Query 039128
Match_columns 404
No_of_seqs 489 out of 3025
Neff 7.5
Searched_HMMs 13730
Date Mon Mar 25 10:43:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039128.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039128hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2c2la2 g.44.1.2 (A:225-304) S 99.4 4.8E-14 3.5E-18 107.8 2.3 66 193-258 5-71 (80)
2 d2c2la2 g.44.1.2 (A:225-304) S 99.4 2.4E-13 1.8E-17 103.8 5.2 66 17-83 3-69 (80)
3 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.4 8.4E-14 6.1E-18 105.9 2.5 66 193-258 6-72 (78)
4 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.3 2.8E-13 2.1E-17 104.5 4.8 56 13-69 15-70 (86)
5 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.3 4E-13 2.9E-17 102.1 5.3 67 17-84 4-71 (78)
6 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.3 1E-13 7.6E-18 111.1 1.6 56 14-69 14-70 (103)
7 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.3 1.4E-13 9.9E-18 110.4 1.7 66 193-258 19-87 (103)
8 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.3 1.5E-12 1.1E-16 103.0 5.4 63 193-257 20-83 (97)
9 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.2 9.4E-13 6.9E-17 101.6 2.5 49 193-241 21-70 (86)
10 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.2 2E-12 1.5E-16 102.3 2.7 53 13-69 14-67 (97)
11 d1fbva4 g.44.1.1 (A:356-434) C 99.2 7.5E-12 5.5E-16 95.1 5.3 50 21-71 23-72 (79)
12 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.2 6.3E-12 4.6E-16 99.5 4.6 65 194-258 21-86 (98)
13 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.1 5.9E-11 4.3E-15 93.8 7.8 70 13-84 14-85 (98)
14 d2baya1 g.44.1.2 (A:1-56) Pre- 99.1 7.9E-12 5.8E-16 88.6 2.2 46 22-69 1-47 (56)
15 d1bora_ g.44.1.1 (A:) Acute pr 99.1 1E-11 7.4E-16 87.8 2.3 45 194-241 5-49 (56)
16 d1fbva4 g.44.1.1 (A:356-434) C 99.1 2.2E-11 1.6E-15 92.4 3.0 46 196-241 24-70 (79)
17 d1bora_ g.44.1.1 (A:) Acute pr 99.1 1.1E-11 8.4E-16 87.6 1.3 45 20-69 5-49 (56)
18 d2baya1 g.44.1.2 (A:1-56) Pre- 99.0 1.1E-11 7.8E-16 87.9 0.4 46 196-241 1-47 (56)
19 d1chca_ g.44.1.1 (A:) Immediat 99.0 4.9E-11 3.5E-15 87.8 2.8 47 21-69 5-52 (68)
20 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.0 8.9E-11 6.5E-15 85.6 3.4 49 20-69 2-55 (65)
21 d1chca_ g.44.1.1 (A:) Immediat 98.9 5.7E-11 4.2E-15 87.4 0.9 45 196-240 6-51 (68)
22 d1iyma_ g.44.1.1 (A:) EL5 RING 98.9 2.6E-10 1.9E-14 80.2 3.8 48 18-67 2-53 (55)
23 d1g25a_ g.44.1.1 (A:) TFIIH Ma 98.9 1.1E-10 7.8E-15 85.2 1.4 49 194-242 2-56 (65)
24 d1ur6b_ g.44.1.1 (B:) Not-4 N- 98.9 4.3E-10 3.1E-14 78.1 3.7 47 22-69 1-51 (52)
25 d1ur6b_ g.44.1.1 (B:) Not-4 N- 98.9 4.8E-10 3.5E-14 77.9 2.9 46 196-241 1-51 (52)
26 d1iyma_ g.44.1.1 (A:) EL5 RING 98.8 4.5E-10 3.3E-14 78.9 2.3 47 193-239 3-53 (55)
27 d1v87a_ g.44.1.1 (A:) Deltex p 98.6 1E-08 7.3E-13 82.8 4.2 50 20-69 24-94 (114)
28 d3dplr1 g.44.1.1 (R:19-106) RI 98.5 3.7E-08 2.7E-12 75.7 4.3 46 21-68 21-84 (88)
29 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.5 2.9E-08 2.1E-12 70.6 3.0 50 19-68 4-58 (60)
30 d1v87a_ g.44.1.1 (A:) Deltex p 98.4 3E-08 2.2E-12 79.9 2.3 47 195-241 25-94 (114)
31 d3dplr1 g.44.1.1 (R:19-106) RI 98.4 4.9E-08 3.6E-12 75.0 2.6 43 197-239 23-83 (88)
32 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.2 2.4E-07 1.8E-11 65.7 2.4 48 193-240 4-58 (60)
33 d1wima_ g.44.1.1 (A:) UbcM4-in 97.8 9.6E-06 7E-10 62.3 4.4 47 20-66 4-59 (94)
34 d1wima_ g.44.1.1 (A:) UbcM4-in 97.7 6.6E-06 4.8E-10 63.3 3.3 44 194-237 4-58 (94)
35 d2cs3a1 g.44.1.3 (A:8-87) Prot 83.8 0.21 1.6E-05 34.8 1.8 35 21-55 8-46 (80)
36 d1wila_ g.50.1.3 (A:) Hypothet 75.0 1.1 7.9E-05 32.1 3.2 45 193-238 13-76 (89)
37 d1z60a1 g.49.1.2 (A:328-386) T 73.0 1.2 8.7E-05 29.8 2.8 41 195-235 15-58 (59)
38 d2cs3a1 g.44.1.3 (A:8-87) Prot 71.1 1 7.4E-05 31.2 2.2 32 194-225 7-42 (80)
39 d2fc7a1 g.44.1.6 (A:8-76) Zinc 68.2 0.011 8.2E-07 42.0 -9.0 40 306-345 9-52 (69)
40 d1y02a2 g.50.1.1 (A:20-70) Rif 62.9 0.52 3.8E-05 30.8 -0.7 40 197-236 2-45 (51)
41 d2jnea1 g.41.18.1 (A:1-71) Hyp 60.3 0.54 3.9E-05 32.7 -1.1 40 195-239 2-41 (71)
42 d1dvpa2 g.50.1.1 (A:149-220) H 59.2 1.8 0.00013 30.1 1.6 35 15-49 7-45 (72)
43 d1f62a_ g.50.1.2 (A:) Williams 54.4 3.9 0.00028 25.9 2.6 41 197-237 2-49 (51)
44 d1wila_ g.50.1.3 (A:) Hypothet 46.7 6.7 0.00049 27.8 2.9 36 15-51 9-47 (89)
45 d2dipa1 g.44.1.6 (A:8-92) Zinc 46.5 0.1 7.3E-06 38.4 -7.3 38 306-343 19-57 (85)
46 d1weoa_ g.44.1.1 (A:) Cellulos 44.2 15 0.0011 26.0 4.5 48 21-69 16-70 (93)
47 d1ibia2 g.39.1.3 (A:145-175) C 40.0 4.4 0.00032 22.7 0.8 29 22-50 1-30 (31)
48 d1joca1 g.50.1.1 (A:1348-1411) 39.6 4.7 0.00034 27.1 1.1 31 195-225 8-42 (64)
49 d1wesa_ g.50.1.2 (A:) PHD Inhi 38.5 8.8 0.00064 26.3 2.5 48 19-67 14-66 (71)
50 d1wfha_ g.80.1.1 (A:) Zinc fin 38.3 12 0.00091 25.0 3.2 29 19-47 13-42 (64)
51 d1zbdb_ g.50.1.1 (B:) Effector 36.3 2.7 0.0002 32.3 -0.7 42 196-237 49-99 (124)
52 d1weva_ g.50.1.2 (A:) PHD fing 36.2 3.3 0.00024 29.6 -0.2 46 193-238 14-72 (88)
53 d1wfla_ g.80.1.1 (A:) Zinc fin 36.0 15 0.0011 25.3 3.4 27 20-46 24-51 (74)
54 d1we9a_ g.50.1.2 (A:) PHD fing 34.6 4.6 0.00033 26.9 0.4 45 194-238 5-58 (64)
55 d1vfya_ g.50.1.1 (A:) vps27p p 31.0 11 0.00077 25.4 1.9 29 21-49 5-37 (67)
56 d1mm2a_ g.50.1.2 (A:) Mi2-beta 29.8 12 0.00084 24.6 1.9 41 196-238 10-56 (61)
57 d1wffa_ g.80.1.1 (A:) ANUBL1 ( 29.6 12 0.00087 26.6 2.0 27 21-47 25-53 (85)
58 d1weoa_ g.44.1.1 (A:) Cellulos 27.4 27 0.002 24.7 3.5 48 194-241 15-70 (93)
59 d1nnqa2 g.41.5.1 (A:135-171) R 26.9 13 0.00096 22.1 1.5 11 58-68 21-31 (37)
60 d2adra2 g.37.1.1 (A:131-161) A 26.3 4 0.00029 23.1 -0.9 18 373-390 11-28 (31)
61 d1fp0a1 g.50.1.2 (A:19-88) Nuc 26.2 16 0.0012 24.5 2.2 43 195-239 7-55 (70)
62 d2o35a1 a.293.1.1 (A:2-80) Hyp 25.3 12 0.00091 25.9 1.3 12 42-53 39-50 (79)
63 d2dlqa3 g.37.1.1 (A:63-92) GLI 25.2 9.9 0.00072 20.9 0.6 15 194-208 3-17 (30)
64 d2ct7a1 g.44.1.4 (A:8-80) Ring 22.6 16 0.0012 24.7 1.6 37 14-50 11-53 (73)
65 d2gmga1 a.4.5.82 (A:1-105) Hyp 21.6 23 0.0017 26.0 2.3 27 208-239 68-94 (105)
66 d1wfpa_ g.80.1.1 (A:) Zinc fin 21.3 46 0.0034 22.7 3.7 28 20-47 24-52 (74)
67 d2epqa1 g.37.1.1 (A:380-411) P 21.1 12 0.00087 20.9 0.4 13 229-241 3-15 (32)
68 d6rxna_ g.41.5.1 (A:) Rubredox 20.1 17 0.0012 22.6 1.0 16 15-30 23-38 (45)
No 1
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.38 E-value=4.8e-14 Score=107.80 Aligned_cols=66 Identities=11% Similarity=-0.016 Sum_probs=57.7
Q ss_pred ccceeeeecccCccCceecccCCcchHHhhccccc-ccCCCccCCcccCCCCCcchHHHHHHHHHHh
Q 039128 193 IVDVLCTACKQLLIHPVVLNCGHVYCETCIITPTV-QQLKCEVCQCLNPNGFPKVCLELDQFLEEQF 258 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~-~~~~CP~Cr~~~~~~~~~~~~~l~~~l~~~~ 258 (404)
-+++.|+||+++|.+||+++|||+||+.||..++. ....||.|+..+....+.+|..|+++|+++.
