BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039127
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XBQ9|RGA2_SOLBU Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2
PE=1 SV=1
Length = 970
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 54/154 (35%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDK--TVNFN------------------------------ 77
V+PI+GMGG G TT A V+ND+ T +F+
Sbjct: 177 VLPILGMGGLGKTTLAQMVFNDQRVTEHFHSKIWICVSEDFDEKRLIKAIVESIEGRPLL 236
Query: 78 ----------------------FALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQG 115
LDD W E W N+R + AS + V+ TTR +
Sbjct: 237 GEMDLAPLQKKLQELLNGKRYLLVLDDVWNEDQQKWANLRAVLKVGASGASVLTTTRLEK 296
Query: 116 VASIMGTMPAYELKKLVNDNCLLIFSQHPSGTRE 149
V SIMGT+ YEL L ++C L+F Q G +E
Sbjct: 297 VGSIMGTLQPYELSNLSQEDCWLLFMQRAFGHQE 330
>sp|Q7XA40|RGA3_SOLBU Putative disease resistance protein RGA3 OS=Solanum bulbocastanum
GN=RGA3 PE=2 SV=2
Length = 992
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 53/146 (36%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF------------------------------- 78
V+PI+GMGG G TT A V+ND+ + +F
Sbjct: 177 VLPILGMGGLGKTTLAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVESIEGKSLG 236
Query: 79 ----------------------ALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGV 116
LDD W E W N+R + AS + +++TTR + +
Sbjct: 237 DMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKI 296
Query: 117 ASIMGTMPAYELKKLVNDNCLLIFSQ 142
SIMGT+ Y+L L ++C L+F Q
Sbjct: 297 GSIMGTLQLYQLSNLSQEDCWLLFKQ 322
>sp|Q7XA42|RGA1_SOLBU Putative disease resistance protein RGA1 OS=Solanum bulbocastanum
GN=RGA1 PE=2 SV=2
Length = 979
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 53/156 (33%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTV--------------NFN------------------ 77
V+PI+GMGG G TT + V+ND+ V +FN
Sbjct: 177 VLPILGMGGLGKTTLSQMVFNDQRVTERFYPKIWICISDDFNEKRLIKAIVESIEGKSLS 236
Query: 78 ---------------------FALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGV 116
LDD W E W N+R + AS + V+ TTR + V
Sbjct: 237 DMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQHKWANLRAVLKVGASGAFVLTTTRLEKV 296
Query: 117 ASIMGTMPAYELKKLVNDNCLLIFSQHPSGTREIVH 152
SIMGT+ YEL L ++C +F Q G +E ++
Sbjct: 297 GSIMGTLQPYELSNLSPEDCWFLFMQRAFGHQEEIN 332
>sp|Q9LRR4|R13L1_ARATH Putative disease resistance RPP13-like protein 1 OS=Arabidopsis
thaliana GN=RPPL1 PE=3 SV=1
Length = 1054
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 76 FNFALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVASIMGTMPAYELKKLVNDN 135
F LDD W E + DW +R F A S+++VTTR+Q VASIM + + L+ L + +
Sbjct: 279 FLLVLDDLWNENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAVHVHNLQPLSDGD 338
Query: 136 CLLIF------SQHPSGTREI 150
C +F +Q P REI
Sbjct: 339 CWSLFMKTVFGNQEPCLNREI 359
>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS=Solanum bulbocastanum
GN=RGA4 PE=2 SV=1
Length = 988
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 56/153 (36%), Gaps = 53/153 (34%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF------------------------------- 78
V PIIGMGG G TT A ++ND+ V +F
Sbjct: 179 VFPIIGMGGLGKTTLAQMIFNDERVTKHFNPKIWVCVSDDFDEKRLIKTIIGNIERSSPH 238
Query: 79 ----------------------ALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGV 116
LDD W + W +R + A + ++ TTR + V
Sbjct: 239 VEDLASFQKKLQELLNGKRYLLVLDDVWNDDLEKWAKLRAVLTVGARGASILATTRLEKV 298
