGTYNSPFFVSR 507 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F~~R 507 (632)
+|.. ..++++. .. +.+=+|-|...|+|+.+. .+..+|+.+ +-|+|.-.++.......+.+.+...
T Consensus 95 ~~~~--~d~~~~~-----~~-~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 160 (234)
T 3dtn_A 95 KYIE--ADYSKYD-----FE-EKYDMVVSALSIHHLEDE------DKKELYKRSYSILKESGIFINADLVHGETAFIENL 160 (234)
T ss_dssp EEEE--SCTTTCC-----CC-SCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHH
T ss_pred EEEe--CchhccC-----CC-CCceEEEEeCccccCCHH------HHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhH
Confidence 4432 2233222 11 344455566788888542 233567666 5589986554332222223322222
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhHhHhhhhhccCCCccCCccchhhHHHHHHhCCCccccC
Q 039114 508 FKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPV 580 (632)
Q Consensus 508 F~EAL~yYsAlFDsLda~~pr~~~eR~~iEr~~~greI~NvVAcEG~eRvER~E~~~qWq~R~~rAGF~~lpL 580 (632)
+...+. ..+. +..++ . .++.+..... ...++-+...|...++.|||+.+.+
T Consensus 161 ~~~~~~---~~~~--~~~~~---~-----------~~~~~~~~~~---~~~~~~~~~~~~~ll~~aGF~~v~~ 211 (234)
T 3dtn_A 161 NKTIWR---QYVE--NSGLT---E-----------EEIAAGYERS---KLDKDIEMNQQLNWLKEAGFRDVSC 211 (234)
T ss_dssp HHHHHH---HHHH--TSSCC---H-----------HHHHTTC-------CCCCCBHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHH---HHHH--hcCCC---H-----------HHHHHHHHhc---ccccccCHHHHHHHHHHcCCCceee
Confidence 222111 1111 11111 1 1111111111 3456677889999999999986543
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=95.59 E-value=0.23 Score=48.36 Aligned_cols=107 Identities=10% Similarity=0.149 Sum_probs=61.7
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEY 430 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF 430 (632)
|++.+.-...-+|+|+|-+.|. +...|+.+- + ++||||.. .+.++.+.+++ +..|++ ++|
T Consensus 29 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~gvD~s------~~~l~~a~~~~----~~~~~~~v~~ 89 (260)
T 1vl5_A 29 LMQIAALKGNEEVLDVATGGGH----VANAFAPFV--K---KVVAFDLT------EDILKVARAFI----EGNGHQQVEY 89 (260)
T ss_dssp HHHHHTCCSCCEEEEETCTTCH----HHHHHGGGS--S---EEEEEESC------HHHHHHHHHHH----HHTTCCSEEE
T ss_pred HHHHhCCCCCCEEEEEeCCCCH----HHHHHHHhC--C---EEEEEeCC------HHHHHHHHHHH----HhcCCCceEE
Confidence 3444443455689999999884 555666552 2 99999963 34455544443 344554 444
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEE
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVH 492 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~ 492 (632)
.. ...++ +....+.+=+|-|.+.|||+.| |. .+|+. .|-|+|.-.++
T Consensus 90 ~~--~d~~~-----l~~~~~~fD~V~~~~~l~~~~d-------~~-~~l~~~~r~LkpgG~l~ 137 (260)
T 1vl5_A 90 VQ--GDAEQ-----MPFTDERFHIVTCRIAAHHFPN-------PA-SFVSEAYRVLKKGGQLL 137 (260)
T ss_dssp EE--CCC-C-----CCSCTTCEEEEEEESCGGGCSC-------HH-HHHHHHHHHEEEEEEEE
T ss_pred EE--ecHHh-----CCCCCCCEEEEEEhhhhHhcCC-------HH-HHHHHHHHHcCCCCEEE
Confidence 33 22332 2233344545667788899865 33 45554 46789986544
No 5
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=95.46 E-value=0.36 Score=45.40 Aligned_cols=112 Identities=15% Similarity=0.204 Sum_probs=63.9
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-E
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-F 428 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-F 428 (632)
..|++.+.-...-.|+|+|.+.|.--..|.+.. +|..++||||.. ...++.+.+++.. .+++ +
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------~~~~~v~~vD~s------~~~~~~a~~~~~~----~~~~~~ 90 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMV------GEKGKVYAIDVQ------EEMVNYAWEKVNK----LGLKNV 90 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHH------TTTCEEEEEESC------HHHHHHHHHHHHH----HTCTTE
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHh------CCCcEEEEEECC------HHHHHHHHHHHHH----cCCCcE
Confidence 455565554455689999999996433333332 355699999963 3445555555433 3554 4
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVH 492 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~ 492 (632)
+|.. ..++++ ....+.+=+|-|...|+|+.+ + ..+|+. .+.|+|.-.++
T Consensus 91 ~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~ 140 (219)
T 3dh0_A 91 EVLK--SEENKI-----PLPDNTVDFIFMAFTFHELSE-------P-LKFLEELKRVAKPFAYLA 140 (219)
T ss_dssp EEEE--CBTTBC-----SSCSSCEEEEEEESCGGGCSS-------H-HHHHHHHHHHEEEEEEEE
T ss_pred EEEe--cccccC-----CCCCCCeeEEEeehhhhhcCC-------H-HHHHHHHHHHhCCCeEEE
Confidence 4433 223322 223343445556677788753 3 345555 46689986544
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=95.28 E-value=0.11 Score=48.46 Aligned_cols=109 Identities=11% Similarity=0.115 Sum_probs=63.7
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
..|++.+..... +|+|+|.+.|. +...|+.+ |..++||||.. ...++.+.+++ +..++.
T Consensus 34 ~~~~~~~~~~~~-~vLdiG~G~G~----~~~~l~~~----~~~~v~~~D~s------~~~~~~a~~~~----~~~~~~~~ 94 (219)
T 3dlc_A 34 ENIINRFGITAG-TCIDIGSGPGA----LSIALAKQ----SDFSIRALDFS------KHMNEIALKNI----ADANLNDR 94 (219)
T ss_dssp HHHHHHHCCCEE-EEEEETCTTSH----HHHHHHHH----SEEEEEEEESC------HHHHHHHHHHH----HHTTCTTT
T ss_pred HHHHHhcCCCCC-EEEEECCCCCH----HHHHHHHc----CCCeEEEEECC------HHHHHHHHHHH----HhccccCc
Confidence 555566554555 99999999994 44555554 45899999963 34455554444 344543
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
++|.. ..+++ +.+..+.+=+|-|...|+|+.+ + ..+|+.+ +.|+|.-.++
T Consensus 95 ~~~~~--~d~~~-----~~~~~~~~D~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~ 145 (219)
T 3dlc_A 95 IQIVQ--GDVHN-----IPIEDNYADLIVSRGSVFFWED-------V-ATAFREIYRILKSGGKTY 145 (219)
T ss_dssp EEEEE--CBTTB-----CSSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEE
T ss_pred eEEEE--cCHHH-----CCCCcccccEEEECchHhhccC-------H-HHHHHHHHHhCCCCCEEE
Confidence 44433 22332 2233344445556677888743 3 3455554 6689986554
No 7
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=94.90 E-value=0.87 Score=44.40 Aligned_cols=126 Identities=14% Similarity=0.115 Sum_probs=64.3
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-.+.-+|+|+|-+.|. +...|+.+- | |..++|||+.........+.++.+.+++. ..+++ .
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~-g-~~~~v~gvD~s~~~~~~~~~~~~a~~~~~----~~~~~~~v 103 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGD----LSAVLADQV-G-SSGHVTGIDIASPDYGAPLTLGQAWNHLL----AGPLGDRL 103 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSH----HHHHHHHHH-C-TTCEEEEECSSCTTCCSSSCHHHHHHHHH----TSTTGGGE
T ss_pred HHHHHcCCCCCCEEEEeCCCCCH----HHHHHHHHh-C-CCCEEEEEECCccccccHHHHHHHHHHHH----hcCCCCce
Confidence 45555543455689999999884 333344331 2 44699999974320000013555544443 33442 4
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCC-C-EEEEEeecCC
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINP-D-LFVHGVANGT 498 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P-~-Vfv~~e~n~~ 498 (632)
+|.... ++....+....+.+=+|-|...|+|+.+ | +.+++.++.+.| . .+++.+....
T Consensus 104 ~~~~~d----~~~~~~~~~~~~~fD~v~~~~~l~~~~~-------~-~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 104 TVHFNT----NLSDDLGPIADQHFDRVVLAHSLWYFAS-------A-NALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp EEECSC----CTTTCCGGGTTCCCSEEEEESCGGGSSC-------H-HHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEECC----hhhhccCCCCCCCEEEEEEccchhhCCC-------H-HHHHHHHHHHhCCCCEEEEEEecCC
Confidence 443321 1111222222222223335566778765 2 348899999887 3 4555555443
No 8
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=94.80 E-value=0.13 Score=53.68 Aligned_cols=161 Identities=17% Similarity=0.222 Sum_probs=87.0
Q ss_pred hhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 348 TNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 348 ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
..+.|+++..-...-+|+|+|-+.|. ++.+|+++. |.+|+|..+.| +.++.+.+++. .+ ..=.
T Consensus 167 ~~~~~~~~~~~~~~~~v~DvGgG~G~----~~~~l~~~~---p~~~~~~~dlp-------~v~~~a~~~~~-~~--~~~r 229 (353)
T 4a6d_A 167 NGRSVLTAFDLSVFPLMCDLGGGAGA----LAKECMSLY---PGCKITVFDIP-------EVVWTAKQHFS-FQ--EEEQ 229 (353)
T ss_dssp HHHHHHHSSCGGGCSEEEEETCTTSH----HHHHHHHHC---SSCEEEEEECH-------HHHHHHHHHSC-C----CCS
T ss_pred HHHHHHHhcCcccCCeEEeeCCCCCH----HHHHHHHhC---CCceeEeccCH-------HHHHHHHHhhh-hc--ccCc
Confidence 34677887764455589999999994 555666554 67999999875 23444433321 11 1112
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCE-EEEEee--cCCCCCCc
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDL-FVHGVA--NGTYNSPF 503 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~V-fv~~e~--n~~~nsp~ 503 (632)
.+|.+- ..-+ + .+.... +|-+..-||+..|+. ...+|+.| +.|+|.- +++.+. +.+...|.
T Consensus 230 v~~~~g--D~~~----~-~~~~~D--~~~~~~vlh~~~d~~------~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~ 294 (353)
T 4a6d_A 230 IDFQEG--DFFK----D-PLPEAD--LYILARVLHDWADGK------CSHLLERIYHTCKPGGGILVIESLLDEDRRGPL 294 (353)
T ss_dssp EEEEES--CTTT----S-CCCCCS--EEEEESSGGGSCHHH------HHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCH
T ss_pred eeeecC--cccc----C-CCCCce--EEEeeeecccCCHHH------HHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCH
Confidence 444332 1110 1 111223 333445678887753 23567776 5689975 333332 22233342
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhHhHhhhhhccCCCccCCccchhhHHHHHHhCCCccccC
Q 039114 504 FVSRFKEAMFHFSALFDMLEATVPTEDQGRLIYEREVFGRHAMNVLACEGLERIDNPETYRQWQSRNLRAGFRQLPV 580 (632)
Q Consensus 504 F~~RF~EAL~yYsAlFDsLda~~pr~~~eR~~iEr~~~greI~NvVAcEG~eRvER~E~~~qWq~R~~rAGF~~lpL 580 (632)
+ .++||.. + .+.+.|.+| |.++|+..+.+|||+.+.+
T Consensus 295 ~-----------~~~~dl~-----------------m-------l~~~~g~er-----t~~e~~~ll~~AGf~~v~v 331 (353)
T 4a6d_A 295 L-----------TQLYSLN-----------------M-------LVQTEGQER-----TPTHYHMLLSSAGFRDFQF 331 (353)
T ss_dssp H-----------HHHHHHH-----------------H-------HHSSSCCCC-----CHHHHHHHHHHHTCEEEEE
T ss_pred H-----------HHHHHHH-----------------H-------HHhCCCcCC-----CHHHHHHHHHHCCCceEEE
Confidence 2 1222210 0 122345555 4579999999999986643
No 9
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=94.53 E-value=0.69 Score=45.25 Aligned_cols=101 Identities=15% Similarity=0.265 Sum_probs=58.1
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEEeeccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYSAIAQKWE 438 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~~Ia~~~E 438 (632)
+.-+|+|+|-+.|. +...|+.+. |..++||||.. ...++.+.++ +...+++ .+|.. ..++
T Consensus 37 ~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~s------~~~~~~a~~~----~~~~~~~~~~~~~--~d~~ 97 (276)
T 3mgg_A 37 PGAKVLEAGCGIGA----QTVILAKNN---PDAEITSIDIS------PESLEKAREN----TEKNGIKNVKFLQ--ANIF 97 (276)
T ss_dssp TTCEEEETTCTTSH----HHHHHHHHC---TTSEEEEEESC------HHHHHHHHHH----HHHTTCCSEEEEE--CCGG
T ss_pred CCCeEEEecCCCCH----HHHHHHHhC---CCCEEEEEECC------HHHHHHHHHH----HHHcCCCCcEEEE--cccc
Confidence 45689999999983 334454442 34699999963 2334444333 3344554 44432 2222
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
+ +....+.+=+|-|...|+|+.| | ..+|+.+ +-|+|.-+++
T Consensus 98 ~-----~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~ 139 (276)
T 3mgg_A 98 S-----LPFEDSSFDHIFVCFVLEHLQS-------P-EEALKSLKKVLKPGGTIT 139 (276)
T ss_dssp G-----CCSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEE
T ss_pred c-----CCCCCCCeeEEEEechhhhcCC-------H-HHHHHHHHHHcCCCcEEE
Confidence 2 2233345556667777888865 2 3566655 5689986544
No 10
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=94.39 E-value=0.16 Score=59.63 Aligned_cols=124 Identities=16% Similarity=0.265 Sum_probs=76.0
Q ss_pred HhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHH--HHhCCCcEEE
Q 039114 353 GKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKA--AERCNVPFEY 430 (632)
Q Consensus 353 LeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~f--A~~~gVpFeF 430 (632)
++.+.....-.|+|+|-|.| .+...|+.+ ++|.-+|||||.. ...++.+.+||... ++..|++ ..
T Consensus 714 LelL~~~~g~rVLDVGCGTG----~lai~LAr~--g~p~a~VtGVDIS------~emLe~AReRLa~~lnAkr~gl~-nV 780 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSG----SLLDSLLDY--PTSLQTIIGVDIS------PKGLARAAKMLHVKLNKEACNVK-SA 780 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSS----HHHHHHTSS--CCCCCEEEEEESC------HHHHHHHHHHHHHHTTTTCSSCS-EE
T ss_pred HHHhcccCCCEEEEECCCCC----HHHHHHHHh--CCCCCeEEEEECC------HHHHHHHHHHhhhccchhhcCCC-ce
Confidence 33333334557999999999 455566654 4566799999973 45677777777765 2344554 23
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEEEeecCCCC
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVHGVANGTYN 500 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~~e~n~~~n 500 (632)
+.+...++++.. ..+.+=+|-|...|+|+.+. .+..+|+. .+-|+|.++++...|..+|
T Consensus 781 efiqGDa~dLp~-----~d~sFDlVV~~eVLeHL~dp------~l~~~L~eI~RvLKPG~LIISTPN~eyN 840 (950)
T 3htx_A 781 TLYDGSILEFDS-----RLHDVDIGTCLEVIEHMEED------QACEFGEKVLSLFHPKLLIVSTPNYEFN 840 (950)
T ss_dssp EEEESCTTSCCT-----TSCSCCEEEEESCGGGSCHH------HHHHHHHHHHHTTCCSEEEEEECBGGGH
T ss_pred EEEECchHhCCc-----ccCCeeEEEEeCchhhCChH------HHHHHHHHHHHHcCCCEEEEEecCchhh
Confidence 333333333322 22334455567788998753 12356655 5779999888877775443
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=93.88 E-value=0.33 Score=50.51 Aligned_cols=110 Identities=12% Similarity=0.101 Sum_probs=59.2
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC--cEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV--PFE 429 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV--pFe 429 (632)
+++.+.....-+|+|+|-+.|. +...|+.+- |.+++|++|.| +.++.+.+++ +..|+ ..+
T Consensus 171 ~l~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~----~~~~~~~~v~ 232 (363)
T 3dp7_A 171 ALEIVFSHHPKRLLDIGGNTGK----WATQCVQYN---KEVEVTIVDLP-------QQLEMMRKQT----AGLSGSERIH 232 (363)
T ss_dssp HHHHHGGGCCSEEEEESCTTCH----HHHHHHHHS---TTCEEEEEECH-------HHHHHHHHHH----TTCTTGGGEE
T ss_pred HHHHhcccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEeCH-------HHHHHHHHHH----HhcCcccceE
Confidence 3444333445689999999994 344454432 55799999963 3355444443 34454 255
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
|..- .+.+.+ +.+ ++.+=+|-+..-||++.|+. ...+|+.+ +.|+|.-.+
T Consensus 233 ~~~~--d~~~~~---~~~-p~~~D~v~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l 283 (363)
T 3dp7_A 233 GHGA--NLLDRD---VPF-PTGFDAVWMSQFLDCFSEEE------VISILTRVAQSIGKDSKV 283 (363)
T ss_dssp EEEC--CCCSSS---CCC-CCCCSEEEEESCSTTSCHHH------HHHHHHHHHHHCCTTCEE
T ss_pred EEEc--cccccC---CCC-CCCcCEEEEechhhhCCHHH------HHHHHHHHHHhcCCCcEE
Confidence 5432 222111 001 11122344556778887542 24677776 558998644
No 12
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=93.86 E-value=1.7 Score=41.76 Aligned_cols=110 Identities=20% Similarity=0.253 Sum_probs=62.5
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FE 429 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-Fe 429 (632)
-+++.+.-...-+|+|+|-+.|. +...|+.+- + ++||||.. ...++.+.+++. ..|++ ++
T Consensus 12 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~--~---~v~~vD~s------~~~~~~a~~~~~----~~~~~~v~ 72 (239)
T 1xxl_A 12 LMIKTAECRAEHRVLDIGAGAGH----TALAFSPYV--Q---ECIGVDAT------KEMVEVASSFAQ----EKGVENVR 72 (239)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSH----HHHHHGGGS--S---EEEEEESC------HHHHHHHHHHHH----HHTCCSEE
T ss_pred hHHHHhCcCCCCEEEEEccCcCH----HHHHHHHhC--C---EEEEEECC------HHHHHHHHHHHH----HcCCCCeE
Confidence 34455555556789999999984 444555542 2 89999963 344554444443 33444 44
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHG 493 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~ 493 (632)
|.. ..++++ ....+.+=+|-|.+.++|+.| +...+-...+-|+|.-.++.
T Consensus 73 ~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 73 FQQ--GTAESL-----PFPDDSFDIITCRYAAHHFSD-------VRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp EEE--CBTTBC-----CSCTTCEEEEEEESCGGGCSC-------HHHHHHHHHHHEEEEEEEEE
T ss_pred EEe--cccccC-----CCCCCcEEEEEECCchhhccC-------HHHHHHHHHHHcCCCcEEEE
Confidence 432 233332 233344555566778888864 33344444567899865443
No 13
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=93.78 E-value=0.65 Score=44.68 Aligned_cols=120 Identities=13% Similarity=0.138 Sum_probs=64.3
Q ss_pred chhhhHHHhhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHH
Q 039114 340 FRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKK 419 (632)
Q Consensus 340 f~kfa~f~ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~ 419 (632)
+..-........|++.+.-...-+|+|+|.+.|. +...|+.+-+ .++||||.. ...++.+.+++..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~~~----~~v~~vD~s------~~~~~~a~~~~~~ 100 (266)
T 3ujc_A 35 YISSGGLEATKKILSDIELNENSKVLDIGSGLGG----GCMYINEKYG----AHTHGIDIC------SNIVNMANERVSG 100 (266)
T ss_dssp CCSTTHHHHHHHHTTTCCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHTCCS
T ss_pred ccccchHHHHHHHHHhcCCCCCCEEEEECCCCCH----HHHHHHHHcC----CEEEEEeCC------HHHHHHHHHHhhc
Confidence 3333344445667777765566799999999884 3333443322 489999963 2333333322211
Q ss_pred HHHhCCCcEEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 420 AAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 420 fA~~~gVpFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
. -..+|... .+++ +....+.+=+|-|...|+|+.++ .+ ..+|+.+ +-|+|.-.+
T Consensus 101 ~-----~~~~~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~~-----~~-~~~l~~~~~~L~pgG~l 155 (266)
T 3ujc_A 101 N-----NKIIFEAN--DILT-----KEFPENNFDLIYSRDAILALSLE-----NK-NKLFQKCYKWLKPTGTL 155 (266)
T ss_dssp C-----TTEEEEEC--CTTT-----CCCCTTCEEEEEEESCGGGSCHH-----HH-HHHHHHHHHHEEEEEEE
T ss_pred C-----CCeEEEEC--cccc-----CCCCCCcEEEEeHHHHHHhcChH-----HH-HHHHHHHHHHcCCCCEE
Confidence 1 23344322 2222 22223445556667788888422 23 4555554 668997543
No 14
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=92.72 E-value=2.6 Score=40.39 Aligned_cols=110 Identities=15% Similarity=0.154 Sum_probs=61.0
Q ss_pred hHHHHhcccc-CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 349 NRMIGKTTEK-ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 349 NqaILeA~~g-~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
...+++.+.+ ...-+|+|+|.|.|.. ...|+.+. |. ++||||.. ...++.+.+ .++..|++
T Consensus 34 ~~~~l~~l~~~~~~~~vLDiG~G~G~~----~~~l~~~~---~~-~v~~vD~s------~~~~~~a~~----~~~~~~~~ 95 (257)
T 3f4k_A 34 TRKAVSFINELTDDAKIADIGCGTGGQ----TLFLADYV---KG-QITGIDLF------PDFIEIFNE----NAVKANCA 95 (257)
T ss_dssp HHHHHTTSCCCCTTCEEEEETCTTSHH----HHHHHHHC---CS-EEEEEESC------HHHHHHHHH----HHHHTTCT
T ss_pred HHHHHHHHhcCCCCCeEEEeCCCCCHH----HHHHHHhC---CC-eEEEEECC------HHHHHHHHH----HHHHcCCC
Confidence 3344555532 3345899999999843 33444432 22 99999963 234444433 34556665
Q ss_pred --EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 428 --FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 428 --FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.+|.. ..++++ ....+.+=+|-|...|+|+ + + ..+|+.+ +-|+|.-.++
T Consensus 96 ~~~~~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~-~-------~-~~~l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 96 DRVKGIT--GSMDNL-----PFQNEELDLIWSEGAIYNI-G-------F-ERGMNEWSKYLKKGGFIA 147 (257)
T ss_dssp TTEEEEE--CCTTSC-----SSCTTCEEEEEEESCSCCC-C-------H-HHHHHHHHTTEEEEEEEE
T ss_pred CceEEEE--CChhhC-----CCCCCCEEEEEecChHhhc-C-------H-HHHHHHHHHHcCCCcEEE
Confidence 55533 223332 2333445555566778887 2 2 4566655 5589986543
No 15
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=92.20 E-value=0.67 Score=48.24 Aligned_cols=109 Identities=19% Similarity=0.149 Sum_probs=62.0
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC--c
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV--P 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV--p 427 (632)
..|++.+.-.+..+|+|+|-+.|. +...|+.+. |.+++|++|.| ..++.+.+++.+ .++ .
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~~----~~l~~~ 253 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGS----LMAAVLDAF---PGLRGTLLERP-------PVAEEARELLTG----RGLADR 253 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHHH----TTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCCccH----HHHHHHHHC---CCCeEEEEcCH-------HHHHHHHHhhhh----cCcCCc
Confidence 466777655566899999999995 444455442 56899999963 345555555443 343 2
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHH-hhCCCEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIK-RINPDLFV 491 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir-~L~P~Vfv 491 (632)
.+|.... +. +.+.. .-++ |-|..-||+..|+. ...+|+.++ .|+|.-.+
T Consensus 254 v~~~~~d--~~----~~~p~-~~D~--v~~~~vlh~~~d~~------~~~~L~~~~~~L~pgG~l 303 (369)
T 3gwz_A 254 CEILPGD--FF----ETIPD-GADV--YLIKHVLHDWDDDD------VVRILRRIATAMKPDSRL 303 (369)
T ss_dssp EEEEECC--TT----TCCCS-SCSE--EEEESCGGGSCHHH------HHHHHHHHHTTCCTTCEE
T ss_pred eEEeccC--CC----CCCCC-CceE--EEhhhhhccCCHHH------HHHHHHHHHHHcCCCCEE
Confidence 5554432 11 11111 1223 33445567776532 236777775 57897543
No 16
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=92.13 E-value=0.9 Score=42.17 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=54.4
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|.|.|. +...|+.+ | .++||||.. .+.++.+.++ .-..+|. ...+++
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s------~~~~~~a~~~--------~~~~~~~--~~d~~~- 95 (203)
T 3h2b_A 42 DGVILDVGSGTGR----WTGHLASL--G---HQIEGLEPA------TRLVELARQT--------HPSVTFH--HGTITD- 95 (203)
T ss_dssp CSCEEEETCTTCH----HHHHHHHT--T---CCEEEECCC------HHHHHHHHHH--------CTTSEEE--CCCGGG-
T ss_pred CCeEEEecCCCCH----HHHHHHhc--C---CeEEEEeCC------HHHHHHHHHh--------CCCCeEE--eCcccc-
Confidence 4579999999995 45566655 2 389999863 2334443333 1122332 222332
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
+....+.+=+|-|...|+|+..+ .+ ..+|+.+ +.|+|.-.++
T Consensus 96 ----~~~~~~~fD~v~~~~~l~~~~~~-----~~-~~~l~~~~~~L~pgG~l~ 138 (203)
T 3h2b_A 96 ----LSDSPKRWAGLLAWYSLIHMGPG-----EL-PDALVALRMAVEDGGGLL 138 (203)
T ss_dssp ----GGGSCCCEEEEEEESSSTTCCTT-----TH-HHHHHHHHHTEEEEEEEE
T ss_pred ----cccCCCCeEEEEehhhHhcCCHH-----HH-HHHHHHHHHHcCCCcEEE
Confidence 22333445566667788998743 23 4555554 6689976544
No 17
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=92.11 E-value=2 Score=44.99 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=63.6
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhC-C----CcEEEEeec
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERC-N----VPFEYSAIA 434 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~-g----VpFeF~~Ia 434 (632)
+.-+|+|+|.+.|.--..|.+.+ .|..++||||.. ...++.+.+++.+.+..+ | -..+|..-
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~------~~~~~v~gvD~s------~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~- 149 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLV------GEHGKVIGVDML------DNQLEVARKYVEYHAEKFFGSPSRSNVRFLKG- 149 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH------TTTCEEEEEECC------HHHHHHHHHTHHHHHHHHHSSTTCCCEEEEES-
T ss_pred CCCEEEEecCccCHHHHHHHHHh------CCCCEEEEEECC------HHHHHHHHHHHHHhhhhcccccCCCceEEEEc-
Confidence 34589999999994322232322 133599999973 456777777777776654 3 34555432
Q ss_pred ccccccC-cccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE-EEeec
Q 039114 435 QKWETIK-LDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV-HGVAN 496 (632)
Q Consensus 435 ~~~E~l~-~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv-~~e~n 496 (632)
.++++. .....+..+.+=+|-|..-|+|+.| + ..+|+.+ |-|+|.-.+ +.+..
T Consensus 150 -d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d-------~-~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 150 -FIENLATAEPEGVPDSSVDIVISNCVCNLSTN-------K-LALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp -CTTCGGGCBSCCCCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -cHHHhhhcccCCCCCCCEEEEEEccchhcCCC-------H-HHHHHHHHHHcCCCCEEEEEEec
Confidence 233221 0001233344444555566777754 3 3555555 668998543 33433
No 18
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=92.10 E-value=2.6 Score=42.44 Aligned_cols=114 Identities=15% Similarity=0.158 Sum_probs=65.4
Q ss_pred HHHHhcccc--CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 350 RMIGKTTEK--ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 350 qaILeA~~g--~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
..|++.+.. .+..+|+|+|-+.|. +...|+.+. |..++|++|.+ ..++.+.+++.+ .|++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~~----~~~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGL----FGIAVAQHN---PNAEIFGVDWA-------SVLEVAKENARI----QGVA 214 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHHH----HTCG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEEecH-------HHHHHHHHHHHh----cCCC
Confidence 456666654 566899999999994 344444442 45799999963 445555555543 3443
Q ss_pred --EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCE-EEEEee
Q 039114 428 --FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDL-FVHGVA 495 (632)
Q Consensus 428 --FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~V-fv~~e~ 495 (632)
++|... .+.+. .+. +.+=+|-|..-||++.++. ...+|+.+ +.|+|.- +++.+.
T Consensus 215 ~~v~~~~~--d~~~~-----~~~-~~~D~v~~~~~l~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 215 SRYHTIAG--SAFEV-----DYG-NDYDLVLLPNFLHHFDVAT------CEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp GGEEEEES--CTTTS-----CCC-SCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEEec--ccccC-----CCC-CCCcEEEEcchhccCCHHH------HHHHHHHHHHhCCCCcEEEEEee
Confidence 555432 22221 121 2244555666788875432 24566665 5579986 444443
No 19
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=92.10 E-value=1.7 Score=44.28 Aligned_cols=111 Identities=13% Similarity=0.155 Sum_probs=63.9
Q ss_pred HHHhccccCC-eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 351 MIGKTTEKAT-KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 351 aILeA~~g~~-~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
.|++.+.-.+ ..+|+|+|-+.|. +...|+.+- |.+++|++|.| +.++.+.+++. ..++.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~----~~~~~~~ 230 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGT----YLAQVLRRH---PQLTGQIWDLP-------TTRDAARKTIH----AHDLGGR 230 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECG-------GGHHHHHHHHH----HTTCGGG
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCH----HHHHHHHhC---CCCeEEEEECH-------HHHHHHHHHHH----hcCCCCc
Confidence 6777765445 7899999999995 444455432 45899999974 22444444433 34442
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
++|... .+.+.. . ..++.+=+|-|..-||++.|+. ...+|+.+ +.|+|.-.+
T Consensus 231 v~~~~~--d~~~~~--~--~~~~~~D~v~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l 283 (352)
T 3mcz_A 231 VEFFEK--NLLDAR--N--FEGGAADVVMLNDCLHYFDARE------AREVIGHAAGLVKPGGAL 283 (352)
T ss_dssp EEEEEC--CTTCGG--G--GTTCCEEEEEEESCGGGSCHHH------HHHHHHHHHHTEEEEEEE
T ss_pred eEEEeC--CcccCc--c--cCCCCccEEEEecccccCCHHH------HHHHHHHHHHHcCCCCEE
Confidence 555432 222111 0 0122344555667888886542 34677766 568998544
No 20
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=91.86 E-value=0.34 Score=46.52 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=60.6
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEE
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFE 429 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFe 429 (632)
..+++.+.....-+|+|+|.+.|. +...|+.+- ..++|||+.. ...++.+.+++... -..+
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~----~~~~l~~~~----~~~v~~vD~s------~~~~~~a~~~~~~~-----~~~~ 143 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGR----ITKNLLTKL----YATTDLLEPV------KHMLEEAKRELAGM-----PVGK 143 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTH----HHHHTHHHH----CSEEEEEESC------HHHHHHHHHHTTTS-----SEEE
T ss_pred HHHHHhhcccCCCEEEEECCCcCH----HHHHHHHhh----cCEEEEEeCC------HHHHHHHHHHhccC-----CceE
Confidence 455555554556789999999995 333333321 2489999863 23444444433221 2233
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEEEe
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVHGV 494 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~~e 494 (632)
|. ...++++ ....+.+=+|-|...|+|+.++ .+ ..+|+. .+.|+|.-.++..