T Consensus 5 P~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l~pN~~L~~~I~~~l 71 (80)
T d2c2la2 5 PDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVIDAFI 71 (80)
T ss_dssp CSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHHHHH
T ss_pred CccccCcCcCchhhhhcccCCcCeecHHHHHHHHhcCCccCCCccccccccccccHHHHHHHHHHHH
Confidence 36789999999999999999999999999999864 5567999999987666788999999997654
No 2
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.36 E-value=2.4e-13 Score=103.82 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=52.0
Q ss_pred ccCCCcccccccccccCcEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCCC-CchhHHHHHHHHH
Q 039128 17 KISHSFRCCICLDLLYKPIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNHF-PSICVMLHRLLLK 83 (404)
Q Consensus 17 ~l~~~l~C~IC~~~l~~Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~~-~~~~~~l~~~l~~ 83 (404)
++.+++.||||+++|.+||+++|||+||+.||.+|+.. +...||+||.++... ...+..++..+++
T Consensus 3 eiP~~l~CpIc~~l~~dPv~~~cGhtfc~~ci~~~l~~-~~~~cP~c~~~l~~~~l~pN~~L~~~I~~ 69 (80)
T d2c2la2 3 DIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQR-VGHFNPVTRSPLTQEQLIPNLAMKEVIDA 69 (80)
T ss_dssp CCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHH-TCSSCTTTCCCCCGGGCEECHHHHHHHHH
T ss_pred CCCccccCcCcCchhhhhcccCCcCeecHHHHHHHHhc-CCccCCCccccccccccccHHHHHHHHHH
Confidence 56789999999999999999999999999999999874 445799999988642 2223444554444
No 3
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.35 E-value=8.4e-14 Score=105.89 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=58.0
Q ss_pred ccceeeeecccCccCceecccCCcchHHhhccccc-ccCCCccCCcccCCCCCcchHHHHHHHHHHh
Q 039128 193 IVDVLCTACKQLLIHPVVLNCGHVYCETCIITPTV-QQLKCEVCQCLNPNGFPKVCLELDQFLEEQF 258 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~-~~~~CP~Cr~~~~~~~~~~~~~l~~~l~~~~ 258 (404)
.+++.|+||+++|.+||+++|||+||+.||..|+. ....||.|+..+......+|..|+++|+++.
T Consensus 6 P~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l~pN~~L~~~I~~~~ 72 (78)
T d1t1ha_ 6 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWC 72 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHHHHHHH
T ss_pred CccCCCcCcCchhhCceEccCCCcchHHHHHHHHHHCCCCCCcccccCCcccccchHHHHHHHHHHH
Confidence 36789999999999999999999999999999975 4567999999987777788999999997654
No 4
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.34 E-value=2.8e-13 Score=104.54 Aligned_cols=56 Identities=34% Similarity=0.699 Sum_probs=48.3
Q ss_pred CcccccCCCcccccccccccCcEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 13 AEPEKISHSFRCCICLDLLYKPIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 13 ~~~~~l~~~l~C~IC~~~l~~Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
+..+++.+.+.|+||++++.+||+++|||+||+.||.+|+.. +...||+||.++..
T Consensus 15 d~~~d~~~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~-~~~~CP~Cr~p~~~ 70 (86)
T d1rmda2 15 DFPAHFVKSISCQICEHILADPVETSCKHLFCRICILRCLKV-MGSYCPSCRYPCFP 70 (86)
T ss_dssp CCCHHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-TCSBCTTTCCBCCG
T ss_pred cchhhhccCcCCccCCcchhcceecCCCChhhHHHHHHHHhh-CCCcCcccCCCCCh
Confidence 445667778999999999999999999999999999999864 44579999998863
No 5
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.34 E-value=4e-13 Score=102.07 Aligned_cols=67 Identities=21% Similarity=0.406 Sum_probs=53.6
Q ss_pred ccCCCcccccccccccCcEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCCCC-chhHHHHHHHHHH
Q 039128 17 KISHSFRCCICLDLLYKPIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNHFP-SICVMLHRLLLKM 84 (404)
Q Consensus 17 ~l~~~l~C~IC~~~l~~Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~~~-~~~~~l~~~l~~~ 84 (404)
++.++|.|+||+++|.+||+++|||+||+.||..|+.. +...||.|+.++.... ..+..++.+++++
T Consensus 4 eiP~~l~CpIc~~~m~dPV~~~cgh~fc~~ci~~~~~~-~~~~cP~~~~~l~~~~l~pN~~L~~~I~~~ 71 (78)
T d1t1ha_ 4 EFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDA-GHKTCPKSQETLLHAGLTPNYVLKSLIALW 71 (78)
T ss_dssp CCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHHTT-TCCBCTTTCCBCSSCCCEECTTTHHHHHHH
T ss_pred CCCccCCCcCcCchhhCceEccCCCcchHHHHHHHHHH-CCCCCCcccccCCcccccchHHHHHHHHHH
Confidence 57789999999999999999999999999999999874 4456999999987432 2234455555544
No 6
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.33 E-value=1e-13 Score=111.06 Aligned_cols=56 Identities=29% Similarity=0.766 Sum_probs=48.4
Q ss_pred cccccCCCcccccccccccCcEEccCCCcccHHHHHHhHcCC-CCCCCCCCCcCCCC
Q 039128 14 EPEKISHSFRCCICLDLLYKPIVLSCGHISCFWCVHRSMNGL-RESHCPICRRPYNH 69 (404)
Q Consensus 14 ~~~~l~~~l~C~IC~~~l~~Pv~l~CGH~fC~~Ci~~~~~~~-~~~~CP~CR~~~~~ 69 (404)
....+.+.+.|+||+++|.+||+++|||+||..||..|+... +...||+||..+..
T Consensus 14 ~~~~l~~~l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (103)
T d1jm7a_ 14 VINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (103)
T ss_dssp HHHHHHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred HHHhcccCcCCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCCh
Confidence 356667889999999999999999999999999999999754 34679999998863
No 7
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.32 E-value=1.4e-13 Score=110.37 Aligned_cols=66 Identities=21% Similarity=0.511 Sum_probs=54.5
Q ss_pred ccceeeeecccCccCceecccCCcchHHhhccccc---ccCCCccCCcccCCCCCcchHHHHHHHHHHh
Q 039128 193 IVDVLCTACKQLLIHPVVLNCGHVYCETCIITPTV---QQLKCEVCQCLNPNGFPKVCLELDQFLEEQF 258 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~---~~~~CP~Cr~~~~~~~~~~~~~l~~~l~~~~ 258 (404)
.+.+.|+||+++|.+|++++|||+||..||..|+. ....||+||..+.......|..+.++++++.
