Your job contains 1 sequence.
>039123
MEKYFKRKPVMPPFLEKDENEIGEQASGETFTKNEFSNWKKPKRLQERIGGPNSAHNKAM
GLTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVC
SIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTT
TISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQ
LQLAIVAMAKKHDQINSFFNVIANVINVDGPLCKR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039123
(275 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2202165 - symbol:AT1G19260 species:3702 "Arabi... 619 2.3e-66 2
TAIR|locus:4515102803 - symbol:AT2G06541 species:3702 "Ar... 557 3.3e-61 2
TAIR|locus:2829839 - symbol:AT3G29763 "AT3G29763" species... 620 1.5e-60 1
TAIR|locus:2118430 - symbol:AT4G09660 species:3702 "Arabi... 517 4.2e-55 2
TAIR|locus:2093847 - symbol:AT3G29450 "AT3G29450" species... 320 5.3e-53 2
TAIR|locus:2829849 - symbol:AT3G29765 species:3702 "Arabi... 485 3.0e-46 1
TAIR|locus:2033523 - symbol:AT1G41920 "AT1G41920" species... 469 1.5e-44 1
UNIPROTKB|E2R5I7 - symbol:ZMYM1 "Uncharacterized protein"... 264 2.1e-23 2
UNIPROTKB|Q5SW02 - symbol:ZMYM1 "Zinc finger MYM-type pro... 247 5.6e-21 2
UNIPROTKB|Q5SVZ6 - symbol:ZMYM1 "Zinc finger MYM-type pro... 247 6.8e-21 2
UNIPROTKB|E1BC73 - symbol:ZMYM1 "Uncharacterized protein"... 258 7.9e-21 1
TAIR|locus:5019474775 - symbol:AT3G31402 "AT3G31402" spec... 207 2.9e-16 1
TAIR|locus:2036700 - symbol:AT1G42710 "AT1G42710" species... 191 4.2e-15 1
RGD|1307027 - symbol:Zmym1 "zinc finger, MYM-type 1" spec... 199 6.6e-14 1
ZFIN|ZDB-GENE-060526-125 - symbol:si:ch211-240b21.2 "si:c... 178 4.0e-11 1
TAIR|locus:2124675 - symbol:AT4G10200 species:3702 "Arabi... 151 8.2e-08 1
UNIPROTKB|B4DS64 - symbol:PRKRIR "Protein-kinase, interfe... 136 3.1e-06 1
RGD|1559988 - symbol:Zbed5 "zinc finger, BED-type contain... 136 4.4e-06 1
UNIPROTKB|O43422 - symbol:PRKRIR "52 kDa repressor of the... 136 4.4e-06 1
UNIPROTKB|E2RFZ3 - symbol:PRKRIR "Uncharacterized protein... 135 5.8e-06 1
UNIPROTKB|E1BL80 - symbol:PRKRIR "Uncharacterized protein... 134 7.5e-06 1
UNIPROTKB|F1SUL6 - symbol:PRKRIR "Uncharacterized protein... 132 1.3e-05 1
RGD|1309679 - symbol:Prkrir "protein-kinase, interferon-i... 129 2.8e-05 1
UNIPROTKB|E1C7U9 - symbol:PRKRIR "Uncharacterized protein... 128 3.6e-05 1
MGI|MGI:1920231 - symbol:Prkrir "protein-kinase, interfer... 126 6.0e-05 1
UNIPROTKB|Q6R2W3 - symbol:SCAND3 "SCAN domain-containing ... 128 7.0e-05 1
TAIR|locus:504955716 - symbol:AT3G29638 "AT3G29638" speci... 120 0.00012 1
ZFIN|ZDB-GENE-030131-8276 - symbol:si:dkey-250d21.1 "si:d... 123 0.00051 2
>TAIR|locus:2202165 [details] [associations]
symbol:AT1G19260 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05699 EMBL:CP002684
GO:GO:0009506 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR006580 SMART:SM00597 IPI:IPI00526041
RefSeq:NP_173360.1 UniGene:At.70426 ProteinModelPortal:F4IE28
EnsemblPlants:AT1G19260.1 GeneID:838509 KEGG:ath:AT1G19260
OMA:ATENIAQ Uniprot:F4IE28
Length = 769
Score = 619 (223.0 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 117/222 (52%), Positives = 161/222 (72%)
Query: 54 SAHNKAMGLTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQ 113
S H GL F GH+E + S+N+GN++ L++ A NE +K+V LKNAP+NN + + IQ
Sbjct: 181 SRHLLHQGLPFRGHDESEESTNKGNFVELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQ 240
Query: 114 KDLVRVCSIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVFERFIGF 173
KD+V S E+T II ++ + +F +L+DES DAS KEQM V R+ DK G V ERFIG
Sbjct: 241 KDIVHCFSKEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGV 300
Query: 174 KHVTCTTTISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYY 233
HV T+++SLK A+D LF+KYGLS+ +L QGYDGASNM+GEFNGLR+LI+ ++ AYY
Sbjct: 301 IHVQETSSLSLKSAIDSLFAKYGLSLKKLRGQGYDGASNMKGEFNGLRSLILKESSSAYY 360
Query: 234 IHCFVHQLQLAIVAMAKKHDQINSFFNVIANVINVDGPLCKR 275
+HCF HQLQL ++A+AKKH ++ FF +I+ ++NV G CKR
Sbjct: 361 VHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKR 402
Score = 74 (31.1 bits), Expect = 2.3e-66, Sum P(2) = 2.3e-66
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 14 FLEKDENEIGEQASGETFTKNEFSNWKKPKRLQERIG-GPNSAHNKA 59
+L +D+ G Q ++F F +W K RL + +G NS HN A
Sbjct: 97 YLFRDQT--GNQGGSDSFLSTGFCSWNKADRLDQHVGLDVNSFHNNA 141
>TAIR|locus:4515102803 [details] [associations]
symbol:AT2G06541 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05699 EMBL:CP002685 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR025398 Pfam:PF14291 InterPro:IPR006580 SMART:SM00597
IPI:IPI00938992 RefSeq:NP_001154499.1 UniGene:At.53572
UniGene:At.69256 ProteinModelPortal:F4IJB0
EnsemblPlants:AT2G06541.1 GeneID:6240332 KEGG:ath:AT2G06541
OMA:YDESKES Uniprot:F4IJB0
Length = 592
Score = 557 (201.1 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 109/215 (50%), Positives = 151/215 (70%)
Query: 61 GLTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVC 120
GLTF GH+E +S+N+GN++ +++ A NE + +V L+NAP+NN ++ IQ+D+V