T Consensus 144 ~~--~~d~~~~-----~~~~~~fD~v~~~~~l~~~~~~-----~~-~~~l~~~~~~LkpgG~l~i~ 196 (254)
T 1xtp_A 144 FI--LASMETA-----TLPPNTYDLIVIQWTAIYLTDA-----DF-VKFFKHCQQALTPNGYIFFK 196 (254)
T ss_dssp EE--ESCGGGC-----CCCSSCEEEEEEESCGGGSCHH-----HH-HHHHHHHHHHEEEEEEEEEE
T ss_pred EE--EccHHHC-----CCCCCCeEEEEEcchhhhCCHH-----HH-HHHHHHHHHhcCCCeEEEEE
Confidence 32 2233332 2223444455566778888642 12 345554 4678998655433
No 21
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=91.71 E-value=1.4 Score=44.74 Aligned_cols=110 Identities=10% Similarity=0.020 Sum_probs=58.5
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEE
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFE 429 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFe 429 (632)
..|++.+.-.. .+|+|+|-+.|. +...|+.+. |.+++|++|.|. .++.+.+++.+.--. -.++
T Consensus 158 ~~~~~~~~~~~-~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~a~~~~~~~~~~--~~v~ 220 (334)
T 2ip2_A 158 HEIPRLLDFRG-RSFVDVGGGSGE----LTKAILQAE---PSARGVMLDREG-------SLGVARDNLSSLLAG--ERVS 220 (334)
T ss_dssp HHHHHHSCCTT-CEEEEETCTTCH----HHHHHHHHC---TTCEEEEEECTT-------CTHHHHHHTHHHHHT--TSEE
T ss_pred HHHHHhCCCCC-CEEEEeCCCchH----HHHHHHHHC---CCCEEEEeCcHH-------HHHHHHHHHhhcCCC--CcEE
Confidence 55666654334 799999999994 344444432 457999999832 144444444433211 1244
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
|..- .+.+ .+. ..-++++ |..-||+..++. ...+|+.+ +.|+|.-.+
T Consensus 221 ~~~~--d~~~----~~~-~~~D~v~--~~~vl~~~~~~~------~~~~l~~~~~~L~pgG~l 268 (334)
T 2ip2_A 221 LVGG--DMLQ----EVP-SNGDIYL--LSRIIGDLDEAA------SLRLLGNCREAMAGDGRV 268 (334)
T ss_dssp EEES--CTTT----CCC-SSCSEEE--EESCGGGCCHHH------HHHHHHHHHHHSCTTCEE
T ss_pred EecC--CCCC----CCC-CCCCEEE--EchhccCCCHHH------HHHHHHHHHHhcCCCCEE
Confidence 4332 2221 111 1123333 556677776531 24677766 558998543
No 22
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=91.06 E-value=3.2 Score=39.31 Aligned_cols=98 Identities=12% Similarity=0.257 Sum_probs=54.8
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.++. . ....+|... .+++
T Consensus 54 ~~~vLDiG~G~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~----~--~~~~~~~~~--d~~~- 109 (242)
T 3l8d_A 54 EAEVLDVGCGDGY----GTYKLSRT-G----YKAVGVDIS------EVMIQKGKERG----E--GPDLSFIKG--DLSS- 109 (242)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHTTT----C--BTTEEEEEC--BTTB-
T ss_pred CCeEEEEcCCCCH----HHHHHHHc-C----CeEEEEECC------HHHHHHHHhhc----c--cCCceEEEc--chhc-
Confidence 3589999999984 44556655 2 389999963 23333332221 1 233444332 2222
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHG 493 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~ 493 (632)
+....+.+=+|-|...|+|+.+ +...+-...+.|+|.-.++.
T Consensus 110 ----~~~~~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 110 ----LPFENEQFEAIMAINSLEWTEE-------PLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp ----CSSCTTCEEEEEEESCTTSSSC-------HHHHHHHHHHHEEEEEEEEE
T ss_pred ----CCCCCCCccEEEEcChHhhccC-------HHHHHHHHHHHhCCCeEEEE
Confidence 2233445556667788888854 33444444567899865443
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=90.39 E-value=1.3 Score=41.66 Aligned_cols=119 Identities=15% Similarity=0.165 Sum_probs=66.5
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-----
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV----- 426 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV----- 426 (632)
|++.+...+.-.|+|+|-+.|. +...|+.+. |..++||||.. ...++.+.+++.. .++
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s------~~~~~~a~~~~~~----~~~~~~~~ 83 (219)
T 3jwg_A 21 VVAVLKSVNAKKVIDLGCGEGN----LLSLLLKDK---SFEQITGVDVS------YSVLERAKDRLKI----DRLPEMQR 83 (219)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHTST---TCCEEEEEESC------HHHHHHHHHHHTG----GGSCHHHH
T ss_pred HHHHHhhcCCCEEEEecCCCCH----HHHHHHhcC---CCCEEEEEECC------HHHHHHHHHHHHh----hccccccC
Confidence 4444443445689999999994 555566542 44799999973 3445555544422 222
Q ss_pred -cEEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeecCCCC
Q 039114 427 -PFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVANGTYN 500 (632)
Q Consensus 427 -pFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~n 500 (632)
.++|..- .++.+.. ..+.+=+|-|...|+|+.++ .+..+|+.+ +.|+|..+++...+..++
T Consensus 84 ~~v~~~~~--d~~~~~~-----~~~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~~i~~~~~~~~ 146 (219)
T 3jwg_A 84 KRISLFQS--SLVYRDK-----RFSGYDAATVIEVIEHLDEN------RLQAFEKVLFEFTRPQTVIVSTPNKEYN 146 (219)
T ss_dssp TTEEEEEC--CSSSCCG-----GGTTCSEEEEESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEEBGGGG
T ss_pred cceEEEeC--ccccccc-----ccCCCCEEEEHHHHHhCCHH------HHHHHHHHHHHhhCCCEEEEEccchhhh
Confidence 2344322 2222211 11112233366778888542 134666666 568999887777765544
No 24
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=90.17 E-value=2.2 Score=43.88 Aligned_cols=114 Identities=10% Similarity=0.012 Sum_probs=64.4
Q ss_pred hhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 348 TNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 348 ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
....|++.+.-.+.-+|+|+|-+.|. +...|+.+- |.+++|+||.| ..++.+.+++. ..|++
T Consensus 178 ~~~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~----~~~~~ 239 (359)
T 1x19_A 178 AIQLLLEEAKLDGVKKMIDVGGGIGD----ISAAMLKHF---PELDSTILNLP-------GAIDLVNENAA----EKGVA 239 (359)
T ss_dssp HHHHHHHHCCCTTCCEEEEESCTTCH----HHHHHHHHC---TTCEEEEEECG-------GGHHHHHHHHH----HTTCT
T ss_pred hHHHHHHhcCCCCCCEEEEECCcccH----HHHHHHHHC---CCCeEEEEecH-------HHHHHHHHHHH----hcCCC
Confidence 34567777765566799999999995 333444332 46899999973 23555554443 33443
Q ss_pred --EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHH-hhCCCEEE-EEe
Q 039114 428 --FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIK-RINPDLFV-HGV 494 (632)
Q Consensus 428 --FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir-~L~P~Vfv-~~e 494 (632)
.+|..- .+.+. .+....+++ +..-||++.|+. ...+|+.++ .|+|.-.+ +.+
T Consensus 240 ~~v~~~~~--d~~~~-----~~~~~D~v~--~~~vlh~~~d~~------~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 240 DRMRGIAV--DIYKE-----SYPEADAVL--FCRILYSANEQL------STIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp TTEEEEEC--CTTTS-----CCCCCSEEE--EESCGGGSCHHH------HHHHHHHHHTTCCTTCEEEEEE
T ss_pred CCEEEEeC--ccccC-----CCCCCCEEE--EechhccCCHHH------HHHHHHHHHHhcCCCCEEEEEe
Confidence 555432 22222 122234444 445677776531 346677664 57997543 444
No 25
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=89.55 E-value=2.1 Score=39.94 Aligned_cols=95 Identities=20% Similarity=0.289 Sum_probs=54.3
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-.|+|+|.|.|. +...|+.+ + .++||||.. ...++.+.+++ ++.|.- ..++.+
T Consensus 44 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~-------~~~~~~----~d~~~~ 97 (211)
T 3e23_A 44 GAKILELGCGAGY----QAEAMLAA-G----FDVDATDGS------PELAAEASRRL-------GRPVRT----MLFHQL 97 (211)
T ss_dssp TCEEEESSCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHH-------TSCCEE----CCGGGC
T ss_pred CCcEEEECCCCCH----HHHHHHHc-C----CeEEEECCC------HHHHHHHHHhc-------CCceEE----eeeccC
Confidence 3579999999985 45556655 2 489999963 23455444443 454331 122222
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
. ..+.+=+|-|...|+|+.++ -...+|+.+ +.|+|.-+++.
T Consensus 98 -----~-~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 98 -----D-AIDAYDAVWAHACLLHVPRD------ELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp -----C-CCSCEEEEEECSCGGGSCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred -----C-CCCcEEEEEecCchhhcCHH------HHHHHHHHHHHhcCCCcEEEE
Confidence 2 22334455566778888632 124556555 56899865543
No 26
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=89.46 E-value=1.8 Score=44.52 Aligned_cols=113 Identities=18% Similarity=0.212 Sum_probs=64.0
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
..|++.+.-.+..+|+|+|-+.| .+...|+.+- |.+++|+||.| ..++.+.+++. ..|++
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---~~~~~~~~D~~-------~~~~~a~~~~~----~~~~~~~ 233 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNG----GMLAAIALRA---PHLRGTLVELA-------GPAERARRRFA----DAGLADR 233 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHH----HTTCTTT
T ss_pred HHHHHhCCCCCCCEEEEECCCcC----HHHHHHHHHC---CCCEEEEEeCH-------HHHHHHHHHHH----hcCCCCc
Confidence 45666665455679999999999 3444455442 46899999862 34555555443 34543
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCE-EEEEee
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDL-FVHGVA 495 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~V-fv~~e~ 495 (632)
.+|... .+.+ .+ +..+=+|-|..-|||+.++. ...+|+.+ +.|+|.- +++.+.
T Consensus 234 v~~~~~--d~~~----~~---~~~~D~v~~~~vl~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 234 VTVAEG--DFFK----PL---PVTADVVLLSFVLLNWSDED------ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEC--CTTS----CC---SCCEEEEEEESCGGGSCHHH------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEeC--CCCC----cC---CCCCCEEEEeccccCCCHHH------HHHHHHHHHHhcCCCcEEEEEec
Confidence 555432 1211 11 11243455666778876531 23566666 5579986 344444
No 27
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=89.24 E-value=1.4 Score=41.28 Aligned_cols=107 Identities=14% Similarity=0.204 Sum_probs=57.0
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEE
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFE 429 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFe 429 (632)
..+++.+...+.-.|+|+|.|.|. +...|+.+ + .++||||.. ...++.+.+++. -+|.
T Consensus 35 ~~~l~~~~~~~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~~-----~~~~-- 92 (220)
T 3hnr_A 35 EDILEDVVNKSFGNVLEFGVGTGN----LTNKLLLA-G----RTVYGIEPS------REMRMIAKEKLP-----KEFS-- 92 (220)
T ss_dssp HHHHHHHHHTCCSEEEEECCTTSH----HHHHHHHT-T----CEEEEECSC------HHHHHHHHHHSC-----TTCC--
T ss_pred HHHHHHhhccCCCeEEEeCCCCCH----HHHHHHhC-C----CeEEEEeCC------HHHHHHHHHhCC-----CceE--
Confidence 455565554566789999999994 45556655 2 489999863 233443333222 1333
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
|. ...++++... ..=.+| -|...|+|+.+. .+..+|+.+ +.|+|.-.++
T Consensus 93 ~~--~~d~~~~~~~----~~fD~v--~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~ 142 (220)
T 3hnr_A 93 IT--EGDFLSFEVP----TSIDTI--VSTYAFHHLTDD------EKNVAIAKYSQLLNKGGKIV 142 (220)
T ss_dssp EE--SCCSSSCCCC----SCCSEE--EEESCGGGSCHH------HHHHHHHHHHHHSCTTCEEE
T ss_pred EE--eCChhhcCCC----CCeEEE--EECcchhcCChH------HHHHHHHHHHHhcCCCCEEE
Confidence 22 2223222211 122333 344677888643 122356555 6689985544
No 28
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=88.68 E-value=1.9 Score=43.76 Aligned_cols=108 Identities=16% Similarity=0.076 Sum_probs=60.9
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-....+|+|+|-+.| .+...|+.+- |.+++|++|.| ..++.+.+++.+ .++. .
T Consensus 160 ~~~~~~~~~~~~~vlDvG~G~G----~~~~~l~~~~---p~~~~~~~D~~-------~~~~~a~~~~~~----~~~~~~v 221 (332)
T 3i53_A 160 GIAAKYDWAALGHVVDVGGGSG----GLLSALLTAH---EDLSGTVLDLQ-------GPASAAHRRFLD----TGLSGRA 221 (332)
T ss_dssp TGGGSSCCGGGSEEEEETCTTS----HHHHHHHHHC---TTCEEEEEECH-------HHHHHHHHHHHH----TTCTTTE
T ss_pred HHHHhCCCCCCCEEEEeCCChh----HHHHHHHHHC---CCCeEEEecCH-------HHHHHHHHhhhh----cCcCcCe
Confidence 3444443344579999999999 3444555432 56799999863 345555555443 3442 5
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|.... +. +.+.. .-+ +|-|..-||++.|+. ...+|+.+ +.|+|.-.+
T Consensus 222 ~~~~~d--~~----~~~p~-~~D--~v~~~~vlh~~~~~~------~~~~l~~~~~~L~pgG~l 270 (332)
T 3i53_A 222 QVVVGS--FF----DPLPA-GAG--GYVLSAVLHDWDDLS------AVAILRRCAEAAGSGGVV 270 (332)
T ss_dssp EEEECC--TT----SCCCC-SCS--EEEEESCGGGSCHHH------HHHHHHHHHHHHTTTCEE
T ss_pred EEecCC--CC----CCCCC-CCc--EEEEehhhccCCHHH------HHHHHHHHHHhcCCCCEE
Confidence 554432 11 11111 112 344556778887642 34677766 568998544
No 29
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=88.58 E-value=5.4 Score=40.02 Aligned_cols=109 Identities=15% Similarity=0.112 Sum_probs=61.3
Q ss_pred HHHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-
Q 039114 350 RMIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP- 427 (632)
Q Consensus 350 qaILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp- 427 (632)
+.|++.+. -...-+|+|+|.|.|. +...|+.+.+ .++||||.. .+.++.+.++ ++..|++
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s------~~~~~~a~~~----~~~~~~~~ 167 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGG----SMVMAHRRFG----SRVEGVTLS------AAQADFGNRR----ARELRIDD 167 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHH----HHHTTCTT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCH----HHHHHHHHcC----CEEEEEeCC------HHHHHHHHHH----HHHcCCCC
Confidence 34666665 3445689999999883 3344444422 589999963 3445444443 4455665
Q ss_pred -EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 428 -FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 428 -FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.+|.. ..++++ ....+.+=+|-|...|+|+ + ...+|+.+ +-|+|.-.++
T Consensus 168 ~v~~~~--~d~~~~-----~~~~~~fD~V~~~~~l~~~-~--------~~~~l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 168 HVRSRV--CNMLDT-----PFDKGAVTASWNNESTMYV-D--------LHDLFSEHSRFLKVGGRYV 218 (312)
T ss_dssp TEEEEE--CCTTSC-----CCCTTCEEEEEEESCGGGS-C--------HHHHHHHHHHHEEEEEEEE
T ss_pred ceEEEE--CChhcC-----CCCCCCEeEEEECCchhhC-C--------HHHHHHHHHHHcCCCcEEE
Confidence 55543 223322 2223444455566677777 3 24555554 6789986443
No 30
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=88.14 E-value=3.3 Score=42.30 Aligned_cols=113 Identities=16% Similarity=0.175 Sum_probs=62.8
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
+.|++.+.-.+..+|+|+|-+.|. +...|+.+. |.+++|++|.| ..++.+.+++. ..|++
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-------~~~~~a~~~~~----~~~~~~~ 234 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGG----FAAAIARRA---PHVSATVLEMA-------GTVDTARSYLK----DEGLSDR 234 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECT-------THHHHHHHHHH----HTTCTTT
T ss_pred HHHHHhCCCccCcEEEEeCCcCcH----HHHHHHHhC---CCCEEEEecCH-------HHHHHHHHHHH----hcCCCCc
Confidence 456666654556799999999994 334444332 46899999963 23555544443 34553
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEE-EEEee
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLF-VHGVA 495 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vf-v~~e~ 495 (632)
++|... .+.+ .+ +..+=+|-|..-||++.++. ...+|+.+ +.|+|.-. ++.+.
T Consensus 235 v~~~~~--d~~~----~~---~~~~D~v~~~~vl~~~~~~~------~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 235 VDVVEG--DFFE----PL---PRKADAIILSFVLLNWPDHD------AVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEEEEC--CTTS----CC---SSCEEEEEEESCGGGSCHHH------HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred eEEEeC--CCCC----CC---CCCccEEEEcccccCCCHHH------HHHHHHHHHHhcCCCcEEEEEEE
Confidence 555442 2211 11 11233455556677776431 23566666 55799863 44443
No 31
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=87.80 E-value=14 Score=36.73 Aligned_cols=107 Identities=13% Similarity=0.237 Sum_probs=57.5
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-.+.-+|+|+|.|.|. +...|+.+.| .++|||+.. .+.++.+.+++ +..|+. .
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~v 142 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGT----TMRRAVERFD----VNVIGLTLS------KNQHARCEQVL----ASIDTNRSR 142 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHHH----HTSCCSSCE
T ss_pred HHHHhcCCCCcCEEEEEcccchH----HHHHHHHHCC----CEEEEEECC------HHHHHHHHHHH----HhcCCCCce
Confidence 45555544455689999998884 3344444322 389999963 34454444433 344553 4
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|. ...++++. +.+=+|-|...|+|+.++ .+ ..+|+.+ +-|+|.-.+
T Consensus 143 ~~~--~~d~~~~~--------~~fD~v~~~~~l~~~~~~-----~~-~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 143 QVL--LQGWEDFA--------EPVDRIVSIEAFEHFGHE-----NY-DDFFKRCFNIMPADGRM 190 (318)
T ss_dssp EEE--ESCGGGCC--------CCCSEEEEESCGGGTCGG-----GH-HHHHHHHHHHSCTTCEE
T ss_pred EEE--ECChHHCC--------CCcCEEEEeChHHhcCHH-----HH-HHHHHHHHHhcCCCcEE
Confidence 443 22333331 222233345667888642 23 4555554 668998543
No 32
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=87.69 E-value=6.2 Score=37.83 Aligned_cols=111 Identities=16% Similarity=0.272 Sum_probs=64.0
Q ss_pred hhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 348 TNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 348 ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
.-..|++.+...+.-.|+|+|.+.|. +...|+.+ |+. ++||||.. .+.++.+.+++. +..
T Consensus 32 ~~~~l~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--~~~--~v~~vD~s------~~~~~~a~~~~~------~~~ 91 (253)
T 3g5l_A 32 EWHELKKMLPDFNQKTVLDLGCGFGW----HCIYAAEH--GAK--KVLGIDLS------ERMLTEAKRKTT------SPV 91 (253)
T ss_dssp HHHHHHTTCCCCTTCEEEEETCTTCH----HHHHHHHT--TCS--EEEEEESC------HHHHHHHHHHCC------CTT
T ss_pred hHHHHHHhhhccCCCEEEEECCCCCH----HHHHHHHc--CCC--EEEEEECC------HHHHHHHHHhhc------cCC
Confidence 34556666665567789999999993 44555555 222 89999963 233444333322 233
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
.+|... .+++ +....+.+=+|-|...|+|+.+ + ..+|+.+ +-|+|.-.++.
T Consensus 92 ~~~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 92 VCYEQK--AIED-----IAIEPDAYNVVLSSLALHYIAS-------F-DDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp EEEEEC--CGGG-----CCCCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEc--chhh-----CCCCCCCeEEEEEchhhhhhhh-------H-HHHHHHHHHHcCCCcEEEE
Confidence 444332 2222 2333344556666678888843 2 4566665 55899876554
No 33
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=87.25 E-value=4.3 Score=39.83 Aligned_cols=107 Identities=12% Similarity=0.227 Sum_probs=57.3
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-...-+|+|+|.|.|. +...|+.+.| .++|||+.. .+.++.+.+++ +..|+. .
T Consensus 55 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvd~s------~~~~~~a~~~~----~~~~~~~~~ 116 (287)
T 1kpg_A 55 LALGKLGLQPGMTLLDVGCGWGA----TMMRAVEKYD----VNVVGLTLS------KNQANHVQQLV----ANSENLRSK 116 (287)
T ss_dssp HHHTTTTCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEESC------HHHHHHHHHHH----HTCCCCSCE
T ss_pred HHHHHcCCCCcCEEEEECCcccH----HHHHHHHHcC----CEEEEEECC------HHHHHHHHHHH----HhcCCCCCe
Confidence 34555544455689999998874 4445553332 299999963 34454444433 344543 3
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|. ...++++. +.+=+|-|...|+|+.++ .+ ..+|+.+ +-|+|.-.+
T Consensus 117 ~~~--~~d~~~~~--------~~fD~v~~~~~l~~~~~~-----~~-~~~l~~~~~~LkpgG~l 164 (287)
T 1kpg_A 117 RVL--LAGWEQFD--------EPVDRIVSIGAFEHFGHE-----RY-DAFFSLAHRLLPADGVM 164 (287)
T ss_dssp EEE--ESCGGGCC--------CCCSEEEEESCGGGTCTT-----TH-HHHHHHHHHHSCTTCEE
T ss_pred EEE--ECChhhCC--------CCeeEEEEeCchhhcChH-----HH-HHHHHHHHHhcCCCCEE
Confidence 432 22333332 212233355678888642 23 3455554 668998543
No 34
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=87.04 E-value=4 Score=40.06 Aligned_cols=105 Identities=10% Similarity=0.143 Sum_probs=56.4
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~ 431 (632)
+++.+.-...-+|+|+|.|.|.- ...|+. + ..++||||.. ...++.+.+++ -++.|.
T Consensus 49 l~~~l~~~~~~~vLDiGcG~G~~----~~~l~~-~----~~~v~gvD~s------~~~~~~a~~~~------~~~~~~-- 105 (279)
T 3ccf_A 49 LLQLLNPQPGEFILDLGCGTGQL----TEKIAQ-S----GAEVLGTDNA------ATMIEKARQNY------PHLHFD-- 105 (279)
T ss_dssp HHHHHCCCTTCEEEEETCTTSHH----HHHHHH-T----TCEEEEEESC------HHHHHHHHHHC------TTSCEE--
T ss_pred HHHHhCCCCCCEEEEecCCCCHH----HHHHHh-C----CCeEEEEECC------HHHHHHHHhhC------CCCEEE--
Confidence 34444434445899999999853 333443 2 2589999963 23344443332 134332
Q ss_pred eecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEEEee
Q 039114 432 AIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVHGVA 495 (632)
Q Consensus 432 ~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~~e~ 495 (632)
. ..++.+ .. ++.+=+|-|...|+|+.| |. .+|+. .|-|+|.-.++...
T Consensus 106 ~--~d~~~~-----~~-~~~fD~v~~~~~l~~~~d-------~~-~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 106 V--ADARNF-----RV-DKPLDAVFSNAMLHWVKE-------PE-AAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp E--CCTTTC-----CC-SSCEEEEEEESCGGGCSC-------HH-HHHHHHHHHEEEEEEEEEEE
T ss_pred E--CChhhC-----Cc-CCCcCEEEEcchhhhCcC-------HH-HHHHHHHHhcCCCcEEEEEe
Confidence 2 122222 22 233445556677888764 33 45554 46789986554433
No 35
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=86.51 E-value=10 Score=36.79 Aligned_cols=109 Identities=10% Similarity=0.080 Sum_probs=62.9
Q ss_pred HHHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-
Q 039114 350 RMIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP- 427 (632)
Q Consensus 350 qaILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp- 427 (632)
..+++.+. -...-+|+|+|.|.| .+...|+.+ |..++||||.. ...++.+.++ ++..|++
T Consensus 35 ~~~l~~l~~~~~~~~vLDiGcG~G----~~~~~la~~----~~~~v~gvD~s------~~~~~~a~~~----~~~~~~~~ 96 (267)
T 3kkz_A 35 LKALSFIDNLTEKSLIADIGCGTG----GQTMVLAGH----VTGQVTGLDFL------SGFIDIFNRN----ARQSGLQN 96 (267)
T ss_dssp HHHHTTCCCCCTTCEEEEETCTTC----HHHHHHHTT----CSSEEEEEESC------HHHHHHHHHH----HHHTTCTT
T ss_pred HHHHHhcccCCCCCEEEEeCCCCC----HHHHHHHhc----cCCEEEEEeCC------HHHHHHHHHH----HHHcCCCc
Confidence 33455554 234568999999988 455566666 34699999963 2344444443 4455665
Q ss_pred -EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 428 -FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 428 -FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.+|.. ..++++ ....+.+=+|-|...++|+ + + ..+|+.+ +-|+|.-.++
T Consensus 97 ~v~~~~--~d~~~~-----~~~~~~fD~i~~~~~~~~~-~-------~-~~~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 97 RVTGIV--GSMDDL-----PFRNEELDLIWSEGAIYNI-G-------F-ERGLNEWRKYLKKGGYLA 147 (267)
T ss_dssp TEEEEE--CCTTSC-----CCCTTCEEEEEESSCGGGT-C-------H-HHHHHHHGGGEEEEEEEE
T ss_pred CcEEEE--cChhhC-----CCCCCCEEEEEEcCCceec-C-------H-HHHHHHHHHHcCCCCEEE
Confidence 55543 233332 2223445556566677777 3 2 4556655 5689985443
No 36
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=85.68 E-value=4.5 Score=37.92 Aligned_cols=115 Identities=15% Similarity=0.179 Sum_probs=63.1
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc----
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP---- 427 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp---- 427 (632)
|++.+.....-.|+|+|-+.|. +...|+.+. |..++||||.. ...++.+.+++ +..+++
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~~---~~~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~~~ 83 (217)
T 3jwh_A 21 VVAALKQSNARRVIDLGCGQGN----LLKILLKDS---FFEQITGVDVS------YRSLEIAQERL----DRLRLPRNQW 83 (217)
T ss_dssp HHHHHHHTTCCEEEEETCTTCH----HHHHHHHCT---TCSEEEEEESC------HHHHHHHHHHH----TTCCCCHHHH
T ss_pred HHHHHHhcCCCEEEEeCCCCCH----HHHHHHhhC---CCCEEEEEECC------HHHHHHHHHHH----HHhcCCcccC
Confidence 3344433444589999999994 445566542 34699999973 34455554443 333442
Q ss_pred --EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHH-hhCCCEEEEEeec
Q 039114 428 --FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIK-RINPDLFVHGVAN 496 (632)
Q Consensus 428 --FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir-~L~P~Vfv~~e~n 496 (632)
++|..- .++..... ...=++|+ |...|+|+.+. ....+|+.++ -|+|.-+++...+
T Consensus 84 ~~v~~~~~--d~~~~~~~---~~~fD~v~--~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 84 ERLQLIQG--ALTYQDKR---FHGYDAAT--VIEVIEHLDLS------RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp TTEEEEEC--CTTSCCGG---GCSCSEEE--EESCGGGCCHH------HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cceEEEeC--Cccccccc---CCCcCEEe--eHHHHHcCCHH------HHHHHHHHHHHHcCCCEEEEEccC
Confidence 444332 22221111 11112333 66678888532 2356777664 5899987776655
No 37
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=85.01 E-value=8.7 Score=37.80 Aligned_cols=100 Identities=10% Similarity=0.174 Sum_probs=57.9
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeeccc
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQK 436 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~ 436 (632)
...-+|+|+|.|.|..-..|.+.+ + .++|||+.. ...++.+.+++. ..|++ ++|.. ..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~----~----~~v~gvD~s------~~~~~~a~~~~~----~~~~~~~~~~~~--~d 140 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKF----G----VSIDCLNIA------PVQNKRNEEYNN----QAGLADNITVKY--GS 140 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH----C----CEEEEEESC------HHHHHHHHHHHH----HHTCTTTEEEEE--CC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHh----C----CEEEEEeCC------HHHHHHHHHHHH----hcCCCcceEEEE--cC
Confidence 345689999999886444444433 2 389999973 344555544443 33443 45433 22
Q ss_pred ccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 437 WETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 437 ~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+++ +....+.+=+|-|...|+|+.+ + ..+|+.+ |-|+|.-.+
T Consensus 141 ~~~-----~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~LkpgG~l 183 (297)
T 2o57_A 141 FLE-----IPCEDNSYDFIWSQDAFLHSPD-------K-LKVFQECARVLKPRGVM 183 (297)
T ss_dssp TTS-----CSSCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEE
T ss_pred ccc-----CCCCCCCEeEEEecchhhhcCC-------H-HHHHHHHHHHcCCCeEE
Confidence 332 2233345556667788888865 2 4555555 668998543
No 38
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=83.96 E-value=11 Score=36.34 Aligned_cols=108 Identities=19% Similarity=0.271 Sum_probs=60.8
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-...-+|+|+|.+.|. +...|+.+.+ .++|||+.. ...++.+.++ ++..|++ .
T Consensus 52 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~~~----~~v~gvD~s------~~~~~~a~~~----~~~~~~~~~~ 113 (273)
T 3bus_A 52 EMIALLDVRSGDRVLDVGCGIGK----PAVRLATARD----VRVTGISIS------RPQVNQANAR----ATAAGLANRV 113 (273)
T ss_dssp HHHHHSCCCTTCEEEEESCTTSH----HHHHHHHHSC----CEEEEEESC------HHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHhcC----CEEEEEeCC------HHHHHHHHHH----HHhcCCCcce
Confidence 44455543455689999999884 3344444332 599999963 2344444333 3344554 4
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|... .+++ +....+.+=+|-|...|+|+.+ + ..+|+.+ +-|+|.-.+
T Consensus 114 ~~~~~--d~~~-----~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l 162 (273)
T 3bus_A 114 TFSYA--DAMD-----LPFEDASFDAVWALESLHHMPD-------R-GRALREMARVLRPGGTV 162 (273)
T ss_dssp EEEEC--CTTS-----CCSCTTCEEEEEEESCTTTSSC-------H-HHHHHHHHTTEEEEEEE
T ss_pred EEEEC--cccc-----CCCCCCCccEEEEechhhhCCC-------H-HHHHHHHHHHcCCCeEE
Confidence 54332 2222 2233344445556777888864 2 4666666 457998543
No 39
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=83.63 E-value=26 Score=34.77 Aligned_cols=109 Identities=16% Similarity=0.172 Sum_probs=59.9
Q ss_pred eEEEEccccc---ccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccc
Q 039114 362 VHIIDFGISY---GFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWE 438 (632)
Q Consensus 362 VHIIDfgI~~---G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E 438 (632)
-+|+|+|-|. | .+..+++... |..|||+||.. ...++...+++.. .-..+|... .+.
T Consensus 79 ~~vLDlGcG~pt~G-~~~~~~~~~~------p~~~v~~vD~s------p~~l~~Ar~~~~~-----~~~v~~~~~--D~~ 138 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQ-NTHEVAQSVN------PDARVVYVDID------PMVLTHGRALLAK-----DPNTAVFTA--DVR 138 (274)
T ss_dssp CEEEEETCCSCCSS-CHHHHHHHHC------TTCEEEEEESS------HHHHHHHHHHHTT-----CTTEEEEEC--CTT
T ss_pred CEEEEECCCCCCCC-hHHHHHHHhC------CCCEEEEEECC------hHHHHHHHHhcCC-----CCCeEEEEe--eCC
Confidence 4899999999 8 3333333321 34799999973 3445555555421 112444332 222
Q ss_pred ccCc--c--c--ccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHh-hCCCE-EEEEeec
Q 039114 439 TIKL--D--D--LKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKR-INPDL-FVHGVAN 496 (632)
Q Consensus 439 ~l~~--e--~--L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~-L~P~V-fv~~e~n 496 (632)
+... . . -.++.+...+|-+..-|||+.|+. ...+|+.|++ |+|.- +++.+..