T Consensus 19 ~~~l~CpIC~~~~~~pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~ve~l~ 87 (103)
T d1jm7a_ 19 QKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELL 87 (103)
T ss_dssp HHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTCBCCCSSSHHHHHHH
T ss_pred ccCcCCCccCchhCCeEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhhCCcCHHHHHHHHHHH
Confidence 45678999999999999999999999999999853 3358999999986655667777778776553
No 8
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27 E-value=1.5e-12 Score=103.02 Aligned_cols=63 Identities=25% Similarity=0.515 Sum_probs=53.9
Q ss_pred ccceeeeecccCccCceec-ccCCcchHHhhcccccccCCCccCCcccCCCCCcchHHHHHHHHHH
Q 039128 193 IVDVLCTACKQLLIHPVVL-NCGHVYCETCIITPTVQQLKCEVCQCLNPNGFPKVCLELDQFLEEQ 257 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l-~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~l~~~ 257 (404)
.+.++|+||+++|.+|+++ +|||+||..||.+|... .||+||..+......+|..|+++++.+
T Consensus 20 ~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~--~CP~Cr~~~~~~~l~~n~~l~~lv~~~ 83 (97)
T d1jm7b_ 20 EKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGT--GCPVCYTPAWIQDLKINRQLDSMIQLC 83 (97)
T ss_dssp HHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTT--BCSSSCCBCSCSSCCCCHHHHHHHHHH
T ss_pred hhcCCCccCCchhhcCceeCCCCCchhHHHHHHHHhc--cccccCCcCchhhCcccHHHHHHHHHH
Confidence 4668999999999999976 79999999999999753 599999988666668899999988544
No 9
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.24 E-value=9.4e-13 Score=101.55 Aligned_cols=49 Identities=24% Similarity=0.658 Sum_probs=43.3
Q ss_pred ccceeeeecccCccCceecccCCcchHHhhccccc-ccCCCccCCcccCC
Q 039128 193 IVDVLCTACKQLLIHPVVLNCGHVYCETCIITPTV-QQLKCEVCQCLNPN 241 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~-~~~~CP~Cr~~~~~ 241 (404)
.+++.|+||++.+.+|++++|||+||+.||.+|+. ....||+||.++..
T Consensus 21 ~~~l~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~ 70 (86)
T d1rmda2 21 VKSISCQICEHILADPVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (86)
T ss_dssp HHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred ccCcCCccCCcchhcceecCCCChhhHHHHHHHHhhCCCcCcccCCCCCh
Confidence 35688999999999999999999999999999974 55689999998743
No 10
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20 E-value=2e-12 Score=102.27 Aligned_cols=53 Identities=32% Similarity=0.807 Sum_probs=46.3
Q ss_pred CcccccCCCcccccccccccCcEEc-cCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 13 AEPEKISHSFRCCICLDLLYKPIVL-SCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 13 ~~~~~l~~~l~C~IC~~~l~~Pv~l-~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
..++.+.+.+.|+||+++|.+||++ +|||+||..||.+|+. ..||+||..+..
T Consensus 14 ~~l~~l~~~l~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~----~~CP~Cr~~~~~ 67 (97)
T d1jm7b_ 14 AALDRLEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG----TGCPVCYTPAWI 67 (97)
T ss_dssp HHHHHHHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT----TBCSSSCCBCSC
T ss_pred HHHHhhhhcCCCccCCchhhcCceeCCCCCchhHHHHHHHHh----ccccccCCcCch
Confidence 4468888999999999999999986 7999999999999875 249999998764
No 11
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=7.5e-12 Score=95.08 Aligned_cols=50 Identities=24% Similarity=0.505 Sum_probs=43.5
Q ss_pred CcccccccccccCcEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCCCC
Q 039128 21 SFRCCICLDLLYKPIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNHFP 71 (404)
Q Consensus 21 ~l~C~IC~~~l~~Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~~~ 71 (404)
...|+||++.+.+|++++|||+||..||..|+.. +...||+||+.+....
T Consensus 23 ~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~-~~~~CP~Cr~~i~~~~ 72 (79)
T d1fbva4 23 FQLCKICAENDKDVKIEPCGHLMCTSCLTSWQES-EGQGCPFCRCEIKGTE 72 (79)
T ss_dssp TTBCTTTSSSBCCEECSSSCCEECHHHHHHHHHT-TCCSCTTTCCCCCCCC
T ss_pred CCCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHH-CcCcCCCCCcCccCCc
Confidence 3569999999999999999999999999999874 4557999999987543
No 12
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=6.3e-12 Score=99.50 Aligned_cols=65 Identities=14% Similarity=0.067 Sum_probs=58.1
Q ss_pred cceeeeecccCccCceecccC-CcchHHhhcccccccCCCccCCcccCCCCCcchHHHHHHHHHHh
Q 039128 194 VDVLCTACKQLLIHPVVLNCG-HVYCETCIITPTVQQLKCEVCQCLNPNGFPKVCLELDQFLEEQF 258 (404)
Q Consensus 194 ~~~~C~iC~~~~~~p~~l~Cg-H~fC~~Cl~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~l~~~~ 258 (404)
++|.||||+++|.+||+++|| |+||+.||.+|+.....||+|++++....+..|..|.+.|+.+.
T Consensus 21 ~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~~L~pN~~Lr~~I~~~~ 86 (98)
T d1wgma_ 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWL 86 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHHHHHHH
T ss_pred HHhCCcCchhHHHHHHhcccccchhhHHHHHHHHHhcCCcccccccccchhhcchHHHHHHHHHHH
Confidence 468999999999999999876 58999999999888889999999997777789999999996544
No 13
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.12 E-value=5.9e-11 Score=93.78 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=53.6
Q ss_pred CcccccCCCcccccccccccCcEEccCC-CcccHHHHHHhHcCCCCCCCCCCCcCCCCCC-chhHHHHHHHHHH
Q 039128 13 AEPEKISHSFRCCICLDLLYKPIVLSCG-HISCFWCVHRSMNGLRESHCPICRRPYNHFP-SICVMLHRLLLKM 84 (404)
Q Consensus 13 ~~~~~l~~~l~C~IC~~~l~~Pv~l~CG-H~fC~~Ci~~~~~~~~~~~CP~CR~~~~~~~-~~~~~l~~~l~~~ 84 (404)
....++.++|.||||+++|.+||+++|| |+||+.||..|+. ....||+|+.++.... ..+..++..++++
T Consensus 14 ~~~~~~P~~f~CPI~~~lm~dPV~~~~~~~ty~r~~I~~~l~--~~~~~P~~~~~l~~~~L~pN~~Lr~~I~~~ 85 (98)
T d1wgma_ 14 ETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLL--SDQTDPFNRSPLTMDQIRPNTELKEKIQRW 85 (98)
T ss_dssp CCCCSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTT--TSCBCTTTCSBCCTTTSEECHHHHHHHHHH
T ss_pred hhhcCCcHHhCCcCchhHHHHHHhcccccchhhHHHHHHHHH--hcCCcccccccccchhhcchHHHHHHHHHH
Confidence 4456678899999999999999999876 5899999999997 4557999999987422 2344455554443
No 14
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.11 E-value=7.9e-12 Score=88.55 Aligned_cols=46 Identities=15% Similarity=0.234 Sum_probs=40.9
Q ss_pred cccccccccccCcEEc-cCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 22 FRCCICLDLLYKPIVL-SCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 22 l~C~IC~~~l~~Pv~l-~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
+.|+||++++.+||.+ .|||+||+.||.+|+.. ...||+||+++..
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~--~~~CP~c~~~l~~ 47 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKD--TGNDPITNEPLSI 47 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHH--HSBCTTTCCBCCG
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhh--ccCCCccCCcCCH
Confidence 5799999999999987 59999999999999994 4579999998763
No 15
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10 E-value=1e-11 Score=87.84 Aligned_cols=45 Identities=27% Similarity=0.654 Sum_probs=39.7
Q ss_pred cceeeeecccCccCceecccCCcchHHhhcccccccCCCccCCcccCC
Q 039128 194 VDVLCTACKQLLIHPVVLNCGHVYCETCIITPTVQQLKCEVCQCLNPN 241 (404)
Q Consensus 194 ~~~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~~~ 241 (404)
..+.|+||++.+.+|++++|||+||..||.++ ...||+||+.++.
T Consensus 5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~~ 49 (56)
T d1bora_ 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEAS---GMQCPICQAPWPL 49 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSC
T ss_pred CCCCCcccCcccCCCEEecCCCHHhHHHHHcC---CCcCcCCCCcccC
Confidence 34689999999999999999999999999764 5679999998854
No 16
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=2.2e-11 Score=92.43 Aligned_cols=46 Identities=24% Similarity=0.638 Sum_probs=41.6
Q ss_pred eeeeecccCccCceecccCCcchHHhhccccc-ccCCCccCCcccCC
Q 039128 196 VLCTACKQLLIHPVVLNCGHVYCETCIITPTV-QQLKCEVCQCLNPN 241 (404)
Q Consensus 196 ~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~-~~~~CP~Cr~~~~~ 241 (404)
..|+||++.+.+|++++|||.||..||.+|+. ....||+||..+..