Query: 117 ASIMGTMPAYELKKLVNDNCLLIFSQHPSGTRE 149
SIMGT+ Y L L + LL+F Q G ++
Sbjct: 299 GSIMGTLQPYHLSNLSPHDSLLLFMQRAFGQQK 331
>sp|Q9LRR5|DRL21_ARATH Putative disease resistance protein At3g14460 OS=Arabidopsis
thaliana GN=At3g14460 PE=3 SV=1
Length = 1424
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 64 PALPVYNDKTVN---FNFALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVASIM 120
P+L + KT++ F LDD W E +W + + F SK+++TTR++ V+++
Sbjct: 259 PSLQIQLKKTLSGKRFLLVLDDFWSESDSEWESFQVAFTDAEEGSKIVLTTRSEIVSTVA 318
Query: 121 GTMPAYELKKLVNDNCLLIFSQHPSG 146
Y++K + N+ C + S+ G
Sbjct: 319 KAEKIYQMKLMTNEECWELISRFAFG 344
>sp|Q38834|R13L4_ARATH Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana
GN=RPP13L4 PE=2 SV=2
Length = 852
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 45 DGGFFVIPIIGMGGSGNTTPALPVYNDKTVNFNF------ALDDTWKEKYVDWTNMRDLF 98
D ++ +GMGG G TT A V+NDK + F ++ T+ E+ + + +R+L
Sbjct: 179 DSQLLIMAFVGMGGLGKTTIAQEVFNDKEIEHRFERRIWVSVSQTFTEEQIMRSILRNLG 238
Query: 99 AA 100
A
Sbjct: 239 DA 240
>sp|Q9LQ54|DRL12_ARATH Probable disease resistance protein At1g59620 OS=Arabidopsis
thaliana GN=At1g59620 PE=2 SV=3
Length = 870
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNFA------LDDTWKEKYVDWTNMR 95
V+ I GMGG G TT A V+N +TV +FA + + KYV T +R
Sbjct: 162 VVSITGMGGIGKTTLARQVFNHETVKSHFAQLAWVCVSQQFTRKYVWQTILR 213
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 79 ALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
LDD W+E+ DW + +F + KV++T+RN+GVA
Sbjct: 245 VLDDIWREE--DWDMIEPIFP-LGKGWKVLLTSRNEGVA 280
>sp|Q9M667|RPP13_ARATH Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13
PE=2 SV=2
Length = 835
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 8/44 (18%)
Query: 49 FVIPIIGMGGSGNTTPALPVYNDKTVNFNFALDDTWKEKYVDWT 92
F+I I GMGG G T A +YN + V F +Y WT
Sbjct: 186 FIISIFGMGGLGKTALARKLYNSRDVKERF--------EYRAWT 221
>sp|Q8W1E0|R1A_SOLDE Late blight resistance protein R1-A OS=Solanum demissum GN=R1A PE=3
SV=1
Length = 1293
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++R F V +RS++I+TTR+ VA
Sbjct: 652 VDDVWENSV--WDDLRGCFPDVNNRSRIILTTRHHEVA 687
>sp|Q6L3Z0|R1B13_SOLDE Putative late blight resistance protein homolog R1B-13 OS=Solanum
demissum GN=R1B-13 PE=3 SV=1
Length = 1141
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++R F V +RS++I+TTR+ VA
Sbjct: 644 VDDVWENS--AWDDLRGCFPDVNNRSRIILTTRHHEVA 679
>sp|Q6L3Z4|R1B12_SOLDE Putative late blight resistance protein homolog R1B-12 OS=Solanum
demissum GN=R1B-12 PE=3 SV=2
Length = 1348
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++R F V +RS++I+TTR+ VA
Sbjct: 675 VDDVWENS--AWDDLRGCFPDVNNRSRIILTTRHHEVA 710
>sp|Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum
demissum GN=R1A-6 PE=3 SV=2
Length = 1306
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W W ++R F V +RS++I+TTR+ VA
Sbjct: 634 VDDVWDNS--AWDDLRGCFPDVNNRSRIILTTRHHEVA 669
>sp|Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum
demissum GN=R1A-10 PE=3 SV=1
Length = 1306
Score = 33.1 bits (74), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W W ++R F V +RS++I+TTR+ VA
Sbjct: 634 VDDVWDNS--AWDDLRGCFPDVNNRSRIILTTRHHEVA 669
>sp|Q6L400|R1B16_SOLDE Putative late blight resistance protein homolog R1B-16 OS=Solanum
demissum GN=R1B-16 PE=3 SV=1
Length = 1284
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W W ++R F V +RS++I+TTR+ VA
Sbjct: 647 VDDVWDNS--AWDDLRGCFPDVNNRSRIILTTRHHEVA 682