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~------~~~~l~~~~~~L~pGG~l~i~~~~ 198 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDV------VDRVVGAYRDALAPGSYLFMTSLV 198 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTT------HHHHHHHHHHHSCTTCEEEEEEEB
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcHH------HHHHHHHHHHhCCCCcEEEEEEec
Confidence 2110 0 0 012223566777888999998752 3467777655 99974 3444433
No 40
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=83.63 E-value=18 Score=35.95 Aligned_cols=105 Identities=12% Similarity=0.146 Sum_probs=58.8
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeecccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKW 437 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~ 437 (632)
..-+|+|+|.|.|. +...|+.+ ..|..++||||.. ...++.+.++ ++..|++ .+|.. ..+
T Consensus 118 ~~~~vLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s------~~~~~~a~~~----~~~~~~~~~v~~~~--~d~ 179 (305)
T 3ocj_A 118 PGCVVASVPCGWMS----ELLALDYS--ACPGVQLVGIDYD------PEALDGATRL----AAGHALAGQITLHR--QDA 179 (305)
T ss_dssp TTCEEEETTCTTCH----HHHTSCCT--TCTTCEEEEEESC------HHHHHHHHHH----HTTSTTGGGEEEEE--CCG
T ss_pred CCCEEEEecCCCCH----HHHHHHHh--cCCCCeEEEEECC------HHHHHHHHHH----HHhcCCCCceEEEE--Cch
Confidence 34579999999883 34445422 2356799999973 2344444433 3455665 55543 223
Q ss_pred cccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 438 ETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 438 E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
.++. .. +.+=+|-|..-++|+.+.. ....+|+.+ +.|+|.-.++.
T Consensus 180 ~~~~-----~~-~~fD~v~~~~~~~~~~~~~-----~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 180 WKLD-----TR-EGYDLLTSNGLNIYEPDDA-----RVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp GGCC-----CC-SCEEEEECCSSGGGCCCHH-----HHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCC-----cc-CCeEEEEECChhhhcCCHH-----HHHHHHHHHHHhcCCCeEEEE
Confidence 3322 22 3344555666778887531 122466665 56899866543
No 41
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=83.52 E-value=8.9 Score=39.49 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=72.6
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcC-CCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFR-PGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFE 429 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R-~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFe 429 (632)
+|++.+.. --.|+|+|-|.|- ||.- -..+|..+++++|.. ...++-+ .+++..+|+++.
T Consensus 125 ~i~~~i~~--p~~VLDLGCG~Gp--------LAl~~~~~~p~a~y~a~DId------~~~le~a----~~~l~~~g~~~~ 184 (281)
T 3lcv_B 125 ELFRHLPR--PNTLRDLACGLNP--------LAAPWMGLPAETVYIASDID------ARLVGFV----DEALTRLNVPHR 184 (281)
T ss_dssp HHGGGSCC--CSEEEETTCTTGG--------GCCTTTTCCTTCEEEEEESB------HHHHHHH----HHHHHHTTCCEE
T ss_pred HHHhccCC--CceeeeeccCccH--------HHHHHHhhCCCCEEEEEeCC------HHHHHHH----HHHHHhcCCCce
Confidence 34555533 3378999999882 3321 123478999999973 2334444 445567799988
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEEeecCCCC--CCchHHH
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTYN--SPFFVSR 507 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~e~n~~~n--sp~F~~R 507 (632)
|.... +....+. .+..++++| -.+|+|-++ .+...++.+..|+|..+++.-.--+.+ +|-+
T Consensus 185 ~~v~D-----~~~~~p~-~~~DvaL~l--kti~~Le~q------~kg~g~~ll~aL~~~~vvVSfp~ksl~Grs~gm--- 247 (281)
T 3lcv_B 185 TNVAD-----LLEDRLD-EPADVTLLL--KTLPCLETQ------QRGSGWEVIDIVNSPNIVVTFPTKSLGQRSKGM--- 247 (281)
T ss_dssp EEECC-----TTTSCCC-SCCSEEEET--TCHHHHHHH------STTHHHHHHHHSSCSEEEEEEECC-------CH---
T ss_pred EEEee-----ecccCCC-CCcchHHHH--HHHHHhhhh------hhHHHHHHHHHhCCCCEEEeccchhhcCCCcch---
Confidence 74432 2222221 224445444 345666443 234566999999999887754432211 2333
Q ss_pred HHHHHHHHHHHHHH
Q 039114 508 FKEAMFHFSALFDM 521 (632)
Q Consensus 508 F~EAL~yYsAlFDs 521 (632)
-..|+..|+.
T Consensus 248 ----~~~Y~~~~e~ 257 (281)
T 3lcv_B 248 ----FQNYSQSFES 257 (281)
T ss_dssp ----HHHHHHHHHH
T ss_pred ----hhHHHHHHHH
Confidence 3457777765
No 42
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=83.19 E-value=26 Score=33.06 Aligned_cols=101 Identities=10% Similarity=0.107 Sum_probs=55.0
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIK 441 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~ 441 (632)
-.|+|+|.|.|. +...|+. +..++||||.. ...++.+.+++.+.-. .-..+|.. ..+.++.
T Consensus 68 ~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s------~~~~~~a~~~~~~~~~--~~~v~~~~--~d~~~~~ 128 (235)
T 3lcc_A 68 GRALVPGCGGGH----DVVAMAS-----PERFVVGLDIS------ESALAKANETYGSSPK--AEYFSFVK--EDVFTWR 128 (235)
T ss_dssp EEEEEETCTTCH----HHHHHCB-----TTEEEEEECSC------HHHHHHHHHHHTTSGG--GGGEEEEC--CCTTTCC
T ss_pred CCEEEeCCCCCH----HHHHHHh-----CCCeEEEEECC------HHHHHHHHHHhhccCC--CcceEEEE--CchhcCC
Confidence 499999999983 3345554 24789999963 3445555444432111 11234432 2232222
Q ss_pred cccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHH-hhCCCEEEEE
Q 039114 442 LDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIK-RINPDLFVHG 493 (632)
Q Consensus 442 ~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir-~L~P~Vfv~~ 493 (632)
.. +.+=+|-|..-|+|+.++ -+..+|+.++ .|+|.-.++.
T Consensus 129 ~~------~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 129 PT------ELFDLIFDYVFFCAIEPE------MRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp CS------SCEEEEEEESSTTTSCGG------GHHHHHHHHHHHEEEEEEEEE
T ss_pred CC------CCeeEEEEChhhhcCCHH------HHHHHHHHHHHHCCCCcEEEE
Confidence 11 123344466778888643 2456666664 5899876554
No 43
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=83.10 E-value=13 Score=33.66 Aligned_cols=109 Identities=8% Similarity=0.106 Sum_probs=59.3
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-cE
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-PF 428 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-pF 428 (632)
+.|++.+...+.-+|+|+|-+.|. +...|+.+ + .++||||.. ...++.+.+++.. .++ ..
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~~~----~~~~~~ 82 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGR----NSLYLAAN-G----YDVDAWDKN------AMSIANVERIKSI----ENLDNL 82 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHHHH----HTCTTE
T ss_pred HHHHHHhhccCCCeEEEEcCCCCH----HHHHHHHC-C----CeEEEEECC------HHHHHHHHHHHHh----CCCCCc
Confidence 345555544344599999999885 34455555 2 389999963 3445554444432 344 34
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|... .++++. . .+.+=+|-|...|+|+.++ . ...+|+.+ +.|+|.-.+
T Consensus 83 ~~~~~--d~~~~~-----~-~~~~D~v~~~~~l~~~~~~-----~-~~~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 83 HTRVV--DLNNLT-----F-DRQYDFILSTVVLMFLEAK-----T-IPGLIANMQRCTKPGGYN 132 (199)
T ss_dssp EEEEC--CGGGCC-----C-CCCEEEEEEESCGGGSCGG-----G-HHHHHHHHHHTEEEEEEE
T ss_pred EEEEc--chhhCC-----C-CCCceEEEEcchhhhCCHH-----H-HHHHHHHHHHhcCCCeEE
Confidence 44332 232222 2 2333344455667777532 1 34566655 668998653
No 44
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=82.84 E-value=10 Score=36.18 Aligned_cols=108 Identities=17% Similarity=0.228 Sum_probs=59.3
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-...-+|+|+|-|.|.. ...|+.+.+ .++||||.. ...++.+.++ ++..|++ .
T Consensus 27 ~l~~~~~~~~~~~VLDiGcG~G~~----~~~la~~~~----~~v~gvD~s------~~~l~~a~~~----~~~~~~~~~v 88 (256)
T 1nkv_A 27 TLGRVLRMKPGTRILDLGSGSGEM----LCTWARDHG----ITGTGIDMS------SLFTAQAKRR----AEELGVSERV 88 (256)
T ss_dssp HHHHHTCCCTTCEEEEETCTTCHH----HHHHHHHTC----CEEEEEESC------HHHHHHHHHH----HHHTTCTTTE
T ss_pred HHHHhcCCCCCCEEEEECCCCCHH----HHHHHHhcC----CeEEEEeCC------HHHHHHHHHH----HHhcCCCcce
Confidence 344444434445899999999953 334443332 378999963 3345444433 3445654 5
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
+|... .++++. . .+.+=+|-|...++|+.+ + ..+|+.+ |-|+|.-.++
T Consensus 89 ~~~~~--d~~~~~-----~-~~~fD~V~~~~~~~~~~~-------~-~~~l~~~~r~LkpgG~l~ 137 (256)
T 1nkv_A 89 HFIHN--DAAGYV-----A-NEKCDVAACVGATWIAGG-------F-AGAEELLAQSLKPGGIML 137 (256)
T ss_dssp EEEES--CCTTCC-----C-SSCEEEEEEESCGGGTSS-------S-HHHHHHHTTSEEEEEEEE
T ss_pred EEEEC--ChHhCC-----c-CCCCCEEEECCChHhcCC-------H-HHHHHHHHHHcCCCeEEE
Confidence 65432 233322 1 233444556677788764 2 4556655 5679986443
No 45
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=82.41 E-value=3.4 Score=42.95 Aligned_cols=103 Identities=13% Similarity=0.108 Sum_probs=56.4
Q ss_pred HHHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcE
Q 039114 350 RMIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPF 428 (632)
Q Consensus 350 qaILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpF 428 (632)
..|++.+. -...-+|+|+|-+.|. +...|+.+- |.+++|++|.|. .++. |+.. -..
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~~-------~~~~--------a~~~-~~v 246 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGA----TVAAIAAHY---PTIKGVNFDLPH-------VISE--------APQF-PGV 246 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECHH-------HHTT--------CCCC-TTE
T ss_pred HHHHHhcccccCCCEEEEeCCCCCH----HHHHHHHHC---CCCeEEEecCHH-------HHHh--------hhhc-CCe
Confidence 45666665 3455799999999994 334444332 567999999741 1221 2221 124
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|..- .+.+ .+ ..+.+++ +.+-||++.|+. ...+|+.+ +.|+|.-.+
T Consensus 247 ~~~~~--D~~~----~~--p~~D~v~--~~~vlh~~~d~~------~~~~L~~~~~~L~pgG~l 294 (364)
T 3p9c_A 247 THVGG--DMFK----EV--PSGDTIL--MKWILHDWSDQH------CATLLKNCYDALPAHGKV 294 (364)
T ss_dssp EEEEC--CTTT----CC--CCCSEEE--EESCGGGSCHHH------HHHHHHHHHHHSCTTCEE
T ss_pred EEEeC--CcCC----CC--CCCCEEE--ehHHhccCCHHH------HHHHHHHHHHHcCCCCEE
Confidence 44332 2221 11 1233433 455688887642 24677777 458997533
No 46
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=82.21 E-value=20 Score=34.03 Aligned_cols=102 Identities=15% Similarity=0.175 Sum_probs=56.0
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccc
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWE 438 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E 438 (632)
.+.-+|+|+|-|.|.- ...|+.+ + .++||||.. ...++.+.+++ ....-.++|... .++
T Consensus 38 ~~~~~vLDiG~G~G~~----~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~----~~~~~~~~~~~~--d~~ 96 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRI----ALPLIAR-G----YRYIALDAD------AAMLEVFRQKI----AGVDRKVQVVQA--DAR 96 (263)
T ss_dssp SSCCEEEEETCTTSTT----HHHHHTT-T----CEEEEEESC------HHHHHHHHHHT----TTSCTTEEEEES--CTT
T ss_pred CCCCEEEEeCCcCCHH----HHHHHHC-C----CEEEEEECC------HHHHHHHHHHh----hccCCceEEEEc--ccc
Confidence 3456899999999853 2344544 2 489999963 34455444443 222233454332 233
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEe
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGV 494 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e 494 (632)
++ .+..+.+=+|-|...|||+.| + ..+|+.+ +-|+|.-.++..
T Consensus 97 ~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 97 AI-----PLPDESVHGVIVVHLWHLVPD-------W-PKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SC-----CSCTTCEEEEEEESCGGGCTT-------H-HHHHHHHHHHEEEEEEEEEE
T ss_pred cC-----CCCCCCeeEEEECCchhhcCC-------H-HHHHHHHHHHCCCCcEEEEE
Confidence 22 233343445556677888864 2 3455554 668998655433
No 47
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=81.06 E-value=6.6 Score=40.80 Aligned_cols=45 Identities=20% Similarity=0.200 Sum_probs=30.6
Q ss_pred hHHHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 349 NRMIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 349 NqaILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
...|++.+. -...-+|+|+|-+.|. +...|+.+- |.+++|++|.|
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 236 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGA----VASMIVAKY---PSINAINFDLP 236 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCH----HHHHHHHhC---CCCEEEEEehH
Confidence 345666665 3445799999999994 344444432 56899999973
No 48
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=81.03 E-value=7.4 Score=40.20 Aligned_cols=103 Identities=15% Similarity=0.074 Sum_probs=56.4
Q ss_pred HHHHhccc-cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcE
Q 039114 350 RMIGKTTE-KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPF 428 (632)
Q Consensus 350 qaILeA~~-g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpF 428 (632)
..|++.+. -...-+|+|+|-+.|. +...|+.+- |.+++|++|.| ..++ .|+... ..
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---~~~~~~~~D~~-------~~~~--------~a~~~~-~v 254 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGR----NLELIISKY---PLIKGINFDLP-------QVIE--------NAPPLS-GI 254 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEECH-------HHHT--------TCCCCT-TE
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcH----HHHHHHHHC---CCCeEEEeChH-------HHHH--------hhhhcC-CC
Confidence 55666664 2345689999999994 344455442 46899999863 1121 222221 13
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+|..- .+.+ .+ ++ +=+|-|..-|||+.|+. ...+|+.+ +.|+|.-.+
T Consensus 255 ~~~~~--d~~~----~~---~~-~D~v~~~~~lh~~~d~~------~~~~l~~~~~~L~pgG~l 302 (372)
T 1fp1_D 255 EHVGG--DMFA----SV---PQ-GDAMILKAVCHNWSDEK------CIEFLSNCHKALSPNGKV 302 (372)
T ss_dssp EEEEC--CTTT----CC---CC-EEEEEEESSGGGSCHHH------HHHHHHHHHHHEEEEEEE
T ss_pred EEEeC--Cccc----CC---CC-CCEEEEecccccCCHHH------HHHHHHHHHHhcCCCCEE
Confidence 44322 2211 11 11 34455667788887531 23677766 557997543
No 49
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=80.70 E-value=45 Score=32.67 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=57.1
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccc
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWE 438 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E 438 (632)
.+...|+|+|-+.| .+...|+.+- |+..++||||.. ...++.+.+++ ...+...+|.. ..++
T Consensus 21 ~~~~~vLDiGcG~G----~~~~~l~~~~--~~~~~v~gvD~s------~~~~~~a~~~~----~~~~~~v~~~~--~d~~ 82 (284)
T 3gu3_A 21 TKPVHIVDYGCGYG----YLGLVLMPLL--PEGSKYTGIDSG------ETLLAEARELF----RLLPYDSEFLE--GDAT 82 (284)
T ss_dssp CSCCEEEEETCTTT----HHHHHHTTTS--CTTCEEEEEESC------HHHHHHHHHHH----HSSSSEEEEEE--SCTT
T ss_pred CCCCeEEEecCCCC----HHHHHHHHhC--CCCCEEEEEECC------HHHHHHHHHHH----HhcCCceEEEE--cchh
Confidence 45578999999999 3444555542 234799999963 23344443333 33444444433 2233
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
++. . ++.+=+|-|..-|+|+.| +...+-+..+-|+|.-.++
T Consensus 83 ~~~-----~-~~~fD~v~~~~~l~~~~~-------~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 83 EIE-----L-NDKYDIAICHAFLLHMTT-------PETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp TCC-----C-SSCEEEEEEESCGGGCSS-------HHHHHHHHHHTEEEEEEEE
T ss_pred hcC-----c-CCCeeEEEECChhhcCCC-------HHHHHHHHHHHcCCCCEEE
Confidence 222 1 233445556667788764 3333444456789986554
No 50
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=80.46 E-value=11 Score=36.93 Aligned_cols=109 Identities=9% Similarity=0.142 Sum_probs=62.2
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEY 430 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF 430 (632)
.+++.+...+.-+|+|+|-|.|. +...|+.+ | .++||||.. ...++.+.++ ++..|+..+|
T Consensus 111 ~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~--g---~~v~~vD~s------~~~~~~a~~~----~~~~~~~~~~ 171 (286)
T 3m70_A 111 DVVDAAKIISPCKVLDLGCGQGR----NSLYLSLL--G---YDVTSWDHN------ENSIAFLNET----KEKENLNIST 171 (286)
T ss_dssp HHHHHHHHSCSCEEEEESCTTCH----HHHHHHHT--T---CEEEEEESC------HHHHHHHHHH----HHHTTCCEEE
T ss_pred HHHHHhhccCCCcEEEECCCCCH----HHHHHHHC--C---CeEEEEECC------HHHHHHHHHH----HHHcCCceEE
Confidence 34444443456689999999994 44456655 2 389999963 3344444433 4445665555
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.. ..++++.. .+.+=+|-|..-|||+.++ -+..+|+.+ +.|+|.-+++
T Consensus 172 ~~--~d~~~~~~------~~~fD~i~~~~~~~~~~~~------~~~~~l~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 172 AL--YDINAANI------QENYDFIVSTVVFMFLNRE------RVPSIIKNMKEHTNVGGYNL 220 (286)
T ss_dssp EE--CCGGGCCC------CSCEEEEEECSSGGGSCGG------GHHHHHHHHHHTEEEEEEEE
T ss_pred EE--eccccccc------cCCccEEEEccchhhCCHH------HHHHHHHHHHHhcCCCcEEE
Confidence 43 22332221 2333344455577887543 245677766 5679986543
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=80.21 E-value=16 Score=32.53 Aligned_cols=100 Identities=14% Similarity=0.127 Sum_probs=55.3
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~ 431 (632)
+++.+.-.+.-.|+|+|.+.|. +...|+.+. . ++||||.. .+.++.+.++ .-..+|.
T Consensus 9 ~~~~~~~~~~~~vLDiG~G~G~----~~~~l~~~~----~-~v~~vD~s------~~~~~~a~~~--------~~~v~~~ 65 (170)
T 3i9f_A 9 YLPNIFEGKKGVIVDYGCGNGF----YCKYLLEFA----T-KLYCIDIN------VIALKEVKEK--------FDSVITL 65 (170)
T ss_dssp THHHHHSSCCEEEEEETCTTCT----THHHHHTTE----E-EEEEECSC------HHHHHHHHHH--------CTTSEEE
T ss_pred HHHhcCcCCCCeEEEECCCCCH----HHHHHHhhc----C-eEEEEeCC------HHHHHHHHHh--------CCCcEEE
Confidence 3444444556789999999985 344455442 3 99999863 2334444333 1122222
Q ss_pred eecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEE
Q 039114 432 AIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVH 492 (632)
Q Consensus 432 ~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~ 492 (632)
. .. +....+.+=+|-|..-++|+.+ + ..+|+. .+.|+|.-.++
T Consensus 66 ~--~d--------~~~~~~~~D~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~ 109 (170)
T 3i9f_A 66 S--DP--------KEIPDNSVDFILFANSFHDMDD-------K-QHVISEVKRILKDDGRVI 109 (170)
T ss_dssp S--SG--------GGSCTTCEEEEEEESCSTTCSC-------H-HHHHHHHHHHEEEEEEEE
T ss_pred e--CC--------CCCCCCceEEEEEccchhcccC-------H-HHHHHHHHHhcCCCCEEE
Confidence 1 11 3333344445556677888853 3 345554 46789976544
No 52
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=79.85 E-value=9 Score=39.20 Aligned_cols=44 Identities=11% Similarity=0.137 Sum_probs=30.8
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
..|++.+.-...-+|+|+|-+.|. +...|+.+- |.+++|++|.|
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 217 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGG----FLLTVLREH---PGLQGVLLDRA 217 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSH----HHHHHHHHC---TTEEEEEEECH
T ss_pred HHHHHhCCccCCceEEEECCccCH----HHHHHHHHC---CCCEEEEecCH
Confidence 456676654567899999999994 334444432 56899999974
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=79.75 E-value=16 Score=36.19 Aligned_cols=113 Identities=12% Similarity=0.206 Sum_probs=61.6
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--E
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--F 428 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--F 428 (632)
.|++.+.-...-+|+|+|.|.|. +...|+.+.| .++|||+.. .+.++.+.+++ +..|++ .
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~----~~~~la~~~~----~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~v 124 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGS----TMRHAVAEYD----VNVIGLTLS------ENQYAHDKAMF----DEVDSPRRK 124 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSH----HHHHHHHHHC----CEEEEEECC------HHHHHHHHHHH----HHSCCSSCE
T ss_pred HHHHHcCCCCcCEEEEeeccCcH----HHHHHHHhCC----CEEEEEECC------HHHHHHHHHHH----HhcCCCCce
Confidence 35555544556689999998874 4444554422 589999963 34455544443 445665 4
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCccc-ccchHHHHHHHH-HhhCCCEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQV-KDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~-~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+| +...++++ .+.+=+|-|...|+|++|.... ...-...+|+.+ +-|+|.-.+
T Consensus 125 ~~--~~~d~~~~--------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l 179 (302)
T 3hem_A 125 EV--RIQGWEEF--------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRM 179 (302)
T ss_dssp EE--EECCGGGC--------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEE
T ss_pred EE--EECCHHHc--------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEE
Confidence 44 33333333 2222233345678888764110 001234666655 568998544
No 54
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=79.56 E-value=3.6 Score=39.30 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=48.5
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|.+.|. +...|+.+ | .++|||+.. .+.++ .|+.. ++|... ..++.
T Consensus 42 ~~~vLDiGcG~G~----~~~~l~~~--~---~~v~gvD~s------~~~~~--------~a~~~---~~~~~~--d~~~~ 93 (240)
T 3dli_A 42 CRRVLDIGCGRGE----FLELCKEE--G---IESIGVDIN------EDMIK--------FCEGK---FNVVKS--DAIEY 93 (240)
T ss_dssp CSCEEEETCTTTH----HHHHHHHH--T---CCEEEECSC------HHHHH--------HHHTT---SEEECS--CHHHH
T ss_pred CCeEEEEeCCCCH----HHHHHHhC--C---CcEEEEECC------HHHHH--------HHHhh---cceeec--cHHHH
Confidence 3579999999884 34455554 2 268999863 23333 33332 333221 22111
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLF 490 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vf 490 (632)
. . .+..+.+=+|-|...|+|+.++. ...+|+.+ +-|+|.-.
T Consensus 94 ~-~--~~~~~~fD~i~~~~~l~~~~~~~------~~~~l~~~~~~LkpgG~ 135 (240)
T 3dli_A 94 L-K--SLPDKYLDGVMISHFVEHLDPER------LFELLSLCYSKMKYSSY 135 (240)
T ss_dssp H-H--TSCTTCBSEEEEESCGGGSCGGG------HHHHHHHHHHHBCTTCC
T ss_pred h-h--hcCCCCeeEEEECCchhhCCcHH------HHHHHHHHHHHcCCCcE
Confidence 0 0 12223233444567788886431 34566665 66899743
No 55
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=79.40 E-value=4.2 Score=42.58 Aligned_cols=108 Identities=17% Similarity=0.210 Sum_probs=61.8
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEY 430 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF 430 (632)
.|++.+.-...-.|+|+|-+.|. ++..|+.+ | .++||||.. .. ..+.|++.|++..-
T Consensus 98 ~l~~~~~~~~~~~VLDiGcG~G~----~~~~l~~~--g---~~v~gvD~s------~~--------~~~~a~~~~~~~~~ 154 (416)
T 4e2x_A 98 DFLATELTGPDPFIVEIGCNDGI----MLRTIQEA--G---VRHLGFEPS------SG--------VAAKAREKGIRVRT 154 (416)
T ss_dssp HHHHTTTCSSSCEEEEETCTTTT----THHHHHHT--T---CEEEEECCC------HH--------HHHHHHTTTCCEEC
T ss_pred HHHHHhCCCCCCEEEEecCCCCH----HHHHHHHc--C---CcEEEECCC------HH--------HHHHHHHcCCCcce
Confidence 34455544456689999999997 55566654 2 299999863 22 23455555776542
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
..+. .-..+.+....+.+=+|-|...|+|+.| | ..+|+.+ +-|+|.-+++.
T Consensus 155 ~~~~----~~~~~~l~~~~~~fD~I~~~~vl~h~~d-------~-~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 155 DFFE----KATADDVRRTEGPANVIYAANTLCHIPY-------V-QSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp SCCS----HHHHHHHHHHHCCEEEEEEESCGGGCTT-------H-HHHHHHHHHHEEEEEEEEE
T ss_pred eeec----hhhHhhcccCCCCEEEEEECChHHhcCC-------H-HHHHHHHHHHcCCCeEEEE
Confidence 1111 1111222222344556667788899864 3 4556655 56899865443
No 56
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=79.25 E-value=8 Score=38.31 Aligned_cols=110 Identities=13% Similarity=0.193 Sum_probs=60.0
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccc
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWE 438 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E 438 (632)
...-+|+|+|.|.|. +...|+.+- ++..++||||.. ...++.+.+++... ....-..+|.. ..++
T Consensus 35 ~~~~~vLDiGcG~G~----~~~~la~~~--~~~~~v~gvD~s------~~~~~~a~~~~~~~-~~~~~~v~~~~--~d~~ 99 (299)
T 3g5t_A 35 GERKLLVDVGCGPGT----ATLQMAQEL--KPFEQIIGSDLS------ATMIKTAEVIKEGS-PDTYKNVSFKI--SSSD 99 (299)
T ss_dssp SCCSEEEEETCTTTH----HHHHHHHHS--SCCSEEEEEESC------HHHHHHHHHHHHHC-C-CCTTEEEEE--CCTT
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhC--CCCCEEEEEeCC------HHHHHHHHHHHHhc-cCCCCceEEEE--cCHH
Confidence 356789999999983 334444321 144799999973 34455554444332 01123455543 2333
Q ss_pred ccCccc-ccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEE
Q 039114 439 TIKLDD-LKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVH 492 (632)
Q Consensus 439 ~l~~e~-L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~ 492 (632)
++...+ ..+..+.+=+|-|...|||+ + + ..+|+. .+.|+|.-.++
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~-------~-~~~l~~~~~~LkpgG~l~ 146 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-D-------F-EKFQRSAYANLRKDGTIA 146 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-C-------H-HHHHHHHHHHEEEEEEEE
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-C-------H-HHHHHHHHHhcCCCcEEE
Confidence 333221 11223556677777888888 3 2 345555 46689986543
No 57
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=79.13 E-value=12 Score=36.55 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=57.1
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeeccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKWE 438 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~E 438 (632)
..+|+|+|.|.|. +...|+.+ | .++||||.. .+.++.+.+++ +..|++ .+|.. ..++
T Consensus 69 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~v~~~~--~d~~ 127 (285)
T 4htf_A 69 KLRVLDAGGGEGQ----TAIKMAER-G----HQVILCDLS------AQMIDRAKQAA----EAKGVSDNMQFIH--CAAQ 127 (285)
T ss_dssp CCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHH----HC-CCGGGEEEEE--SCGG
T ss_pred CCEEEEeCCcchH----HHHHHHHC-C----CEEEEEECC------HHHHHHHHHHH----HhcCCCcceEEEE--cCHH
Confidence 5789999999993 45556655 2 489999963 33455444443 344654 44433 2233
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
++. ....+.+=+|-|...|+|+.+ |. .+|+.+ +-|+|.-.++.
T Consensus 128 ~~~----~~~~~~fD~v~~~~~l~~~~~-------~~-~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 128 DVA----SHLETPVDLILFHAVLEWVAD-------PR-SVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp GTG----GGCSSCEEEEEEESCGGGCSC-------HH-HHHHHHHHTEEEEEEEEE
T ss_pred Hhh----hhcCCCceEEEECchhhcccC-------HH-HHHHHHHHHcCCCeEEEE
Confidence 222 022344445556677888854 33 455554 66899865543
No 58
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=79.09 E-value=28 Score=32.27 Aligned_cols=101 Identities=18% Similarity=0.326 Sum_probs=56.0
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC------cEEEEeec
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV------PFEYSAIA 434 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV------pFeF~~Ia 434 (632)
.-+|+|+|-+.|. +...|+.+ + .++||||.. ...++.+. +.++..++ .++|..
T Consensus 31 ~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~----~~~~~~~~~~~~~~~~~~~~-- 89 (235)
T 3sm3_A 31 DDEILDIGCGSGK----ISLELASK-G----YSVTGIDIN------SEAIRLAE----TAARSPGLNQKTGGKAEFKV-- 89 (235)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHHHHH----HHTTCCSCCSSSSCEEEEEE--
T ss_pred CCeEEEECCCCCH----HHHHHHhC-C----CeEEEEECC------HHHHHHHH----HHHHhcCCccccCcceEEEE--
Confidence 3479999999984 44455555 2 489999963 23333332 33444455 234432
Q ss_pred ccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 435 QKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 435 ~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
...+. +....+.+=+|-|..-|+|+.+.. .+..+|+.+ +-|+|.-.++
T Consensus 90 ~d~~~-----~~~~~~~~D~v~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~ 138 (235)
T 3sm3_A 90 ENASS-----LSFHDSSFDFAVMQAFLTSVPDPK-----ERSRIIKEVFRVLKPGAYLY 138 (235)
T ss_dssp CCTTS-----CCSCTTCEEEEEEESCGGGCCCHH-----HHHHHHHHHHHHEEEEEEEE
T ss_pred ecccc-----cCCCCCceeEEEEcchhhcCCCHH-----HHHHHHHHHHHHcCCCeEEE
Confidence 22222 222234444555667788887531 133667666 5589986543
No 59
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=78.86 E-value=14 Score=34.39 Aligned_cols=108 Identities=15% Similarity=0.205 Sum_probs=61.1
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~ 431 (632)
|...+...+.-+|+|+|.+.|. +...|+.+ + -++||||.. ...++.+.+++.. .+ .++|.
T Consensus 43 l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~~--~---~~v~~vD~s------~~~~~~a~~~~~~----~~-~~~~~ 102 (216)
T 3ofk_A 43 LRLSLSSGAVSNGLEIGCAAGA----FTEKLAPH--C---KRLTVIDVM------PRAIGRACQRTKR----WS-HISWA 102 (216)
T ss_dssp HHHHTTTSSEEEEEEECCTTSH----HHHHHGGG--E---EEEEEEESC------HHHHHHHHHHTTT----CS-SEEEE
T ss_pred HHHHcccCCCCcEEEEcCCCCH----HHHHHHHc--C---CEEEEEECC------HHHHHHHHHhccc----CC-CeEEE
Confidence 3344555667899999999993 45556654 2 489999963 3445554444332 22 34443
Q ss_pred eecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 432 AIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 432 ~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
. ..++++. ..+.+=+|-|...|+|+.+.. ....+|+.+ +.|+|.-+++
T Consensus 103 ~--~d~~~~~------~~~~fD~v~~~~~l~~~~~~~-----~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 103 A--TDILQFS------TAELFDLIVVAEVLYYLEDMT-----QMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp E--CCTTTCC------CSCCEEEEEEESCGGGSSSHH-----HHHHHHHHHHHTEEEEEEEE
T ss_pred E--cchhhCC------CCCCccEEEEccHHHhCCCHH-----HHHHHHHHHHHHcCCCCEEE
Confidence 3 2233222 123344555667888887521 123455554 6689986554
No 60
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=78.54 E-value=7.7 Score=36.14 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=20.6
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
..-+|+|+|-+.|. +...|+ .++||||..