T Consensus 24 ~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~ 70 (79)
T d1fbva4 24 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKG 70 (79)
T ss_dssp TBCTTTSSSBCCEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCC
T ss_pred CCCccCCCcCCCeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccC
Confidence 46999999999999999999999999999975 56789999999854
No 17
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.07 E-value=1.1e-11 Score=87.58 Aligned_cols=45 Identities=31% Similarity=0.712 Sum_probs=39.6
Q ss_pred CCcccccccccccCcEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 20 HSFRCCICLDLLYKPIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 20 ~~l~C~IC~~~l~~Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
+.+.|+||++.+.+|++++|||+||..||.+ ....||+||+.+..
T Consensus 5 ~~l~C~IC~~~~~~p~~lpCgH~fC~~Ci~~-----~~~~CP~Cr~~~~~ 49 (56)
T d1bora_ 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-----SGMQCPICQAPWPL 49 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS-----SSSSCSSCCSSSSC
T ss_pred CCCCCcccCcccCCCEEecCCCHHhHHHHHc-----CCCcCcCCCCcccC
Confidence 4689999999999999999999999999864 35579999999874
No 18
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.05 E-value=1.1e-11 Score=87.85 Aligned_cols=46 Identities=9% Similarity=0.098 Sum_probs=41.8
Q ss_pred eeeeecccCccCceec-ccCCcchHHhhcccccccCCCccCCcccCC
Q 039128 196 VLCTACKQLLIHPVVL-NCGHVYCETCIITPTVQQLKCEVCQCLNPN 241 (404)
Q Consensus 196 ~~C~iC~~~~~~p~~l-~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~~~ 241 (404)
+.|+||++.+.+||.+ .|||+||+.||.+|+.....||+||+++..
T Consensus 1 l~C~Ic~~~~~~Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~ 47 (56)
T d2baya1 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSI 47 (56)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCG
T ss_pred CCCccCCchHHhcCccCCCCCcccHHHHHHHHhhccCCCccCCcCCH
Confidence 4699999999999987 599999999999998888899999998754
No 19
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.01 E-value=4.9e-11 Score=87.83 Aligned_cols=47 Identities=32% Similarity=0.794 Sum_probs=40.1
Q ss_pred CcccccccccccCcEE-ccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 21 SFRCCICLDLLYKPIV-LSCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 21 ~l~C~IC~~~l~~Pv~-l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
...|+||++.+.+|++ ++|||+||..||.+|+. ....||+||+++..
T Consensus 5 ~d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~--~~~~CP~CR~~i~~ 52 (68)
T d1chca_ 5 AERCPICLEDPSNYSMALPCLHAFCYVCITRWIR--QNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHH--HSCSTTTTCCCCCC
T ss_pred CCCCccCCcCccCCcEEeCCCCcCcHHHHHHHHH--hCCcCCCCCcchHh
Confidence 3569999999987755 79999999999999998 45679999998753
No 20
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=8.9e-11 Score=85.60 Aligned_cols=49 Identities=29% Similarity=0.602 Sum_probs=39.2
Q ss_pred CCccccccccccc-C----cEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 20 HSFRCCICLDLLY-K----PIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 20 ~~l~C~IC~~~l~-~----Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
++..||||++.+. . .++++|||+||..||..|+.. +...||+||+.+..
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~-~~~~CP~CR~~i~~ 55 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR-GAGNCPECGTPLRK 55 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT-TSSSCTTTCCCCSS
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCc-CcCCCCCCCcCccc
Confidence 4689999998653 2 256789999999999999864 34569999998864
No 21
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=98.94 E-value=5.7e-11 Score=87.44 Aligned_cols=45 Identities=24% Similarity=0.502 Sum_probs=40.1
Q ss_pred eeeeecccCccCcee-cccCCcchHHhhcccccccCCCccCCcccC
Q 039128 196 VLCTACKQLLIHPVV-LNCGHVYCETCIITPTVQQLKCEVCQCLNP 240 (404)
Q Consensus 196 ~~C~iC~~~~~~p~~-l~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~~ 240 (404)
-.|+||++.+.++++ ++|||+||..|+.+|+.....||+||..+.
T Consensus 6 d~C~IC~~~~~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~ 51 (68)
T d1chca_ 6 ERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCccCCcCccCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchH
Confidence 359999999988755 799999999999999888889999999864
No 22
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=98.93 E-value=2.6e-10 Score=80.17 Aligned_cols=48 Identities=31% Similarity=0.659 Sum_probs=39.7
Q ss_pred cCCCcccccccccccC---cEEc-cCCCcccHHHHHHhHcCCCCCCCCCCCcCC
Q 039128 18 ISHSFRCCICLDLLYK---PIVL-SCGHISCFWCVHRSMNGLRESHCPICRRPY 67 (404)
Q Consensus 18 l~~~l~C~IC~~~l~~---Pv~l-~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~ 67 (404)
+++...|+||++.|.. .+.+ .|||.||..||.+|+. ....||+||+.+
T Consensus 2 ~ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~--~~~~CP~CR~~i 53 (55)
T d1iyma_ 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLG--SHSTCPLCRLTV 53 (55)
T ss_dssp CCCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTT--TCCSCSSSCCCS
T ss_pred CCCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHH--hCCcCCCCCCEe
Confidence 4567889999999864 4455 5999999999999998 456799999875
No 23
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.91 E-value=1.1e-10 Score=85.15 Aligned_cols=49 Identities=29% Similarity=0.535 Sum_probs=38.8
Q ss_pred cceeeeecccCccC-c----eecccCCcchHHhhcccc-cccCCCccCCcccCCC
Q 039128 194 VDVLCTACKQLLIH-P----VVLNCGHVYCETCIITPT-VQQLKCEVCQCLNPNG 242 (404)
Q Consensus 194 ~~~~C~iC~~~~~~-p----~~l~CgH~fC~~Cl~~~~-~~~~~CP~Cr~~~~~~ 242 (404)
++..||||++.+.. + ++++|||+||..||..|+ .....||+||+.+...
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~ 56 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKS 56 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSC
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCcccc
Confidence 45789999986532 2 456899999999999996 4456899999988554
No 24
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.89 E-value=4.3e-10 Score=78.13 Aligned_cols=47 Identities=32% Similarity=0.806 Sum_probs=37.9
Q ss_pred cccccccccccC----cEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 22 FRCCICLDLLYK----PIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 22 l~C~IC~~~l~~----Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
+.|+||++.|.. ++.++|||.||..|+.+|+.. ....||+||+++..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~-~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTD-ENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTT-SCCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhh-cCCCCCccCCcCCC
Confidence 469999998743 455689999999999998874 34579999998753
No 25
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=4.8e-10 Score=77.86 Aligned_cols=46 Identities=24% Similarity=0.452 Sum_probs=37.5
Q ss_pred eeeeecccCccC----ceecccCCcchHHhhcccccc-cCCCccCCcccCC
Q 039128 196 VLCTACKQLLIH----PVVLNCGHVYCETCIITPTVQ-QLKCEVCQCLNPN 241 (404)
Q Consensus 196 ~~C~iC~~~~~~----p~~l~CgH~fC~~Cl~~~~~~-~~~CP~Cr~~~~~ 241 (404)
+.|+||++.|.. ++.++|||.||..|+.+|+.. ...||+||+++..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 479999998854 345689999999999999764 5679999998753
No 26
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=98.83 E-value=4.5e-10 Score=78.93 Aligned_cols=47 Identities=23% Similarity=0.429 Sum_probs=39.8
Q ss_pred ccceeeeecccCccCc---eec-ccCCcchHHhhcccccccCCCccCCccc
Q 039128 193 IVDVLCTACKQLLIHP---VVL-NCGHVYCETCIITPTVQQLKCEVCQCLN 239 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p---~~l-~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~ 239 (404)
+++..|+||++.|.+. +.+ +|||.||..|+.+|+.....||+||..+
T Consensus 3 ed~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i 53 (55)
T d1iyma_ 3 DDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTV 53 (55)
T ss_dssp CCSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCS
T ss_pred CCCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEe
Confidence 4566799999999753 344 5999999999999998889999999865
No 27
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.61 E-value=1e-08 Score=82.77 Aligned_cols=50 Identities=22% Similarity=0.508 Sum_probs=39.3
Q ss_pred CCcccccccccccCc------------------EEccCCCcccHHHHHHhHcCC---CCCCCCCCCcCCCC
Q 039128 20 HSFRCCICLDLLYKP------------------IVLSCGHISCFWCVHRSMNGL---RESHCPICRRPYNH 69 (404)
Q Consensus 20 ~~l~C~IC~~~l~~P------------------v~l~CGH~fC~~Ci~~~~~~~---~~~~CP~CR~~~~~ 69 (404)
.+..|+||++.|..+ +.++|||.||..||..|+... +...||+||+.+..