Sbjct: 121 GLTFRGHDESVDSANRGNFLELVKYTAGQNEVVSKVVLENAPKNNQMVCPKIQRDIVHCF 180
Query: 121 SIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTT 180
E+ II++V +F +++DES D KEQMVV R+ DK+ V ERFIG HV T
Sbjct: 181 VEEVIRSIIQEVDHDVFCLMVDESADIFDKEQMVVVFRFVDKHATVKERFIGLIHVKETF 240
Query: 181 TISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQ 240
+ LK A+D LF+K+GLSI ++ Q YDGASNM+GEFNGLR LI+ +N AYYIHCF HQ
Sbjct: 241 SAFLKCAIDSLFAKHGLSIKQIRGQDYDGASNMKGEFNGLRYLILRENSSAYYIHCFAHQ 300
Query: 241 LQLAIVAMAKKHDQINSFFNVIANVINVDGPLCKR 275
LQL +VA+AKKH +I FF++I+ +INV CKR
Sbjct: 301 LQLVVVAVAKKHFEIGDFFDMISVLINVVEASCKR 335
Score = 87 (35.7 bits), Expect = 3.3e-61, Sum P(2) = 3.3e-61
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 24 EQASG-ETFTKNEFSNWKKPKRLQERIGGPNSAHNKAMGLTFC 65
E SG +TF F WK P+ L+E +G NS HN A+ C
Sbjct: 38 ENKSGSDTFATKGFDTWKNPQSLREHVGLVNSFHNNALKRADC 80
>TAIR|locus:2829839 [details] [associations]
symbol:AT3G29763 "AT3G29763" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
HOGENOM:HOG000238438 IPI:IPI00525782 RefSeq:NP_189620.1
UniGene:At.65185 ProteinModelPortal:Q3EAW7
EnsemblPlants:AT3G29763.1 GeneID:822665 KEGG:ath:AT3G29763
TAIR:At3g29763 InParanoid:Q3EAW7 OMA:MVEICES PhylomeDB:Q3EAW7
Genevestigator:Q3EAW7 Uniprot:Q3EAW7
Length = 505
Score = 620 (223.3 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 116/222 (52%), Positives = 162/222 (72%)
Query: 54 SAHNKAMGLTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQ 113
S H GL F GH+E + S+N+GN++ L+++A NE +K+V LKNAP+NN + + IQ
Sbjct: 49 SRHLLHQGLPFRGHDESEESTNKGNFLELLKYIAGQNEVVKKVVLKNAPKNNQMTSPPIQ 108
Query: 114 KDLVRVCSIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVFERFIGF 173
KD+V S E+T II ++ + +F +L+DES DAS KEQM V R+ DK G V ERFIG
Sbjct: 109 KDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFIGV 168
Query: 174 KHVTCTTTISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYY 233
HV T+++SLK A+D LF+KYGLS+ +L +GYDGASNM+G+FNGLR+LI+ +N AYY
Sbjct: 169 IHVQETSSLSLKSAIDSLFAKYGLSLKKLRGKGYDGASNMKGKFNGLRSLILKENSSAYY 228
Query: 234 IHCFVHQLQLAIVAMAKKHDQINSFFNVIANVINVDGPLCKR 275
+HCF HQLQL ++A+AKKH ++ FF +I+ ++NV G CKR
Sbjct: 229 VHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGAFCKR 270
>TAIR|locus:2118430 [details] [associations]
symbol:AT4G09660 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AL161515 EMBL:AL049482 InterPro:IPR025398 Pfam:PF14291
eggNOG:NOG67438 InterPro:IPR006580 SMART:SM00597
HOGENOM:HOG000238438 IPI:IPI00537787 PIR:T04013 RefSeq:NP_192704.1
UniGene:At.54235 ProteinModelPortal:Q9SZ82
EnsemblPlants:AT4G09660.1 GeneID:826552 KEGG:ath:AT4G09660
TAIR:At4g09660 InParanoid:Q9SZ82 OMA:QANDANL PhylomeDB:Q9SZ82
ProtClustDB:CLSN2682451 Genevestigator:Q9SZ82 Uniprot:Q9SZ82
Length = 664
Score = 517 (187.1 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 104/218 (47%), Positives = 145/218 (66%)
Query: 20 NEIGEQASGETFTKNEFSNWKKPKRLQERIG-GPNSAHNKA---------MGLTFCGHNE 69
++ G Q ++F F +W K RL + +G NS HN A GL+F GH+E
Sbjct: 101 DQAGNQGGSDSFLSTGFCSWNKADRLDQHVGLDVNSFHNNAKRKCEDLMRQGLSFRGHDE 160
Query: 70 YDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVII 129
+ S+N+GN++ L++ A NE +K+V LKNAP+NN + + IQKD+V S E+T II
Sbjct: 161 SEESTNKGNFLELLKYTAGQNEVVKKVVLKNAPKNNQMTSPPIQKDIVHCFSEEVTRSII 220
Query: 130 RDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALD 189
++ + +F +L+DES DAS KEQM V R+ DK G V ERFIG HV T+++SLK A+D
Sbjct: 221 EEMDNDVFGLLVDESADASNKEQMTVVFRFVDKYGVVKERFIGVIHVKETSSLSLKSAID 280
Query: 190 QLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNK 227
LF+KYGLS+ +L QGYDGASNM+GEFNGLR+LI+ +
Sbjct: 281 SLFAKYGLSLKKLRGQGYDGASNMKGEFNGLRSLILKE 318
Score = 69 (29.3 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 243 LAIVAMAKKHDQINSFFNVIANVINVDGPLCKR 275
L + +AKKH ++ FF++I+ ++NV G C R
Sbjct: 314 LILKEIAKKHVEVGEFFDMISVLLNVVGASCTR 346
>TAIR|locus:2093847 [details] [associations]
symbol:AT3G29450 "AT3G29450" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 UniGene:At.53572
IPI:IPI00527525 RefSeq:NP_189591.1 ProteinModelPortal:F4J326
EnsemblPlants:AT3G29450.1 GeneID:822606 KEGG:ath:AT3G29450
OMA:ICLRILA Uniprot:F4J326
Length = 522
Score = 320 (117.7 bits), Expect = 5.3e-53, Sum P(2) = 5.3e-53
Identities = 61/93 (65%), Positives = 75/93 (80%)
Query: 183 SLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQLQ 242
SLK A+D LF+K GLSI +L QGYDGASNM+GEFNGLR+LI+ +N AYYIHCF HQLQ
Sbjct: 194 SLKCAIDSLFAKLGLSIKQLRGQGYDGASNMKGEFNGLRSLILRENSSAYYIHCFAHQLQ 253
Query: 243 LAIVAMAKKHDQINSFFNVIANVINVDGPLCKR 275
L +VA+AKKH +I FF++I+ +INV G CKR
Sbjct: 254 LVVVAVAKKHFEIGDFFDMISVLINVVGASCKR 286
Score = 254 (94.5 bits), Expect = 5.3e-53, Sum P(2) = 5.3e-53
Identities = 57/159 (35%), Positives = 89/159 (55%)
Query: 15 LEKDENEIGEQASG-ETFTKNEFSNWKKPKRLQERIGGPNSAHNKAM------------G 61
L K+ + E G +TF F WK P+ L+E +G NS HN A+ G
Sbjct: 35 LMKEMRDYTENKGGSDTFVTKGFDTWKNPQSLREHVGLVNSFHNNALKRADCLMRQVRQG 94