T Consensus 67 ~~~~vLDiG~G~G~----~~~~l~--------~~v~~~D~s 95 (215)
T 2zfu_A 67 ASLVVADFGCGDCR----LASSIR--------NPVHCFDLA 95 (215)
T ss_dssp TTSCEEEETCTTCH----HHHHCC--------SCEEEEESS
T ss_pred CCCeEEEECCcCCH----HHHHhh--------ccEEEEeCC
Confidence 34589999999985 233342 489999974
No 61
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=77.15 E-value=4 Score=40.07 Aligned_cols=122 Identities=14% Similarity=0.157 Sum_probs=62.4
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCC-CcEE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCN-VPFE 429 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~g-VpFe 429 (632)
.|++.+......+|+|+|-|.|. +...|+.+ |+ ++||||.. ...++.+.+++.+.....+ ..+.
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s------~~~l~~a~~~~~~~~~~~~~~~~~ 112 (293)
T 3thr_A 48 WLLGLLRQHGCHRVLDVACGTGV----DSIMLVEE--GF---SVTSVDAS------DKMLKYALKERWNRRKEPAFDKWV 112 (293)
T ss_dssp HHHHHHHHTTCCEEEETTCTTSH----HHHHHHHT--TC---EEEEEESC------HHHHHHHHHHHHHTTTSHHHHTCE
T ss_pred HHHHHhcccCCCEEEEecCCCCH----HHHHHHHC--CC---eEEEEECC------HHHHHHHHHhhhhcccccccceee
Confidence 34444444455789999999994 33445544 33 99999973 3445555554432211111 1223
Q ss_pred EEeecccccccCcccccCCCCceEEEEee-cccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCM-YRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~-~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
|.. ..+.++. +++ ...+.+=+|-|. ..|+|+.+-.... .-...+|+.+ +.|+|.-.++
T Consensus 113 ~~~--~d~~~~~-~~~-~~~~~fD~V~~~g~~l~~~~~~~~~~-~~~~~~l~~~~~~LkpgG~l~ 172 (293)
T 3thr_A 113 IEE--ANWLTLD-KDV-PAGDGFDAVICLGNSFAHLPDSKGDQ-SEHRLALKNIASMVRPGGLLV 172 (293)
T ss_dssp EEE--CCGGGHH-HHS-CCTTCEEEEEECTTCGGGSCCSSSSS-HHHHHHHHHHHHTEEEEEEEE
T ss_pred Eee--cChhhCc-ccc-ccCCCeEEEEEcChHHhhcCccccCH-HHHHHHHHHHHHHcCCCeEEE
Confidence 222 2222221 111 233445556666 6888887611000 1134566655 5689985443
No 62
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=76.74 E-value=5.8 Score=37.57 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=21.6
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
.-+|+|+|.+.|.- ...|+.+- ++..+||+|+.
T Consensus 59 ~~~vLdiG~G~G~~----~~~la~~~--~~~~~v~~vD~ 91 (221)
T 3u81_A 59 PSLVLELGAYCGYS----AVRMARLL--QPGARLLTMEI 91 (221)
T ss_dssp CSEEEEECCTTSHH----HHHHHTTS--CTTCEEEEEES
T ss_pred CCEEEEECCCCCHH----HHHHHHhC--CCCCEEEEEeC
Confidence 34799999999842 22344321 23469999996
No 63
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=75.85 E-value=45 Score=31.10 Aligned_cols=22 Identities=18% Similarity=0.137 Sum_probs=17.0
Q ss_pred ccchhhHHHHHHhCCCccccCC
Q 039114 560 PETYRQWQSRNLRAGFRQLPVD 581 (632)
Q Consensus 560 ~E~~~qWq~R~~rAGF~~lpLs 581 (632)
.-+...|...+.++||+.+.+.
T Consensus 165 ~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 165 FFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp CCCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHHHHHHHHCCCeEEEEe
Confidence 3466789999999999876553
No 64
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=75.24 E-value=9.5 Score=35.74 Aligned_cols=93 Identities=19% Similarity=0.185 Sum_probs=52.6
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIK 441 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~ 441 (632)
-+|+|+|-+.|. +...|+.+ |+ ++||||.. ...++.+.+++.. ..+|.. ...+++
T Consensus 44 ~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s------~~~~~~a~~~~~~-------~v~~~~--~d~~~~- 98 (250)
T 2p7i_A 44 GNLLELGSFKGD----FTSRLQEH--FN---DITCVEAS------EEAISHAQGRLKD-------GITYIH--SRFEDA- 98 (250)
T ss_dssp SCEEEESCTTSH----HHHHHTTT--CS---CEEEEESC------HHHHHHHHHHSCS-------CEEEEE--SCGGGC-
T ss_pred CcEEEECCCCCH----HHHHHHHh--CC---cEEEEeCC------HHHHHHHHHhhhC-------CeEEEE--ccHHHc-
Confidence 369999999884 45556654 33 69999963 2334433333221 334332 223322
Q ss_pred cccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHH--hhCCCEEEE
Q 039114 442 LDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIK--RINPDLFVH 492 (632)
Q Consensus 442 ~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir--~L~P~Vfv~ 492 (632)
...+.+=+|-|...|+|+.| | ..+|+.++ -|+|.-.++
T Consensus 99 -----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~~LkpgG~l~ 138 (250)
T 2p7i_A 99 -----QLPRRYDNIVLTHVLEHIDD-------P-VALLKRINDDWLAEGGRLF 138 (250)
T ss_dssp -----CCSSCEEEEEEESCGGGCSS-------H-HHHHHHHHHTTEEEEEEEE
T ss_pred -----CcCCcccEEEEhhHHHhhcC-------H-HHHHHHHHHHhcCCCCEEE
Confidence 12233445556778889864 3 46777766 579975443
No 65
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=74.87 E-value=4.8 Score=43.89 Aligned_cols=119 Identities=9% Similarity=0.058 Sum_probs=62.7
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHH---HHHHHhCCC
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRL---KKAAERCNV 426 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL---~~fA~~~gV 426 (632)
..|++.+.-...=+|+|+|-|.|. +.-.||.+.+ .-+++||+.. .+.++-+.+.+ .+.++.+|+
T Consensus 163 ~~il~~l~l~~gd~VLDLGCGtG~----l~l~lA~~~g---~~kVvGIDiS------~~~lelAr~n~e~frkr~~~~Gl 229 (438)
T 3uwp_A 163 AQMIDEIKMTDDDLFVDLGSGVGQ----VVLQVAAATN---CKHHYGVEKA------DIPAKYAETMDREFRKWMKWYGK 229 (438)
T ss_dssp HHHHHHHCCCTTCEEEEESCTTSH----HHHHHHHHCC---CSEEEEEECC------HHHHHHHHHHHHHHHHHHHHHTB
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCH----HHHHHHHHCC---CCEEEEEeCC------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 335555543444579999999982 3333443332 2389999973 22233333322 234566676
Q ss_pred c-EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEE
Q 039114 427 P-FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 427 p-FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
. -.+..+...+.++...+ .+..-.+|++|+.+ + . ...+..+....|.|+|.-.++
T Consensus 230 ~~~rVefi~GD~~~lp~~d-~~~~aDVVf~Nn~~-F----~-----pdl~~aL~Ei~RvLKPGGrIV 285 (438)
T 3uwp_A 230 KHAEYTLERGDFLSEEWRE-RIANTSVIFVNNFA-F----G-----PEVDHQLKERFANMKEGGRIV 285 (438)
T ss_dssp CCCEEEEEECCTTSHHHHH-HHHTCSEEEECCTT-C----C-----HHHHHHHHHHHTTSCTTCEEE
T ss_pred CCCCeEEEECcccCCcccc-ccCCccEEEEcccc-c----C-----chHHHHHHHHHHcCCCCcEEE
Confidence 2 23333433333333221 12233577788654 1 1 124556666678899987655
No 66
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=73.93 E-value=9.8 Score=33.85 Aligned_cols=100 Identities=11% Similarity=0.060 Sum_probs=53.8
Q ss_pred HhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEE
Q 039114 353 GKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYS 431 (632)
Q Consensus 353 LeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~ 431 (632)
++.+.-.+.-+|+|+|.+.|. +...|+. +..++||||.. ...++.+.+++ +..|++ .+|.
T Consensus 28 ~~~~~~~~~~~vLdiG~G~G~----~~~~l~~-----~~~~v~~vD~~------~~~~~~a~~~~----~~~~~~~~~~~ 88 (183)
T 2yxd_A 28 IGKLNLNKDDVVVDVGCGSGG----MTVEIAK-----RCKFVYAIDYL------DGAIEVTKQNL----AKFNIKNCQII 88 (183)
T ss_dssp HHHHCCCTTCEEEEESCCCSH----HHHHHHT-----TSSEEEEEECS------HHHHHHHHHHH----HHTTCCSEEEE
T ss_pred HHHcCCCCCCEEEEeCCCCCH----HHHHHHh-----cCCeEEEEeCC------HHHHHHHHHHH----HHcCCCcEEEE
Confidence 333333344589999999985 3444554 34799999963 33454444443 345553 4443
Q ss_pred eecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEE
Q 039114 432 AIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 432 ~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
...+.+ ...+ ..=++++.+.. . ....+|+.++++ |.-.++
T Consensus 89 --~~d~~~-~~~~---~~~D~i~~~~~-------~-------~~~~~l~~~~~~-~gG~l~ 128 (183)
T 2yxd_A 89 --KGRAED-VLDK---LEFNKAFIGGT-------K-------NIEKIIEILDKK-KINHIV 128 (183)
T ss_dssp --ESCHHH-HGGG---CCCSEEEECSC-------S-------CHHHHHHHHHHT-TCCEEE
T ss_pred --ECCccc-cccC---CCCcEEEECCc-------c-------cHHHHHHHHhhC-CCCEEE
Confidence 223322 1111 12234554433 1 236789999988 875443
No 67
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=72.60 E-value=30 Score=32.38 Aligned_cols=108 Identities=14% Similarity=0.334 Sum_probs=57.4
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEE
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFE 429 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFe 429 (632)
..|.+.+.....-+|+|+|-+.|. +...|+.+ |+ -++|||+.. ...++.+.+++.. - .++
T Consensus 33 ~~l~~~~~~~~~~~vLdiG~G~G~----~~~~l~~~--~~--~~v~~vD~s------~~~~~~a~~~~~~----~--~~~ 92 (243)
T 3bkw_A 33 PALRAMLPEVGGLRIVDLGCGFGW----FCRWAHEH--GA--SYVLGLDLS------EKMLARARAAGPD----T--GIT 92 (243)
T ss_dssp HHHHHHSCCCTTCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC------HHHHHHHHHTSCS----S--SEE
T ss_pred HHHHHhccccCCCEEEEEcCcCCH----HHHHHHHC--CC--CeEEEEcCC------HHHHHHHHHhccc----C--Cce
Confidence 456666654555689999999984 34455555 22 289999963 2334433322211 1 233
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
|.. ..++++ ....+.+=+|-|...|+|+.+ + ..+|+.+ +.|+|.-.++
T Consensus 93 ~~~--~d~~~~-----~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~ 141 (243)
T 3bkw_A 93 YER--ADLDKL-----HLPQDSFDLAYSSLALHYVED-------V-ARLFRTVHQALSPGGHFV 141 (243)
T ss_dssp EEE--CCGGGC-----CCCTTCEEEEEEESCGGGCSC-------H-HHHHHHHHHHEEEEEEEE
T ss_pred EEE--cChhhc-----cCCCCCceEEEEeccccccch-------H-HHHHHHHHHhcCcCcEEE
Confidence 332 222222 222333334445567888753 2 3555554 6689985443
No 68
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=72.37 E-value=2.9 Score=39.27 Aligned_cols=65 Identities=12% Similarity=0.222 Sum_probs=37.5
Q ss_pred hccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEE
Q 039114 354 KTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYS 431 (632)
Q Consensus 354 eA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~ 431 (632)
+.+.....-+|+|+|-|.|. +...|+.+. |..++||||.. .+.++...++..+-++..+++ ++|.
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s------~~~l~~~~~~a~~~~~~~~~~~v~~~ 86 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGK----HPYKVARQN---PSRLVVALDAD------KSRMEKISAKAAAKPAKGGLPNLLYL 86 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCH----HHHHHHHHC---TTEEEEEEESC------GGGGHHHHHHHTSCGGGTCCTTEEEE
T ss_pred HHhhccCCCEEEEecCCCCH----HHHHHHHHC---CCCEEEEEECC------HHHHHHHHHHHHHhhhhcCCCceEEE
Confidence 33334556789999999994 333344431 45799999974 233444444444344445653 5553
No 69
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=71.75 E-value=21 Score=37.20 Aligned_cols=111 Identities=16% Similarity=0.244 Sum_probs=60.4
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
++|++.....+.-.|+|+|-|.| .+...|+.+ |. -++||||.. + .++.+ .+.++..|++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG----~ls~~la~~--g~--~~V~gvD~s-~------~~~~a----~~~~~~~~~~~~ 113 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSG----ILAIWSAQA--GA--RKVYAVEAT-K------MADHA----RALVKANNLDHI 113 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTT----HHHHHHHHT--TC--SEEEEEESS-T------THHHH----HHHHHHTTCTTT
T ss_pred HHHHhccccCCCCEEEEeccCcC----HHHHHHHhc--CC--CEEEEEccH-H------HHHHH----HHHHHHcCCCCe
Confidence 34444444344568999999999 334445554 22 399999974 2 13332 2334455665
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.+| +...++++... ..=.+|+.+.+ .+.+..+ .-++.+|+.+ +-|+|.-+++
T Consensus 114 v~~--~~~d~~~~~~~----~~~D~Iv~~~~--~~~l~~e-----~~~~~~l~~~~~~LkpgG~li 166 (376)
T 3r0q_C 114 VEV--IEGSVEDISLP----EKVDVIISEWM--GYFLLRE-----SMFDSVISARDRWLKPTGVMY 166 (376)
T ss_dssp EEE--EESCGGGCCCS----SCEEEEEECCC--BTTBTTT-----CTHHHHHHHHHHHEEEEEEEE
T ss_pred EEE--EECchhhcCcC----CcceEEEEcCh--hhcccch-----HHHHHHHHHHHhhCCCCeEEE
Confidence 444 33444444322 12234444432 2333322 1256788887 7799997664
No 70
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=71.60 E-value=10 Score=38.84 Aligned_cols=147 Identities=13% Similarity=0.092 Sum_probs=77.3
Q ss_pred HHHHHHHhcCcchhhhHHHhhHHHHhcc----ccC-CeeEEEEccccccc--ccHHHHHHHhcCCCCCCeEEEeeecCCC
Q 039114 329 KAYIVYISASPFRKASNFLTNRMIGKTT----EKA-TKVHIIDFGISYGF--QWPCFIQRQSFRPGGPPKIRITGIELPE 401 (632)
Q Consensus 329 kAy~~f~~~~Pf~kfa~f~ANqaILeA~----~g~-~~VHIIDfgI~~G~--QWP~Liq~La~R~gGPP~LRITgI~~p~ 401 (632)
.+-..+.++.|-.+- ..-+|.+.|.-+ .++ .-=+|+|+|-+-|. .--.+.|.++ |..|||+||..
T Consensus 43 ~~~~~~~~~~P~~~~-~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~------P~arVv~VD~s- 114 (277)
T 3giw_A 43 EAGDAMSREWPALPV-HMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA------PESRVVYVDND- 114 (277)
T ss_dssp HHHHHHHHHCTTHHH-HHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC------TTCEEEEEECC-
T ss_pred HHHHHHHHhCCCHHH-HHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC------CCCEEEEEeCC-
Confidence 344556778887642 234677666543 222 22379999998643 2223334332 45799999962
Q ss_pred CCCCChHHHHHHHHHHHHHHHhCCCcEEEEeec-cccccc-Ccc--cccCCCCceEEEEeecccCCCCCCcccccchHHH
Q 039114 402 PGFRPAERVEETGHRLKKAAERCNVPFEYSAIA-QKWETI-KLD--DLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDA 477 (632)
Q Consensus 402 ~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia-~~~E~l-~~e--~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~ 477 (632)
...|+....+|... -.-..+|.... ..++.+ ... .=.++.++.++|-+..-||||.|+. .|...
T Consensus 115 -----p~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~----~p~~~ 182 (277)
T 3giw_A 115 -----PIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDED----DAVGI 182 (277)
T ss_dssp -----HHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGG----CHHHH
T ss_pred -----hHHHHHHHHHhccC---CCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchh----hHHHH
Confidence 34455554444321 01124443322 222211 000 0123445655666778899998752 24444
Q ss_pred HHHHHHhhCCCE-EEEEee
Q 039114 478 VLRLIKRINPDL-FVHGVA 495 (632)
Q Consensus 478 vL~~Ir~L~P~V-fv~~e~ 495 (632)
|=+..+.|+|.- |+++..
T Consensus 183 l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 183 VRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp HHHHHTTSCTTCEEEEEEE
T ss_pred HHHHHHhCCCCcEEEEEec
Confidence 445667789985 454443
No 71
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=70.83 E-value=14 Score=35.23 Aligned_cols=106 Identities=16% Similarity=0.149 Sum_probs=57.5
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEY 430 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF 430 (632)
.+++.+.....-+|+|+|-+.|.-...|.+.+ |..++||||.. ...++.+.++ .-..+|
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------~~~~v~~~D~s------~~~~~~a~~~--------~~~~~~ 82 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-------GVNVITGIDSD------DDMLEKAADR--------LPNTNF 82 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-------CTTSEEEEESC------HHHHHHHHHH--------STTSEE
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-------CCCEEEEEECC------HHHHHHHHHh--------CCCcEE
Confidence 34555544445689999999996544444443 23479999963 2334443333 112333
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
... .++++. ..+.+=+|-|...|||+.| + ..+|+.+ +-|+|.-.++.
T Consensus 83 ~~~--d~~~~~------~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 83 GKA--DLATWK------PAQKADLLYANAVFQWVPD-------H-LAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp EEC--CTTTCC------CSSCEEEEEEESCGGGSTT-------H-HHHHHHHGGGEEEEEEEEE
T ss_pred EEC--ChhhcC------ccCCcCEEEEeCchhhCCC-------H-HHHHHHHHHhcCCCeEEEE
Confidence 322 222222 1233334556677888753 2 4566655 67899865443
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=70.82 E-value=41 Score=34.01 Aligned_cols=108 Identities=11% Similarity=0.166 Sum_probs=59.8
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-------cEEEEee
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-------PFEYSAI 433 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-------pFeF~~I 433 (632)
.-+|+|+|.|.|. ++..++.+.+ -++||||.. .+.|+.+.++..+. ++ .++|...
T Consensus 49 ~~~VLDlGCG~G~----~l~~~~~~~~----~~v~GiD~S------~~~l~~A~~~~~~~----~~~~~~~~~~~~f~~~ 110 (302)
T 2vdw_A 49 KRKVLAIDFGNGA----DLEKYFYGEI----ALLVATDPD------ADAIARGNERYNKL----NSGIKTKYYKFDYIQE 110 (302)
T ss_dssp CCEEEETTCTTTT----THHHHHHTTC----SEEEEEESC------HHHHHHHHHHHHHH----CC----CCCEEEEEEC
T ss_pred CCeEEEEecCCcH----hHHHHHhcCC----CeEEEEECC------HHHHHHHHHHHHhc----cccccccccccchhhh
Confidence 4689999999984 2222333322 379999973 45677766655432 32 2455443
Q ss_pred cccccccCcccc--cCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 434 AQKWETIKLDDL--KIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 434 a~~~E~l~~e~L--~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
...-+.. .++| ....+..=+|.|++.||++.+.. .+..+|+.| |-|+|.-.++
T Consensus 111 d~~~d~~-~~~l~~~~~~~~FD~V~~~~~lhy~~~~~-----~~~~~l~~~~r~LkpGG~~i 166 (302)
T 2vdw_A 111 TIRSDTF-VSSVREVFYFGKFNIIDWQFAIHYSFHPR-----HYATVMNNLSELTASGGKVL 166 (302)
T ss_dssp CTTSSSH-HHHHHTTCCSSCEEEEEEESCGGGTCSTT-----THHHHHHHHHHHEEEEEEEE
T ss_pred hcccchh-hhhhhccccCCCeeEEEECchHHHhCCHH-----HHHHHHHHHHHHcCCCCEEE
Confidence 2100000 0111 11234566778999999875421 125677766 5689986544
No 73
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=70.49 E-value=4.6 Score=39.68 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=58.0
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIK 441 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~ 441 (632)
=+|+|+|-|.| +|--.++.. .|..+++++|.. ...++-+.++ |...|+...+.... +
T Consensus 51 ~~VLDlGCG~G----plAl~l~~~---~p~a~~~A~Di~------~~~leiar~~----~~~~g~~~~v~~~d-----~- 107 (200)
T 3fzg_A 51 SSILDFGCGFN----PLALYQWNE---NEKIIYHAYDID------RAEIAFLSSI----IGKLKTTIKYRFLN-----K- 107 (200)
T ss_dssp SEEEEETCTTH----HHHHHHHCS---SCCCEEEEECSC------HHHHHHHHHH----HHHSCCSSEEEEEC-----C-
T ss_pred CeEEEecCCCC----HHHHHHHhc---CCCCEEEEEeCC------HHHHHHHHHH----HHhcCCCccEEEec-----c-
Confidence 37899988877 343344433 356699999973 3344444443 56778875544421 1
Q ss_pred cccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEEee
Q 039114 442 LDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVA 495 (632)
Q Consensus 442 ~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~e~ 495 (632)
.+ ..-++.+=+|=..--||+| ++ .+..+.+.++.|+|..+++.=.
T Consensus 108 -~~-~~~~~~~DvVLa~k~LHlL-~~------~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 108 -ES-DVYKGTYDVVFLLKMLPVL-KQ------QDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp -HH-HHTTSEEEEEEEETCHHHH-HH------TTCCHHHHHHTCEEEEEEEEEE
T ss_pred -cc-cCCCCCcChhhHhhHHHhh-hh------hHHHHHHHHHHhCCCCEEEEeC
Confidence 10 1122222233333455666 43 2345778899999998877544
No 74
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=70.48 E-value=27 Score=34.76 Aligned_cols=112 Identities=14% Similarity=0.240 Sum_probs=58.3
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHh----CCCcEEEEeecc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAER----CNVPFEYSAIAQ 435 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~----~gVpFeF~~Ia~ 435 (632)
+..+|+|+|-+.|.- ...|+.++ ..++||||.. .+.++.+.+++...... ....++| +..
T Consensus 34 ~~~~VLDlGcG~G~~----~~~l~~~~----~~~v~gvD~s------~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~ 97 (313)
T 3bgv_A 34 RDITVLDLGCGKGGD----LLKWKKGR----INKLVCTDIA------DVSVKQCQQRYEDMKNRRDSEYIFSAEF--ITA 97 (313)
T ss_dssp -CCEEEEETCTTTTT----HHHHHHTT----CSEEEEEESC------HHHHHHHHHHHHHHHSSSCC-CCCEEEE--EEC
T ss_pred CCCEEEEECCCCcHH----HHHHHhcC----CCEEEEEeCC------HHHHHHHHHHHHHhhhcccccccceEEE--EEe
Confidence 456899999999863 33344332 3589999963 35566666665543211 1112333 333
Q ss_pred cccccCcc-cccCCCCceEEEEeecccCCC-CCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 436 KWETIKLD-DLKIDRDEVTVVTCMYRLNYL-PDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 436 ~~E~l~~e-~L~i~~~E~LaVN~~~~L~~L-~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.++++... .+.-..+.+=+|-|.+.||++ .+.. . ...+|+.+ +.|+|.-+++
T Consensus 98 D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~----~-~~~~l~~~~~~LkpgG~li 152 (313)
T 3bgv_A 98 DSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYE----Q-ADMMLRNACERLSPGGYFI 152 (313)
T ss_dssp CTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHH----H-HHHHHHHHHTTEEEEEEEE
T ss_pred cccccchhhhcccCCCCEEEEEEecchhhccCCHH----H-HHHHHHHHHHHhCCCcEEE
Confidence 33333210 111112234455566788877 2211 1 24666666 5589986544
No 75
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=70.28 E-value=22 Score=32.60 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=59.0
Q ss_pred hHHHHhcccc-CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-
Q 039114 349 NRMIGKTTEK-ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV- 426 (632)
Q Consensus 349 NqaILeA~~g-~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV- 426 (632)
...|++.+.. ...-+|+|+|.+.|. +...|+.+ | .++||||.. ...++ .|+..++
T Consensus 34 ~~~~~~~l~~~~~~~~vLdiG~G~G~----~~~~l~~~--~---~~v~~~D~s------~~~~~--------~a~~~~~~ 90 (218)
T 3ou2_A 34 APAALERLRAGNIRGDVLELASGTGY----WTRHLSGL--A---DRVTALDGS------AEMIA--------EAGRHGLD 90 (218)
T ss_dssp HHHHHHHHTTTTSCSEEEEESCTTSH----HHHHHHHH--S---SEEEEEESC------HHHHH--------HHGGGCCT
T ss_pred HHHHHHHHhcCCCCCeEEEECCCCCH----HHHHHHhc--C---CeEEEEeCC------HHHHH--------HHHhcCCC
Confidence 3445565542 333499999999985 34444444 2 489999963 22222 3333442
Q ss_pred cEEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 427 PFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 427 pFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
..+|.. ..+++ + ...+.+=+|-|...|+|+.++ -+..+|+.+ +-|+|.-.++
T Consensus 91 ~~~~~~--~d~~~-----~-~~~~~~D~v~~~~~l~~~~~~------~~~~~l~~~~~~L~pgG~l~ 143 (218)
T 3ou2_A 91 NVEFRQ--QDLFD-----W-TPDRQWDAVFFAHWLAHVPDD------RFEAFWESVRSAVAPGGVVE 143 (218)
T ss_dssp TEEEEE--CCTTS-----C-CCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEE
T ss_pred CeEEEe--ccccc-----C-CCCCceeEEEEechhhcCCHH------HHHHHHHHHHHHcCCCeEEE
Confidence 344433 22222 2 223444455567788888652 135666665 5689976543
No 76
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=70.01 E-value=32 Score=31.82 Aligned_cols=100 Identities=10% Similarity=0.101 Sum_probs=51.7
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|-|.|. +...|+.+ ++ ++||||.. .+.++.+.+++. ..+...+|... .+.++
T Consensus 39 ~~~vLDlG~G~G~----~~~~l~~~--~~---~v~~vD~s------~~~~~~a~~~~~----~~~~~~~~~~~--d~~~~ 97 (227)
T 1ve3_A 39 RGKVLDLACGVGG----FSFLLEDY--GF---EVVGVDIS------EDMIRKAREYAK----SRESNVEFIVG--DARKL 97 (227)
T ss_dssp CCEEEEETCTTSH----HHHHHHHT--TC---EEEEEESC------HHHHHHHHHHHH----HTTCCCEEEEC--CTTSC
T ss_pred CCeEEEEeccCCH----HHHHHHHc--CC---EEEEEECC------HHHHHHHHHHHH----hcCCCceEEEC--chhcC
Confidence 4589999999983 34455554 33 99999963 344555444433 23333444332 22222
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
. +.-..=.+|+.|..+.+++.. .+ ..+|+.+ +.|+|.-.++
T Consensus 98 ~---~~~~~~D~v~~~~~~~~~~~~-------~~-~~~l~~~~~~L~~gG~l~ 139 (227)
T 1ve3_A 98 S---FEDKTFDYVIFIDSIVHFEPL-------EL-NQVFKEVRRVLKPSGKFI 139 (227)
T ss_dssp C---SCTTCEEEEEEESCGGGCCHH-------HH-HHHHHHHHHHEEEEEEEE
T ss_pred C---CCCCcEEEEEEcCchHhCCHH-------HH-HHHHHHHHHHcCCCcEEE
Confidence 1 111112455555554454432 23 3455554 6689985443
No 77
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=69.22 E-value=24 Score=31.52 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=21.8
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
+.-+|+|+|-+.|. +...|+.+ + .++|||+.
T Consensus 46 ~~~~vLdiG~G~G~----~~~~l~~~-~----~~v~~~D~ 76 (195)
T 3cgg_A 46 RGAKILDAGCGQGR----IGGYLSKQ-G----HDVLGTDL 76 (195)
T ss_dssp TTCEEEEETCTTTH----HHHHHHHT-T----CEEEEEES
T ss_pred CCCeEEEECCCCCH----HHHHHHHC-C----CcEEEEcC
Confidence 34589999999884 34445544 2 38999986
No 78
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=69.13 E-value=34 Score=31.37 Aligned_cols=44 Identities=20% Similarity=0.311 Sum_probs=31.8
Q ss_pred hhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 348 TNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 348 ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
....|++.+.....-+|+|+|.+.| .+...|+.+ + .++||||..
T Consensus 40 ~~~~~~~~~~~~~~~~vLdiG~G~G----~~~~~l~~~-~----~~v~~vD~s 83 (227)
T 3e8s_A 40 TDQAILLAILGRQPERVLDLGCGEG----WLLRALADR-G----IEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHTCCSEEEEETCTTC----HHHHHHHTT-T----CEEEEEESC
T ss_pred ccHHHHHHhhcCCCCEEEEeCCCCC----HHHHHHHHC-C----CEEEEEcCC
Confidence 4456777776556689999999999 355666665 2 389999963
No 79
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=68.43 E-value=62 Score=30.14 Aligned_cols=125 Identities=15% Similarity=0.203 Sum_probs=64.5
Q ss_pred HHHHHHhcCcchhhhHHHhhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHH
Q 039114 330 AYIVYISASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAER 409 (632)
Q Consensus 330 Ay~~f~~~~Pf~kfa~f~ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~ 409 (632)
.|..+....++..+..+ |++.+... -.|+|+|-+.|. +...|+.+ .++||||.. ...
T Consensus 10 ~yd~~~~~~~~~~~~~~-----~~~~~~~~--~~vLdiG~G~G~----~~~~l~~~------~~v~~vD~s------~~~ 66 (243)
T 3d2l_A 10 VYDELMQDVPYPEWVAW-----VLEQVEPG--KRIADIGCGTGT----ATLLLADH------YEVTGVDLS------EEM 66 (243)
T ss_dssp HHHHHTTTCCHHHHHHH-----HHHHSCTT--CEEEEESCTTCH----HHHHHTTT------SEEEEEESC------HHH
T ss_pred HHHHhhhcccHHHHHHH-----HHHHcCCC--CeEEEecCCCCH----HHHHHhhC------CeEEEEECC------HHH
Confidence 34444444444443332 34444322 579999999984 44456654 589999963 344
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeecccccccCcccccCCCCceEEEEeec-ccCCCCCCcccccchHHHHHHHH-HhhCC
Q 039114 410 VEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMY-RLNYLPDDTQVKDSLRDAVLRLI-KRINP 487 (632)
Q Consensus 410 leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~-~L~~L~de~v~~~spRd~vL~~I-r~L~P 487 (632)
++.+.+++. ..+...+|... .+.++. .. +.+=+|-|.+ .++|+.+.. ....+|+.+ +-|+|
T Consensus 67 ~~~a~~~~~----~~~~~~~~~~~--d~~~~~-----~~-~~fD~v~~~~~~~~~~~~~~-----~~~~~l~~~~~~L~p 129 (243)
T 3d2l_A 67 LEIAQEKAM----ETNRHVDFWVQ--DMRELE-----LP-EPVDAITILCDSLNYLQTEA-----DVKQTFDSAARLLTD 129 (243)
T ss_dssp HHHHHHHHH----HTTCCCEEEEC--CGGGCC-----CS-SCEEEEEECTTGGGGCCSHH-----HHHHHHHHHHHHEEE
T ss_pred HHHHHHhhh----hcCCceEEEEc--ChhhcC-----CC-CCcCEEEEeCCchhhcCCHH-----HHHHHHHHHHHhcCC
Confidence 555544443 23444454332 222221 11 2232333444 677775321 134555555 56899
Q ss_pred CEEEEEe
Q 039114 488 DLFVHGV 494 (632)
Q Consensus 488 ~Vfv~~e 494 (632)
.-.++..