>sp|Q6L440|R1A3_SOLDE Putative late blight resistance protein homolog R1A-3 OS=Solanum
demissum GN=R1A-3 PE=5 SV=2
Length = 775
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W W ++R F V +RS++I+TTR+ VA
Sbjct: 130 VDDVWDNSA--WDDLRGCFPDVNNRSRIILTTRHHEVA 165
>sp|Q751U7|KRE28_ASHGO Spindle pole body component KRE28 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=KRE28
PE=3 SV=2
Length = 361
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 58 GSGNTTPALPVYNDKTVNFNFALDDTWKEKYVDWTNMRDL 97
SGN P L ++K V + LD WK+++VD T +RDL
Sbjct: 246 SSGNRAPDLDA-SEKFVTYRL-LDSMWKKQFVDTTKIRDL 283
>sp|Q6L439|R1A4_SOLDE Putative late blight resistance protein homolog R1A-4 OS=Solanum
demissum GN=R1A-4 PE=5 SV=2
Length = 1244
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++R F +RS++I+TTR+ VA
Sbjct: 640 VDDVWENSV--WDDLRGCFPDANNRSRIILTTRHHEVA 675
>sp|Q6L406|R1B19_SOLDE Putative late blight resistance protein homolog R1B-19 OS=Solanum
demissum GN=R1B-19 PE=5 SV=2
Length = 1326
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++R F +RS++I+TTR+ VA
Sbjct: 650 VDDVWENSV--WDDLRGCFPDTNNRSRIILTTRHHEVA 685
>sp|Q9C8T9|DRL19_ARATH Putative disease resistance protein At1g63350 OS=Arabidopsis
thaliana GN=At1g63350 PE=2 SV=1
Length = 898
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 72 KTVNFNFALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVASIMGTMPAYELKKL 131
+ + F LDD W++ V+ + F + ++ KV+ TTR+ V + MG E++ L
Sbjct: 252 RKMRFVLFLDDIWEK--VNLVEIGVPFPTIKNKCKVVFTTRSLDVCTSMGVEKPMEVQCL 309
Query: 132 VNDNCLLIFSQ 142
+++ +F +
Sbjct: 310 ADNDAYDLFQK 320
>sp|Q9STE7|R13L3_ARATH Putative disease resistance RPP13-like protein 3 OS=Arabidopsis
thaliana GN=RPP13L3 PE=3 SV=1
Length = 847
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 30/64 (46%)
Query: 15 RQTVVPSVKLWLGREEGTVELVLKDDSETIDGGFFVIPIIGMGGSGNTTPALPVYNDKTV 74
R V +L +G E+ L++K S+ ++I I GMGG G T A +YN V
Sbjct: 152 RAPPVDQEELVVGLEDDVKILLVKLLSDNEKDKSYIISIFGMGGLGKTALARKLYNSGDV 211
Query: 75 NFNF 78
F
Sbjct: 212 KRRF 215
>sp|Q6L3Z7|R1B14_SOLDE Putative late blight resistance protein homolog R1B-14 OS=Solanum
demissum GN=R1B-14 PE=3 SV=1
Length = 1317
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W W ++R F +RS++I+TTR+ VA
Sbjct: 648 VDDVWDNS--AWDDLRGCFPDANNRSRIILTTRHHEVA 683
>sp|Q6L403|R1B17_SOLDE Putative late blight resistance protein homolog R1B-17 OS=Solanum
demissum GN=R1B-17 PE=3 SV=1
Length = 1312
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W W ++R F +RS++I+TTR+ VA
Sbjct: 648 VDDVWDNS--AWDDLRGCFPDANNRSRIILTTRHHEVA 683
>sp|Q8W474|DRL7_ARATH Probable disease resistance protein At1g58390 OS=Arabidopsis
thaliana GN=At1g58390 PE=2 SV=4
Length = 907
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF 78
V+ I GMGG G TT A V+N + V F
Sbjct: 185 VVSITGMGGLGKTTLARQVFNHEDVKHQF 213
>sp|Q3U5Q7|CMPK2_MOUSE UMP-CMP kinase 2, mitochondrial OS=Mus musculus GN=Cmpk2 PE=2 SV=2
Length = 447
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 7 AVFDDADERQTVVPSVKLWLGREEGTVELVLKDDSETIDGGFFVIPIIGMGGSGNTT 63
AVF D D + V+ ++ ++LV + E G F VI I G+ +G TT
Sbjct: 211 AVFQDRDAARAVLEECTSFIPEARAVLDLVDQCPKEVQKGKFQVIAIEGLDATGKTT 267
>sp|Q6L3N7|R1C3_SOLDE Putative late blight resistance protein homolog R1C-3 OS=Solanum
demissum GN=R1C-3 PE=3 SV=1
Length = 1292
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++ F V +RS++I+TTR+ VA
Sbjct: 618 VDDVWENSV--WDDLSGCFPDVNNRSRIILTTRHHEVA 653