Query: 62 LTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCS 121
L F GH+E +S+N+ N++ +++ A NE + ++ L+NAP+NN + IQKD+V +
Sbjct: 95 LPFRGHDESVDSANRENFLELVKYTAGQNEAVSKIVLENAPKNNQMACPKIQKDIVHCFA 154
Query: 122 IEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYA 160
E+ II++V +F +++DES D S KEQM V +A
Sbjct: 155 EEVIRSIIQEVDHDVFWLMVDESADISDKEQMAVKTFFA 193
>TAIR|locus:2829849 [details] [associations]
symbol:AT3G29765 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012337 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003676 SUPFAM:SSF53098
EMBL:AB028618 InterPro:IPR025398 Pfam:PF14291 eggNOG:NOG67438
IPI:IPI00538238 RefSeq:NP_189621.1 UniGene:At.65186
ProteinModelPortal:Q3E6V3 EnsemblPlants:AT3G29765.1 GeneID:822666
KEGG:ath:AT3G29765 TAIR:At3g29765 HOGENOM:HOG000238438
InParanoid:Q3E6V3 OMA:WKEQMAV PhylomeDB:Q3E6V3
Genevestigator:Q3E6V3 Uniprot:Q3E6V3
Length = 536
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 91/164 (55%), Positives = 123/164 (75%)
Query: 112 IQKDLVRVCSIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVFERFI 171
IQKD+V S E+T II ++ + +F +L+DES DAS KEQM V R+ DK G V ERFI
Sbjct: 6 IQKDIVHCFSEEVTRSIIEEMDNDVFGLLVDESADASDKEQMAVVFRFVDKYGVVKERFI 65
Query: 172 GFKHVTCTTTISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECA 231
G HV T+++SLK A+D LF+KYGLS+ +L +GYDGASNM+G+FNGLR+LI+ +N A
Sbjct: 66 GVIHVQETSSLSLKSAIDSLFAKYGLSLKKLRGKGYDGASNMKGKFNGLRSLILKENSSA 125
Query: 232 YYIHCFVHQLQLAIVAMAKKHDQINSFFNVIANVINVDGPLCKR 275
YY+HCF HQLQL ++A+AKKH ++ FF +I+ ++NV G CKR
Sbjct: 126 YYVHCFAHQLQLVVMAVAKKHVEVGEFFYMISVLLNVVGASCKR 169
>TAIR|locus:2033523 [details] [associations]
symbol:AT1G41920 "AT1G41920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002684 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00537363
RefSeq:NP_174954.1 UniGene:At.51289 ProteinModelPortal:F4I7X4
PRIDE:F4I7X4 EnsemblPlants:AT1G41920.1 GeneID:840805
KEGG:ath:AT1G41920 OMA:DESANRG PhylomeDB:F4I7X4 Uniprot:F4I7X4
Length = 496
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 96/217 (44%), Positives = 146/217 (67%)
Query: 62 LTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCS 121
L F GH+E D S+N+GN++ +++ NE I +V L+NAP+NN ++ + + L+
Sbjct: 12 LPFRGHDESDESANRGNFLELVKYTVGQNEVISKVVLENAPKNNQMVFDEMSEPLIPETR 71
Query: 122 IEI-TNVIIRD-VGDALFSILIDES--RDASTKEQMVVALRYADKNGYVFERFIGFKHVT 177
+ ++ ++ D + D + ++ ++ + S KEQM V R+ DK+G V ERFIG HV
Sbjct: 72 DPVPSSFLLLDLILD--YPVVWQQTVQSNVSDKEQMAVVFRFVDKHGTVKERFIGLIHVK 129
Query: 178 CTTTISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCF 237
T++ SLK A+D LF+K GLS+ +L QGYDGA+NM+GEFN LR+LI+ +N AYYIHCF
Sbjct: 130 ETSSASLKCAIDSLFAKRGLSMKQLRGQGYDGANNMKGEFNWLRSLILRENSSAYYIHCF 189
Query: 238 VHQLQLAIVAMAKKHDQINSFFNVIANVINVDGPLCK 274
HQLQL +VA+AKK ++ FF++I+ ++NV G CK
Sbjct: 190 AHQLQLVVVAVAKKQFEVGDFFDMISALLNVVGASCK 226
>UNIPROTKB|E2R5I7 [details] [associations]
symbol:ZMYM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 GeneTree:ENSGT00550000074408 InterPro:IPR011017
SMART:SM00746 OMA:MEPERLN InterPro:IPR006580 SMART:SM00597
EMBL:AAEX03009659 Ensembl:ENSCAFT00000005789 Uniprot:E2R5I7
Length = 1073
Score = 264 (98.0 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 59/207 (28%), Positives = 112/207 (54%)
Query: 66 GHNEYDNSSNQGNYILTLRFLA-DHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEI 124
G+++ +S N+GN++ L A D E+I R L N+ + + + IQ D++ + E+
Sbjct: 505 GNDQSISSMNKGNFLELLEIRAKDKGEEIFR--LMNS-QVDFYNSTQIQNDIIEIIKTEM 561
Query: 125 TNVIIRDVG-DALFSILIDESRDASTKEQMVVALRYADKNG---YVFERFIGFKHVTCTT 180
I+ ++ + FSI+ DE+ D++TKEQ+ + +RY K + ERF+GF V +
Sbjct: 562 LQDIVDEINVSSAFSIICDETTDSATKEQLAIYVRYPQKMSKAILIKERFLGFIDVKEMS 621
Query: 181 TISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQ 240
L + + G+ ++++ Q YD +N++G+FN + + A YIHC+ H
Sbjct: 622 GTKLHRTIKTYLQQIGVDLNKICGQAYDSTANLRGKFNKIAAEFKKEEPRALYIHCYAHF 681
Query: 241 LQLAIVAMAKKHDQINSFFNVIANVIN 267
L LA++ K+ ++ S N ++++ N
Sbjct: 682 LDLAVIRFCKEVKELRSTLNTLSSLFN 708
Score = 45 (20.9 bits), Expect = 2.1e-23, Sum P(2) = 2.1e-23
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 28 GETFTKNEFSNWKK 41
GE+F SNWKK
Sbjct: 424 GESFAGQGISNWKK 437
>UNIPROTKB|Q5SW02 [details] [associations]
symbol:ZMYM1 "Zinc finger MYM-type protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR011017 SMART:SM00746 EMBL:AL607089
UniGene:Hs.471243 HGNC:HGNC:26253 HOGENOM:HOG000132949
HOVERGEN:HBG076163 InterPro:IPR006580 SMART:SM00597 IPI:IPI00470588
SMR:Q5SW02 STRING:Q5SW02 Ensembl:ENST00000373329 Uniprot:Q5SW02
Length = 1067
Score = 247 (92.0 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 56/207 (27%), Positives = 109/207 (52%)
Query: 66 GHNEYDNSSNQGNYILTLRFLA-DHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEI 124
G+++ +S N+GN++ L A D E+ R L N+ + + + IQ D++ + E+
Sbjct: 498 GNDQSVSSVNKGNFLELLEMRAKDKGEETFR--LMNS-QVDFYNSTQIQSDIIEIIKTEM 554