T Consensus 130 gG~l~~~ 136 (243)
T 3d2l_A 130 GGKLLFD 136 (243)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 8765543
No 80
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=68.06 E-value=24 Score=33.00 Aligned_cols=102 Identities=12% Similarity=0.201 Sum_probs=56.0
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWET 439 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~ 439 (632)
+.-+|+|+|-+.|. +...|+.+ | .++|||+.. ...++.+.+++. ..++..+|.. ..+++
T Consensus 37 ~~~~vLdiG~G~G~----~~~~l~~~--~---~~~~~~D~s------~~~~~~a~~~~~----~~~~~~~~~~--~d~~~ 95 (246)
T 1y8c_A 37 VFDDYLDLACGTGN----LTENLCPK--F---KNTWAVDLS------QEMLSEAENKFR----SQGLKPRLAC--QDISN 95 (246)
T ss_dssp CTTEEEEETCTTST----THHHHGGG--S---SEEEEECSC------HHHHHHHHHHHH----HTTCCCEEEC--CCGGG
T ss_pred CCCeEEEeCCCCCH----HHHHHHHC--C---CcEEEEECC------HHHHHHHHHHHh----hcCCCeEEEe--ccccc
Confidence 44689999999985 23345544 2 479999863 344555554443 3344444432 22322
Q ss_pred cCcccccCCCCceEEEEeec-ccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 440 IKLDDLKIDRDEVTVVTCMY-RLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~-~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
+. .. +..=+|-|.. .|+|+.+.. . ...+|+.+ +.|+|.-+++.
T Consensus 96 ~~-----~~-~~fD~v~~~~~~l~~~~~~~----~-~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 96 LN-----IN-RKFDLITCCLDSTNYIIDSD----D-LKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp CC-----CS-CCEEEEEECTTGGGGCCSHH----H-HHHHHHHHHTTEEEEEEEEE
T ss_pred CC-----cc-CCceEEEEcCccccccCCHH----H-HHHHHHHHHHhcCCCcEEEE
Confidence 22 22 3333444566 788885421 1 34566655 55799865543
No 81
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=67.97 E-value=24 Score=34.17 Aligned_cols=109 Identities=14% Similarity=0.063 Sum_probs=56.9
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEE
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEY 430 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF 430 (632)
.|++.+.....-+|+|+|.|.|. +...|+. |..++||||.. ...+ +.|+... ..+|
T Consensus 25 ~l~~~~~~~~~~~vLDiGcG~G~----~~~~l~~-----~~~~v~gvD~s------~~~~--------~~a~~~~-~~~~ 80 (261)
T 3ege_A 25 AIINLLNLPKGSVIADIGAGTGG----YSVALAN-----QGLFVYAVEPS------IVMR--------QQAVVHP-QVEW 80 (261)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSH----HHHHHHT-----TTCEEEEECSC------HHHH--------HSSCCCT-TEEE
T ss_pred HHHHHhCCCCCCEEEEEcCcccH----HHHHHHh-----CCCEEEEEeCC------HHHH--------HHHHhcc-CCEE
Confidence 34455544455689999999995 3344443 33699999963 1222 2333221 3344
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCE-EEEEeecCCC
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDL-FVHGVANGTY 499 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~V-fv~~e~n~~~ 499 (632)
. ...++++. ...+.+=+|-|.+.|+|+.| + ..+|+. .+-|+ .- +++.+.+...
T Consensus 81 ~--~~d~~~~~-----~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 81 F--TGYAENLA-----LPDKSVDGVISILAIHHFSH-------L-EKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp E--CCCTTSCC-----SCTTCBSEEEEESCGGGCSS-------H-HHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred E--ECchhhCC-----CCCCCEeEEEEcchHhhccC-------H-HHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 2 22333322 22233334555666888843 3 345554 46678 63 5555554433
No 82
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=66.39 E-value=20 Score=36.94 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=59.4
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
++|++.+...+.-+|+|+|-|.|. |...++.+. ..++|||+.. + .++.+.+ .++..|++
T Consensus 40 ~~i~~~l~~~~~~~VLDiGcGtG~----ls~~la~~g----~~~V~~vD~s-----~--~~~~a~~----~~~~~~l~~~ 100 (348)
T 2y1w_A 40 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQAG----ARKIYAVEAS-----T--MAQHAEV----LVKSNNLTDR 100 (348)
T ss_dssp HHHHHTGGGTTTCEEEEETCTTSH----HHHHHHHTT----CSEEEEEECS-----T--HHHHHHH----HHHHTTCTTT
T ss_pred HHHHhccccCCcCEEEEcCCCccH----HHHHHHhCC----CCEEEEECCH-----H--HHHHHHH----HHHHcCCCCc
Confidence 567777655555689999999884 445566542 2599999963 1 2332222 23344543
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
.+| +...++++... .+=.+|+.+ .-++|+..+. ..+.+...-+-|+|+-.++
T Consensus 101 v~~--~~~d~~~~~~~----~~~D~Ivs~--~~~~~~~~~~-----~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 101 IVV--IPGKVEEVSLP----EQVDIIISE--PMGYMLFNER-----MLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp EEE--EESCTTTCCCS----SCEEEEEEC--CCBTTBTTTS-----HHHHHHHGGGGEEEEEEEE
T ss_pred EEE--EEcchhhCCCC----CceeEEEEe--CchhcCChHH-----HHHHHHHHHhhcCCCeEEE
Confidence 443 33344443211 111233333 3355555432 2345555557789997665
No 83
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=65.11 E-value=36 Score=30.32 Aligned_cols=113 Identities=8% Similarity=0.013 Sum_probs=58.5
Q ss_pred hHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-
Q 039114 349 NRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP- 427 (632)
Q Consensus 349 NqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp- 427 (632)
.+.+++.+.-...-+|+|+|-+.|. +...|+.+ + .++||||.. ...++.+.+++ +..+++
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~----~~~~~~~~-~----~~v~~~D~~------~~~~~~a~~~~----~~~~~~~ 101 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGV----IGIALADE-V----KSTTMADIN------RRAIKLAKENI----KLNNLDN 101 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSH----HHHHHGGG-S----SEEEEEESC------HHHHHHHHHHH----HHTTCTT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCH----HHHHHHHc-C----CeEEEEECC------HHHHHHHHHHH----HHcCCCc
Confidence 3455666654456689999999883 34455555 2 489999963 23454444433 344555
Q ss_pred --EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEee
Q 039114 428 --FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVA 495 (632)
Q Consensus 428 --FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~ 495 (632)
++|... .+.+. +.-..=++|+.|..| |+-. .....+|+.+ +.|+|.-.++...
T Consensus 102 ~~~~~~~~--d~~~~----~~~~~~D~v~~~~~~--~~~~-------~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 102 YDIRVVHS--DLYEN----VKDRKYNKIITNPPI--RAGK-------EVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp SCEEEEEC--STTTT----CTTSCEEEEEECCCS--TTCH-------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cceEEEEC--chhcc----cccCCceEEEECCCc--ccch-------hHHHHHHHHHHHHcCCCCEEEEEE
Confidence 555332 22211 111112355554433 3211 1234555554 6689986554443
No 84
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=64.66 E-value=18 Score=33.39 Aligned_cols=105 Identities=22% Similarity=0.204 Sum_probs=57.3
Q ss_pred hHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcE
Q 039114 349 NRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPF 428 (632)
Q Consensus 349 NqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpF 428 (632)
...|++.+. ...-+|+|+|-+.| .+...|+.+ + .++||||.. ...+ +.|+....
T Consensus 22 ~~~l~~~~~-~~~~~vLdiG~G~G----~~~~~l~~~-~----~~~~~~D~~------~~~~--------~~~~~~~~-- 75 (230)
T 3cc8_A 22 NPNLLKHIK-KEWKEVLDIGCSSG----ALGAAIKEN-G----TRVSGIEAF------PEAA--------EQAKEKLD-- 75 (230)
T ss_dssp CHHHHTTCC-TTCSEEEEETCTTS----HHHHHHHTT-T----CEEEEEESS------HHHH--------HHHHTTSS--
T ss_pred HHHHHHHhc-cCCCcEEEeCCCCC----HHHHHHHhc-C----CeEEEEeCC------HHHH--------HHHHHhCC--
Confidence 345666665 45678999999988 355566666 2 589999963 2222 23333222
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
+| +...++++ .+.+..+.+=+|-|...|+|+.+ | ..+|+.+ +.|+|.-.++
T Consensus 76 ~~--~~~d~~~~---~~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~~gG~l~ 127 (230)
T 3cc8_A 76 HV--VLGDIETM---DMPYEEEQFDCVIFGDVLEHLFD-------P-WAVIEKVKPYIKQNGVIL 127 (230)
T ss_dssp EE--EESCTTTC---CCCSCTTCEEEEEEESCGGGSSC-------H-HHHHHHTGGGEEEEEEEE
T ss_pred cE--EEcchhhc---CCCCCCCccCEEEECChhhhcCC-------H-HHHHHHHHHHcCCCCEEE
Confidence 22 22222221 12222233334445667788754 3 3566665 5578985443
No 85
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=63.57 E-value=41 Score=30.68 Aligned_cols=101 Identities=11% Similarity=0.154 Sum_probs=52.9
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|-+.|.-...++ +. ++ .++||||.. ...++.+.+++.+ .+..++|.. ..+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~---~~-~~----~~v~~vD~s------~~~~~~a~~~~~~----~~~~~~~~~--~d~~~- 82 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIF---VE-DG----YKTYGIEIS------DLQLKKAENFSRE----NNFKLNISK--GDIRK- 82 (209)
T ss_dssp CSEEEEESCCSSSCTHHHH---HH-TT----CEEEEEECC------HHHHHHHHHHHHH----HTCCCCEEE--CCTTS-
T ss_pred CCEEEEECCCCCHHHHHHH---Hh-CC----CEEEEEECC------HHHHHHHHHHHHh----cCCceEEEE--Cchhh-
Confidence 3589999999886444333 22 22 489999963 3445555544433 233333322 22222
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFVH 492 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv~ 492 (632)
+....+.+=+|-|...++|+..+ . ...+|+. .+.|+|.-.++
T Consensus 83 ----~~~~~~~fD~v~~~~~l~~~~~~-----~-~~~~l~~~~~~LkpgG~l~ 125 (209)
T 2p8j_A 83 ----LPFKDESMSFVYSYGTIFHMRKN-----D-VKEAIDEIKRVLKPGGLAC 125 (209)
T ss_dssp ----CCSCTTCEEEEEECSCGGGSCHH-----H-HHHHHHHHHHHEEEEEEEE
T ss_pred ----CCCCCCceeEEEEcChHHhCCHH-----H-HHHHHHHHHHHcCCCcEEE
Confidence 22223333344455667777421 2 3445555 46689986544
No 86
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=63.00 E-value=47 Score=31.79 Aligned_cols=130 Identities=15% Similarity=0.270 Sum_probs=68.1
Q ss_pred HHHHHHHHHHh--cCcchhhhHHHhhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCC
Q 039114 326 DVLKAYIVYIS--ASPFRKASNFLTNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPG 403 (632)
Q Consensus 326 ~~lkAy~~f~~--~~Pf~kfa~f~ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~g 403 (632)
++-..|..++. ...|.+.+..... .|.... .+.-.|+|+|-|.|. +...|+.+ |+ ++||||..
T Consensus 17 ~~a~~yd~~~~~~~~~~~~~~~~~~~-~l~~~~--~~~~~vLDiGcG~G~----~~~~l~~~--~~---~v~gvD~s--- 81 (263)
T 3pfg_A 17 EIAELYDLVHQGKGKDYHREAADLAA-LVRRHS--PKAASLLDVACGTGM----HLRHLADS--FG---TVEGLELS--- 81 (263)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHH-HHHHHC--TTCCEEEEETCTTSH----HHHHHTTT--SS---EEEEEESC---
T ss_pred hHHHHHHHHhhcCCCCHHHHHHHHHH-HHHhhC--CCCCcEEEeCCcCCH----HHHHHHHc--CC---eEEEEECC---
Confidence 34455665554 2345454443332 222222 233579999999983 55566655 32 89999963
Q ss_pred CCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccCcccccCCCCceEEEEeec-ccCCCCCCcccccchHHHHHHHH
Q 039114 404 FRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMY-RLNYLPDDTQVKDSLRDAVLRLI 482 (632)
Q Consensus 404 frp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~-~L~~L~de~v~~~spRd~vL~~I 482 (632)
.+.++.+.+++. +| +|.. ..++++ .. ++.+=+|-|.+ .|+|+.+.. -...+|+.+
T Consensus 82 ---~~~~~~a~~~~~------~~--~~~~--~d~~~~-----~~-~~~fD~v~~~~~~l~~~~~~~-----~~~~~l~~~ 137 (263)
T 3pfg_A 82 ---ADMLAIARRRNP------DA--VLHH--GDMRDF-----SL-GRRFSAVTCMFSSIGHLAGQA-----ELDAALERF 137 (263)
T ss_dssp ---HHHHHHHHHHCT------TS--EEEE--CCTTTC-----CC-SCCEEEEEECTTGGGGSCHHH-----HHHHHHHHH
T ss_pred ---HHHHHHHHhhCC------CC--EEEE--CChHHC-----Cc-cCCcCEEEEcCchhhhcCCHH-----HHHHHHHHH
Confidence 234444433321 33 3322 222222 22 34444555666 888886421 134566655
Q ss_pred -HhhCCCEEEEEe
Q 039114 483 -KRINPDLFVHGV 494 (632)
Q Consensus 483 -r~L~P~Vfv~~e 494 (632)
+-|+|.-+++..
T Consensus 138 ~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 138 AAHVLPDGVVVVE 150 (263)
T ss_dssp HHTEEEEEEEEEC
T ss_pred HHhcCCCcEEEEE
Confidence 557998766543
No 87
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=62.68 E-value=25 Score=35.88 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=23.8
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
..-+|+|+|-+.|. +...|+.+- |.+++|++|.
T Consensus 188 ~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~ 220 (352)
T 1fp2_A 188 GLESIVDVGGGTGT----TAKIICETF---PKLKCIVFDR 220 (352)
T ss_dssp TCSEEEEETCTTSH----HHHHHHHHC---TTCEEEEEEC
T ss_pred cCceEEEeCCCccH----HHHHHHHHC---CCCeEEEeeC
Confidence 34689999999994 445555442 4579999996
No 88
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=61.62 E-value=26 Score=36.69 Aligned_cols=125 Identities=10% Similarity=0.046 Sum_probs=64.8
Q ss_pred hhHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 348 TNRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 348 ANqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
..+.+++.+.....-+|+|+|.|.|. +...|+.+. |..+|||||.. ...++.+.+++...--.-.+.
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~----~s~~la~~~---p~~~V~gvD~s------~~al~~Ar~n~~~ngl~~~~~ 276 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGV----IGLTLLDKN---PQAKVVFVDES------PMAVASSRLNVETNMPEALDR 276 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCH----HHHHHHHHC---TTCEEEEEESC------HHHHHHHHHHHHHHCGGGGGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchH----HHHHHHHHC---CCCEEEEEECc------HHHHHHHHHHHHHcCCCcCce
Confidence 44567888866655789999999993 333444432 45799999963 345555555544322111123
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeec
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVAN 496 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n 496 (632)
++|..- ...+ .+.-..=++|+.|-.|+-..-... .-...+|+.+ +.|+|.-.++.+.+
T Consensus 277 v~~~~~--D~~~----~~~~~~fD~Ii~nppfh~~~~~~~-----~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 277 CEFMIN--NALS----GVEPFRFNAVLCNPPFHQQHALTD-----NVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEEEEC--STTT----TCCTTCEEEEEECCCC-------C-----CHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEec--hhhc----cCCCCCeeEEEECCCcccCcccCH-----HHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 555432 2211 111112246666766533221211 1223566665 45899977665544
No 89
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=61.02 E-value=42 Score=34.45 Aligned_cols=101 Identities=17% Similarity=0.218 Sum_probs=55.2
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeeccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKWE 438 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~E 438 (632)
.-.|+|+|-|.|. +...|+.+ +..+++|||.. +.++.+.+ .++..|++ .+|. ...++
T Consensus 67 ~~~VLDvGcG~G~----~~~~la~~----g~~~v~gvD~s-------~~l~~a~~----~~~~~~~~~~v~~~--~~d~~ 125 (349)
T 3q7e_A 67 DKVVLDVGSGTGI----LCMFAAKA----GARKVIGIECS-------SISDYAVK----IVKANKLDHVVTII--KGKVE 125 (349)
T ss_dssp TCEEEEESCTTSH----HHHHHHHT----TCSEEEEEECS-------THHHHHHH----HHHHTTCTTTEEEE--ESCTT
T ss_pred CCEEEEEeccchH----HHHHHHHC----CCCEEEEECcH-------HHHHHHHH----HHHHcCCCCcEEEE--ECcHH
Confidence 3479999999993 45556655 23699999973 12333333 34445665 4543 33444
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
++... -.+=++|+.+.+.. .+..+ ...+.+|..+ |-|+|.-+++
T Consensus 126 ~~~~~---~~~fD~Iis~~~~~--~l~~~-----~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 126 EVELP---VEKVDIIISEWMGY--CLFYE-----SMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp TCCCS---SSCEEEEEECCCBB--TBTBT-----CCHHHHHHHHHHHEEEEEEEE
T ss_pred HccCC---CCceEEEEEccccc--cccCc-----hhHHHHHHHHHHhCCCCCEEc
Confidence 44221 11123444444322 22222 1346788777 7799997765
No 90
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=60.79 E-value=74 Score=29.99 Aligned_cols=109 Identities=17% Similarity=0.256 Sum_probs=55.8
Q ss_pred HhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEe
Q 039114 353 GKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432 (632)
Q Consensus 353 LeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~ 432 (632)
++.....+.-+|+|+|.|.|. +...|+.+ | .++||||.. .+.++.+.+++. ..++..+|..
T Consensus 34 ~~~~~~~~~~~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s------~~~l~~a~~~~~----~~~~~v~~~~ 94 (252)
T 1wzn_A 34 FKEDAKREVRRVLDLACGTGI----PTLELAER-G----YEVVGLDLH------EEMLRVARRKAK----ERNLKIEFLQ 94 (252)
T ss_dssp HHHTCSSCCCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHHH----HTTCCCEEEE
T ss_pred HHHhcccCCCEEEEeCCCCCH----HHHHHHHC-C----CeEEEEECC------HHHHHHHHHHHH----hcCCceEEEE
Confidence 333333344689999999994 34445554 2 389999963 344555554443 3455555533
Q ss_pred ecccccccCcccccCCCCceEEEEeecc-cCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEe
Q 039114 433 IAQKWETIKLDDLKIDRDEVTVVTCMYR-LNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGV 494 (632)
Q Consensus 433 Ia~~~E~l~~e~L~i~~~E~LaVN~~~~-L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e 494 (632)
..+.++. .. +..=+|-|.+. ++++..+ ....+|+.+ +.|+|.-.++.+
T Consensus 95 --~d~~~~~-----~~-~~fD~v~~~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 95 --GDVLEIA-----FK-NEFDAVTMFFSTIMYFDEE------DLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp --SCGGGCC-----CC-SCEEEEEECSSGGGGSCHH------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CChhhcc-----cC-CCccEEEEcCCchhcCCHH------HHHHHHHHHHHHcCCCeEEEEe
Confidence 2233222 11 22223334332 2333211 234556555 668998765543
No 91
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=60.19 E-value=13 Score=37.47 Aligned_cols=41 Identities=17% Similarity=0.139 Sum_probs=28.3
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
..|++.+.-...-+|+|+|-|.|. +...|+.+ | -++||||.
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~----~a~~La~~-g----~~V~gvD~ 75 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRF----LIEKALER-G----ASVTVFDF 75 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHH----HHHHHHHT-T----CEEEEEES
T ss_pred HHHHHhcCCCCcCEEEEEeCcchH----HHHHHHhc-C----CEEEEEEC
Confidence 345566554555689999999885 44556655 2 38999996
No 92
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=57.76 E-value=62 Score=28.55 Aligned_cols=59 Identities=15% Similarity=0.081 Sum_probs=36.6
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
+++.+.-...-+|+|+|-+.| .+...|+.+- |..++||||.. .+.++.+.+++ +..|++
T Consensus 17 ~~~~~~~~~~~~vldiG~G~G----~~~~~l~~~~---~~~~v~~vD~~------~~~~~~a~~~~----~~~~~~ 75 (178)
T 3hm2_A 17 AISALAPKPHETLWDIGGGSG----SIAIEWLRST---PQTTAVCFEIS------EERRERILSNA----INLGVS 75 (178)
T ss_dssp HHHHHCCCTTEEEEEESTTTT----HHHHHHHTTS---SSEEEEEECSC------HHHHHHHHHHH----HTTTCT
T ss_pred HHHHhcccCCCeEEEeCCCCC----HHHHHHHHHC---CCCeEEEEeCC------HHHHHHHHHHH----HHhCCC
Confidence 444444455568999999988 3444555543 45899999963 34455544443 345665
No 93
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=56.68 E-value=46 Score=31.50 Aligned_cols=103 Identities=13% Similarity=0.148 Sum_probs=55.7
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWET 439 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~ 439 (632)
+.-.|+|+|.+.|. +...|+.+- ..++||||.. ...++.+.+++...- +...+|.. ..+++
T Consensus 79 ~~~~vLDiGcG~G~----~~~~l~~~~----~~~v~~vD~s------~~~~~~a~~~~~~~~---~~~~~~~~--~d~~~ 139 (241)
T 2ex4_A 79 GTSCALDCGAGIGR----ITKRLLLPL----FREVDMVDIT------EDFLVQAKTYLGEEG---KRVRNYFC--CGLQD 139 (241)
T ss_dssp CCSEEEEETCTTTH----HHHHTTTTT----CSEEEEEESC------HHHHHHHHHHTGGGG---GGEEEEEE--CCGGG
T ss_pred CCCEEEEECCCCCH----HHHHHHHhc----CCEEEEEeCC------HHHHHHHHHHhhhcC---CceEEEEE--cChhh
Confidence 35689999999884 444555542 2489999963 344555444433211 12234432 22333
Q ss_pred cCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
+. ...+.+=+|-|...|+|+.+. .+..+|+.+ +.|+|.-.++
T Consensus 140 ~~-----~~~~~fD~v~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~ 182 (241)
T 2ex4_A 140 FT-----PEPDSYDVIWIQWVIGHLTDQ------HLAEFLRRCKGSLRPNGIIV 182 (241)
T ss_dssp CC-----CCSSCEEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEE
T ss_pred cC-----CCCCCEEEEEEcchhhhCCHH------HHHHHHHHHHHhcCCCeEEE
Confidence 22 222333344455678888652 134566655 5689986544
No 94
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=56.58 E-value=54 Score=29.77 Aligned_cols=109 Identities=12% Similarity=0.129 Sum_probs=52.2
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC--cEEEEeecccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV--PFEYSAIAQKWET 439 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV--pFeF~~Ia~~~E~ 439 (632)
-.|+|+|.|.|. +...|+.+-+ |.-++||||.. .+.++.+.+++ +..|+ .++| +....++
T Consensus 24 ~~vLDlGcG~G~----~~~~l~~~~~--~~~~v~~vD~s------~~~~~~a~~~~----~~~~~~~~v~~--~~~d~~~ 85 (197)
T 3eey_A 24 DTVVDATCGNGN----DTAFLASLVG--ENGRVFGFDIQ------DKAIANTTKKL----TDLNLIDRVTL--IKDGHQN 85 (197)
T ss_dssp CEEEESCCTTSH----HHHHHHHHHC--TTCEEEEECSC------HHHHHHHHHHH----HHTTCGGGEEE--ECSCGGG
T ss_pred CEEEEcCCCCCH----HHHHHHHHhC--CCCEEEEEECC------HHHHHHHHHHH----HHcCCCCCeEE--EECCHHH
Confidence 479999999993 3333443311 22399999963 34455554443 34455 3444 3333333
Q ss_pred cCcccccCCCCceEEEEeecccCCCCCCccc--ccchHHHHHHHHHhhCCCEEEE
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQV--KDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~--~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
+.. .+. ..=++++.|..| +.. .+..+. ...+...+-...+-|+|.-.++
T Consensus 86 ~~~-~~~-~~fD~v~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~ 136 (197)
T 3eey_A 86 MDK-YID-CPVKAVMFNLGY-LPS-GDHSISTRPETTIQALSKAMELLVTGGIIT 136 (197)
T ss_dssp GGG-TCC-SCEEEEEEEESB-CTT-SCTTCBCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred Hhh-hcc-CCceEEEEcCCc-ccC-cccccccCcccHHHHHHHHHHhCcCCCEEE
Confidence 211 011 122466666555 211 111111 0122344444456689986544
No 95
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=55.84 E-value=20 Score=35.40 Aligned_cols=111 Identities=13% Similarity=0.135 Sum_probs=56.5
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~ 431 (632)
+++.+..... .|+|+|.+.|. +...|+.+ | .++||||.. ...++.+.+++.+....+...++|.
T Consensus 75 ~~~~~~~~~~-~vLDlGcG~G~----~~~~l~~~-~----~~v~gvD~s------~~~~~~a~~~~~~~~~~~~~~v~~~ 138 (299)
T 3g2m_A 75 FATRTGPVSG-PVLELAAGMGR----LTFPFLDL-G----WEVTALELS------TSVLAAFRKRLAEAPADVRDRCTLV 138 (299)
T ss_dssp HHHHHCCCCS-CEEEETCTTTT----THHHHHTT-T----CCEEEEESC------HHHHHHHHHHHHTSCHHHHTTEEEE
T ss_pred HHHhhCCCCC-cEEEEeccCCH----HHHHHHHc-C----CeEEEEECC------HHHHHHHHHHHhhcccccccceEEE
Confidence 3444433333 89999999996 44455555 2 479999973 3445555555443211111234443
Q ss_pred eecccccccCcccccCCCCceEEEEee-cccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 432 AIAQKWETIKLDDLKIDRDEVTVVTCM-YRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 432 ~Ia~~~E~l~~e~L~i~~~E~LaVN~~-~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
. ..++++. . ++.+=+|-|. ..++++.++ -+..+|+.+ +.|+|.-.++
T Consensus 139 ~--~d~~~~~-----~-~~~fD~v~~~~~~~~~~~~~------~~~~~l~~~~~~L~pgG~l~ 187 (299)
T 3g2m_A 139 Q--GDMSAFA-----L-DKRFGTVVISSGSINELDEA------DRRGLYASVREHLEPGGKFL 187 (299)
T ss_dssp E--CBTTBCC-----C-SCCEEEEEECHHHHTTSCHH------HHHHHHHHHHHHEEEEEEEE
T ss_pred e--CchhcCC-----c-CCCcCEEEECCcccccCCHH------HHHHHHHHHHHHcCCCcEEE
Confidence 3 2233222 2 2333333333 345555321 145667766 5689986544
No 96
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=55.71 E-value=57 Score=29.89 Aligned_cols=97 Identities=18% Similarity=0.260 Sum_probs=51.0
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWET 439 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~ 439 (632)
+.-+|+|+|-+.|. +...| +. -++||||.. ...++.+.+++ -++ +|. ...+++
T Consensus 36 ~~~~vLdiG~G~G~----~~~~l----~~---~~v~~vD~s------~~~~~~a~~~~------~~~--~~~--~~d~~~ 88 (211)
T 2gs9_A 36 PGESLLEVGAGTGY----WLRRL----PY---PQKVGVEPS------EAMLAVGRRRA------PEA--TWV--RAWGEA 88 (211)
T ss_dssp CCSEEEEETCTTCH----HHHHC----CC---SEEEEECCC------HHHHHHHHHHC------TTS--EEE--CCCTTS
T ss_pred CCCeEEEECCCCCH----hHHhC----CC---CeEEEEeCC------HHHHHHHHHhC------CCc--EEE--Eccccc
Confidence 45589999999884 33333 11 289999863 23344443333 133 332 222222
Q ss_pred cCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHH-HHhhCCCEEE-EEeec
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRL-IKRINPDLFV-HGVAN 496 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~-Ir~L~P~Vfv-~~e~n 496 (632)
+....+.+=+|-|...|+|+.+ + ..+|+. .+-|+|.-.+ +.+.+
T Consensus 89 -----~~~~~~~fD~v~~~~~l~~~~~-------~-~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 89 -----LPFPGESFDVVLLFTTLEFVED-------V-ERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp -----CCSCSSCEEEEEEESCTTTCSC-------H-HHHHHHHHHHEEEEEEEEEEEEC
T ss_pred -----CCCCCCcEEEEEEcChhhhcCC-------H-HHHHHHHHHHcCCCCEEEEEecC
Confidence 2232333334445677888753 3 345555 4668998543 44443
No 97
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=55.02 E-value=1.2e+02 Score=27.71 Aligned_cols=98 Identities=11% Similarity=0.109 Sum_probs=52.4
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|-|.|. +...|+.+ |+ -++||||.. ...++.+.++ ++..|+..+|. ...++++
T Consensus 50 ~~~vlD~g~G~G~----~~~~l~~~--~~--~~v~~vD~~------~~~~~~a~~~----~~~~~~~~~~~--~~d~~~~ 109 (207)
T 1wy7_A 50 GKVVADLGAGTGV----LSYGALLL--GA--KEVICVEVD------KEAVDVLIEN----LGEFKGKFKVF--IGDVSEF 109 (207)
T ss_dssp TCEEEEETCTTCH----HHHHHHHT--TC--SEEEEEESC------HHHHHHHHHH----TGGGTTSEEEE--ESCGGGC
T ss_pred cCEEEEeeCCCCH----HHHHHHHc--CC--CEEEEEECC------HHHHHHHHHH----HHHcCCCEEEE--ECchHHc
Confidence 3589999999995 44455555 22 289999963 2344444333 34456644443 3333333
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
. ..=++|+.|..|.... .. ....+|+.+.++--.++++
T Consensus 110 ~------~~~D~v~~~~p~~~~~--~~------~~~~~l~~~~~~l~~~~~~ 147 (207)
T 1wy7_A 110 N------SRVDIVIMNPPFGSQR--KH------ADRPFLLKAFEISDVVYSI 147 (207)
T ss_dssp C------CCCSEEEECCCCSSSS--TT------TTHHHHHHHHHHCSEEEEE
T ss_pred C------CCCCEEEEcCCCcccc--CC------chHHHHHHHHHhcCcEEEE
Confidence 1 1235788887764432 11 2245666665555334433
No 98
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=54.58 E-value=1e+02 Score=30.32 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=52.6
Q ss_pred EEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccCc
Q 039114 363 HIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKL 442 (632)
Q Consensus 363 HIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~ 442 (632)
.|+|+|.|.|. +...|+.+ + -++||||+. ...++ .|++. -.++|.. ...|
T Consensus 42 ~vLDvGcGtG~----~~~~l~~~-~----~~v~gvD~s------~~ml~--------~a~~~-~~v~~~~--~~~e---- 91 (257)
T 4hg2_A 42 DALDCGCGSGQ----ASLGLAEF-F----ERVHAVDPG------EAQIR--------QALRH-PRVTYAV--APAE---- 91 (257)
T ss_dssp EEEEESCTTTT----THHHHHTT-C----SEEEEEESC------HHHHH--------TCCCC-TTEEEEE--CCTT----
T ss_pred CEEEEcCCCCH----HHHHHHHh-C----CEEEEEeCc------HHhhh--------hhhhc-CCceeeh--hhhh----
Confidence 58999999994 33455544 2 379999963 22232 33332 1233322 2233
Q ss_pred ccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeec
Q 039114 443 DDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVAN 496 (632)
Q Consensus 443 e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n 496 (632)
++.+..+.+=+|-|...||++. .+.+|..+ |-|+|.-.+.....
T Consensus 92 -~~~~~~~sfD~v~~~~~~h~~~---------~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 92 -DTGLPPASVDVAIAAQAMHWFD---------LDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp -CCCCCSSCEEEEEECSCCTTCC---------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -hhcccCCcccEEEEeeehhHhh---------HHHHHHHHHHHcCCCCEEEEEEC
Confidence 3444445555666777787762 23566655 56899976544433
No 99
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=54.22 E-value=38 Score=34.71 Aligned_cols=111 Identities=17% Similarity=0.219 Sum_probs=58.4
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC--c
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV--P 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV--p 427 (632)
++|++.+.-.+.-+|+|+|-|.|. |...|+.+ | ..+++|||.. + .++.+.+++ +..|+ .