T Consensus 24 ~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T d1v87a_ 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred ccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhcc
Confidence 356799999987542 457899999999999999743 34579999997753
No 28
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.49 E-value=3.7e-08 Score=75.69 Aligned_cols=46 Identities=24% Similarity=0.566 Sum_probs=36.6
Q ss_pred CcccccccccccC------------------cEEccCCCcccHHHHHHhHcCCCCCCCCCCCcCCC
Q 039128 21 SFRCCICLDLLYK------------------PIVLSCGHISCFWCVHRSMNGLRESHCPICRRPYN 68 (404)
Q Consensus 21 ~l~C~IC~~~l~~------------------Pv~l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~ 68 (404)
...|+||++.+.+ ++.++|||.||..||.+|+. ....||+||+++.
T Consensus 21 ~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~--~~~~CP~CR~~~~ 84 (88)
T d3dplr1 21 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLK--TRQVCPLDNREWE 84 (88)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHT--TCSBCSSSCSBCC
T ss_pred CCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHH--HCCcCCCCCCccc
Confidence 3458999876643 34578999999999999998 4567999999864
No 29
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.47 E-value=2.9e-08 Score=70.62 Aligned_cols=50 Identities=24% Similarity=0.372 Sum_probs=41.6
Q ss_pred CCCcccccccccccCcEEccC-----CCcccHHHHHHhHcCCCCCCCCCCCcCCC
Q 039128 19 SHSFRCCICLDLLYKPIVLSC-----GHISCFWCVHRSMNGLRESHCPICRRPYN 68 (404)
Q Consensus 19 ~~~l~C~IC~~~l~~Pv~l~C-----GH~fC~~Ci~~~~~~~~~~~CP~CR~~~~ 68 (404)
.+...|+||++.+.++...+| +|.||..||..|+...+...||+||+++.
T Consensus 4 ed~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 456789999998887766554 59999999999997666778999999875
No 30
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.43 E-value=3e-08 Score=79.87 Aligned_cols=47 Identities=19% Similarity=0.554 Sum_probs=37.0
Q ss_pred ceeeeecccCccCc------------------eecccCCcchHHhhcccccc-----cCCCccCCcccCC
Q 039128 195 DVLCTACKQLLIHP------------------VVLNCGHVYCETCIITPTVQ-----QLKCEVCQCLNPN 241 (404)
Q Consensus 195 ~~~C~iC~~~~~~p------------------~~l~CgH~fC~~Cl~~~~~~-----~~~CP~Cr~~~~~ 241 (404)
+..|+||++.|.++ ..++|||.||..||..|+.. ...||+||..+..
T Consensus 25 ~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~ 94 (114)
T d1v87a_ 25 EEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGE 94 (114)
T ss_dssp SCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSS
T ss_pred cccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhcc
Confidence 34699999987643 35689999999999999642 3579999998733
No 31
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.39 E-value=4.9e-08 Score=74.99 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=35.7
Q ss_pred eeeecccCccC------------------ceecccCCcchHHhhcccccccCCCccCCccc
Q 039128 197 LCTACKQLLIH------------------PVVLNCGHVYCETCIITPTVQQLKCEVCQCLN 239 (404)
Q Consensus 197 ~C~iC~~~~~~------------------p~~l~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~ 239 (404)
.|+||++.+.+ ++.++|||.||..||.+|+.....||+||+.+
T Consensus 23 ~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~ 83 (88)
T d3dplr1 23 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREW 83 (88)
T ss_dssp CCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBC
T ss_pred cCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCcc
Confidence 47888766654 24568999999999999999889999999976
No 32
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.20 E-value=2.4e-07 Score=65.67 Aligned_cols=48 Identities=17% Similarity=0.314 Sum_probs=40.0
Q ss_pred ccceeeeecccCccCceeccc-----CCcchHHhhcccc--cccCCCccCCcccC
Q 039128 193 IVDVLCTACKQLLIHPVVLNC-----GHVYCETCIITPT--VQQLKCEVCQCLNP 240 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l~C-----gH~fC~~Cl~~~~--~~~~~CP~Cr~~~~ 240 (404)
++...|+||++.+.++...+| +|.||..||..|+ .....||+||+.+.
T Consensus 4 ed~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~ 58 (60)
T d1vyxa_ 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeee
Confidence 456789999999988877765 5999999999996 35678999999874
No 33
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76 E-value=9.6e-06 Score=62.31 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=34.9
Q ss_pred CCccccccccccc--C-cEEccCCCcccHHHHHHhHcCC------CCCCCCCCCcC
Q 039128 20 HSFRCCICLDLLY--K-PIVLSCGHISCFWCVHRSMNGL------RESHCPICRRP 66 (404)
Q Consensus 20 ~~l~C~IC~~~l~--~-Pv~l~CGH~fC~~Ci~~~~~~~------~~~~CP~CR~~ 66 (404)
....|+||++.+. + ++.++|||.||..||..|+... ....||.|.-.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C~ 59 (94)
T d1wima_ 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACP 59 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCS
T ss_pred CCCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCCC
Confidence 3467999999874 3 5566899999999999988632 22369987543
No 34
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=6.6e-06 Score=63.25 Aligned_cols=44 Identities=16% Similarity=0.480 Sum_probs=32.7
Q ss_pred cceeeeecccCccC---ceecccCCcchHHhhccccc--------ccCCCccCCc
Q 039128 194 VDVLCTACKQLLIH---PVVLNCGHVYCETCIITPTV--------QQLKCEVCQC 237 (404)
Q Consensus 194 ~~~~C~iC~~~~~~---p~~l~CgH~fC~~Cl~~~~~--------~~~~CP~Cr~ 237 (404)
....|+||++.+.. +..++|||.||..|+..++. ....||.|+-
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 44579999998753 34568999999999998742 2347998654
No 35
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.84 E-value=0.21 Score=34.80 Aligned_cols=35 Identities=29% Similarity=0.662 Sum_probs=27.8
Q ss_pred CcccccccccccCcEEccC----CCcccHHHHHHhHcCC
Q 039128 21 SFRCCICLDLLYKPIVLSC----GHISCFWCVHRSMNGL 55 (404)
Q Consensus 21 ~l~C~IC~~~l~~Pv~l~C----GH~fC~~Ci~~~~~~~ 55 (404)
.+.|.||.+.|.+--...| +|.||+-|-..+.+.+
T Consensus 8 ~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~q 46 (80)
T d2cs3a1 8 PLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKAQ 46 (80)
T ss_dssp SCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHHH
T ss_pred ceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHhc
Confidence 4899999999987644433 7999999998887743
No 36
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.02 E-value=1.1 Score=32.08 Aligned_cols=45 Identities=20% Similarity=0.628 Sum_probs=33.4
Q ss_pred ccceeeeecccCccCceecc---cCCcchHHhhccc----------------ccccCCCccCCcc
Q 039128 193 IVDVLCTACKQLLIHPVVLN---CGHVYCETCIITP----------------TVQQLKCEVCQCL 238 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~p~~l~---CgH~fC~~Cl~~~----------------~~~~~~CP~Cr~~ 238 (404)
.++.+|.|| +.+..-..+| |+.+|...|+.+. ....+.|+-|...