Query: 125 TNVIIRDVGDA-LFSILIDESRDASTKEQMVVALRYADKNG---YVFERFIGFKHVTCTT 180
I+ ++ D+ FSI+ DE+ +++ KEQ+ + +RY K+ + ERF+GF T
Sbjct: 555 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMT 614
Query: 181 TISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQ 240
L + + G+ + ++H Q YD +N++ +FN + + A YIHC+ H
Sbjct: 615 GTHLHRTIKTYLQQIGVDMDKIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHF 674
Query: 241 LQLAIVAMAKKHDQINSFFNVIANVIN 267
L L+I+ K+ ++ S ++++ N
Sbjct: 675 LDLSIIRFCKEVKELRSALKTLSSLFN 701
Score = 39 (18.8 bits), Expect = 5.6e-21, Sum P(2) = 5.6e-21
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 29 ETFTKNEFSNWKK 41
E+F + SNWKK
Sbjct: 418 ESFATHGTSNWKK 430
>UNIPROTKB|Q5SVZ6 [details] [associations]
symbol:ZMYM1 "Zinc finger MYM-type protein 1" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR008906 InterPro:IPR010507
InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467 GO:GO:0005634
GO:GO:0046872 EMBL:CH471059 GO:GO:0008270 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 InterPro:IPR011017
SMART:SM00746 EMBL:BX537537 EMBL:AL607089 IPI:IPI00643628
RefSeq:NP_079048.3 UniGene:Hs.471243 ProteinModelPortal:Q5SVZ6
SMR:Q5SVZ6 IntAct:Q5SVZ6 STRING:Q5SVZ6 PhosphoSite:Q5SVZ6
DMDM:74743897 PaxDb:Q5SVZ6 PRIDE:Q5SVZ6 Ensembl:ENST00000359858
Ensembl:ENST00000373330 GeneID:79830 KEGG:hsa:79830 UCSC:uc001bym.3
CTD:79830 GeneCards:GC01P035526 H-InvDB:HIX0000408 HGNC:HGNC:26253
neXtProt:NX_Q5SVZ6 PharmGKB:PA134948969 eggNOG:NOG67438
HOGENOM:HOG000132949 HOVERGEN:HBG076163 InParanoid:Q5SVZ6
OMA:MEPERLN OrthoDB:EOG4RV2QK GenomeRNAi:79830 NextBio:69469
ArrayExpress:Q5SVZ6 Bgee:Q5SVZ6 CleanEx:HS_ZMYM1
Genevestigator:Q5SVZ6 GermOnline:ENSG00000197056 InterPro:IPR006580
SMART:SM00597 Uniprot:Q5SVZ6
Length = 1142
Score = 247 (92.0 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 56/207 (27%), Positives = 109/207 (52%)
Query: 66 GHNEYDNSSNQGNYILTLRFLA-DHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEI 124
G+++ +S N+GN++ L A D E+ R L N+ + + + IQ D++ + E+
Sbjct: 573 GNDQSVSSVNKGNFLELLEMRAKDKGEETFR--LMNS-QVDFYNSTQIQSDIIEIIKTEM 629
Query: 125 TNVIIRDVGDA-LFSILIDESRDASTKEQMVVALRYADKNG---YVFERFIGFKHVTCTT 180
I+ ++ D+ FSI+ DE+ +++ KEQ+ + +RY K+ + ERF+GF T
Sbjct: 630 LQDIVNEINDSSAFSIICDETINSAMKEQLSICVRYPQKSSKAILIKERFLGFVDTEEMT 689
Query: 181 TISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQ 240
L + + G+ + ++H Q YD +N++ +FN + + A YIHC+ H
Sbjct: 690 GTHLHRTIKTYLQQIGVDMDKIHGQAYDSTTNLKIKFNKIAAEFKKEEPRALYIHCYAHF 749
Query: 241 LQLAIVAMAKKHDQINSFFNVIANVIN 267
L L+I+ K+ ++ S ++++ N
Sbjct: 750 LDLSIIRFCKEVKELRSALKTLSSLFN 776
Score = 39 (18.8 bits), Expect = 6.8e-21, Sum P(2) = 6.8e-21
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 29 ETFTKNEFSNWKK 41
E+F + SNWKK
Sbjct: 493 ESFATHGTSNWKK 505
>UNIPROTKB|E1BC73 [details] [associations]
symbol:ZMYM1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR008906 InterPro:IPR010507
InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467 GO:GO:0008270
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
GeneTree:ENSGT00550000074408 InterPro:IPR011017 SMART:SM00746
OMA:MEPERLN EMBL:DAAA02009211 IPI:IPI00688021
Ensembl:ENSBTAT00000061426 ArrayExpress:E1BC73 Uniprot:E1BC73
Length = 1130
Score = 258 (95.9 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 59/207 (28%), Positives = 108/207 (52%)
Query: 66 GHNEYDNSSNQGNYILTLRFLA-DHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEI 124
G+++ +S N+GN++ L A D E+I R L N+ + + + IQ D++ + EI
Sbjct: 563 GNDQSISSVNKGNFLELLEIRAKDKGEEIFR--LMNS-QVDFYNSTQIQNDIIEIIKTEI 619
Query: 125 TNVIIRDVG-DALFSILIDESRDASTKEQMVVALRYADKNG---YVFERFIGFKHVTCTT 180
I+ ++ + FS++ DE+ D +TK Q V +RY K + ERF+GF V T
Sbjct: 620 LQDIVNEINVSSAFSVICDETTDGATKGQFSVCVRYPQKTSKAVLIKERFLGFIDVEEMT 679
Query: 181 TISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQ 240
SL ++ + G+ ++++ Q YD SN +G+ + + A Y+HC+ H
Sbjct: 680 GTSLHRSIKAYLQQIGVDLNKIRGQAYDSTSNWKGKLKKIAAEFKKEEPRALYLHCYTHC 739
Query: 241 LQLAIVAMAKKHDQINSFFNVIANVIN 267
L LA++ K+ ++ S N ++++ N
Sbjct: 740 LDLAVIRFCKEVKELRSALNTLSSLFN 766
>TAIR|locus:5019474775 [details] [associations]
symbol:AT3G31402 "AT3G31402" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR012337 EMBL:CP002686 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 IPI:IPI00938621
RefSeq:NP_001154657.1 UniGene:At.74659 ProteinModelPortal:F4J921
EnsemblPlants:AT3G31402.1 GeneID:7922520 KEGG:ath:AT3G31402
OMA:EAMESKE Uniprot:F4J921
Length = 393
Score = 207 (77.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 45/110 (40%), Positives = 65/110 (59%)
Query: 100 NAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRY 159
+A + N + L D V ++ +I ++ +F +L+DES D S KEQM + R+
Sbjct: 65 SANKGNFVELLKYTADQNEVVKVKS---VIEEIDHNVFGLLVDESADVSDKEQMTLVFRF 121
Query: 160 ADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYGLSISRLHRQGYDG 209
DK+G V ERF+ HV T+ ISLK A+D LF+KY L+I + QGYDG