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~----ls~~la~~-g---~~~v~gvD~s-----~--~~~~a~~~~----~~~~~~~~ 114 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGI----LSMFAAKA-G---AKKVLGVDQS-----E--ILYQAMDII----RLNKLEDT 114 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSH----HHHHHHHT-T---CSEEEEEESS-----T--HHHHHHHHH----HHTTCTTT
T ss_pred HHHHhhhhhcCCCEEEEeeccCcH----HHHHHHHc-C---CCEEEEEChH-----H--HHHHHHHHH----HHcCCCCc
Confidence 455565544444589999999994 44455655 2 2589999963 1 244443333 33344 2
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEee-cccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCM-YRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~-~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.+| +....+++... ..+=.+|+.+.+ +.+.+.. ..+.+|+.+ |-|+|.-.++
T Consensus 115 i~~--~~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~~--------~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 115 ITL--IKGKIEEVHLP---VEKVDVIISEWMGYFLLFES--------MLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEE--EESCTTTSCCS---CSCEEEEEECCCBTTBTTTC--------HHHHHHHHHHHHEEEEEEEE
T ss_pred EEE--EEeeHHHhcCC---CCcEEEEEEcCchhhccCHH--------HHHHHHHHHHhhcCCCcEEE
Confidence 343 33333333211 111235555542 3343321 245677766 6689987654
No 100
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=53.89 E-value=29 Score=35.46 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=27.4
Q ss_pred HHHhcc--ccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 351 MIGKTT--EKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 351 aILeA~--~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
.|++.+ .-...-+|+|+|-+.|. +...|+.+- |.+++|++|.|
T Consensus 182 ~~~~~~~~~~~~~~~vlDvG~G~G~----~~~~l~~~~---p~~~~~~~D~~ 226 (358)
T 1zg3_A 182 LVLQENKRVFEGLESLVDVGGGTGG----VTKLIHEIF---PHLKCTVFDQP 226 (358)
T ss_dssp HHHHHTHHHHHTCSEEEEETCTTSH----HHHHHHHHC---TTSEEEEEECH
T ss_pred HHHHhcchhccCCCEEEEECCCcCH----HHHHHHHHC---CCCeEEEeccH
Confidence 455554 11233589999999994 444455442 46899999863
No 101
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=52.86 E-value=66 Score=30.86 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=22.6
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
..-.|+|+|-+.|. +...|+.+ + .++||||.
T Consensus 54 ~~~~vLDiGcG~G~----~~~~l~~~-~----~~v~gvD~ 84 (260)
T 2avn_A 54 NPCRVLDLGGGTGK----WSLFLQER-G----FEVVLVDP 84 (260)
T ss_dssp SCCEEEEETCTTCH----HHHHHHTT-T----CEEEEEES
T ss_pred CCCeEEEeCCCcCH----HHHHHHHc-C----CeEEEEeC
Confidence 44589999999884 44456655 2 38999996
No 102
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=52.84 E-value=67 Score=28.81 Aligned_cols=43 Identities=12% Similarity=0.136 Sum_probs=28.3
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHH
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKK 419 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~ 419 (632)
-+|+|+|-|.|. +...|+.+ ..++||||.. .+.++.+.+++.+
T Consensus 24 ~~vLDiGcG~G~----~~~~la~~-----~~~v~~vD~s------~~~l~~a~~~~~~ 66 (185)
T 3mti_A 24 SIVVDATMGNGN----DTAFLAGL-----SKKVYAFDVQ------EQALGKTSQRLSD 66 (185)
T ss_dssp CEEEESCCTTSH----HHHHHHTT-----SSEEEEEESC------HHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCH----HHHHHHHh-----CCEEEEEECC------HHHHHHHHHHHHH
Confidence 379999999984 33346655 2589999963 3456655555443
No 103
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=52.75 E-value=11 Score=41.68 Aligned_cols=113 Identities=15% Similarity=0.230 Sum_probs=64.0
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCC-CcEEEEeeccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCN-VPFEYSAIAQKWE 438 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~g-VpFeF~~Ia~~~E 438 (632)
+-+.|+|.|-|-|+ |-..||.+ | -++||||.. ...|+ +.+ ..|..-| +..+|.... .|
T Consensus 66 ~~~~vLDvGCG~G~----~~~~la~~-g----a~V~giD~~------~~~i~-~a~---~~a~~~~~~~~~~~~~~--~~ 124 (569)
T 4azs_A 66 RPLNVLDLGCAQGF----FSLSLASK-G----ATIVGIDFQ------QENIN-VCR---ALAEENPDFAAEFRVGR--IE 124 (569)
T ss_dssp SCCEEEEETCTTSH----HHHHHHHT-T----CEEEEEESC------HHHHH-HHH---HHHHTSTTSEEEEEECC--HH
T ss_pred CCCeEEEECCCCcH----HHHHHHhC-C----CEEEEECCC------HHHHH-HHH---HHHHhcCCCceEEEECC--HH
Confidence 44789999999994 66778865 3 379999963 22333 333 2344444 566776543 23
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEEeecCCC
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVANGTY 499 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~e~n~~~ 499 (632)
++.. ...++..=||-|+--|+|+.|..... ..-.|++.|++ +|+.+++++..+.|
T Consensus 125 ~~~~---~~~~~~fD~v~~~e~~ehv~~~~~~~--~~~~~~~tl~~-~~~~~~~~~~~~e~ 179 (569)
T 4azs_A 125 EVIA---ALEEGEFDLAIGLSVFHHIVHLHGID--EVKRLLSRLAD-VTQAVILELAVKEE 179 (569)
T ss_dssp HHHH---HCCTTSCSEEEEESCHHHHHHHHCHH--HHHHHHHHHHH-HSSEEEEECCCTTS
T ss_pred HHhh---hccCCCccEEEECcchhcCCCHHHHH--HHHHHHHHhcc-ccceeeEEeccccc
Confidence 2211 12334455778888999997642111 11234444433 35667776665543
No 104
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=52.74 E-value=55 Score=29.74 Aligned_cols=106 Identities=8% Similarity=-0.012 Sum_probs=55.1
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-cEEEEeeccccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-PFEYSAIAQKWETI 440 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-pFeF~~Ia~~~E~l 440 (632)
-+|+|+|-+.|.- .+. ++.+. .-++||||.. .+.++.+.+++. ..++ ..+|. ...+.++
T Consensus 46 ~~vLDlgcG~G~~---~~~-~~~~~----~~~v~~vD~~------~~~~~~a~~~~~----~~~~~~v~~~--~~d~~~~ 105 (189)
T 3p9n_A 46 LAVLDLYAGSGAL---GLE-ALSRG----AASVLFVESD------QRSAAVIARNIE----ALGLSGATLR--RGAVAAV 105 (189)
T ss_dssp CEEEEETCTTCHH---HHH-HHHTT----CSEEEEEECC------HHHHHHHHHHHH----HHTCSCEEEE--ESCHHHH
T ss_pred CEEEEeCCCcCHH---HHH-HHHCC----CCeEEEEECC------HHHHHHHHHHHH----HcCCCceEEE--EccHHHH
Confidence 4799999999932 222 33332 3489999963 344555544443 3354 24443 2233222
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHh---hCCCEEEEEeecC
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKR---INPDLFVHGVANG 497 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~---L~P~Vfv~~e~n~ 497 (632)
.. .+.-..=++++.|..|. +.. .....+|..+++ |+|.-+++.+...
T Consensus 106 ~~-~~~~~~fD~i~~~~p~~--~~~-------~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 106 VA-AGTTSPVDLVLADPPYN--VDS-------ADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HH-HCCSSCCSEEEECCCTT--SCH-------HHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred Hh-hccCCCccEEEECCCCC--cch-------hhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 11 11112234677665533 221 123567777765 9999776665544
No 105
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=50.22 E-value=21 Score=36.21 Aligned_cols=100 Identities=10% Similarity=0.138 Sum_probs=61.1
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIK 441 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~ 441 (632)
-.|+|+|-|.|- | +++.+ |..+++|+|.. .. +-..+..++...|+++.|..... .
T Consensus 107 ~~VLDlGCG~gp----L--al~~~----~~~~y~a~DId------~~----~i~~ar~~~~~~g~~~~~~v~D~-----~ 161 (253)
T 3frh_A 107 RRVLDIACGLNP----L--ALYER----GIASVWGCDIH------QG----LGDVITPFAREKDWDFTFALQDV-----L 161 (253)
T ss_dssp SEEEEETCTTTH----H--HHHHT----TCSEEEEEESB------HH----HHHHHHHHHHHTTCEEEEEECCT-----T
T ss_pred CeEEEecCCccH----H--HHHhc----cCCeEEEEeCC------HH----HHHHHHHHHHhcCCCceEEEeec-----c
Confidence 389999998881 1 11112 67899999973 22 33445556777799998865431 1
Q ss_pred cccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEEee
Q 039114 442 LDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGVA 495 (632)
Q Consensus 442 ~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~e~ 495 (632)
...+. .+..++.++- -+|+|-++ .+...++.+..|+|..+++.-.
T Consensus 162 ~~~~~-~~~DvvLllk--~lh~LE~q------~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 162 CAPPA-EAGDLALIFK--LLPLLERE------QAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp TSCCC-CBCSEEEEES--CHHHHHHH------STTHHHHHHHHCBCSEEEEEEE
T ss_pred cCCCC-CCcchHHHHH--HHHHhhhh------chhhHHHHHHHhcCCCEEEEcC
Confidence 11121 1344555553 34555432 2456779999999998887655
No 106
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=50.04 E-value=71 Score=32.40 Aligned_cols=101 Identities=15% Similarity=0.243 Sum_probs=51.5
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeeccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKWE 438 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~E 438 (632)
.-+|+|+|-|.|. |...++.+ | .-+++|||.. + .++.+.++ ++..|+. .+| +...++
T Consensus 39 ~~~VLDiGcGtG~----ls~~la~~--g--~~~v~~vD~s-~------~~~~a~~~----~~~~~~~~~i~~--~~~d~~ 97 (328)
T 1g6q_1 39 DKIVLDVGCGTGI----LSMFAAKH--G--AKHVIGVDMS-S------IIEMAKEL----VELNGFSDKITL--LRGKLE 97 (328)
T ss_dssp TCEEEEETCTTSH----HHHHHHHT--C--CSEEEEEESS-T------HHHHHHHH----HHHTTCTTTEEE--EESCTT
T ss_pred CCEEEEecCccHH----HHHHHHHC--C--CCEEEEEChH-H------HHHHHHHH----HHHcCCCCCEEE--EECchh
Confidence 3489999999994 33445554 2 2489999973 2 23333333 3344543 443 333344
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
++... ..+=.+|+.+.+ .+.+..+. ..+.+|..+ +-|+|.-.++
T Consensus 98 ~~~~~---~~~~D~Ivs~~~--~~~l~~~~-----~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 98 DVHLP---FPKVDIIISEWM--GYFLLYES-----MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp TSCCS---SSCEEEEEECCC--BTTBSTTC-----CHHHHHHHHHHHEEEEEEEE
T ss_pred hccCC---CCcccEEEEeCc--hhhcccHH-----HHHHHHHHHHhhcCCCeEEE
Confidence 33211 111134444433 22232221 235677666 6789987664
No 107
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=47.35 E-value=28 Score=37.82 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=58.7
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-- 427 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-- 427 (632)
.+|++.+...+.-+|+|+|-|.|. +...|+.+ +..+||||+.. ..++.+ .+.++..|+.
T Consensus 148 ~~il~~l~~~~~~~VLDiGcGtG~----la~~la~~----~~~~V~gvD~s-------~~l~~A----~~~~~~~gl~~~ 208 (480)
T 3b3j_A 148 RAILQNHTDFKDKIVLDVGCGSGI----LSFFAAQA----GARKIYAVEAS-------TMAQHA----EVLVKSNNLTDR 208 (480)
T ss_dssp HHHHHTGGGTTTCEEEEESCSTTH----HHHHHHHT----TCSEEEEEECH-------HHHHHH----HHHHHHTTCTTT
T ss_pred HHHHHhhhhcCCCEEEEecCcccH----HHHHHHHc----CCCEEEEEEcH-------HHHHHH----HHHHHHcCCCCc
Confidence 456666654455689999999885 44456654 23699999962 223322 2334445653
Q ss_pred EEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEE
Q 039114 428 FEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVH 492 (632)
Q Consensus 428 FeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~ 492 (632)
.+| +...++++... .+=++|+.|.+ ++++.++ ...+.+....+-|+|+-.++
T Consensus 209 v~~--~~~d~~~~~~~----~~fD~Ivs~~~--~~~~~~e-----~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 209 IVV--IPGKVEEVSLP----EQVDIIISEPM--GYMLFNE-----RMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp EEE--EESCTTTCCCS----SCEEEEECCCC--HHHHTCH-----HHHHHHHHGGGGEEEEEEEE
T ss_pred EEE--EECchhhCccC----CCeEEEEEeCc--hHhcCcH-----HHHHHHHHHHHhcCCCCEEE
Confidence 444 33344443211 11134444433 2333332 12344554456789987665
No 108
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=47.11 E-value=14 Score=36.81 Aligned_cols=48 Identities=13% Similarity=0.346 Sum_probs=29.0
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHH
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKA 420 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~f 420 (632)
+.-.|+|+|-+.| .+...|+.+-+ ..+|||||.. ...++.+.+++..+
T Consensus 46 ~~~~VLDiGCG~G----~~~~~la~~~~---~~~v~gvDis------~~~i~~A~~~~~~~ 93 (292)
T 3g07_A 46 RGRDVLDLGCNVG----HLTLSIACKWG---PSRMVGLDID------SRLIHSARQNIRHY 93 (292)
T ss_dssp TTSEEEEESCTTC----HHHHHHHHHTC---CSEEEEEESC------HHHHHHHHHTC---
T ss_pred CCCcEEEeCCCCC----HHHHHHHHHcC---CCEEEEECCC------HHHHHHHHHHHHhh
Confidence 3457999999999 33444554432 2499999973 34566666655543
No 109
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=46.57 E-value=42 Score=32.83 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=27.8
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHH
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRL 417 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL 417 (632)
+.-+|+|+|.|.|. +..|+ +.+. + -+|||||.. ...++.+.+++
T Consensus 71 ~~~~vLDiGcG~G~-~~~l~---~~~~-~---~~v~gvD~s------~~~l~~a~~~~ 114 (289)
T 2g72_A 71 SGRTLIDIGSGPTV-YQLLS---ACSH-F---EDITMTDFL------EVNRQELGRWL 114 (289)
T ss_dssp CCSEEEEETCTTCC-GGGTT---GGGG-C---SEEEEECSC------HHHHHHHHHHH
T ss_pred CCCeEEEECCCcCh-HHHHh---hccC-C---CeEEEeCCC------HHHHHHHHHHH
Confidence 44589999999998 54332 2222 2 389999973 34566555554
No 110
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=46.18 E-value=62 Score=29.66 Aligned_cols=54 Identities=17% Similarity=0.055 Sum_probs=32.8
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHH
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLK 418 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~ 418 (632)
+++.+.-...-+|+|+|-|.|. +...|+.+ + |..++||||.. .+.++.+.+++.
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~G~----~~~~la~~--~-~~~~v~~vD~s------~~~~~~a~~~~~ 85 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGSAS----VSIEASNL--M-PNGRIFALERN------PQYLGFIRDNLK 85 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTTCH----HHHHHHHH--C-TTSEEEEEECC------HHHHHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEECCCCCH----HHHHHHHH--C-CCCEEEEEeCC------HHHHHHHHHHHH
Confidence 4455544455689999999885 23334433 1 45699999963 344555544443
No 111
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=45.51 E-value=22 Score=34.16 Aligned_cols=112 Identities=11% Similarity=0.149 Sum_probs=55.7
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEEeeccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYSAIAQKWE 438 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~~Ia~~~E 438 (632)
..=+|+|+|-|.| .+...|+.+. |..++||||...+ . +-+...+..+-++..|++ .+|. ....+
T Consensus 24 ~~~~vLDiGCG~G----~~~~~la~~~---~~~~v~GvD~s~~-----~-ml~~A~~A~~~~~~~~~~~v~~~--~~d~~ 88 (225)
T 3p2e_A 24 FDRVHIDLGTGDG----RNIYKLAIND---QNTFYIGIDPVKE-----N-LFDISKKIIKKPSKGGLSNVVFV--IAAAE 88 (225)
T ss_dssp CSEEEEEETCTTS----HHHHHHHHTC---TTEEEEEECSCCG-----G-GHHHHHHHTSCGGGTCCSSEEEE--CCBTT
T ss_pred CCCEEEEEeccCc----HHHHHHHHhC---CCCEEEEEeCCHH-----H-HHHHHHHHHHHHHHcCCCCeEEE--EcCHH
Confidence 3347999999988 4555666543 4589999997422 2 222222222233455665 5553 23344
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
++. ..+ .+-+..|.+.|...++. .... ..+ ..+|+.+ |-|+|.-.++.
T Consensus 89 ~l~-~~~---~d~v~~i~~~~~~~~~~-~~~~-~~~-~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 89 SLP-FEL---KNIADSISILFPWGTLL-EYVI-KPN-RDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp BCC-GGG---TTCEEEEEEESCCHHHH-HHHH-TTC-HHHHHHHHTTEEEEEEEEE
T ss_pred Hhh-hhc---cCeEEEEEEeCCCcHHh-hhhh-cch-HHHHHHHHHhcCCCcEEEE
Confidence 441 111 14455555544322210 0000 011 3456655 55899865543
No 112
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=44.19 E-value=1.3e+02 Score=27.51 Aligned_cols=104 Identities=11% Similarity=0.062 Sum_probs=54.6
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEY 430 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF 430 (632)
+++.+.-.+.-+|+|+|-+.|..-. .|+.+ + -++|||+.. .+.++.+.+++. ..|++ .+|
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~----~la~~-~----~~v~~vD~~------~~~~~~a~~~~~----~~~~~~v~~ 129 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTA----ILAHL-V----QHVCSVERI------KGLQWQARRRLK----NLDLHNVST 129 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHH----HHHHH-S----SEEEEEESC------HHHHHHHHHHHH----HTTCCSEEE
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHH----HHHHh-C----CEEEEEecC------HHHHHHHHHHHH----HcCCCceEE
Confidence 3444444555689999999885332 33333 2 489999963 344555555443 34554 444
Q ss_pred EeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEEe
Q 039114 431 SAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHGV 494 (632)
Q Consensus 431 ~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~e 494 (632)
.. ..+...... .+.+=+|-+...++++++ ...+.|+|.-.++..
T Consensus 130 ~~--~d~~~~~~~-----~~~~D~i~~~~~~~~~~~-------------~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 130 RH--GDGWQGWQA-----RAPFDAIIVTAAPPEIPT-------------ALMTQLDEGGILVLP 173 (210)
T ss_dssp EE--SCGGGCCGG-----GCCEEEEEESSBCSSCCT-------------HHHHTEEEEEEEEEE
T ss_pred EE--CCcccCCcc-----CCCccEEEEccchhhhhH-------------HHHHhcccCcEEEEE
Confidence 33 222221111 122223333345677764 246778898654433
No 113
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=43.20 E-value=98 Score=30.78 Aligned_cols=111 Identities=16% Similarity=0.090 Sum_probs=58.2
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeecccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKWET 439 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~E~ 439 (632)
-.|+|+|.|.|. +.-.|+.+ |..++||||.. .+.++.+.++ ++..|+. .+|.. ..+.+
T Consensus 125 ~~vLDlG~GsG~----~~~~la~~----~~~~v~~vDis------~~al~~A~~n----~~~~~l~~~v~~~~--~D~~~ 184 (284)
T 1nv8_A 125 KTVADIGTGSGA----IGVSVAKF----SDAIVFATDVS------SKAVEIARKN----AERHGVSDRFFVRK--GEFLE 184 (284)
T ss_dssp CEEEEESCTTSH----HHHHHHHH----SSCEEEEEESC------HHHHHHHHHH----HHHTTCTTSEEEEE--SSTTG
T ss_pred CEEEEEeCchhH----HHHHHHHC----CCCEEEEEECC------HHHHHHHHHH----HHHcCCCCceEEEE--Ccchh
Confidence 479999999994 33445544 35799999963 3445544443 4455664 55543 33332
Q ss_pred cCcccccCCCCceEEEEeecccC--CCCCCcccccch----------HHHHHHHH-HhhCCCEEEEEeec
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLN--YLPDDTQVKDSL----------RDAVLRLI-KRINPDLFVHGVAN 496 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~--~L~de~v~~~sp----------Rd~vL~~I-r~L~P~Vfv~~e~n 496 (632)
.-.. ...+-.+|+.|-.|.-. ++..+ +. ..| .+.+-+.+ +.++|.-.++.+..
T Consensus 185 ~~~~--~f~~~D~IvsnPPyi~~~~~l~~~-v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 185 PFKE--KFASIEMILSNPPYVKSSAHLPKD-VL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp GGGG--GTTTCCEEEECCCCBCGGGSCTTS-CC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred hccc--ccCCCCEEEEcCCCCCcccccChh-hc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 1111 11111578888554321 22221 11 122 23444455 67889876665543
No 114
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=42.77 E-value=1.3e+02 Score=27.08 Aligned_cols=28 Identities=21% Similarity=0.407 Sum_probs=21.5
Q ss_pred EEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 363 HIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 363 HIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
.|+|+|.|.| .+...|+.+- ++||||..
T Consensus 26 ~vLD~GcG~G----~~~~~l~~~~------~v~gvD~s 53 (170)
T 3q87_B 26 IVLDLGTSTG----VITEQLRKRN------TVVSTDLN 53 (170)
T ss_dssp EEEEETCTTC----HHHHHHTTTS------EEEEEESC
T ss_pred eEEEeccCcc----HHHHHHHhcC------cEEEEECC
Confidence 8999999999 3555566542 99999973
No 115
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=42.62 E-value=1.5e+02 Score=28.49 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=53.1
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETI 440 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l 440 (632)
.-+|+|+|-|.|.--.. |+.++ ..++||||.. ...++.+.+++ ...++.-..+.+...++++
T Consensus 65 ~~~vLDiGcG~G~~~~~----l~~~~----~~~v~gvD~s------~~~~~~a~~~~----~~~~~~~~v~~~~~d~~~~ 126 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLK----YERAG----IGEYYGVDIA------EVSINDARVRA----RNMKRRFKVFFRAQDSYGR 126 (298)
T ss_dssp TCEEEEETCTTTTTHHH----HHHHT----CSEEEEEESC------HHHHHHHHHHH----HTSCCSSEEEEEESCTTTS
T ss_pred CCeEEEECCCCCHHHHH----HHHCC----CCEEEEEECC------HHHHHHHHHHH----HhcCCCccEEEEECCcccc
Confidence 35899999999953222 44331 2489999963 34455544443 3445532233333333322
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
.. . ..+.+=+|-|.+.|||+... ...+ ..+|+.+ +-|+|.-.++
T Consensus 127 ~~---~-~~~~fD~v~~~~~l~~~~~~---~~~~-~~~l~~~~~~LkpgG~l~ 171 (298)
T 1ri5_A 127 HM---D-LGKEFDVISSQFSFHYAFST---SESL-DIAQRNIARHLRPGGYFI 171 (298)
T ss_dssp CC---C-CSSCEEEEEEESCGGGGGSS---HHHH-HHHHHHHHHTEEEEEEEE
T ss_pred cc---C-CCCCcCEEEECchhhhhcCC---HHHH-HHHHHHHHHhcCCCCEEE
Confidence 11 0 12333344455566764211 1123 3555555 6689986544
No 116
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=42.20 E-value=35 Score=27.86 Aligned_cols=37 Identities=27% Similarity=0.487 Sum_probs=26.0
Q ss_pred CCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEe
Q 039114 388 GPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSA 432 (632)
Q Consensus 388 GPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~ 432 (632)
.--.+||||| |...-.|....-...|+.|||...|..
T Consensus 40 ndleiritgv--------peqvrkelakeaerlakefnitvtyti 76 (85)
T 2kl8_A 40 NDLEIRITGV--------PEQVRKELAKEAERLAKEFNITVTYTI 76 (85)
T ss_dssp SCEEEEEESC--------CHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CeeEEEEecC--------hHHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence 3457999999 344445666666677889999887743
No 117
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=41.85 E-value=1.6e+02 Score=27.43 Aligned_cols=53 Identities=21% Similarity=0.292 Sum_probs=32.1
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEE
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEY 430 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF 430 (632)
.-.|+|+|.|.|. ++..||.+. |..++||||.. ...++.+.++ ++..|++ ++|
T Consensus 39 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~giD~s------~~~l~~a~~~----~~~~~~~nv~~ 92 (213)
T 2fca_A 39 NPIHIEVGTGKGQ----FISGMAKQN---PDINYIGIELF------KSVIVTAVQK----VKDSEAQNVKL 92 (213)
T ss_dssp CCEEEEECCTTSH----HHHHHHHHC---TTSEEEEECSC------HHHHHHHHHH----HHHSCCSSEEE
T ss_pred CceEEEEecCCCH----HHHHHHHHC---CCCCEEEEEec------hHHHHHHHHH----HHHcCCCCEEE
Confidence 4469999999994 333455442 44799999963 3445554444 3445654 454
No 118
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=40.85 E-value=58 Score=32.04 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=29.1
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
.|++++.-...-+|+|+|-|.|. |...|+.++ .-++|||+.
T Consensus 22 ~iv~~~~~~~~~~VLDiG~G~G~----lt~~L~~~~----~~~v~avEi 62 (249)
T 3ftd_A 22 KIAEELNIEEGNTVVEVGGGTGN----LTKVLLQHP----LKKLYVIEL 62 (249)
T ss_dssp HHHHHTTCCTTCEEEEEESCHHH----HHHHHTTSC----CSEEEEECC
T ss_pred HHHHhcCCCCcCEEEEEcCchHH----HHHHHHHcC----CCeEEEEEC
Confidence 34555544455689999999884 677788762 358999986
No 119
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=40.81 E-value=1.4e+02 Score=27.71 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=37.0
Q ss_pred HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EE
Q 039114 352 IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FE 429 (632)
Q Consensus 352 ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--Fe 429 (632)
+++.+.-...-.|+|+|-+.|. +...|+.+ + .++||||.. .+.++.+.+ .++..|++ ++
T Consensus 47 ~l~~l~~~~~~~vLDlGcG~G~----~~~~la~~-~----~~v~~vD~s------~~~~~~a~~----~~~~~g~~~~v~ 107 (204)
T 3njr_A 47 TLAALAPRRGELLWDIGGGSGS----VSVEWCLA-G----GRAITIEPR------ADRIENIQK----NIDTYGLSPRMR 107 (204)
T ss_dssp HHHHHCCCTTCEEEEETCTTCH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHH----HHHHTTCTTTEE
T ss_pred HHHhcCCCCCCEEEEecCCCCH----HHHHHHHc-C----CEEEEEeCC------HHHHHHHHH----HHHHcCCCCCEE
Confidence 4444443444579999999884 33445555 2 589999963 344444433 35566776 55
Q ss_pred EE
Q 039114 430 YS 431 (632)
Q Consensus 430 F~ 431 (632)
|.
T Consensus 108 ~~ 109 (204)
T 3njr_A 108 AV 109 (204)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 120
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=38.83 E-value=50 Score=33.17 Aligned_cols=100 Identities=14% Similarity=0.165 Sum_probs=55.5
Q ss_pred hcCcchhhhH-HHhhH----HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHH
Q 039114 336 SASPFRKASN-FLTNR----MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERV 410 (632)
Q Consensus 336 ~~~Pf~kfa~-f~ANq----aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~l 410 (632)
..-|=.++++ |..++ .|++++.-... +|+|+|-|.| .|-..|+.+. -++|||+.. .+.+
T Consensus 18 ~~~~~k~~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G----~lt~~L~~~~-----~~V~avEid------~~~~ 81 (271)
T 3fut_A 18 GLFADKRFGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLG----ALTRALLEAG-----AEVTAIEKD------LRLR 81 (271)
T ss_dssp TCCCSTTSSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTS----HHHHHHHHTT-----CCEEEEESC------GGGH
T ss_pred CCCccccCCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchH----HHHHHHHHcC-----CEEEEEECC------HHHH
Confidence 4556666665 44444 45555554556 9999999999 4666777662 379999973 2234
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeecccccccCcccccCCCCceEEEEeeccc
Q 039114 411 EETGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRL 461 (632)
Q Consensus 411 eeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L 461 (632)
+...+++. +-.+++ +......+...++ .....+|-|..|..
T Consensus 82 ~~l~~~~~------~~~v~v--i~~D~l~~~~~~~--~~~~~iv~NlPy~i 122 (271)
T 3fut_A 82 PVLEETLS------GLPVRL--VFQDALLYPWEEV--PQGSLLVANLPYHI 122 (271)
T ss_dssp HHHHHHTT------TSSEEE--EESCGGGSCGGGS--CTTEEEEEEECSSC
T ss_pred HHHHHhcC------CCCEEE--EECChhhCChhhc--cCccEEEecCcccc
Confidence 44433332 123333 3333333333332 12346777877654
No 121
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=38.16 E-value=56 Score=31.89 Aligned_cols=100 Identities=12% Similarity=0.108 Sum_probs=52.7
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEEeeccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYSAIAQKWE 438 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~~Ia~~~E 438 (632)
..-+|+|+|.|-|+---.|.+. . |..+||+||.. ...++.+. +.++.+|+. .+| +...++
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~---~----~~~~v~~vD~s------~~~~~~a~----~~~~~~~l~~v~~--~~~d~~ 140 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIV---R----PELELVLVDAT------RKKVAFVE----RAIEVLGLKGARA--LWGRAE 140 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHH---C----TTCEEEEEESC------HHHHHHHH----HHHHHHTCSSEEE--EECCHH
T ss_pred CCCEEEEEcCCCCHHHHHHHHH---C----CCCEEEEEECC------HHHHHHHH----HHHHHhCCCceEE--EECcHH
Confidence 4458999999999754333332 1 45799999963 23444433 344555664 444 334455
Q ss_pred ccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 439 TIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 439 ~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
++...+..-.+=++++.+.+ .+.+.++..+ +-|+|.-.++
T Consensus 141 ~~~~~~~~~~~fD~I~s~a~--------------~~~~~ll~~~~~~LkpgG~l~ 181 (249)
T 3g89_A 141 VLAREAGHREAYARAVARAV--------------APLCVLSELLLPFLEVGGAAV 181 (249)
T ss_dssp HHTTSTTTTTCEEEEEEESS--------------CCHHHHHHHHGGGEEEEEEEE
T ss_pred HhhcccccCCCceEEEECCc--------------CCHHHHHHHHHHHcCCCeEEE
Confidence 44322100011124443321 1345677766 5578887544
No 122
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=38.15 E-value=70 Score=29.75 Aligned_cols=103 Identities=13% Similarity=0.052 Sum_probs=52.7
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHH----------hCCCcEE
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAE----------RCNVPFE 429 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~----------~~gVpFe 429 (632)
+.-+|+|+|-|.|. +...|+.+ | .++||||.. ...++.+.++... +. --....+
T Consensus 22 ~~~~vLD~GCG~G~----~~~~la~~-g----~~V~gvD~S------~~~l~~a~~~~~~-~~~~~~~~~~~~~~~~~v~ 85 (203)
T 1pjz_A 22 PGARVLVPLCGKSQ----DMSWLSGQ-G----YHVVGAELS------EAAVERYFTERGE-QPHITSQGDFKVYAAPGIE 85 (203)
T ss_dssp TTCEEEETTTCCSH----HHHHHHHH-C----CEEEEEEEC------HHHHHHHHHHHCS-CSEEEEETTEEEEECSSSE
T ss_pred CCCEEEEeCCCCcH----hHHHHHHC-C----CeEEEEeCC------HHHHHHHHHHccC-CcccccccccccccCCccE
Confidence 34579999999993 33446654 3 489999973 3445554433210 00 0011223
Q ss_pred EEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEE
Q 039114 430 YSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLF 490 (632)
Q Consensus 430 F~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vf 490 (632)
|.. ..+.++...+ .+.+=+|-|...|+|+.++ -+..+|+.| |-|+|.-.
