BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 039118
         (128 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana
           GN=At4g00165 PE=2 SV=1
          Length = 128

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 3/94 (3%)

Query: 27  PSSAAEQTACSGNFMELEECVDVFRALSRQ-RTPSKNFCCSLIGNMVQLEAMGTCLCTAL 85
           P +    T C  + ++   C      +S    TP    CCSLI  +   EA   CLCTAL
Sbjct: 37  PPAKQATTKCPRDTLKFGVCGSWLGLVSEVIGTPPSQECCSLIKGLADFEA-AVCLCTAL 95

Query: 86  EDIVLDVIKREIPSASLCLLWNYCESEIPPDFQC 119
           +  +L V   +IP A L LL N C   +P  F C
Sbjct: 96  KTSILGVAPVKIPVA-LTLLLNSCGKNVPQGFVC 128


>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
          Length = 137

 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 23/139 (16%)

Query: 1   MASKGSKSKAIRLPINLMFFILLASIPS------------------SAAEQTACSGNFME 42
           M SK S S A+   +N++FF L++S                            C  + ++
Sbjct: 1   MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60

Query: 43  LEECVDVFRALSRQ--RTPSKNFCCSLIGNMVQLEAMGTCLCTALEDIVLDVIKREIPSA 100
           L  C DV   +      +P    CCSL+  +V LEA   CLCTA++  +L      +P A
Sbjct: 61  LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEA-AVCLCTAIKANILGK-NLNLPIA 118

Query: 101 SLCLLWNYCESEIPPDFQC 119
            L L+ N C  ++P  F+C
Sbjct: 119 -LSLVLNNCGKQVPNGFEC 136


>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1
          Length = 129

 Score = 38.5 bits (88), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 29  SAAEQTACSGNFMELEECVDVFRALSRQRTPSKNFCCSLIGNMVQLEAMGTCLCTALEDI 88
           S+     C  + ++L+ C  V   L +   P    CC L+  +V L+A   CLCTA++  
Sbjct: 41  SSHSHGRCPIDALKLKVCAKVL-GLVKVGLPQYEQCCPLLEGLVDLDA-ALCLCTAIKAN 98

Query: 89  VLDVIKREIPSASLCLLWNYCESEIPPDFQCIN 121
           VL  I   +P  SL  + N C    P DF C N
Sbjct: 99  VLG-IHLNVP-LSLNFILNNCGRICPEDFTCPN 129


>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1
           PE=2 SV=1
          Length = 346

 Score = 38.1 bits (87), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 33  QTACSGNFMELEECVDVFRALSRQRTP--SKNFCCSLIGNMVQLEAMGTCLCTALEDIVL 90
           Q  C  + ++L  CVDV   L        +K  CC L+G +V L+A   CLCT +   +L
Sbjct: 258 QPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDA-AICLCTTIRLKLL 316

Query: 91  DVIKREIPSASLCLLWNYCESEIPPDFQC 119
           ++    I   +L +L + C    P DF+C
Sbjct: 317 NI--NIILPIALQVLIDDCGKYPPKDFKC 343


>sp|P54861|DNM1_YEAST Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=DNM1 PE=1 SV=1
          Length = 757

 Score = 33.5 bits (75), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/27 (40%), Positives = 20/27 (74%)

Query: 87  DIVLDVIKREIPSASLCLLWNYCESEI 113
           DI+ ++I+ ++P A +CLL NYC+  +
Sbjct: 682 DIIREMIEDQVPKAVMCLLVNYCKDSV 708


>sp|P10586|PTPRF_HUMAN Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens
           GN=PTPRF PE=1 SV=2
          Length = 1907

 Score = 29.6 bits (65), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 60  SKNFCCSLIGNMVQLEAMGTCLCTALEDIVLDVIKREIPSASLCLLWNYCESE 112
           S N+ C  I ++  +EA       AL    +D++  E  + S+ L W+   SE
Sbjct: 293 SANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSE 345


>sp|A7MBJ4|PTPRF_BOVIN Receptor-type tyrosine-protein phosphatase F OS=Bos taurus GN=PTPRF
           PE=2 SV=1
          Length = 1898

 Score = 29.6 bits (65), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 60  SKNFCCSLIGNMVQLEAMGTCLCTALEDIVLDVIKREIPSASLCLLWNYCESE 112
           S N+ C  I ++  +EA       AL    +D++  E  + S+ L W+   SE
Sbjct: 293 SANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVTETTATSVTLTWDSGNSE 345


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.134    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,637,188
Number of Sequences: 539616
Number of extensions: 1539507
Number of successful extensions: 3725
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3710
Number of HSP's gapped (non-prelim): 17
length of query: 128
length of database: 191,569,459
effective HSP length: 94
effective length of query: 34
effective length of database: 140,845,555
effective search space: 4788748870
effective search space used: 4788748870
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)