Sbjct: 122 FDKSGIVKERFLSIIHVKETSAISLKSAIDDLFAKYRLNIKKGRGQGYDG 171
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 27/81 (33%), Positives = 42/81 (51%)
Query: 23 GEQASGETFTKNEFSNWKKPKRLQERIGGPNSAHNKAM---------GLTFCGHNEYDNS 73
G+ + F + F W K E +GG +S HN + GL F GH + +NS
Sbjct: 6 GKCIRSDAFITDGFCRWNNFKSFPEHVGGVDSFHNNVVMKCENLTKQGLAFRGHYKSENS 65
Query: 74 SNQGNYILTLRFLADHNEDIK 94
+N+GN++ L++ AD NE +K
Sbjct: 66 ANKGNFVELLKYTADQNEVVK 86
>TAIR|locus:2036700 [details] [associations]
symbol:AT1G42710 "AT1G42710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR
InterPro:IPR025398 Pfam:PF14291 EMBL:AC035249 IPI:IPI00544217
RefSeq:NP_174994.1 UniGene:At.52002 ProteinModelPortal:Q9C842
EnsemblPlants:AT1G42710.1 GeneID:840883 KEGG:ath:AT1G42710
TAIR:At1g42710 PhylomeDB:Q9C842 Genevestigator:Q9C842
Uniprot:Q9C842
Length = 206
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 63/178 (35%), Positives = 90/178 (50%)
Query: 41 KPKRLQERIGGPNSAHNKAMGLTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKN 100
K +RL +G PNS+HN A+ + N NQG I+ F D + +KR +
Sbjct: 22 KHERLGTHVGKPNSSHNYAI-------EKCVNLMNQGQSIVHALFKQD--DVMKREY--H 70
Query: 101 APRNNLLIALSIQKDLVRV-CSIEITNVIIRDVGDALFSILID---ESRDASTKEQMVVA 156
P N ++ + L+R + + F L+ E DA+ EQM V
Sbjct: 71 IPLNT---SIDASRYLLRQGIAFHGHDESEESANKGNFLELVKYTGEQNDAT--EQMAVV 125
Query: 157 LRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYGLSISRLHRQGYDGASNMQ 214
R+ DK+G V ERFI HV T++ S+K A+D LF+KYGLS+ + QGYDGAS M+
Sbjct: 126 FRFVDKSGTVKERFIEVVHVKETSSASVKSAIDDLFAKYGLSLKTVRGQGYDGASIMK 183
>RGD|1307027 [details] [associations]
symbol:Zmym1 "zinc finger, MYM-type 1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR008906
InterPro:IPR010507 InterPro:IPR012337 Pfam:PF05699 Pfam:PF06467
RGD:1307027 GO:GO:0008270 GO:GO:0003676 SUPFAM:SSF53098
EMBL:CH473968 InterPro:IPR025398 Pfam:PF14291
GeneTree:ENSGT00550000074408 CTD:79830 RefSeq:NP_001101453.1
UniGene:Rn.19963 Ensembl:ENSRNOT00000064015 GeneID:313604
KEGG:rno:313604 NextBio:666535 Uniprot:G3V9X1
Length = 995
Score = 199 (75.1 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 46/206 (22%), Positives = 101/206 (49%)
Query: 66 GHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEIT 125
G+++ +S N+GN++ L A ++ R+ + + + +Q++++ + E+
Sbjct: 427 GNDQSISSINKGNFLELLEIRARDKGEVSRLMSSHI---DFYSSTLVQEEIIEIIKGEML 483
Query: 126 NVIIRDVG-DALFSILIDESRDASTKEQMVVALRYADKNG---YVFERFIGFKHVTCTTT 181
I+ ++ + FSI+ +E + + Q+ V +RYA K +V ERF+GF T
Sbjct: 484 QDIVSEINASSAFSIICEEVAGSGAERQLSVCVRYAQKLPSAVFVKERFLGFVTAEEVTG 543
Query: 182 ISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQL 241
+ + + G+ +++ Q YD A+N + + N + T + Y+HC H
Sbjct: 544 AHVHRRIKAYLQQVGVDFNKICGQAYDSATNFRVKLNEVVTEFKKEEPRVLYVHCHAHFF 603
Query: 242 QLAIVAMAKKHDQINSFFNVIANVIN 267
+LA+++ K+ ++ S N + ++ N
Sbjct: 604 ELAVLSFCKEVKELRSALNTLGSLFN 629
>ZFIN|ZDB-GENE-060526-125 [details] [associations]
symbol:si:ch211-240b21.2 "si:ch211-240b21.2"
species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05699
ZFIN:ZDB-GENE-060526-125 GO:GO:0003676 SUPFAM:SSF53098
InterPro:IPR025398 Pfam:PF14291 EMBL:BX510312 IPI:IPI00898685
Ensembl:ENSDART00000098684 GeneTree:ENSGT00660000096826
Uniprot:F1QIK1
Length = 643
Score = 178 (67.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 61/188 (32%), Positives = 95/188 (50%)
Query: 59 AMGLTFCGHNEYDNSSNQGNYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVR 118
A L GH+E ++S N G + + F+A + +K L NA + ++Q +L+
Sbjct: 107 AFELALRGHDESESSDNPGIFRGLVDFVASLDGVLKE-HLDNATVFKGT-SKTVQNELLD 164
Query: 119 VCSIEITNV-IIRDVGDALF-SILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHV 176
C + + II + + F SI DE+ D ST+ Q+V+ LRY D V +FI +
Sbjct: 165 -CMLSVVREHIIEEAQSSKFLSIQADETTDISTQCQLVLVLRYIDSKNNV--QFIPLRSS 221
Query: 177 TCTTTIS-LKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIH 235
T + + LKE L + G ++L Q YDG S M+G G++ + N A+YIH
Sbjct: 222 TADSISTVLKERLSVILP--GDQKNKLISQAYDGTSVMRGATAGVQDVYPN----AHYIH 275
Query: 236 CFVHQLQL 243
C+ HQL L
Sbjct: 276 CYAHQLNL 283
>TAIR|locus:2124675 [details] [associations]
symbol:AT4G10200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05699 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003676
SUPFAM:SSF53098 EMBL:AL049487 EMBL:AL161516 InterPro:IPR025398
Pfam:PF14291 InterPro:IPR006580 SMART:SM00597 HOGENOM:HOG000239492
IPI:IPI00537716 PIR:T04070 RefSeq:NP_192758.1 UniGene:At.54251
ProteinModelPortal:Q9SN25 PRIDE:Q9SN25 EnsemblPlants:AT4G10200.1
GeneID:826611 KEGG:ath:AT4G10200 TAIR:At4g10200 InParanoid:Q9SN25
OMA:TSETHRI ArrayExpress:Q9SN25 Genevestigator:Q9SN25
Uniprot:Q9SN25
Length = 733
Score = 151 (58.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 42/136 (30%), Positives = 71/136 (52%)
Query: 127 VIIRDVGDA-LFSILIDESRDASTKEQMVVALRYAD---KNGYVFERFIGFKHVTCTTTI 182
+II+ + +A FS+++D + D S KEQM + +R D + V E F+ F V+ +
Sbjct: 272 MIIKKIQEAKYFSVILDCTPDKSHKEQMSLIIRCVDVSMASTQVSEFFLTFVEVSDKSGE 331