T Consensus 86 ~~~--~d~~~l~~~~----~~~fD~v~~~~~l~~l~~~------~~~~~l~~~~r~LkpgG~ 135 (203)
T 1pjz_A 86 IWC--GDFFALTARD----IGHCAAFYDRAAMIALPAD------MRERYVQHLEALMPQACS 135 (203)
T ss_dssp EEE--ECCSSSTHHH----HHSEEEEEEESCGGGSCHH------HHHHHHHHHHHHSCSEEE
T ss_pred EEE--CccccCCccc----CCCEEEEEECcchhhCCHH------HHHHHHHHHHHHcCCCcE
Confidence 322 1222222211 0223344455677877532 255677766 55999853
No 123
>2j66_A BTRK, decarboxylase; butirosin, AHBA biosynthesis, lyase; HET: PLP; 1.65A {Bacillus circulans}
Probab=36.69 E-value=1.3e+02 Score=31.61 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=42.6
Q ss_pred CeeEE-EEccc--------------cccc---ccHHHHHHHhcCCCCCCeEEEeeecCCC-CCCCChHHHHHHHHHHHHH
Q 039114 360 TKVHI-IDFGI--------------SYGF---QWPCFIQRQSFRPGGPPKIRITGIELPE-PGFRPAERVEETGHRLKKA 420 (632)
Q Consensus 360 ~~VHI-IDfgI--------------~~G~---QWP~Liq~La~R~gGPP~LRITgI~~p~-~gfrp~e~leeTGrRL~~f 420 (632)
-+||| ||-|+ .+|+ +++.+++.+... |.|+|.||..-- +.....+.+.++-+++.++
T Consensus 133 ~~V~lrvn~g~~~~~~~~~~~~~~srfG~~~~e~~~~~~~~~~~----~~l~l~Gl~~H~gs~~~~~~~~~~~~~~~~~~ 208 (428)
T 2j66_A 133 ARVAIRINPDKSFGSTAIKMGGVPRQFGMDESMLDAVMDAVRSL----QFTKFIGIHVYTGTQNLNTDSIIESMKYTVDL 208 (428)
T ss_dssp EEEEEEEECSSCC--CCCSSSCCCCSSSEEGGGHHHHHHHHHHC----TTEEEEEEECCCCSCBCCHHHHHHHHHHHHHH
T ss_pred ceEEEEEcCCCCCCCCccccCCCCCCCCCCHHHHHHHHHHHHhC----CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 46888 88875 5787 677788877754 459999997631 1112334455555666666
Q ss_pred HHh----CCCcEEEE
Q 039114 421 AER----CNVPFEYS 431 (632)
Q Consensus 421 A~~----~gVpFeF~ 431 (632)
+++ +|+++++-
T Consensus 209 ~~~l~~~~g~~~~~l 223 (428)
T 2j66_A 209 GRNIYERYGIVCECI 223 (428)
T ss_dssp HHHHHHHHCCCCSEE
T ss_pred HHHHHHHhCCCCCEE
Confidence 544 36665543
No 124
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=36.22 E-value=81 Score=33.31 Aligned_cols=100 Identities=14% Similarity=0.210 Sum_probs=51.9
Q ss_pred EEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccCc
Q 039114 363 HIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIKL 442 (632)
Q Consensus 363 HIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~ 442 (632)
+|+|+|-|.| ++-.+|.|.|. -+++||+.. + +.+..+++ ++.-|+.=....|..+.+++.+
T Consensus 86 ~VLDvG~GtG-----iLs~~Aa~aGA---~~V~ave~s-----~---~~~~a~~~---~~~n~~~~~i~~i~~~~~~~~l 146 (376)
T 4hc4_A 86 TVLDVGAGTG-----ILSIFCAQAGA---RRVYAVEAS-----A---IWQQAREV---VRFNGLEDRVHVLPGPVETVEL 146 (376)
T ss_dssp EEEEETCTTS-----HHHHHHHHTTC---SEEEEEECS-----T---THHHHHHH---HHHTTCTTTEEEEESCTTTCCC
T ss_pred EEEEeCCCcc-----HHHHHHHHhCC---CEEEEEeCh-----H---HHHHHHHH---HHHcCCCceEEEEeeeeeeecC
Confidence 5899999888 33445555543 378999853 1 12233333 3444554233345455555543
Q ss_pred ccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEE
Q 039114 443 DDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVH 492 (632)
Q Consensus 443 e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~ 492 (632)
. ..+=||-|-.--..|..|. ..+.||... |-|+|+-+++
T Consensus 147 p------e~~DvivsE~~~~~l~~e~-----~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 P------EQVDAIVSEWMGYGLLHES-----MLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp S------SCEEEEECCCCBTTBTTTC-----SHHHHHHHHHHHEEEEEEEE
T ss_pred C------ccccEEEeecccccccccc-----hhhhHHHHHHhhCCCCceEC
Confidence 2 1122222322223344443 356788877 5578887654
No 125
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=35.79 E-value=63 Score=30.06 Aligned_cols=102 Identities=13% Similarity=0.057 Sum_probs=52.8
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-cEEEEeeccccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-PFEYSAIAQKWETI 440 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-pFeF~~Ia~~~E~l 440 (632)
-+|+|+|-+.|.--. ..++ + |. -+|||||.. .+.++.+.+++ +..|+ ..+|. ...+++.
T Consensus 56 ~~vLDlgcG~G~~~~---~l~~-~--~~--~~V~~vD~s------~~~l~~a~~~~----~~~~~~~v~~~--~~D~~~~ 115 (202)
T 2fpo_A 56 AQCLDCFAGSGALGL---EALS-R--YA--AGATLIEMD------RAVSQQLIKNL----ATLKAGNARVV--NSNAMSF 115 (202)
T ss_dssp CEEEETTCTTCHHHH---HHHH-T--TC--SEEEEECSC------HHHHHHHHHHH----HHTTCCSEEEE--CSCHHHH
T ss_pred CeEEEeCCCcCHHHH---HHHh-c--CC--CEEEEEECC------HHHHHHHHHHH----HHcCCCcEEEE--ECCHHHH
Confidence 479999999984322 2222 3 21 289999963 34455554443 34455 34443 2222221
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHh---hCCCEEEEEeec
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKR---INPDLFVHGVAN 496 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~---L~P~Vfv~~e~n 496 (632)
... .-..=++|++|..|+. . ....+|+.+++ |+|.-+++.+.+
T Consensus 116 ~~~--~~~~fD~V~~~~p~~~---~--------~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 116 LAQ--KGTPHNIVFVDPPFRR---G--------LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HSS--CCCCEEEEEECCSSST---T--------THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred Hhh--cCCCCCEEEECCCCCC---C--------cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 110 0011136666655431 1 13567888876 999866554443
No 126
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=35.78 E-value=2e+02 Score=27.99 Aligned_cols=105 Identities=8% Similarity=-0.028 Sum_probs=55.2
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHH-H------H-H------hCC
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKK-A------A-E------RCN 425 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~-f------A-~------~~g 425 (632)
..-.|+|+|-|.|. ++..||.+ | .++||||.. ...|+.+.++... + + . ..+
T Consensus 68 ~~~~vLD~GCG~G~----~~~~La~~-G----~~V~gvD~S------~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (252)
T 2gb4_A 68 SGLRVFFPLCGKAI----EMKWFADR-G----HTVVGVEIS------EIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSS 132 (252)
T ss_dssp CSCEEEETTCTTCT----HHHHHHHT-T----CEEEEECSC------HHHHHHHHHHTTCCEEEEECTTSTTCEEEEETT
T ss_pred CCCeEEEeCCCCcH----HHHHHHHC-C----CeEEEEECC------HHHHHHHHHhcccccccccccccccccccccCC
Confidence 44689999999984 34557765 3 389999973 3344443222110 0 0 0 001
Q ss_pred CcEEEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 426 VPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 426 VpFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
...+|.. ..+.++...+ .+.+=+|-+...|++|.++ .+..+++.| +-|+|.-.+
T Consensus 133 ~~i~~~~--~D~~~l~~~~----~~~FD~V~~~~~l~~l~~~------~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 133 GSISLYC--CSIFDLPRAN----IGKFDRIWDRGALVAINPG------DHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp SSEEEEE--SCTTTGGGGC----CCCEEEEEESSSTTTSCGG------GHHHHHHHHHHTEEEEEEE
T ss_pred CceEEEE--CccccCCccc----CCCEEEEEEhhhhhhCCHH------HHHHHHHHHHHHcCCCeEE
Confidence 2233322 2222222211 1444455566678888642 356777776 558998654
No 127
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=35.68 E-value=99 Score=28.99 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=22.7
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
.-+|+|+|.+.|. +...|+.+ + .++||||.
T Consensus 49 ~~~vLDiGcG~G~----~~~~l~~~-~----~~v~~vD~ 78 (226)
T 3m33_A 49 QTRVLEAGCGHGP----DAARFGPQ-A----ARWAAYDF 78 (226)
T ss_dssp TCEEEEESCTTSH----HHHHHGGG-S----SEEEEEES
T ss_pred CCeEEEeCCCCCH----HHHHHHHc-C----CEEEEEEC
Confidence 3579999999995 55566665 2 48999996
No 128
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=34.75 E-value=1.1e+02 Score=30.78 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=27.3
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
+.|++++.-...-.|+|+|-|.|.- ...|+.+ + -++||||.
T Consensus 32 ~~i~~~~~~~~~~~VLDiG~G~G~l----t~~La~~-~----~~v~~vDi 72 (299)
T 2h1r_A 32 DKIIYAAKIKSSDIVLEIGCGTGNL----TVKLLPL-A----KKVITIDI 72 (299)
T ss_dssp HHHHHHHCCCTTCEEEEECCTTSTT----HHHHTTT-S----SEEEEECS
T ss_pred HHHHHhcCCCCcCEEEEEcCcCcHH----HHHHHhc-C----CEEEEEEC
Confidence 3455555434445899999999964 3456655 2 38999996
No 129
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=33.98 E-value=2.6e+02 Score=25.09 Aligned_cols=50 Identities=10% Similarity=0.047 Sum_probs=30.9
Q ss_pred EEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEE
Q 039114 363 HIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431 (632)
Q Consensus 363 HIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~ 431 (632)
.|+|+|-+.|. +...|+.+ | .++||||.. ...++.+.+++.. .++.++|.
T Consensus 32 ~vLdiGcG~G~----~~~~l~~~-~----~~v~~vD~s------~~~~~~a~~~~~~----~~~~~~~~ 81 (202)
T 2kw5_A 32 KILCLAEGEGR----NACFLASL-G----YEVTAVDQS------SVGLAKAKQLAQE----KGVKITTV 81 (202)
T ss_dssp EEEECCCSCTH----HHHHHHTT-T----CEEEEECSS------HHHHHHHHHHHHH----HTCCEEEE
T ss_pred CEEEECCCCCH----hHHHHHhC-C----CeEEEEECC------HHHHHHHHHHHHh----cCCceEEE
Confidence 89999999884 34556655 2 389999863 3445555444432 34555553
No 130
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=33.85 E-value=1.4e+02 Score=29.65 Aligned_cols=40 Identities=13% Similarity=0.151 Sum_probs=26.7
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
.|++++.-...-+|+|+|-|.|.--..|.+. + -++||||.
T Consensus 19 ~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~-----~----~~v~~vD~ 58 (285)
T 1zq9_A 19 SIIDKAALRPTDVVLEVGPGTGNMTVKLLEK-----A----KKVVACEL 58 (285)
T ss_dssp HHHHHTCCCTTCEEEEECCTTSTTHHHHHHH-----S----SEEEEEES
T ss_pred HHHHhcCCCCCCEEEEEcCcccHHHHHHHhh-----C----CEEEEEEC
Confidence 4445554444558999999999755554443 2 28999996
No 131
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=33.71 E-value=96 Score=29.82 Aligned_cols=54 Identities=13% Similarity=0.147 Sum_probs=32.3
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEE
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYS 431 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~ 431 (632)
-.|+|+|.+.|.--. .|+.+- |+..+||+||.. .+.++.+.+ .++..|++ .+|.
T Consensus 65 ~~VLdiG~G~G~~~~----~la~~~--~~~~~v~~vD~s------~~~~~~a~~----~~~~~g~~~~v~~~ 120 (248)
T 3tfw_A 65 KRILEIGTLGGYSTI----WMAREL--PADGQLLTLEAD------AHHAQVARE----NLQLAGVDQRVTLR 120 (248)
T ss_dssp SEEEEECCTTSHHHH----HHHTTS--CTTCEEEEEECC------HHHHHHHHH----HHHHTTCTTTEEEE
T ss_pred CEEEEecCCchHHHH----HHHHhC--CCCCEEEEEECC------HHHHHHHHH----HHHHcCCCCcEEEE
Confidence 479999999985433 344332 335799999963 344444433 34455664 5554
No 132
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=33.48 E-value=57 Score=33.22 Aligned_cols=119 Identities=20% Similarity=0.166 Sum_probs=61.7
Q ss_pred hHHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcE
Q 039114 349 NRMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPF 428 (632)
Q Consensus 349 NqaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpF 428 (632)
.+.|++.+.....-+|+|+|-|.|.- ...|+.+ + |..++||||.. ...++.+.+++. ..++..
T Consensus 185 ~~~ll~~l~~~~~~~VLDlGcG~G~~----~~~la~~--~-~~~~v~~vD~s------~~~l~~a~~~~~----~~~~~~ 247 (343)
T 2pjd_A 185 SQLLLSTLTPHTKGKVLDVGCGAGVL----SVAFARH--S-PKIRLTLCDVS------APAVEASRATLA----ANGVEG 247 (343)
T ss_dssp HHHHHHHSCTTCCSBCCBTTCTTSHH----HHHHHHH--C-TTCBCEEEESB------HHHHHHHHHHHH----HTTCCC
T ss_pred HHHHHHhcCcCCCCeEEEecCccCHH----HHHHHHH--C-CCCEEEEEECC------HHHHHHHHHHHH----HhCCCC
Confidence 56677777433334799999999953 3334433 2 45689999963 344555554443 346665
Q ss_pred EEEeecccccccCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeec
Q 039114 429 EYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVAN 496 (632)
Q Consensus 429 eF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n 496 (632)
+| +.....+. . -..=++|+.|..| |+..... ......+|+.+ +-|+|.-.++.+.+
T Consensus 248 ~~--~~~d~~~~----~-~~~fD~Iv~~~~~--~~g~~~~---~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 248 EV--FASNVFSE----V-KGRFDMIISNPPF--HDGMQTS---LDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp EE--EECSTTTT----C-CSCEEEEEECCCC--CSSSHHH---HHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EE--EEcccccc----c-cCCeeEEEECCCc--ccCccCC---HHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 55 22222111 1 1112355555543 4321100 01234566655 56899876655443
No 133
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=33.42 E-value=43 Score=31.61 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=52.0
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIK 441 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~ 441 (632)
-.|+|+|.+.|. +...|+.+ ++ ++||||.. ...++.+.+++ .. -..+|... .+.++.
T Consensus 58 ~~vLD~GcG~G~----~~~~la~~--~~---~v~gvD~s------~~~~~~a~~~~----~~--~~~~~~~~--d~~~~~ 114 (245)
T 3ggd_A 58 LPLIDFACGNGT----QTKFLSQF--FP---RVIGLDVS------KSALEIAAKEN----TA--ANISYRLL--DGLVPE 114 (245)
T ss_dssp SCEEEETCTTSH----HHHHHHHH--SS---CEEEEESC------HHHHHHHHHHS----CC--TTEEEEEC--CTTCHH
T ss_pred CeEEEEcCCCCH----HHHHHHHh--CC---CEEEEECC------HHHHHHHHHhC----cc--cCceEEEC--cccccc
Confidence 469999999883 34445543 33 89999963 23444444333 11 13444322 222221
Q ss_pred cccccCCCC-ceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEE-EEEee
Q 039114 442 LDDLKIDRD-EVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLF-VHGVA 495 (632)
Q Consensus 442 ~e~L~i~~~-E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vf-v~~e~ 495 (632)
... .++.+ -.-+|-|..-+||+.++. +..+|+.+ +.|+|.-. ++.+.
T Consensus 115 ~~~-~~~~~~~~d~v~~~~~~~~~~~~~------~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 115 QAA-QIHSEIGDANIYMRTGFHHIPVEK------RELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp HHH-HHHHHHCSCEEEEESSSTTSCGGG------HHHHHHHHHHHHTTTCEEEEEEE
T ss_pred ccc-ccccccCccEEEEcchhhcCCHHH------HHHHHHHHHHHcCCCCEEEEEeC
Confidence 110 01100 133455666778876431 34555555 66899764 44443
No 134
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=33.09 E-value=1.9e+02 Score=30.49 Aligned_cols=99 Identities=12% Similarity=0.060 Sum_probs=54.5
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEEeecccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYSAIAQKWET 439 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~~Ia~~~E~ 439 (632)
.-+|+|+|-|.|.-- ..||.+ .-+++|||.. .+.++.+.++ |+..|++ .+|.. ..+++
T Consensus 287 ~~~VLDlgcG~G~~~----~~la~~-----~~~V~gvD~s------~~al~~A~~n----~~~~~~~~v~f~~--~d~~~ 345 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFT----LPLATQ-----AASVVGVEGV------PALVEKGQQN----ARLNGLQNVTFYH--ENLEE 345 (433)
T ss_dssp TCEEEEESCTTTTTH----HHHHTT-----SSEEEEEESC------HHHHHHHHHH----HHHTTCCSEEEEE--CCTTS
T ss_pred CCEEEECCCCCCHHH----HHHHhh-----CCEEEEEeCC------HHHHHHHHHH----HHHcCCCceEEEE--CCHHH
Confidence 347999999998533 345554 2489999963 3445555444 3445664 55543 23332
Q ss_pred cCcc-cccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEE
Q 039114 440 IKLD-DLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHG 493 (632)
Q Consensus 440 l~~e-~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~ 493 (632)
.-.. .+.-..=++|++|-.+. ..+.+++.|..++|+.++..
T Consensus 346 ~l~~~~~~~~~fD~Vv~dPPr~-------------g~~~~~~~l~~~~p~~ivyv 387 (433)
T 1uwv_A 346 DVTKQPWAKNGFDKVLLDPARA-------------GAAGVMQQIIKLEPIRIVYV 387 (433)
T ss_dssp CCSSSGGGTTCCSEEEECCCTT-------------CCHHHHHHHHHHCCSEEEEE
T ss_pred HhhhhhhhcCCCCEEEECCCCc-------------cHHHHHHHHHhcCCCeEEEE
Confidence 1110 01111224666552211 12468899999999988754
No 135
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=32.89 E-value=1.1e+02 Score=27.97 Aligned_cols=44 Identities=11% Similarity=0.134 Sum_probs=27.7
Q ss_pred hhHHHHhccc--cCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 348 TNRMIGKTTE--KATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 348 ANqaILeA~~--g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
..+.+++.+. -.+.-.|+|+|.|.|. +...|+.+ +..++||||.
T Consensus 46 ~~~~~~~~l~~~~~~~~~vLDiG~G~G~----~~~~l~~~----~~~~v~~vD~ 91 (205)
T 3grz_A 46 TTQLAMLGIERAMVKPLTVADVGTGSGI----LAIAAHKL----GAKSVLATDI 91 (205)
T ss_dssp HHHHHHHHHHHHCSSCCEEEEETCTTSH----HHHHHHHT----TCSEEEEEES
T ss_pred cHHHHHHHHHHhccCCCEEEEECCCCCH----HHHHHHHC----CCCEEEEEEC
Confidence 3344444443 2345689999999983 33346654 2358999996
No 136
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=32.29 E-value=1.4e+02 Score=30.70 Aligned_cols=113 Identities=10% Similarity=0.070 Sum_probs=58.9
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhC-CCcEEEEeeccccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERC-NVPFEYSAIAQKWETI 440 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~-gVpFeF~~Ia~~~E~l 440 (632)
-+|+|+|.|.|. +...|+.+ +|..+||+|+.. .+.++.+.+++..++..+ +-.++|.. ..+.+.
T Consensus 122 ~~VLdIG~G~G~----~a~~la~~---~~~~~V~~VDis------~~~l~~Ar~~~~~~~~gl~~~rv~~~~--~D~~~~ 186 (334)
T 1xj5_A 122 KKVLVIGGGDGG----VLREVARH---ASIEQIDMCEID------KMVVDVSKQFFPDVAIGYEDPRVNLVI--GDGVAF 186 (334)
T ss_dssp CEEEEETCSSSH----HHHHHTTC---TTCCEEEEEESC------HHHHHHHHHHCHHHHGGGGSTTEEEEE--SCHHHH
T ss_pred CEEEEECCCccH----HHHHHHHc---CCCCEEEEEECC------HHHHHHHHHHHHhhccccCCCcEEEEE--CCHHHH
Confidence 489999999884 55666655 355799999963 355666666666554333 12344432 222111
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeec
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVAN 496 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n 496 (632)
+..+.-..=.+|++|+...++. . +.. -...+++.+ +.|+|.-+++...+
T Consensus 187 -l~~~~~~~fDlIi~d~~~p~~~-~-~~l----~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 187 -LKNAAEGSYDAVIVDSSDPIGP-A-KEL----FEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp -HHTSCTTCEEEEEECCCCTTSG-G-GGG----GSHHHHHHHHHHEEEEEEEEEECC
T ss_pred -HHhccCCCccEEEECCCCccCc-c-hhh----hHHHHHHHHHHhcCCCcEEEEecC
Confidence 0011101124666665322211 0 000 024566555 66899987765433
No 137
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=31.32 E-value=1.8e+02 Score=26.89 Aligned_cols=44 Identities=16% Similarity=0.303 Sum_probs=27.6
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHH
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRL 417 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL 417 (632)
.-.|+|+|.|.|. +...|+.+. |..++||||.. ...++.+.+++
T Consensus 42 ~~~vLDiGcG~G~----~~~~la~~~---p~~~v~gvD~s------~~~l~~a~~~~ 85 (214)
T 1yzh_A 42 NPIHVEVGSGKGA----FVSGMAKQN---PDINYIGIDIQ------KSVLSYALDKV 85 (214)
T ss_dssp CCEEEEESCTTSH----HHHHHHHHC---TTSEEEEEESC------HHHHHHHHHHH
T ss_pred CCeEEEEccCcCH----HHHHHHHHC---CCCCEEEEEcC------HHHHHHHHHHH
Confidence 3469999999993 333444432 35799999963 34455554443
No 138
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=31.22 E-value=59 Score=29.52 Aligned_cols=42 Identities=21% Similarity=0.354 Sum_probs=29.8
Q ss_pred CCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeeccccc
Q 039114 389 PPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWE 438 (632)
Q Consensus 389 PP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E 438 (632)
.-.+||||+ |...-.|..+.-.+.++.|||...|..+..++|
T Consensus 123 ~l~i~itgv--------peqvrkelakeaerl~~efni~v~y~imtgsle 164 (170)
T 4hhu_A 123 RLVIVITGV--------PEQVRKELAKEAERLKAEFNINVQYQIMTGSLE 164 (170)
T ss_dssp EEEEEEESC--------CHHHHHHHHHHHHHHHHHHTCEEEEEEEETTEE
T ss_pred EEEEEEeCC--------cHHHHHHHHHHHHHHHHhcceEEEEEEEeccee
Confidence 347999999 344445555555566788999999988876554
No 139
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=30.14 E-value=2.9e+02 Score=27.51 Aligned_cols=66 Identities=12% Similarity=0.111 Sum_probs=37.9
Q ss_pred HHHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-E
Q 039114 350 RMIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-F 428 (632)
Q Consensus 350 qaILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-F 428 (632)
..|++.+.-...-+|+|+|-|.|. +...|+.+ +++..++|||+.. .+.++.+.+++ +..|++ .
T Consensus 65 ~~l~~~l~~~~~~~VLDiGcG~G~----~~~~la~~--~~~~~~v~gvD~s------~~~~~~a~~~~----~~~g~~~v 128 (317)
T 1dl5_A 65 ALFMEWVGLDKGMRVLEIGGGTGY----NAAVMSRV--VGEKGLVVSVEYS------RKICEIAKRNV----ERLGIENV 128 (317)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSH----HHHHHHHH--HCTTCEEEEEESC------HHHHHHHHHHH----HHTTCCSE
T ss_pred HHHHHhcCCCCcCEEEEecCCchH----HHHHHHHh--cCCCCEEEEEECC------HHHHHHHHHHH----HHcCCCCe
Confidence 345555554455689999999884 33444433 2234689999963 34455544443 344554 4
Q ss_pred EEE
Q 039114 429 EYS 431 (632)
Q Consensus 429 eF~ 431 (632)
+|.
T Consensus 129 ~~~ 131 (317)
T 1dl5_A 129 IFV 131 (317)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 140
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=29.32 E-value=3.2e+02 Score=26.08 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=55.8
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeecccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKW 437 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~ 437 (632)
+.-.|+|+|.|.|. +...|+.+. + . +|||||.. ...++.+.+++ +..++. ++| +...+
T Consensus 49 ~~~~vLDlG~G~G~----~~~~la~~~--~-~-~v~gvDi~------~~~~~~a~~n~----~~~~~~~~v~~--~~~D~ 108 (259)
T 3lpm_A 49 RKGKIIDLCSGNGI----IPLLLSTRT--K-A-KIVGVEIQ------ERLADMAKRSV----AYNQLEDQIEI--IEYDL 108 (259)
T ss_dssp SCCEEEETTCTTTH----HHHHHHTTC--C-C-EEEEECCS------HHHHHHHHHHH----HHTTCTTTEEE--ECSCG
T ss_pred CCCEEEEcCCchhH----HHHHHHHhc--C-C-cEEEEECC------HHHHHHHHHHH----HHCCCcccEEE--EECcH
Confidence 34579999999993 444667663 2 2 99999963 33444444433 344554 444 33333
Q ss_pred cccCcccccCCCCceEEEEeecccC---CCCCCc----cc---ccchHHHHHHHH-HhhCCCEEEEEe
Q 039114 438 ETIKLDDLKIDRDEVTVVTCMYRLN---YLPDDT----QV---KDSLRDAVLRLI-KRINPDLFVHGV 494 (632)
Q Consensus 438 E~l~~e~L~i~~~E~LaVN~~~~L~---~L~de~----v~---~~spRd~vL~~I-r~L~P~Vfv~~e 494 (632)
.++.. .+.-..=++|+.|-.|.-. ++.... +. .....+.+|..+ +-|+|.-.++.+
T Consensus 109 ~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 109 KKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp GGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 33221 1111223577777666433 221110 00 001234566655 558998765544
No 141
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=29.12 E-value=97 Score=28.20 Aligned_cols=53 Identities=17% Similarity=0.154 Sum_probs=32.1
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEE
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYS 431 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~ 431 (632)
-+|+|+|-|.|.--..|.+.+ |..++||||.. ...++.+.+ .++..+++ .+|.
T Consensus 67 ~~vLDiG~G~G~~~~~l~~~~-------~~~~v~~vD~s------~~~~~~a~~----~~~~~~~~~v~~~ 120 (207)
T 1jsx_A 67 ERFIDVGTGPGLPGIPLSIVR-------PEAHFTLLDSL------GKRVRFLRQ----VQHELKLENIEPV 120 (207)
T ss_dssp SEEEEETCTTTTTHHHHHHHC-------TTSEEEEEESC------HHHHHHHHH----HHHHTTCSSEEEE
T ss_pred CeEEEECCCCCHHHHHHHHHC-------CCCEEEEEeCC------HHHHHHHHH----HHHHcCCCCeEEE
Confidence 489999999996554444432 34699999963 233443333 34455665 5553
No 142
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=28.67 E-value=1.3e+02 Score=28.07 Aligned_cols=31 Identities=26% Similarity=0.433 Sum_probs=20.5
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
-+|+|+|.+.|.-=. .|+.+- |..+||+|+.
T Consensus 56 ~~vLdiG~G~G~~~~----~la~~~---~~~~v~~vD~ 86 (233)
T 2gpy_A 56 ARILEIGTAIGYSAI----RMAQAL---PEATIVSIER 86 (233)
T ss_dssp SEEEEECCTTSHHHH----HHHHHC---TTCEEEEECC
T ss_pred CEEEEecCCCcHHHH----HHHHHC---CCCEEEEEEC
Confidence 379999999885322 333321 2369999986
No 143
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=28.19 E-value=1.3e+02 Score=30.46 Aligned_cols=99 Identities=15% Similarity=0.177 Sum_probs=48.9
Q ss_pred CcchhhhH-HHhhHH----HHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHH
Q 039114 338 SPFRKASN-FLTNRM----IGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEE 412 (632)
Q Consensus 338 ~Pf~kfa~-f~ANqa----ILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~lee 412 (632)
-|=.+++. |..+.. |++++.-...-+|+|+|-|.|..-. .|+.+ + -++|||+.. .+.++.
T Consensus 23 ~~~k~~GQnfL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~----~La~~-~----~~V~aVEid------~~li~~ 87 (295)
T 3gru_A 23 KPKKKLGQCFLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTE----ELAKN-A----KKVYVIEID------KSLEPY 87 (295)
T ss_dssp -------CCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHH----HHHHH-S----SEEEEEESC------GGGHHH
T ss_pred CCccccCccccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHH----HHHhc-C----CEEEEEECC------HHHHHH
Confidence 34445554 444444 4445544455689999999996444 44443 1 379999973 233444
Q ss_pred HHHHHHHHHHhCCCcEEEEeecccccccCcccccCCCCceEEEEeeccc
Q 039114 413 TGHRLKKAAERCNVPFEYSAIAQKWETIKLDDLKIDRDEVTVVTCMYRL 461 (632)
Q Consensus 413 TGrRL~~fA~~~gVpFeF~~Ia~~~E~l~~e~L~i~~~E~LaVN~~~~L 461 (632)
..+++. ..+ .++| +......+...+. +-.+++.|..|..
T Consensus 88 a~~~~~----~~~-~v~v--i~gD~l~~~~~~~---~fD~Iv~NlPy~i 126 (295)
T 3gru_A 88 ANKLKE----LYN-NIEI--IWGDALKVDLNKL---DFNKVVANLPYQI 126 (295)
T ss_dssp HHHHHH----HCS-SEEE--EESCTTTSCGGGS---CCSEEEEECCGGG
T ss_pred HHHHhc----cCC-CeEE--EECchhhCCcccC---CccEEEEeCcccc
Confidence 444443 111 2333 3333333333332 2347888877643
No 144
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=27.66 E-value=1.5e+02 Score=27.96 Aligned_cols=99 Identities=13% Similarity=0.165 Sum_probs=50.4
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEEEeecccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEYSAIAQKWET 439 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF~~Ia~~~E~ 439 (632)
.-+|+|+|.|.|.-=.. |+.+. |..++||||.. .+.++.+.+ .++..|++ ++|. ...+++
T Consensus 71 ~~~vLDiG~G~G~~~~~----la~~~---~~~~v~~vD~s------~~~~~~a~~----~~~~~~~~~v~~~--~~d~~~ 131 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLP----IKICF---PHLHVTIVDSL------NKRITFLEK----LSEALQLENTTFC--HDRAET 131 (240)
T ss_dssp CCEEEEECSSSCTTHHH----HHHHC---TTCEEEEEESC------HHHHHHHHH----HHHHHTCSSEEEE--ESCHHH
T ss_pred CCEEEEecCCCCHHHHH----HHHhC---CCCEEEEEeCC------HHHHHHHHH----HHHHcCCCCEEEE--eccHHH
Confidence 35899999999963222 22211 34689999963 233444333 34445664 4443 333444
Q ss_pred cCcc-cccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 440 IKLD-DLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 440 l~~e-~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
+... .+. ..=++|+.+. + .....+|+.+ +-|+|.-.++.
T Consensus 132 ~~~~~~~~-~~fD~V~~~~------~--------~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 132 FGQRKDVR-ESYDIVTARA------V--------ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp HTTCTTTT-TCEEEEEEEC------C--------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred hccccccc-CCccEEEEec------c--------CCHHHHHHHHHHhcCCCCEEEE
Confidence 3211 000 0112333322 1 1246777777 67899866543
No 145
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=27.26 E-value=2.8e+02 Score=27.67 Aligned_cols=111 Identities=8% Similarity=0.040 Sum_probs=55.7
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-cEEEEeeccccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-PFEYSAIAQKWETI 440 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-pFeF~~Ia~~~E~l 440 (632)
-.|+|+|.|.|. +...|+.+ +|..+||+|+.. ...++.+.+++...+..++- .++|.. .....+
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~---~~~~~v~~vDid------~~~i~~a~~~~~~~~~~~~~~~v~~~~--~D~~~~ 161 (304)
T 3bwc_A 97 ERVLIIGGGDGG----VLREVLRH---GTVEHCDLVDID------GEVMEQSKQHFPQISRSLADPRATVRV--GDGLAF 161 (304)
T ss_dssp CEEEEEECTTSH----HHHHHHTC---TTCCEEEEEESC------HHHHHHHHHHCHHHHGGGGCTTEEEEE--SCHHHH
T ss_pred CeEEEEcCCCCH----HHHHHHhC---CCCCEEEEEECC------HHHHHHHHHHhHHhhcccCCCcEEEEE--CcHHHH
Confidence 479999999883 55566654 345799999973 34566666666555444322 244432 122111
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEe
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGV 494 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e 494 (632)
-. .+.-..=++|++++... ..+++... ...+|+.+ +.|+|.-+++..