>sp|Q6L3L0|R1B23_SOLDE Putative late blight resistance protein homolog R1B-23 OS=Solanum
demissum GN=R1B-23 PE=3 SV=1
Length = 1262
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 80 LDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVA 117
+DD W+ W ++ F V +RS++I+TTR+ VA
Sbjct: 588 VDDVWENSV--WDDLSGCFPDVNNRSRIILTTRHHEVA 623
>sp|P0DI16|DRL44_ARATH Probable disease resistance protein RDL5 OS=Arabidopsis thaliana
GN=RDL5 PE=1 SV=1
Length = 1017
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF 78
V+ I GMGG G TT A V+N + V F
Sbjct: 185 VVSITGMGGLGKTTLAKQVFNHEDVKHQF 213
>sp|F4IBE4|DRL10_ARATH Probable disease resistance protein RF45 OS=Arabidopsis thaliana
GN=RF45 PE=1 SV=1
Length = 1017
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF 78
V+ I GMGG G TT A V+N + V F
Sbjct: 185 VVSITGMGGLGKTTLAKQVFNHEDVKHQF 213
>sp|P0DI18|DRL45_ARATH Probable disease resistance protein RDL6 OS=Arabidopsis thaliana
GN=RDL6 PE=2 SV=1
Length = 1049
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF 78
V+ I GMGG G TT A V+N + V F
Sbjct: 185 VVSITGMGGLGKTTLAKQVFNHEDVKHQF 213
>sp|P0DI17|DRL11_ARATH Probable disease resistance protein RF9 OS=Arabidopsis thaliana
GN=RF9 PE=2 SV=1
Length = 1049
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF 78
V+ I GMGG G TT A V+N + V F
Sbjct: 185 VVSITGMGGLGKTTLAKQVFNHEDVKHQF 213
>sp|Q39214|RPM1_ARATH Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1
PE=1 SV=1
Length = 926
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 50 VIPIIGMGGSGNTTPALPVYNDKTVNFNF 78
V+ ++GMGGSG TT + ++ ++V +F
Sbjct: 195 VVAVVGMGGSGKTTLSANIFKSQSVRRHF 223
>sp|Q96JI7|SPTCS_HUMAN Spatacsin OS=Homo sapiens GN=SPG11 PE=1 SV=3
Length = 2443
Score = 30.4 bits (67), Expect = 5.4, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 51 IPIIGMGGSGNTTPALPVYNDKTVNFNFALDDTWKEK 87
+PI G G P YN K F+F +D +WK +
Sbjct: 305 LPIQGPKGVDEDDPVNSAYNMKLAKFSFQIDRSWKAQ 341
>sp|O82484|DRL23_ARATH Putative disease resistance protein At4g10780 OS=Arabidopsis
thaliana GN=At4g10780 PE=2 SV=1
Length = 892
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 76 FNFALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVASIMGTMPAYELKKLVNDN 135
F LDD WK+ VD T + ++ KV+ TTR+ V + MG E++ L ++
Sbjct: 257 FVLLLDDIWKK--VDLTKIGIPSQTRENKCKVVFTTRSLDVCARMGVHDPMEVQCLSTND 314
Query: 136 CLLIFSQ 142
+F +
Sbjct: 315 AWELFQE 321
>sp|P33781|FMS5_ECOLX CS5 fimbrial subunit OS=Escherichia coli PE=1 SV=1
Length = 203
Score = 29.6 bits (65), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
Query: 48 FFVIPIIGMGGSGNTTPALPVYNDKTVNFN 77
FF++P+ SGN TP PV D + N N
Sbjct: 84 FFIVPV-----SGNVTPGAPVTRDTSANIN 108
>sp|Q8RXS5|DRL40_ARATH Probable disease resistance protein At5g63020 OS=Arabidopsis
thaliana GN=At5g63020 PE=2 SV=2
Length = 888
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 68 VYND-KTVNFNFALDDTWKEKYVDWTNMRDLFAAVASRSKVIVTTRNQGVASIMGTMPAY 126
+YN K F LDD W + VD T + F + + K++ TTR + + MG
Sbjct: 249 IYNVLKHKRFVLLLDDIWSK--VDLTEVGVPFPSRENGCKIVFTTRLKEICGRMGVDSDM 306
Query: 127 ELKKLVNDNCLLIFSQ 142
E++ L D+ +F++
Sbjct: 307 EVRCLAPDDAWDLFTK 322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,354,396
Number of Sequences: 539616
Number of extensions: 2627068
Number of successful extensions: 5980
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 5931
Number of HSP's gapped (non-prelim): 73
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)