Query: 183 SLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHCFVHQLQ 242
L E L L+I+ + QGYD NM+G+ G++ +++ N A+Y C H L
Sbjct: 332 GLFELLCDTLVALNLNINDVRGQGYDNGCNMKGKHKGVQKKLLDINSRAFYTPCGCHSLN 391
Query: 243 LAIVAMAKKHDQINSF 258
L + K+ + + SF
Sbjct: 392 LPS-HLKKRLNSLESF 406
>UNIPROTKB|B4DS64 [details] [associations]
symbol:PRKRIR "Protein-kinase, interferon-inducible double
stranded RNA dependent inhibitor, repressor of (P58 repressor),
isoform CRA_b" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05699 GO:GO:0005634 EMBL:CH471076
GO:GO:0003676 GO:GO:0016301 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 UniGene:Hs.503315 HGNC:HGNC:9440 HOVERGEN:HBG007908
EMBL:AP002360 EMBL:AK299594 IPI:IPI00981277 STRING:B4DS64
Ensembl:ENST00000529901 Uniprot:B4DS64
Length = 586
Score = 136 (52.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + Q+ ++ +C I +R+V D+
Sbjct: 25 NFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQMLEICESCIREETLREVRDSHF 84
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D++ + E FIGF I + + K+G
Sbjct: 85 FSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFIGFLPYEADAEILAVKFHTMITEKWG 144
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 145 LNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQAIYTLC 184
>RGD|1559988 [details] [associations]
symbol:Zbed5 "zinc finger, BED-type containing 5" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
InterPro:IPR012337 RGD:1559988 GO:GO:0005739 GO:GO:0003676
EMBL:CH473973 SUPFAM:SSF53098 GeneTree:ENSGT00680000099888
InterPro:IPR026629 PANTHER:PTHR11697:SF2 InterPro:IPR025398
Pfam:PF14291 CTD:58486 OrthoDB:EOG4XWFX9 IPI:IPI00370878
RefSeq:NP_001099394.1 UniGene:Rn.129837 Ensembl:ENSRNOT00000001220
GeneID:288622 KEGG:rno:288622 NextBio:628445 Uniprot:D3ZTR5
Length = 757
Score = 136 (52.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 46/166 (27%), Positives = 84/166 (50%)
Query: 107 LIALSIQKDLVRV----CSIEITNVIIRDVGDA---LFSILIDESRDASTKEQMVVALRY 159
L A+S+ D VR S +I + +I+++ A FSI +DES D + Q++V +RY
Sbjct: 298 LSAVSLSNDTVRRRIHDMSADILDQVIQEIKSAQLPAFSIQLDESTDVANCSQLLVYVRY 357
Query: 160 ADKNGYVFERFIGFKHVTCTTT-ISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFN 218
K+G + F+ K + TTT + + EA+ ++ +S + DGA G +
Sbjct: 358 I-KDGDFKDEFLFCKPLERTTTALDVFEAVGSFLRQHKISWESVCGVCTDGAPATLGCQS 416
Query: 219 GLRTLIMNKNECAYYIHCFVHQLQLAIVAMAKK-HDQINSFFNVIA 263
G + L++N++ A HC +H LA+ + + D + S + ++
Sbjct: 417 GFQRLVLNESPKAIGAHCMMHLQTLAMKTLPQDLQDVMKSVLSSVS 462
>UNIPROTKB|O43422 [details] [associations]
symbol:PRKRIR "52 kDa repressor of the inhibitor of the
protein kinase" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006950 "response to
stress" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0007165
GO:GO:0008285 GO:GO:0006950 GO:GO:0046872 GO:GO:0003677
EMBL:CH471076 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
EMBL:AF007393 EMBL:AF081567 EMBL:AK291843 EMBL:BC021992
EMBL:BC117138 EMBL:BC117140 EMBL:AL049970 IPI:IPI00012438
IPI:IPI00219175 RefSeq:NP_004696.2 UniGene:Hs.503315
ProteinModelPortal:O43422 SMR:O43422 IntAct:O43422 STRING:O43422
PhosphoSite:O43422 PaxDb:O43422 PRIDE:O43422 DNASU:5612
Ensembl:ENST00000260045 GeneID:5612 KEGG:hsa:5612 UCSC:uc001oxh.1
CTD:5612 GeneCards:GC11M076061 HGNC:HGNC:9440 HPA:HPA008758
MIM:607374 neXtProt:NX_O43422 PharmGKB:PA33781 eggNOG:NOG145047
HOGENOM:HOG000013127 HOVERGEN:HBG007908 InParanoid:O43422
OMA:TNVRWNN OrthoDB:EOG4TMR1D PhylomeDB:O43422 GenomeRNAi:5612
NextBio:21814 ArrayExpress:O43422 Bgee:O43422 CleanEx:HS_PRKRIR
Genevestigator:O43422 GermOnline:ENSG00000137492 Uniprot:O43422
Length = 761
Score = 136 (52.9 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + Q+ ++ +C I +R+V D+
Sbjct: 200 NFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQMLEICESCIREETLREVRDSHF 259
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D++ + E FIGF I + + K+G
Sbjct: 260 FSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFIGFLPYEADAEILAVKFHTMITEKWG 319
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 320 LNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQAIYTLC 359
>UNIPROTKB|E2RFZ3 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 CTD:5612
OMA:TNVRWNN GeneTree:ENSGT00530000063516 EMBL:AAEX03012795
EMBL:AAEX03012794 RefSeq:XP_542300.2 Ensembl:ENSCAFT00000008506
GeneID:485182 KEGG:cfa:485182 Uniprot:E2RFZ3
Length = 762
Score = 135 (52.6 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + QK ++ +C I +R+V D+
Sbjct: 201 NFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQKQMLEICESCIREETLREVRDSHF 260
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D++ + E F+GF I + + K+G
Sbjct: 261 FSIITDDVVDIAGEEHLPVLVRFVDESHNLREEFLGFLPYEADAEILAVKFHTTITEKWG 320
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 321 LNMEYCRGQAYIVSSGFSSKMKIVASRLLEKYPQAVYTLC 360
>UNIPROTKB|E1BL80 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 OMA:TNVRWNN