T Consensus 162 ~~-~~~~~~fDvIi~d~~~~--~~~~~~l~----~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 162 VR-QTPDNTYDVVIIDTTDP--AGPASKLF----GEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp HH-SSCTTCEEEEEEECC-----------C----CHHHHHHHHHHEEEEEEEEEE
T ss_pred HH-hccCCceeEEEECCCCc--cccchhhh----HHHHHHHHHHhcCCCcEEEEe
Confidence 00 00011124666665432 11111100 13566665 668998765543
No 146
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=27.02 E-value=97 Score=28.45 Aligned_cols=56 Identities=16% Similarity=0.266 Sum_probs=34.0
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHH
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLK 418 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~ 418 (632)
.+++.+.-...-+|+|+|-+.|.--..|.+.+ | |..++|+|+.. .+.++.+.+++.
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----~-~~~~v~~vD~~------~~~~~~a~~~~~ 123 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIV-----G-EDGLVVSIERI------PELAEKAERTLR 123 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHH-----C-TTSEEEEEESC------HHHHHHHHHHHH
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHh-----C-CCCEEEEEeCC------HHHHHHHHHHHH
Confidence 34444444445689999999886554444443 2 34589999863 344555555444
No 147
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=26.98 E-value=1.9e+02 Score=26.63 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=52.9
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC---cEEEEeeccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV---PFEYSAIAQKWE 438 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV---pFeF~~Ia~~~E 438 (632)
-.|+|+|-|.|.- .+. ++.+ |+ -++||||.. .+.++.+.+++ +..|+ ..+|.. ....
T Consensus 55 ~~vLDlGcGtG~~---~~~-~~~~--~~--~~v~gvD~s------~~~l~~a~~~~----~~~~~~~~~v~~~~--~d~~ 114 (201)
T 2ift_A 55 SECLDGFAGSGSL---GFE-ALSR--QA--KKVTFLELD------KTVANQLKKNL----QTLKCSSEQAEVIN--QSSL 114 (201)
T ss_dssp CEEEETTCTTCHH---HHH-HHHT--TC--SEEEEECSC------HHHHHHHHHHH----HHTTCCTTTEEEEC--SCHH
T ss_pred CeEEEcCCccCHH---HHH-HHHc--cC--CEEEEEECC------HHHHHHHHHHH----HHhCCCccceEEEE--CCHH
Confidence 4799999999842 222 2333 21 489999963 34455554444 34455 345432 2222
Q ss_pred ccCcccccCCC-CceEEEEeecccCCCCCCcccccchHHHHHHHHHh---hCCCEEEEEeec
Q 039114 439 TIKLDDLKIDR-DEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKR---INPDLFVHGVAN 496 (632)
Q Consensus 439 ~l~~e~L~i~~-~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~---L~P~Vfv~~e~n 496 (632)
++... +.-.. =++|+.|..|. . .-...+|+.+.+ |+|.-+++...+
T Consensus 115 ~~~~~-~~~~~~fD~I~~~~~~~---~--------~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 115 DFLKQ-PQNQPHFDVVFLDPPFH---F--------NLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp HHTTS-CCSSCCEEEEEECCCSS---S--------CHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHh-hccCCCCCEEEECCCCC---C--------ccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 21110 00011 13556555542 1 123578888865 899866554443
No 148
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=26.72 E-value=21 Score=39.32 Aligned_cols=78 Identities=10% Similarity=-0.006 Sum_probs=50.7
Q ss_pred hhHHHhhHHHHhccccCCeeEEEEcccc--cc--------------cccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCC
Q 039114 343 ASNFLTNRMIGKTTEKATKVHIIDFGIS--YG--------------FQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRP 406 (632)
Q Consensus 343 fa~f~ANqaILeA~~g~~~VHIIDfgI~--~G--------------~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp 406 (632)
.+.++.|-+|++++- +..||.||..+- +| +.|..-+++++.+..| |+| ++.|+.|
T Consensus 90 ~s~~~~~l~Im~acl-eaGv~YlDTa~E~~~p~~~~~~~~p~~~~~Y~~~~~~~~~~~~~~G------tAi--lg~G~nP 160 (480)
T 2ph5_A 90 VSIGISSLALIILCN-QKGALYINAATEPWKEEFVMEKMALNRRTNYSLREEVLRLKDKTQK------TAL--ITHGANP 160 (480)
T ss_dssp CCSSSCHHHHHHHHH-HHTCEEEESSCCCCCC----------CCCHHHHHHHHHTTTTTCCS------CEE--CSCBTTT
T ss_pred CCccccCHHHHHHHH-HcCCCEEECCCCcccccccccccCcchhhhHHHHHHHHHHHHhcCC------cEE--ecCCCCc
Confidence 444557888899884 345999999862 11 1233336667655444 555 5677888
Q ss_pred hHHHHHHHHHHHHHHHhCCCcEE
Q 039114 407 AERVEETGHRLKKAAERCNVPFE 429 (632)
Q Consensus 407 ~e~leeTGrRL~~fA~~~gVpFe 429 (632)
--.---+..-|..+|+..|+||+
T Consensus 161 Gvvsvf~~~Al~~la~d~g~~~~ 183 (480)
T 2ph5_A 161 GLVSHFIKEALLNIAKDNGLTIN 183 (480)
T ss_dssp BHHHHHHHHHHHHHHHTTTCCCC
T ss_pred cHHHHHHHHHHHhHhhhcCCccc
Confidence 65555566777888988888865
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=26.53 E-value=48 Score=30.07 Aligned_cols=35 Identities=20% Similarity=0.432 Sum_probs=24.4
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCC
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELP 400 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p 400 (632)
.+..+|+|+|.|.|. +...|+.+. |..++||||..
T Consensus 29 ~~~~~vLDiG~G~G~----~~~~l~~~~---~~~~v~~vD~~ 63 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGC----IAVSIALAC---PGVSVTAVDLS 63 (215)
T ss_dssp CTTEEEEEEESSBCH----HHHHHHHHC---TTEEEEEEECC
T ss_pred CCCCEEEEecCCHhH----HHHHHHHhC---CCCeEEEEECC
Confidence 556799999999995 333333331 45799999974
No 150
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=26.30 E-value=3.9e+02 Score=28.28 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=53.9
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccccC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWETIK 441 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~l~ 441 (632)
-.|+|+|-+.|. +...||.+ + -+++|||.. .+.++.+.+++ +..|+..+|. ...++++.
T Consensus 292 ~~VLDlgcG~G~----~sl~la~~-~----~~V~gvD~s------~~ai~~A~~n~----~~ngl~v~~~--~~d~~~~~ 350 (425)
T 2jjq_A 292 EKILDMYSGVGT----FGIYLAKR-G----FNVKGFDSN------EFAIEMARRNV----EINNVDAEFE--VASDREVS 350 (425)
T ss_dssp SEEEEETCTTTH----HHHHHHHT-T----CEEEEEESC------HHHHHHHHHHH----HHHTCCEEEE--ECCTTTCC
T ss_pred CEEEEeeccchH----HHHHHHHc-C----CEEEEEECC------HHHHHHHHHHH----HHcCCcEEEE--ECChHHcC
Confidence 378999999884 33345554 2 389999963 34555554443 3446664443 33333332
Q ss_pred cccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHHHhhCCCEEEEE
Q 039114 442 LDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLIKRINPDLFVHG 493 (632)
Q Consensus 442 ~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~Ir~L~P~Vfv~~ 493 (632)
.. .=++|++|-.+ . ...+.+++.|+.++|+-++..
T Consensus 351 ~~-----~fD~Vv~dPPr-------~-----g~~~~~~~~l~~l~p~givyv 385 (425)
T 2jjq_A 351 VK-----GFDTVIVDPPR-------A-----GLHPRLVKRLNREKPGVIVYV 385 (425)
T ss_dssp CT-----TCSEEEECCCT-------T-----CSCHHHHHHHHHHCCSEEEEE
T ss_pred cc-----CCCEEEEcCCc-------c-----chHHHHHHHHHhcCCCcEEEE
Confidence 11 22466664321 0 112468999999999987654
No 151
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=25.86 E-value=4.2e+02 Score=26.48 Aligned_cols=111 Identities=12% Similarity=0.138 Sum_probs=56.1
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhC-CCcEEEEeeccccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERC-NVPFEYSAIAQKWETI 440 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~-gVpFeF~~Ia~~~E~l 440 (632)
-+|+|+|.+.|. +...|+.+. |..+||+|+.. .+.++.+.+++...+..+ .-.+++..-. -.+-+
T Consensus 97 ~~VLdiG~G~G~----~~~~l~~~~---~~~~v~~vDid------~~~i~~ar~~~~~~~~~~~~~rv~v~~~D-a~~~l 162 (304)
T 2o07_A 97 RKVLIIGGGDGG----VLREVVKHP---SVESVVQCEID------EDVIQVSKKFLPGMAIGYSSSKLTLHVGD-GFEFM 162 (304)
T ss_dssp CEEEEEECTTSH----HHHHHTTCT---TCCEEEEEESC------HHHHHHHHHHCHHHHGGGGCTTEEEEESC-HHHHH
T ss_pred CEEEEECCCchH----HHHHHHHcC---CCCEEEEEECC------HHHHHHHHHHhHHhhcccCCCcEEEEECc-HHHHH
Confidence 479999999883 555666552 45799999963 345666666666554433 2234443211 11111
Q ss_pred CcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEee
Q 039114 441 KLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVA 495 (632)
Q Consensus 441 ~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~ 495 (632)
.. . -..=++|++++..... +.+.. -...+++.+ +.|+|.-+++...
T Consensus 163 ~~--~-~~~fD~Ii~d~~~~~~--~~~~l----~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 163 KQ--N-QDAFDVIITDSSDPMG--PAESL----FKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp HT--C-SSCEEEEEEECC-----------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred hh--C-CCCceEEEECCCCCCC--cchhh----hHHHHHHHHHhccCCCeEEEEec
Confidence 10 0 1122567776543211 11000 013466655 6689997766543
No 152
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=25.50 E-value=1.1e+02 Score=29.25 Aligned_cols=55 Identities=9% Similarity=0.067 Sum_probs=33.1
Q ss_pred HhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHH
Q 039114 353 GKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLK 418 (632)
Q Consensus 353 LeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~ 418 (632)
++.+.+.....|+|+|.+.|. +...|+.+- ..|..+|||||.. ...++.+.+++.
T Consensus 44 l~~~~~~~~~~vLD~gcGsG~----~~~~la~~~-~~~~~~v~gvDis------~~~l~~A~~~~~ 98 (250)
T 1o9g_A 44 LARLPGDGPVTLWDPCCGSGY----LLTVLGLLH-RRSLRQVIASDVD------PAPLELAAKNLA 98 (250)
T ss_dssp HHTSSCCSCEEEEETTCTTSH----HHHHHHHHT-GGGEEEEEEEESC------HHHHHHHHHHHH
T ss_pred HHhcccCCCCeEEECCCCCCH----HHHHHHHHh-ccCCCeEEEEECC------HHHHHHHHHHHH
Confidence 344444466899999999993 333344331 1135799999973 344555554443
No 153
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=24.37 E-value=1.2e+02 Score=29.98 Aligned_cols=40 Identities=10% Similarity=0.081 Sum_probs=28.6
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
.|++++.-...-+|+|+|-|.|. |-..|+.+. -++|||+.
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~----lt~~La~~~-----~~V~avEi 59 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGA----LTDYLLTEC-----DNLALVEI 59 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTT----THHHHTTTS-----SEEEEEEC
T ss_pred HHHHhcCCCCcCEEEEEcccccH----HHHHHHHhC-----CEEEEEEC
Confidence 35566554455689999999995 566677652 38999996
No 154
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=24.06 E-value=1.6e+02 Score=27.96 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=32.2
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc-EEE
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP-FEY 430 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp-FeF 430 (632)
..-.|+|+|-|.|.- ...||.+. |..+++||+.. ...++.+.++ ++..|++ ++|
T Consensus 34 ~~~~vLDiGcG~G~~----~~~lA~~~---p~~~v~giD~s------~~~l~~a~~~----~~~~~l~nv~~ 88 (218)
T 3dxy_A 34 EAPVTLEIGFGMGAS----LVAMAKDR---PEQDFLGIEVH------SPGVGACLAS----AHEEGLSNLRV 88 (218)
T ss_dssp CCCEEEEESCTTCHH----HHHHHHHC---TTSEEEEECSC------HHHHHHHHHH----HHHTTCSSEEE
T ss_pred CCCeEEEEeeeChHH----HHHHHHHC---CCCeEEEEEec------HHHHHHHHHH----HHHhCCCcEEE
Confidence 344799999999943 33444432 45789999973 3345444333 4455653 454
No 155
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=23.99 E-value=98 Score=29.56 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=54.0
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWET 439 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~ 439 (632)
.--+|+|+|.|.|. +...|+.+. | -++|||+.. .+.+ ++..+.++..+....|.. ..++.
T Consensus 60 ~G~rVLdiG~G~G~----~~~~~~~~~---~-~~v~~id~~------~~~~----~~a~~~~~~~~~~~~~~~--~~a~~ 119 (236)
T 3orh_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIECN------DGVF----QRLRDWAPRQTHKVIPLK--GLWED 119 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHTTSC---E-EEEEEEECC------HHHH----HHHHHHGGGCSSEEEEEE--SCHHH
T ss_pred CCCeEEEECCCccH----HHHHHHHhC---C-cEEEEEeCC------HHHH----HHHHHHHhhCCCceEEEe--ehHHh
Confidence 34589999999883 334455442 2 378999863 2223 334455666666655533 33443
Q ss_pred cCcccccCCCCceEEEE---eecccCCCCCCcccccchHHHHHHHH-HhhCCCEEE
Q 039114 440 IKLDDLKIDRDEVTVVT---CMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFV 491 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN---~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv 491 (632)
+... +.-..=+.+.+. +.+.++|+.+ ...+|+.+ |-|+|.-+.
T Consensus 120 ~~~~-~~~~~FD~i~~D~~~~~~~~~~~~~--------~~~~~~e~~rvLkPGG~l 166 (236)
T 3orh_A 120 VAPT-LPDGHFDGILYDTYPLSEETWHTHQ--------FNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp HGGG-SCTTCEEEEEECCCCCBGGGTTTHH--------HHHHHHTHHHHEEEEEEE
T ss_pred hccc-ccccCCceEEEeeeecccchhhhcc--------hhhhhhhhhheeCCCCEE
Confidence 3211 110111233222 3455555543 35666654 668998654
No 156
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=23.87 E-value=2.2e+02 Score=25.03 Aligned_cols=104 Identities=12% Similarity=0.005 Sum_probs=53.6
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc--EEEEeecccccc
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP--FEYSAIAQKWET 439 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp--FeF~~Ia~~~E~ 439 (632)
-.|+|+|-|.|. +...|+.++ .-++||||.. .+.++.+.++ ++..|++ .+|. ...+.+
T Consensus 33 ~~vLDlGcG~G~----~~~~l~~~~----~~~v~~vD~~------~~~~~~a~~~----~~~~~~~~~~~~~--~~d~~~ 92 (177)
T 2esr_A 33 GRVLDLFAGSGG----LAIEAVSRG----MSAAVLVEKN------RKAQAIIQDN----IIMTKAENRFTLL--KMEAER 92 (177)
T ss_dssp CEEEEETCTTCH----HHHHHHHTT----CCEEEEECCC------HHHHHHHHHH----HHTTTCGGGEEEE--CSCHHH
T ss_pred CeEEEeCCCCCH----HHHHHHHcC----CCEEEEEECC------HHHHHHHHHH----HHHcCCCCceEEE--ECcHHH
Confidence 479999999883 333455552 3589999963 3344444333 4455664 4443 323322
Q ss_pred cCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH---HhhCCCEEEEEeecCC
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI---KRINPDLFVHGVANGT 498 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I---r~L~P~Vfv~~e~n~~ 498 (632)
... .+. ..=.+++.|..|... ....++..+ +-|+|.-+++......
T Consensus 93 ~~~-~~~-~~fD~i~~~~~~~~~-----------~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 93 AID-CLT-GRFDLVFLDPPYAKE-----------TIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp HHH-HBC-SCEEEEEECCSSHHH-----------HHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred hHH-hhc-CCCCEEEECCCCCcc-----------hHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 100 000 112355555444211 124556666 5678987665554443
No 157
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=23.26 E-value=4.3e+02 Score=24.12 Aligned_cols=98 Identities=14% Similarity=0.235 Sum_probs=50.6
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEEeecccccc
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYSAIAQKWET 439 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~~Ia~~~E~ 439 (632)
+.-.|+|+|-+.|.-- ..|+.+ ++ ++||||.. ...++.+.+++ -++ +|.. ..+++
T Consensus 40 ~~~~vLdiG~G~G~~~----~~l~~~--~~---~v~~~D~s------~~~~~~a~~~~------~~~--~~~~--~d~~~ 94 (239)
T 3bxo_A 40 EASSLLDVACGTGTHL----EHFTKE--FG---DTAGLELS------EDMLTHARKRL------PDA--TLHQ--GDMRD 94 (239)
T ss_dssp TCCEEEEETCTTSHHH----HHHHHH--HS---EEEEEESC------HHHHHHHHHHC------TTC--EEEE--CCTTT
T ss_pred CCCeEEEecccCCHHH----HHHHHh--CC---cEEEEeCC------HHHHHHHHHhC------CCC--EEEE--CCHHH
Confidence 4468999999999433 334433 22 89999963 23344433332 123 3322 22222
Q ss_pred cCcccccCCCCceEEEEeec-ccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEE
Q 039114 440 IKLDDLKIDRDEVTVVTCMY-RLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHG 493 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~-~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~ 493 (632)
+ .. ++.+=+|-|.+ .++|+.+.. ....+|+.+ +.|+|.-.++.
T Consensus 95 ~-----~~-~~~~D~v~~~~~~~~~~~~~~-----~~~~~l~~~~~~L~pgG~l~~ 139 (239)
T 3bxo_A 95 F-----RL-GRKFSAVVSMFSSVGYLKTTE-----ELGAAVASFAEHLEPGGVVVV 139 (239)
T ss_dssp C-----CC-SSCEEEEEECTTGGGGCCSHH-----HHHHHHHHHHHTEEEEEEEEE
T ss_pred c-----cc-CCCCcEEEEcCchHhhcCCHH-----HHHHHHHHHHHhcCCCeEEEE
Confidence 2 22 23333333444 778876421 134566655 56799876544
No 158
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=23.20 E-value=1.3e+02 Score=26.33 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=27.3
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHH
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRL 417 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL 417 (632)
.+.-+|+|+|-+.|. +...|+.+- .++|||+.. .+.++.+.+++
T Consensus 32 ~~~~~vldiG~G~G~----~~~~l~~~~-----~~v~~~D~~------~~~~~~a~~~~ 75 (192)
T 1l3i_A 32 GKNDVAVDVGCGTGG----VTLELAGRV-----RRVYAIDRN------PEAISTTEMNL 75 (192)
T ss_dssp CTTCEEEEESCTTSH----HHHHHHTTS-----SEEEEEESC------HHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCH----HHHHHHHhc-----CEEEEEECC------HHHHHHHHHHH
Confidence 344589999999883 333445432 589999863 34455544443
No 159
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=22.87 E-value=1.4e+02 Score=28.31 Aligned_cols=55 Identities=9% Similarity=0.049 Sum_probs=32.9
Q ss_pred ccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCc
Q 039114 357 EKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVP 427 (632)
Q Consensus 357 ~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVp 427 (632)
...+.-+|+|+|.+.|.-=..|.+++ ||.-+||+|+.. .+.++.+. +.++..|+.
T Consensus 53 ~~~~~~~vLdiG~G~G~~~~~la~~~------~~~~~v~~vD~~------~~~~~~a~----~~~~~~g~~ 107 (221)
T 3dr5_A 53 NGNGSTGAIAITPAAGLVGLYILNGL------ADNTTLTCIDPE------SEHQRQAK----ALFREAGYS 107 (221)
T ss_dssp CCTTCCEEEEESTTHHHHHHHHHHHS------CTTSEEEEECSC------HHHHHHHH----HHHHHTTCC
T ss_pred CCCCCCCEEEEcCCchHHHHHHHHhC------CCCCEEEEEECC------HHHHHHHH----HHHHHcCCC
Confidence 33445689999999886444444443 234699999963 33444443 344556665
No 160
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=22.31 E-value=4.1e+02 Score=25.05 Aligned_cols=48 Identities=25% Similarity=0.306 Sum_probs=31.2
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHH
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKA 420 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~f 420 (632)
+.-.|+|+|.|.|. +...|+.+- |..++||||.. ...++.+.+++...
T Consensus 49 ~~~~vLDiGcG~G~----~~~~la~~~---~~~~v~gvD~s------~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 49 KKVTIADIGCGFGG----LMIDLSPAF---PEDLILGMEIR------VQVTNYVEDRIIAL 96 (246)
T ss_dssp CCEEEEEETCTTSH----HHHHHHHHS---TTSEEEEEESC------HHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCH----HHHHHHHhC---CCCCEEEEEcC------HHHHHHHHHHHHHH
Confidence 44689999999994 333444432 35799999963 34566666665544
No 161
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=20.90 E-value=2.9e+02 Score=25.82 Aligned_cols=32 Identities=13% Similarity=0.063 Sum_probs=22.1
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
..-+|+|+|.|.|. +...|+.+. + -++||||.
T Consensus 60 ~~~~vLDiGcGtG~----~~~~l~~~~---~-~~v~gvD~ 91 (236)
T 1zx0_A 60 KGGRVLEVGFGMAI----AASKVQEAP---I-DEHWIIEC 91 (236)
T ss_dssp TCEEEEEECCTTSH----HHHHHHTSC---E-EEEEEEEC
T ss_pred CCCeEEEEeccCCH----HHHHHHhcC---C-CeEEEEcC
Confidence 45689999999993 334455432 2 28999996
No 162
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=20.69 E-value=3e+02 Score=24.60 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=27.0
Q ss_pred CeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHH
Q 039114 360 TKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRL 417 (632)
Q Consensus 360 ~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL 417 (632)
..-+|+|+|-+.|. +...|+.+ |+. ++||||.. ...++.+.+++
T Consensus 42 ~~~~vLdiGcG~G~----~~~~l~~~--~~~--~v~~~D~s------~~~~~~a~~~~ 85 (215)
T 2pxx_A 42 PEDRILVLGCGNSA----LSYELFLG--GFP--NVTSVDYS------SVVVAAMQACY 85 (215)
T ss_dssp TTCCEEEETCTTCS----HHHHHHHT--TCC--CEEEEESC------HHHHHHHHHHT
T ss_pred CCCeEEEECCCCcH----HHHHHHHc--CCC--cEEEEeCC------HHHHHHHHHhc
Confidence 34579999999884 23344444 333 89999963 34455544443
No 163
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=20.60 E-value=5.7e+02 Score=24.79 Aligned_cols=30 Identities=10% Similarity=0.211 Sum_probs=20.4
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
-.|+|+|-|.|.- ...|+.+ |. -++||||.
T Consensus 81 ~~vLDlG~G~G~~----~~~~a~~--~~--~~v~~~D~ 110 (281)
T 3bzb_A 81 KTVCELGAGAGLV----SIVAFLA--GA--DQVVATDY 110 (281)
T ss_dssp CEEEETTCTTSHH----HHHHHHT--TC--SEEEEEEC
T ss_pred CeEEEecccccHH----HHHHHHc--CC--CEEEEEeC
Confidence 4799999998842 2245544 22 38999997
No 164
>2qn6_B Translation initiation factor 2 alpha subunit; initiation of translation, GTP-binding, nucleotide-binding, protein biosynthesis; HET: GDP; 2.15A {Sulfolobus solfataricus} SCOP: d.58.51.1 PDB: 2qmu_B* 3qsy_B*
Probab=20.53 E-value=58 Score=27.97 Aligned_cols=42 Identities=19% Similarity=0.265 Sum_probs=31.7
Q ss_pred CCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCCcEEEE
Q 039114 388 GPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNVPFEYS 431 (632)
Q Consensus 388 GPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gVpFeF~ 431 (632)
|||.-|||...+..- .-.+.|+++-..+.+..+..|.-|+|+
T Consensus 50 gaP~Y~i~~~~~D~k--~ge~~L~~ai~~i~~~i~~~gG~~~v~ 91 (93)
T 2qn6_B 50 GAPRYRVDVVGTNPK--EASEALNQIISNLIKIGKEENVDISVV 91 (93)
T ss_dssp STTEEEEEEEESCHH--HHHHHHHHHHHHHHHHHHHTTEEEEEC
T ss_pred cCCeEEEEEEecCHH--HHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 788888887754210 013478999999999999999999885
No 165
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=20.41 E-value=1.5e+02 Score=29.79 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=29.0
Q ss_pred HHHhccccCCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecC
Q 039114 351 MIGKTTEKATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIEL 399 (632)
Q Consensus 351 aILeA~~g~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~ 399 (632)
.|++++.-...-+|+|+|-|.|.-=..|.+.... ...++||||.
T Consensus 33 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~-----~~~~V~avDi 76 (279)
T 3uzu_A 33 AIVAAIRPERGERMVEIGPGLGALTGPVIARLAT-----PGSPLHAVEL 76 (279)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCB-----TTBCEEEEEC
T ss_pred HHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCC-----cCCeEEEEEC
Confidence 3555555455568999999999755555544211 1356999996
No 166
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=20.21 E-value=4.8e+02 Score=26.65 Aligned_cols=95 Identities=8% Similarity=-0.028 Sum_probs=50.0
Q ss_pred eEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-cEEEEeecccccc-
Q 039114 362 VHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-PFEYSAIAQKWET- 439 (632)
Q Consensus 362 VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-pFeF~~Ia~~~E~- 439 (632)
-.|+|+| +.|. + ...|+.+ | |..++||||.. .+.++.+.+++ +..|+ ..+| +...+.+
T Consensus 174 ~~VLDlG-G~G~-~---~~~la~~--~-~~~~v~~vDi~------~~~l~~a~~~~----~~~g~~~v~~--~~~D~~~~ 233 (373)
T 2qm3_A 174 KDIFVLG-DDDL-T---SIALMLS--G-LPKRIAVLDID------ERLTKFIEKAA----NEIGYEDIEI--FTFDLRKP 233 (373)
T ss_dssp CEEEEES-CTTC-H---HHHHHHH--T-CCSEEEEECSC------HHHHHHHHHHH----HHHTCCCEEE--ECCCTTSC
T ss_pred CEEEEEC-CCCH-H---HHHHHHh--C-CCCEEEEEECC------HHHHHHHHHHH----HHcCCCCEEE--EEChhhhh
Confidence 4799999 8874 2 2233432 2 34699999973 34455554444 44465 3444 3333333
Q ss_pred cCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCE
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDL 489 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~V 489 (632)
+.. .+. ..=.+|++|..|.... ...+|+.+ +.|+|.-
T Consensus 234 l~~-~~~-~~fD~Vi~~~p~~~~~-----------~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 234 LPD-YAL-HKFDTFITDPPETLEA-----------IRAFVGRGIATLKGPR 271 (373)
T ss_dssp CCT-TTS-SCBSEEEECCCSSHHH-----------HHHHHHHHHHTBCSTT
T ss_pred chh-hcc-CCccEEEECCCCchHH-----------HHHHHHHHHHHcccCC
Confidence 211 010 1225888887654321 14556554 6789943
No 167
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=20.15 E-value=1.4e+02 Score=28.82 Aligned_cols=49 Identities=22% Similarity=0.344 Sum_probs=32.9
Q ss_pred CCeeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHH
Q 039114 359 ATKVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKA 420 (632)
Q Consensus 359 ~~~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~f 420 (632)
.+...|+|+|.|.|. ++..||.+. |...++|||.. ...++.+.+++.+.
T Consensus 45 ~~~~~vLDiGcG~G~----~~~~la~~~---p~~~v~GiDis------~~~l~~A~~~~~~l 93 (235)
T 3ckk_A 45 QAQVEFADIGCGYGG----LLVELSPLF---PDTLILGLEIR------VKVSDYVQDRIRAL 93 (235)
T ss_dssp -CCEEEEEETCTTCH----HHHHHGGGS---TTSEEEEEESC------HHHHHHHHHHHHHH
T ss_pred CCCCeEEEEccCCcH----HHHHHHHHC---CCCeEEEEECC------HHHHHHHHHHHHHH
Confidence 456789999999993 455566653 45689999963 35566666665543
No 168
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=20.07 E-value=5.3e+02 Score=25.23 Aligned_cols=134 Identities=14% Similarity=0.165 Sum_probs=67.0
Q ss_pred eeEEEEcccccccccHHHHHHHhcCCCCCCeEEEeeecCCCCCCCChHHHHHHHHHHHHHHHhCCC-cEEEEeecccccc
Q 039114 361 KVHIIDFGISYGFQWPCFIQRQSFRPGGPPKIRITGIELPEPGFRPAERVEETGHRLKKAAERCNV-PFEYSAIAQKWET 439 (632)
Q Consensus 361 ~VHIIDfgI~~G~QWP~Liq~La~R~gGPP~LRITgI~~p~~gfrp~e~leeTGrRL~~fA~~~gV-pFeF~~Ia~~~E~ 439 (632)
.-+|+|+|.|.| .+...|+.++ |.-+||+|+.. .+.++.+.+++..++..++- .+++..-. -.+-
T Consensus 76 ~~~VLdiG~G~G----~~~~~l~~~~---~~~~v~~vEid------~~~v~~ar~~~~~~~~~~~~~rv~v~~~D-~~~~ 141 (275)
T 1iy9_A 76 PEHVLVVGGGDG----GVIREILKHP---SVKKATLVDID------GKVIEYSKKFLPSIAGKLDDPRVDVQVDD-GFMH 141 (275)
T ss_dssp CCEEEEESCTTC----HHHHHHTTCT---TCSEEEEEESC------HHHHHHHHHHCHHHHTTTTSTTEEEEESC-SHHH
T ss_pred CCEEEEECCchH----HHHHHHHhCC---CCceEEEEECC------HHHHHHHHHHhHhhccccCCCceEEEECc-HHHH
Confidence 357999999988 4555666553 45799999973 34566666666665433422 24443211 1111
Q ss_pred cCcccccCCCCceEEEEeecccCCCCCCcccccchHHHHHHHH-HhhCCCEEEEEeecCCCCCCch-HHHHHHHHHHHHH
Q 039114 440 IKLDDLKIDRDEVTVVTCMYRLNYLPDDTQVKDSLRDAVLRLI-KRINPDLFVHGVANGTYNSPFF-VSRFKEAMFHFSA 517 (632)
Q Consensus 440 l~~e~L~i~~~E~LaVN~~~~L~~L~de~v~~~spRd~vL~~I-r~L~P~Vfv~~e~n~~~nsp~F-~~RF~EAL~yYsA 517 (632)
+. .. -..=++++++..... -+.+... ...+++.+ +.|+|+-+++.... +|.+ ...+.+.+.....
T Consensus 142 l~--~~-~~~fD~Ii~d~~~~~--~~~~~l~----~~~~~~~~~~~L~pgG~lv~~~~----~~~~~~~~~~~~~~~l~~ 208 (275)
T 1iy9_A 142 IA--KS-ENQYDVIMVDSTEPV--GPAVNLF----TKGFYAGIAKALKEDGIFVAQTD----NPWFTPELITNVQRDVKE 208 (275)
T ss_dssp HH--TC-CSCEEEEEESCSSCC--SCCCCCS----TTHHHHHHHHHEEEEEEEEEECC----CTTTCHHHHHHHHHHHHT
T ss_pred Hh--hC-CCCeeEEEECCCCCC--Ccchhhh----HHHHHHHHHHhcCCCcEEEEEcC----CccccHHHHHHHHHHHHH
Confidence 11 00 012356666654311 1111100 13455554 67899977654422 2222 3445555554444
Q ss_pred HHHH
Q 039114 518 LFDM 521 (632)
Q Consensus 518 lFDs 521 (632)
+|..
T Consensus 209 ~F~~ 212 (275)
T 1iy9_A 209 IFPI 212 (275)
T ss_dssp TCSE
T ss_pred hCCC
Confidence 5543
Done!