T Consensus 13 ~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~gyl~~e~a~e~~e~A~T~~GWSC~~C~nl 76 (89)
T d1wila_ 13 VNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNI 76 (89)
T ss_dssp CCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCC
T ss_pred CcCcccccc-CcccccceecceeecchhhHHHHHHhcccccHHHHHHHHhhcCCCCcchhhhcch
Confidence 567789999 6666555666 7899999999884 1245789999653
No 37
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.99 E-value=1.2 Score=29.84 Aligned_cols=41 Identities=24% Similarity=0.591 Sum_probs=31.6
Q ss_pred ceeeeecccCccCceec---ccCCcchHHhhcccccccCCCccC
Q 039128 195 DVLCTACKQLLIHPVVL---NCGHVYCETCIITPTVQQLKCEVC 235 (404)
Q Consensus 195 ~~~C~iC~~~~~~p~~l---~CgH~fC~~Cl~~~~~~~~~CP~C 235 (404)
...|..|...+.+.... .|++.||.+|=.=..+.-..||-|
T Consensus 15 ~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC 58 (59)
T d1z60a1 15 ERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CCCccCCCCcCCCCceEECcCCCCccccccchhhhhhhcCCCCC
Confidence 45799999888876544 589999999965445666789987
No 38
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.12 E-value=1 Score=31.23 Aligned_cols=32 Identities=25% Similarity=0.626 Sum_probs=26.5
Q ss_pred cceeeeecccCccCceeccc----CCcchHHhhccc
Q 039128 194 VDVLCTACKQLLIHPVVLNC----GHVYCETCIITP 225 (404)
Q Consensus 194 ~~~~C~iC~~~~~~p~~l~C----gH~fC~~Cl~~~ 225 (404)
..+.|.+|.+-|.+.-.+.| +|.||..|-..+
T Consensus 7 ~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~s 42 (80)
T d2cs3a1 7 GPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRES 42 (80)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHH
T ss_pred CceeeeeehhhhcCCceEeCCCCcCCceeccccHHH
Confidence 44789999999998765555 699999999876
No 39
>d2fc7a1 g.44.1.6 (A:8-76) Zinc finger ZZ-type-containing protein 3, ZZZ3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.19 E-value=0.011 Score=41.99 Aligned_cols=40 Identities=20% Similarity=0.201 Sum_probs=31.9
Q ss_pred CCccccccCCCCCCcHHHHHHHHHHHH----HHHHHHHHHhhcC
Q 039128 306 SKVHVGVGCDSCGTGQFCLALKLYLTI----TWMLLYAAYRLLD 345 (404)
Q Consensus 306 ~~~h~~v~C~~C~~~p~~~a~k~~~~~----~~~~~~~~~~~~~ 345 (404)
.-.|.++.||.|+..||....=+|..| .+.+|+.|+....
T Consensus 9 ~v~H~~~~Cd~C~~~pi~G~R~~C~~Cp~~~d~DLC~~C~~~~~ 52 (69)
T d2fc7a1 9 FVQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLH 52 (69)
T ss_dssp SCEESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCC
T ss_pred CceECCeEcCCCCCcCcCCcccCCCCCCCCCCccchHHhhcCcc
Confidence 456899999999999987655556678 6899999986553
No 40
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.86 E-value=0.52 Score=30.81 Aligned_cols=40 Identities=25% Similarity=0.630 Sum_probs=23.9
Q ss_pred eeeecccCccCce----ecccCCcchHHhhcccccccCCCccCC
Q 039128 197 LCTACKQLLIHPV----VLNCGHVYCETCIITPTVQQLKCEVCQ 236 (404)
Q Consensus 197 ~C~iC~~~~~~p~----~l~CgH~fC~~Cl~~~~~~~~~CP~Cr 236 (404)
.|.+|...|.--. --.||.+||..|..........|..|.
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C~ 45 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQ 45 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhHh
Confidence 3777777665221 126999999999866544445566663
No 41
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=60.26 E-value=0.54 Score=32.73 Aligned_cols=40 Identities=23% Similarity=0.571 Sum_probs=27.9
Q ss_pred ceeeeecccCccCceecccCCcchHHhhcccccccCCCccCCccc
Q 039128 195 DVLCTACKQLLIHPVVLNCGHVYCETCIITPTVQQLKCEVCQCLN 239 (404)
Q Consensus 195 ~~~C~iC~~~~~~p~~l~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~ 239 (404)
++.||.|...|.. .=||.+|..|-..+.. ...||.|.+++
T Consensus 2 ~~~CP~C~~eL~~----~~~~~~C~~C~~~~~~-~a~CPdC~~~L 41 (71)
T d2jnea1 2 ELHCPQCQHVLDQ----DNGHARCRSCGEFIEM-KALCPDCHQPL 41 (71)
T ss_dssp CCBCSSSCSBEEE----ETTEEEETTTCCEEEE-EEECTTTCSBC
T ss_pred CCcCCCccCcccc----cCCCEehhhhhhhhee-EEeCCccccHH
Confidence 4679999887653 1278888888766533 34599998875
No 42
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=59.23 E-value=1.8 Score=30.10 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=24.3
Q ss_pred ccccCCCcccccccccccC---cEE-ccCCCcccHHHHH
Q 039128 15 PEKISHSFRCCICLDLLYK---PIV-LSCGHISCFWCVH 49 (404)
Q Consensus 15 ~~~l~~~l~C~IC~~~l~~---Pv~-l~CGH~fC~~Ci~ 49 (404)
+..+.+.-.|.+|...|.- ... -.||++||..|..
T Consensus 7 ~p~W~~~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~ 45 (72)
T d1dvpa2 7 APNWADGRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTA 45 (72)
T ss_dssp CCCCCCCSBCTTTCCBCCSSSCCEECTTTCCEECSTTSC
T ss_pred CCCCCcCCccccCCCcccCccccccccccCCeeChhhhC
Confidence 3445556679999987642 222 4699999999964
No 43
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.39 E-value=3.9 Score=25.95 Aligned_cols=41 Identities=17% Similarity=0.510 Sum_probs=27.6
Q ss_pred eeeecccCccCceec---ccCCcchHHhhcccc----cccCCCccCCc
Q 039128 197 LCTACKQLLIHPVVL---NCGHVYCETCIITPT----VQQLKCEVCQC 237 (404)
Q Consensus 197 ~C~iC~~~~~~p~~l---~CgH~fC~~Cl~~~~----~~~~~CP~Cr~ 237 (404)
.|.||...-..-.++ .|...|...|+.... ...+.||.|+.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 467776543222222 588999999998753 35678999975
No 44
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.70 E-value=6.7 Score=27.80 Aligned_cols=36 Identities=17% Similarity=0.420 Sum_probs=26.8
Q ss_pred ccccCCCcccccccccccCcEEcc---CCCcccHHHHHHh
Q 039128 15 PEKISHSFRCCICLDLLYKPIVLS---CGHISCFWCVHRS 51 (404)
Q Consensus 15 ~~~l~~~l~C~IC~~~l~~Pv~l~---CGH~fC~~Ci~~~ 51 (404)
-+++..+..|.|| +.+..-..++ |+-+|+..|+.+.
T Consensus 9 re~v~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 9 REPVVNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCCCCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred ccCCCcCcccccc-CcccccceecceeecchhhHHHHHHh
Confidence 3566778999999 5554434444 7899999999885
No 45
>d2dipa1 g.44.1.6 (A:8-92) Zinc finger ZZ-type-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.49 E-value=0.1 Score=38.36 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=29.0
Q ss_pred CCccccccCCCCCCcHHHHHHHHHHHH-HHHHHHHHHhh
Q 039128 306 SKVHVGVGCDSCGTGQFCLALKLYLTI-TWMLLYAAYRL 343 (404)
Q Consensus 306 ~~~h~~v~C~~C~~~p~~~a~k~~~~~-~~~~~~~~~~~ 343 (404)
...|.++.|+.|+..||....=+|..| .+.+|+.|+..
T Consensus 19 ~~~H~~v~Cd~C~~~~i~G~Ry~C~~C~dyDLC~~C~~~ 57 (85)
T d2dipa1 19 LDKHLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDS 57 (85)
T ss_dssp CSSCCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHT
T ss_pred cCccCCeECCCCCCCCcCcceEEcCCCCCccchHHHHCc
Confidence 347899999999998887544445565 48899999864
No 46
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=44.18 E-value=15 Score=26.03 Aligned_cols=48 Identities=27% Similarity=0.560 Sum_probs=34.8
Q ss_pred Cccccccccccc-----CcEE--ccCCCcccHHHHHHhHcCCCCCCCCCCCcCCCC
Q 039128 21 SFRCCICLDLLY-----KPIV--LSCGHISCFWCVHRSMNGLRESHCPICRRPYNH 69 (404)
Q Consensus 21 ~l~C~IC~~~l~-----~Pv~--l~CGH~fC~~Ci~~~~~~~~~~~CP~CR~~~~~ 69 (404)
.-.|.||.+.+- ++.+ -.|+-..|+.|..--.+ .++..||.|+..+..
T Consensus 16 ~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErk-eG~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 16 GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERR-EGTQNCPQCKTRYKR 70 (93)
T ss_dssp SCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHH-TSCSSCTTTCCCCCC
T ss_pred cchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHh-ccCccCcccCChhhh
Confidence 467999998653 3332 24888999999865444 467789999998863
No 47
>d1ibia2 g.39.1.3 (A:145-175) Cysteine-rich (intestinal) protein, CRP, CRIP {Japanese quail (Coturnix coturnix japonica), CRP2 [TaxId: 93934]}
Probab=40.02 E-value=4.4 Score=22.67 Aligned_cols=29 Identities=31% Similarity=0.572 Sum_probs=21.7
Q ss_pred cccccccccccCcEE-ccCCCcccHHHHHH
Q 039128 22 FRCCICLDLLYKPIV-LSCGHISCFWCVHR 50 (404)
Q Consensus 22 l~C~IC~~~l~~Pv~-l~CGH~fC~~Ci~~ 50 (404)
++|..|..-+..-.+ -.=|-+||..|...