GeneTree:ENSGT00530000063516 EMBL:DAAA02041098 IPI:IPI00722867
UniGene:Bt.61650 Ensembl:ENSBTAT00000044810 NextBio:20868765
Uniprot:E1BL80
Length = 762
Score = 134 (52.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 37/160 (23%), Positives = 71/160 (44%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + QK ++ +C I +R+V D+
Sbjct: 201 NFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQKQMLEICESCIREETLREVRDSHF 260
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D+ + E F+GF I + + K+G
Sbjct: 261 FSIITDDVVDIAGEEHLPVLVRFVDEAHNLREEFVGFLPYEADAEILAVKFHTTITEKWG 320
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 321 LNMEYCRGQAYVVSSGFSSKMKVVASRLLEKYPQAIYTLC 360
>UNIPROTKB|F1SUL6 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 OMA:TNVRWNN
GeneTree:ENSGT00530000063516 EMBL:CU928935 EMBL:CU942407
Ensembl:ENSSSCT00000016218 Uniprot:F1SUL6
Length = 762
Score = 132 (51.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/160 (22%), Positives = 71/160 (44%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + QK ++ +C + +R+V D+
Sbjct: 201 NFQALLECRINAGEEVLRKRFETTAVNTLFCSKTQQKQMLEICESCVREETLREVRDSHF 260
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D+ + E F+GF I + + K+G
Sbjct: 261 FSIITDDVVDIAGEEHLPVLVRFVDEAHNLREEFVGFLPYEADAEILAVKFHTTITEKWG 320
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 321 LNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQAIYTLC 360
>RGD|1309679 [details] [associations]
symbol:Prkrir "protein-kinase, interferon-inducible double
stranded RNA dependent inhibitor, repressor of (P58 repressor)"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR006612 InterPro:IPR008906 InterPro:IPR012337
Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950 SMART:SM00692
SMART:SM00980 RGD:1309679 GO:GO:0005634 GO:GO:0003676
SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291 CTD:5612
OMA:TNVRWNN OrthoDB:EOG4TMR1D GeneTree:ENSGT00530000063516
IPI:IPI00368448 RefSeq:NP_001178559.1 UniGene:Rn.161856
Ensembl:ENSRNOT00000021228 GeneID:308845 KEGG:rno:308845
UCSC:RGD:1309679 NextBio:659641 Uniprot:D4AD80
Length = 757
Score = 129 (50.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 36/160 (22%), Positives = 70/160 (43%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + Q+ ++ +C I +R+V D+
Sbjct: 196 NFQALLECRINSGEEVLRKRFETTAVNTLFCSKTQQRQMLEICESCIREETLREVRDSHF 255
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D + E F+GF I + + K+G
Sbjct: 256 FSIITDDVVDIAGEEHLPVLVRFVDDAHNLREEFVGFLPYEADAEILAVKFHTTITEKWG 315
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 316 LNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQAVYTLC 355
>UNIPROTKB|E1C7U9 [details] [associations]
symbol:PRKRIR "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR006612
InterPro:IPR008906 InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699
PROSITE:PS50950 SMART:SM00692 SMART:SM00980 GO:GO:0005634
GO:GO:0003676 SUPFAM:SSF53098 InterPro:IPR025398 Pfam:PF14291
CTD:5612 GeneTree:ENSGT00530000063516 EMBL:AADN02059359
EMBL:AADN02059360 IPI:IPI00679733 RefSeq:XP_425679.2
UniGene:Gga.56114 Ensembl:ENSGALT00000001229 GeneID:428122
KEGG:gga:428122 OMA:TRAFGRN NextBio:20829190 Uniprot:E1C7U9
Length = 767
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 38/160 (23%), Positives = 71/160 (44%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + + +++ R + N + + QK ++ +C I +R+V D+
Sbjct: 201 NFQALLEYRINAGDEVLRKRFEMTAVNLEYCSKTQQKQMLEICESCIREETLREVRDSHF 260
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ DE D + +E + V +R+ D + + E FIGF I + + K+G
Sbjct: 261 FSIVTDEVVDIAGEEHLPVLVRFVDDSHNLREEFIGFLPYEADPEILAVKFHTTITEKWG 320
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + T ++ K A Y C
Sbjct: 321 LNMEYCRGQAYIVSSGFASKMKVVATRLLEKYPQAVYTLC 360
>MGI|MGI:1920231 [details] [associations]
symbol:Prkrir "protein-kinase, interferon-inducible double
stranded RNA dependent inhibitor, repressor of (P58 repressor)"
species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR006612 InterPro:IPR008906
InterPro:IPR012337 Pfam:PF05485 Pfam:PF05699 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 MGI:MGI:1920231 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 SUPFAM:SSF53098 InterPro:IPR025398
Pfam:PF14291 CTD:5612 eggNOG:NOG145047 HOGENOM:HOG000013127
HOVERGEN:HBG007908 OMA:TNVRWNN OrthoDB:EOG4TMR1D EMBL:BC049103
EMBL:AK013663 IPI:IPI00137952 RefSeq:NP_082686.1 UniGene:Mm.4428
ProteinModelPortal:Q9CUX1 SMR:Q9CUX1 STRING:Q9CUX1
PhosphoSite:Q9CUX1 PRIDE:Q9CUX1 Ensembl:ENSMUST00000033009
GeneID:72981 KEGG:mmu:72981 UCSC:uc009ikt.1
GeneTree:ENSGT00530000063516 InParanoid:Q9CUX1 ChiTaRS:PRKRIR
NextBio:337269 Bgee:Q9CUX1 Genevestigator:Q9CUX1
GermOnline:ENSMUSG00000030753 Uniprot:Q9CUX1
Length = 758
Score = 126 (49.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 36/160 (22%), Positives = 70/160 (43%)
Query: 78 NYILTLRFLADHNEDIKRVTLKNAPRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-L 136
N+ L + E++ R + N L + + Q+ ++ +C I +R+V D+
Sbjct: 196 NFQALLECRINSGEEVLRKRFEATAVNTLFCSKTQQRHMLEICESCIREETLREVRDSHF 255
Query: 137 FSILIDESRDASTKEQMVVALRYADKNGYVFERFIGFKHVTCTTTISLKEALDQLFSKYG 196
FSI+ D+ D + +E + V +R+ D + E F+GF I + + K+G
Sbjct: 256 FSIITDDVVDIAGEEHLPVLVRFVDDAHNLREEFVGFLPYEADAEILAVKFHTTITEKWG 315
Query: 197 LSISRLHRQGYDGASNMQGEFNGLRTLIMNKNECAYYIHC 236
L++ Q Y +S + + + ++ K A Y C
Sbjct: 316 LNMEYCRGQAYIVSSGFSSKMKVVASRLLEKYPQAVYTLC 355
>UNIPROTKB|Q6R2W3 [details] [associations]
symbol:SCAND3 "SCAN domain-containing protein 3"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0015074 "DNA integration" evidence=IEA]
[GO:0016032 "viral reproduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR001584
InterPro:IPR003309 InterPro:IPR008906 InterPro:IPR008916
InterPro:IPR012337 Pfam:PF02023 Pfam:PF05699 PROSITE:PS50804
PROSITE:PS50994 SMART:SM00431 GO:GO:0005634 GO:GO:0016032
GO:GO:0003700 GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0015074
eggNOG:NOG45135 InterPro:IPR025398 Pfam:PF14291 SUPFAM:SSF47353
EMBL:AY517631 EMBL:AL671879 EMBL:BX647791 EMBL:BC110834
EMBL:BC111741 EMBL:BC111742 EMBL:AK056369 EMBL:AB067512
EMBL:AL713690 IPI:IPI00646555 RefSeq:NP_443155.1 UniGene:Hs.176980
ProteinModelPortal:Q6R2W3 SMR:Q6R2W3 STRING:Q6R2W3
PhosphoSite:Q6R2W3 DMDM:74710067 PaxDb:Q6R2W3 PRIDE:Q6R2W3
DNASU:114821 Ensembl:ENST00000452236 GeneID:114821 KEGG:hsa:114821
UCSC:uc003nlo.3 CTD:114821 GeneCards:GC06M028539 H-InvDB:HIX0164677
H-InvDB:HIX0166060 HGNC:HGNC:13851 HPA:HPA007246 neXtProt:NX_Q6R2W3
PharmGKB:PA162402460 HOGENOM:HOG000154270 InParanoid:Q6R2W3
OMA:HRNSLNI OrthoDB:EOG4C5CHJ PhylomeDB:Q6R2W3 GenomeRNAi:114821
NextBio:79298 ArrayExpress:Q6R2W3 Bgee:Q6R2W3 Genevestigator:Q6R2W3
GermOnline:ENSG00000197202 Uniprot:Q6R2W3
Length = 1325
Score = 128 (50.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 50/169 (29%), Positives = 81/169 (47%)
Query: 102 PRNNLLIALSIQKDLVRVCSIEITNVIIRDVGDA-LFSILIDESRDASTKEQMVVALRYA 160
P +N IA IQ +L ++ + +I + A FS+ +DE RD + ++V +R+
Sbjct: 868 PLSNDTIARRIQ-ELAN----DMEDQLIEQIKLAKYFSLQLDECRDIANMIILLVYVRFE 922
Query: 161 DKNGYVFERFIGFKHVTCTTTISLKEAL-DQLFSKYGLSISRLHRQGYDGASNMQGEFNG 219
+ E F T TT+ L EA+ + + +K GL DGA++M G+ +
Sbjct: 923 HDDDIKEEFFFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFCVGVCSDGAASMTGKHSE 982
Query: 220 LRTLIMN-KNECAYYIHCFVHQLQLAIVAMAKKHDQINSFFNVIANVIN 267
+ T I EC HCF+H+ LA M K ++NS N I ++N
Sbjct: 983 VVTQIKELAPECKT-THCFIHRESLA---MKKISAELNSVLNDIVKIVN 1027
>TAIR|locus:504955716 [details] [associations]
symbol:AT3G29638 "AT3G29638" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 IPI:IPI00540382 RefSeq:NP_683609.1
UniGene:At.53576 ProteinModelPortal:F4J480 PRIDE:F4J480
EnsemblPlants:AT3G29638.1 GeneID:822636 KEGG:ath:AT3G29638
Uniprot:F4J480
Length = 412
Score = 120 (47.3 bits), Expect = 0.00012, P = 0.00012
Identities = 31/98 (31%), Positives = 47/98 (47%)
Query: 168 ERFIGFKHVTCTTTISLKEALDQL----FSKYGLSISRLHRQGYDGASNMQGEFNGLRTL 223
E F F +T +KE L +L F L I + QGYD SN++G+ ++
Sbjct: 124 ETFEEFDSLTQEHIKRVKEGLFELLCYTFGDLKLKIDDVRGQGYDNGSNIKGKHKRVQKR 183
Query: 224 IMNKNECAYYIHCFVHQLQLAIVAMAKKHDQINSFFNV 261
+++ N A+Y C H L LA+ MAK + FF +
Sbjct: 184 LLDINSIAFYASCGCHSLNLALADMAKSSSKAILFFGI 221
>ZFIN|ZDB-GENE-030131-8276 [details] [associations]
symbol:si:dkey-250d21.1 "si:dkey-250d21.1"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006612 Pfam:PF05485 PROSITE:PS50950
SMART:SM00692 SMART:SM00980 ZFIN:ZDB-GENE-030131-8276 GO:GO:0003676
InterPro:IPR025398 Pfam:PF14291 GeneTree:ENSGT00530000063516
EMBL:AL953904 EMBL:CU467651 IPI:IPI00897908
Ensembl:ENSDART00000124166 Bgee:F1QRG5 Uniprot:F1QRG5
Length = 2547
Score = 123 (48.4 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 32/129 (24%), Positives = 56/129 (43%)
Query: 108 IALSIQKDLVRVCSIEITNVIIRDVGDALFSILIDESRDASTKEQMVVALRYADKNGYVF 167
+ S ++++VC + + I+ +VG A FS+ ID E + V +R+ D +
Sbjct: 807 VTRSEMNEVLKVCEDVVRDRILSEVGTAFFSLFIDRVILFGEMEYLPVFIRFVDSFDVMR 866
Query: 168 ERFIGFKHVTCTTTISLKEALDQLFSKYGLSISRLHRQGYDGASNMQGEFNGLRTLIMNK 227
+GF VT T + + L +++ L +S Q Y G+ + + I K
Sbjct: 867 LELLGFVEVTNDTEAMCEHIYNVLTTEWHLDLSYCRGQAYLGSGELSYKLRAFACKIQEK 926
Query: 228 NECAYYIHC 236
N A HC
Sbjct: 927 NPLALCTHC 935
Score = 47 (21.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 85 FLADHNEDIKRVTLKNAPRNNL 106
++ADHN I++ + +A NNL
Sbjct: 583 YMADHNFSIRKDKVADANLNNL 604
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 275 275 0.00079 115 3 11 22 0.47 33
33 0.40 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 603 (64 KB)
Total size of DFA: 204 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.28u 0.18s 24.46t Elapsed: 00:00:01
Total cpu time: 24.29u 0.18s 24.47t Elapsed: 00:00:01
Start: Fri May 10 10:11:35 2013 End: Fri May 10 10:11:36 2013