T Consensus 1 frca~cgk~lestt~adkdgeiyck~cyak 30 (31)
T d1ibia2 1 FRCAKCGKSLESTTLTEKEGEIYCKGCYAK 30 (31)
T ss_dssp EECSSSCCEECSSCSEEETTEEECHHHHHH
T ss_pred CccccccCccccceeeccCCcEEEeeeeec
Confidence 579999988875433 34799999999743
No 48
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.56 E-value=4.7 Score=27.10 Aligned_cols=31 Identities=26% Similarity=0.630 Sum_probs=22.0
Q ss_pred ceeeeecccCccCcee----cccCCcchHHhhccc
Q 039128 195 DVLCTACKQLLIHPVV----LNCGHVYCETCIITP 225 (404)
Q Consensus 195 ~~~C~iC~~~~~~p~~----l~CgH~fC~~Cl~~~ 225 (404)
...|.+|...|.--.. -.||++||..|....
T Consensus 8 ~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~~~ 42 (64)
T d1joca1 8 VQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAKN 42 (64)
T ss_dssp CCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred CCcCcCcCCcccCCccccchhhhCCeecccccCCc
Confidence 3469999887753211 259999999998654
No 49
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.52 E-value=8.8 Score=26.27 Aligned_cols=48 Identities=23% Similarity=0.478 Sum_probs=28.2
Q ss_pred CCCcccccccccccCcE-Ecc---CC-CcccHHHHHHhHcCCCCCCCCCCCcCC
Q 039128 19 SHSFRCCICLDLLYKPI-VLS---CG-HISCFWCVHRSMNGLRESHCPICRRPY 67 (404)
Q Consensus 19 ~~~l~C~IC~~~l~~Pv-~l~---CG-H~fC~~Ci~~~~~~~~~~~CP~CR~~~ 67 (404)
.+...| ||......-+ ... |- .-|+..|+--.........||.|+..-
T Consensus 14 ~e~~~C-iC~~~~~~~~i~c~~~~C~~~wfH~~Cvgl~~~p~~~w~C~~C~~~~ 66 (71)
T d1wesa_ 14 NEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGDS 66 (71)
T ss_dssp SSCCCS-TTCCCCCSSEECCSCTTCSCCCEETTTTTCSSCCSSCCCCTTTSSCC
T ss_pred CCCCEE-EeCCCCCCCEEEEECCCCCCcCccCccCCCCcCCCCcEECcCCcccc
Confidence 344566 9998764433 332 33 348888873211223567899997643
No 50
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=38.34 E-value=12 Score=25.05 Aligned_cols=29 Identities=21% Similarity=0.435 Sum_probs=22.6
Q ss_pred CCCccccccccccc-CcEEccCCCcccHHH
Q 039128 19 SHSFRCCICLDLLY-KPIVLSCGHISCFWC 47 (404)
Q Consensus 19 ~~~l~C~IC~~~l~-~Pv~l~CGH~fC~~C 47 (404)
....+|..|..-+. .++...||++||..-
T Consensus 13 ~k~~RC~~C~KKl~l~~~~CrCg~~FC~~H 42 (64)
T d1wfha_ 13 QRPNRCTVCRKRVGLTGFMCRCGTTFCGSH 42 (64)
T ss_dssp SSCCCCTTTCCCCCTTCEECSSSCEECTTT
T ss_pred CCCCcChhhCCCccceeeeccCCCEehhhc
Confidence 45679999998653 368889999999754
No 51
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.26 E-value=2.7 Score=32.27 Aligned_cols=42 Identities=19% Similarity=0.483 Sum_probs=26.9
Q ss_pred eeeeecccCcc---Cce--ecccCCcchHHhhcccc----cccCCCccCCc
Q 039128 196 VLCTACKQLLI---HPV--VLNCGHVYCETCIITPT----VQQLKCEVCQC 237 (404)
Q Consensus 196 ~~C~iC~~~~~---~p~--~l~CgH~fC~~Cl~~~~----~~~~~CP~Cr~ 237 (404)
-.|.+|...|. +.. -..||+.||..|-.... .....|.+|.+
T Consensus 49 ~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~~~~~~~~~~~~w~C~~C~k 99 (124)
T d1zbdb_ 49 NRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLE 99 (124)
T ss_dssp SBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHH
T ss_pred CcCcccCCcccCCCCCCCcCccCCcccccCCCCCccCCCCCCCEECccCcc
Confidence 45999988654 222 34699999999965431 23356666643
No 52
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.18 E-value=3.3 Score=29.55 Aligned_cols=46 Identities=20% Similarity=0.528 Sum_probs=31.6
Q ss_pred ccceeeeecccCccC---ceec--ccCCcchHHhhccc--------ccccCCCccCCcc
Q 039128 193 IVDVLCTACKQLLIH---PVVL--NCGHVYCETCIITP--------TVQQLKCEVCQCL 238 (404)
Q Consensus 193 ~~~~~C~iC~~~~~~---p~~l--~CgH~fC~~Cl~~~--------~~~~~~CP~Cr~~ 238 (404)
+..+.|.||...... .++. .|...|...|+... ....+.||.|...
T Consensus 14 ~~~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~ 72 (88)
T d1weva_ 14 EMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred cCcCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCch
Confidence 345779999875543 2322 68899999998753 1236789999654
No 53
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.95 E-value=15 Score=25.31 Aligned_cols=27 Identities=22% Similarity=0.504 Sum_probs=20.9
Q ss_pred CCccccccccccc-CcEEccCCCcccHH
Q 039128 20 HSFRCCICLDLLY-KPIVLSCGHISCFW 46 (404)
Q Consensus 20 ~~l~C~IC~~~l~-~Pv~l~CGH~fC~~ 46 (404)
...+|.+|..-+. .++...||++||..
T Consensus 24 k~~RC~~C~KKl~l~~~~CrCg~~FC~~ 51 (74)
T d1wfla_ 24 KKNRCFMCRKKVGLTGFDCRCGNLFCGL 51 (74)
T ss_dssp CTTBCSSSCCBCGGGCEECTTSCEECSS
T ss_pred CCCcChhhCCcccceeeEccCCCEehhh
Confidence 4579999996543 37888999999964
No 54
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=34.64 E-value=4.6 Score=26.91 Aligned_cols=45 Identities=20% Similarity=0.462 Sum_probs=31.0
Q ss_pred cceeeeecccCccCc-eec---ccCCcchHHhhccc-----ccccCCCccCCcc
Q 039128 194 VDVLCTACKQLLIHP-VVL---NCGHVYCETCIITP-----TVQQLKCEVCQCL 238 (404)
Q Consensus 194 ~~~~C~iC~~~~~~p-~~l---~CgH~fC~~Cl~~~-----~~~~~~CP~Cr~~ 238 (404)
....|.+|.+...+- ..+ .|+.-|...|+... ....+.||.|+..
T Consensus 5 ~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 455799998866443 223 58888888998653 1246899999764
No 55
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.01 E-value=11 Score=25.43 Aligned_cols=29 Identities=28% Similarity=0.367 Sum_probs=20.5
Q ss_pred CcccccccccccC---cEE-ccCCCcccHHHHH
Q 039128 21 SFRCCICLDLLYK---PIV-LSCGHISCFWCVH 49 (404)
Q Consensus 21 ~l~C~IC~~~l~~---Pv~-l~CGH~fC~~Ci~ 49 (404)
.-.|.+|...|.- .-- -.||.+||..|..
T Consensus 5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~ 37 (67)
T d1vfya_ 5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 37 (67)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CcccccCCCcccCcccccccccCCCEecccccC
Confidence 3469999987642 222 3699999999963
No 56
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.82 E-value=12 Score=24.57 Aligned_cols=41 Identities=24% Similarity=0.642 Sum_probs=28.0
Q ss_pred eeeeecccCccCceec--ccCCcchHHhhcccc----cccCCCccCCcc
Q 039128 196 VLCTACKQLLIHPVVL--NCGHVYCETCIITPT----VQQLKCEVCQCL 238 (404)
Q Consensus 196 ~~C~iC~~~~~~p~~l--~CgH~fC~~Cl~~~~----~~~~~CP~Cr~~ 238 (404)
..|.+|.+- .-++. .|.-.|+..|+.... ...+.||.|+..
T Consensus 10 ~~C~~C~~~--g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 10 EFCRVCKDG--GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCTTTCCC--SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCcCCCCC--CeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCc
Confidence 358888752 12222 688899999987542 356889999754
No 57
>d1wffa_ g.80.1.1 (A:) ANUBL1 (AN1, ubiquitin-like, homolog) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.59 E-value=12 Score=26.64 Aligned_cols=27 Identities=19% Similarity=0.320 Sum_probs=22.0
Q ss_pred Cccccccccccc--CcEEccCCCcccHHH
Q 039128 21 SFRCCICLDLLY--KPIVLSCGHISCFWC 47 (404)
Q Consensus 21 ~l~C~IC~~~l~--~Pv~l~CGH~fC~~C 47 (404)
..+|.+|..-+. .++...||+.||...
T Consensus 25 ~~RC~~C~KKl~l~~~~~CrCg~~FC~~H 53 (85)
T d1wffa_ 25 MKHCFLCGKKTGLATSFECRCGNNFCASH 53 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTTCCEECTTT
T ss_pred CCcChhcCCeecCCcCeecCCCCEehhhc
Confidence 358999998764 478899999999765
No 58
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=27.42 E-value=27 Score=24.69 Aligned_cols=48 Identities=19% Similarity=0.429 Sum_probs=33.8
Q ss_pred cceeeeecccCcc-----Ccee--cccCCcchHHhhccc-ccccCCCccCCcccCC
Q 039128 194 VDVLCTACKQLLI-----HPVV--LNCGHVYCETCIITP-TVQQLKCEVCQCLNPN 241 (404)
Q Consensus 194 ~~~~C~iC~~~~~-----~p~~--l~CgH~fC~~Cl~~~-~~~~~~CP~Cr~~~~~ 241 (404)
..-.|.||.+..- ++.+ --|+--.|+.|..=- ......||.|+..+.+
T Consensus 15 ~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr 70 (93)
T d1weoa_ 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKR 70 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCC
T ss_pred ccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhhh
Confidence 3457999988653 2222 258899999998653 4567789999988743
No 59
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=26.88 E-value=13 Score=22.09 Aligned_cols=11 Identities=36% Similarity=1.105 Sum_probs=7.7
Q ss_pred CCCCCCCcCCC
Q 039128 58 SHCPICRRPYN 68 (404)
Q Consensus 58 ~~CP~CR~~~~ 68 (404)
..||+|..+-.
T Consensus 21 ~~CPvCg~~~~ 31 (37)
T d1nnqa2 21 EYCPVCGAPKE 31 (37)
T ss_dssp SBCTTTCCBGG
T ss_pred CcCCCCCCcHH
Confidence 46999977543
No 60
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}
Probab=26.28 E-value=4 Score=23.15 Aligned_cols=18 Identities=39% Similarity=0.529 Sum_probs=15.8
Q ss_pred ccccceeeehhhhhcccc
Q 039128 373 SSRFDSLIVETQAMHGGE 390 (404)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~ 390 (404)
..|+|.|+---||+|+|.
T Consensus 11 FaRrDLlLRH~qKlH~g~ 28 (31)
T d2adra2 11 FTRRDLLIRHAQKIHSGN 28 (31)
T ss_dssp ESSHHHHHHHHTTTSCCS
T ss_pred hhHHHHHHHHHHHHhcCc
Confidence 678899999999999984
No 61
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.24 E-value=16 Score=24.53 Aligned_cols=43 Identities=19% Similarity=0.654 Sum_probs=28.8
Q ss_pred ceeeeecccCccCceec--ccCCcchHHhhcccc----cccCCCccCCccc
Q 039128 195 DVLCTACKQLLIHPVVL--NCGHVYCETCIITPT----VQQLKCEVCQCLN 239 (404)
Q Consensus 195 ~~~C~iC~~~~~~p~~l--~CgH~fC~~Cl~~~~----~~~~~CP~Cr~~~ 239 (404)
...|.+|.+. .-+++ .|...|+..|+...+ ...+.||.|+...
T Consensus 7 c~~C~~C~~~--~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 55 (70)
T d1fp0a1 7 ATICRVCQKP--GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 55 (70)
T ss_dssp SSCCSSSCSS--SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred CCCCCCCCCc--CEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcC
Confidence 3457777643 11222 688999999998642 3568899997643
No 62
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=25.30 E-value=12 Score=25.93 Aligned_cols=12 Identities=17% Similarity=0.213 Sum_probs=10.7
Q ss_pred cccHHHHHHhHc
Q 039128 42 ISCFWCVHRSMN 53 (404)
Q Consensus 42 ~fC~~Ci~~~~~ 53 (404)
-||+.|+.+|+.
T Consensus 39 GFCRNCLskWy~ 50 (79)
T d2o35a1 39 GFCRNCLSNWYR 50 (79)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999986
No 63
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.22 E-value=9.9 Score=20.86 Aligned_cols=15 Identities=13% Similarity=0.450 Sum_probs=9.3
Q ss_pred cceeeeecccCccCc
Q 039128 194 VDVLCTACKQLLIHP 208 (404)
Q Consensus 194 ~~~~C~iC~~~~~~p 208 (404)
.-++|++|.+.|...
T Consensus 3 qvftcs~cqe~f~rr 17 (30)
T d2dlqa3 3 QVFTCSVCQETFRRR 17 (30)
T ss_dssp CCEECSSSCCEESSH
T ss_pred ceEEeHHHHHHHHHH
Confidence 346677777766543
No 64
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.55 E-value=16 Score=24.74 Aligned_cols=37 Identities=14% Similarity=0.240 Sum_probs=23.6
Q ss_pred cccccCCCcccccccccccC----c-EEc-cCCCcccHHHHHH
Q 039128 14 EPEKISHSFRCCICLDLLYK----P-IVL-SCGHISCFWCVHR 50 (404)
Q Consensus 14 ~~~~l~~~l~C~IC~~~l~~----P-v~l-~CGH~fC~~Ci~~ 50 (404)
.+........||-|...+.. + ++. .||+.||..|-..
T Consensus 11 ~l~~~~~~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~ 53 (73)
T d2ct7a1 11 VLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQ 53 (73)
T ss_dssp CCCSCCCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSB
T ss_pred HHHHCCCCCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcc
Confidence 34444556789999876532 1 344 5888888877554
No 65
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=21.56 E-value=23 Score=26.03 Aligned_cols=27 Identities=19% Similarity=0.416 Sum_probs=18.0
Q ss_pred ceecccCCcchHHhhcccccccCCCccCCccc
Q 039128 208 PVVLNCGHVYCETCIITPTVQQLKCEVCQCLN 239 (404)
Q Consensus 208 p~~l~CgH~fC~~Cl~~~~~~~~~CP~Cr~~~ 239 (404)
|.-..||-+| ..-.....+||.|+..-
T Consensus 68 p~CrkCGfvF-----r~~~kkPSRCP~CKSE~ 94 (105)
T d2gmga1 68 AQCRKCGFVF-----KAEINIPSRCPKCKSEW 94 (105)
T ss_dssp CBBTTTCCBC-----CCCSSCCSSCSSSCCCC
T ss_pred hhhhhcCCee-----cccCCCCCCCCCCCCcc
Confidence 3455688877 22345567899998863
No 66
>d1wfpa_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At1g12440 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=21.29 E-value=46 Score=22.74 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=21.3
Q ss_pred CCccccccccccc-CcEEccCCCcccHHH
Q 039128 20 HSFRCCICLDLLY-KPIVLSCGHISCFWC 47 (404)
Q Consensus 20 ~~l~C~IC~~~l~-~Pv~l~CGH~fC~~C 47 (404)
...+|.+|..-+. ..+...||++||...
T Consensus 24 kk~RC~~C~KKl~l~~~~CrCg~~FC~~H 52 (74)
T d1wfpa_ 24 TATRCLSCNKKVGVTGFKCRCGSTFCGTH 52 (74)
T ss_dssp CCCBCSSSCCBCTTTCEECTTSCEECTTT
T ss_pred CCCcChhcCCccCCCceecCCCChhhhcc
Confidence 4688999997653 356778999999754
No 67
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.14 E-value=12 Score=20.91 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=8.2
Q ss_pred cCCCccCCcccCC
Q 039128 229 QLKCEVCQCLNPN 241 (404)
Q Consensus 229 ~~~CP~Cr~~~~~ 241 (404)
.+.||+|.+.+.+
T Consensus 3 p~~cpic~qrfkr 15 (32)
T d2epqa1 3 PYSCPVCGLRFKR 15 (32)
T ss_dssp SSEETTTTEECSC
T ss_pred CcccchHHHHhhc
Confidence 3567777766544
No 68
>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}
Probab=20.09 E-value=17 Score=22.58 Aligned_cols=16 Identities=13% Similarity=0.407 Sum_probs=12.8
Q ss_pred ccccCCCccccccccc
Q 039128 15 PEKISHSFRCCICLDL 30 (404)
Q Consensus 15 ~~~l~~~l~C~IC~~~ 30 (404)
-++|.+++.||+|...
T Consensus 23 Fe~LP~dw~CP~C~a~ 38 (45)
T d6rxna_ 23 FDQLPDDWCCPVCGVS 38 (45)
T ss_dssp GGGSCTTCBCTTTCCB
T ss_pred HHHCCCCCCCcCCCCc
Confidence 4678889999999753
Done!