BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039137
(912 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 221/453 (48%), Gaps = 34/453 (7%)
Query: 89 INLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQ 148
++L G + +F + L LDL N +G +PP + S LE L S+N G+
Sbjct: 271 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 149 IPSGIGL-LTHLTVLHISRNWLSGSIPHEVGQLTV-LNQLALDSNFLNGSI-PRSLGNLT 205
+P L + L VL +S N SG +P + L+ L L L SN +G I P N
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 390
Query: 206 HVVI-LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNE 264
+ + LYL NN F G IP + N L L L N LSG IP S+ +L+ LR L L+ N
Sbjct: 391 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 450
Query: 265 LSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTY 324
L G IPQE+ G +P N T+L + L+ N LTG I + G
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 510
Query: 325 PNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNY 384
NL + LSNNSF G I ++ G C L LD++ N +G+IP + + Q +++N+
Sbjct: 511 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK----QSGKIAANF 566
Query: 385 IVGEIPTQL------------GNII--------YLNRLS------LSGNKLSGCIPRELG 418
I G+ + GN++ LNRLS ++ G
Sbjct: 567 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 626
Query: 419 SLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 478
+ ++ +LD+S N LS ++P+ +GS+ L+ LNL HN +S IP E+ +L L+ LDLS
Sbjct: 627 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 686
Query: 479 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPR 511
N L +I + + L +++LS NNLSG IP
Sbjct: 687 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 229/498 (45%), Gaps = 53/498 (10%)
Query: 111 LVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLS 170
L +LD+ N+L G IS + L+ L+ S+N+ G IP L L L ++ N +
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFT 279
Query: 171 GSIPHEV-GQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQE-IGNL 228
G IP + G L L L N G++P G+ + + L L +N+F G +P + + +
Sbjct: 280 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 339
Query: 229 KSLFDLELCINQLSGAIPLSISNLT-NLRFLFLYHNELSG-IIPQEIGXXXXXXXXXXXX 286
+ L L+L N+ SG +P S++NL+ +L L L N SG I+P
Sbjct: 340 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 399
Query: 287 XH-FRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDW 345
+ F G +P + N ++LV L L+ NYL+G I + G+ L + L N GEI +
Sbjct: 400 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 459
Query: 346 GRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLS 405
L L + N+++G IP + L ++ LS+N + GEIP +G + L L LS
Sbjct: 460 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 519
Query: 406 GNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESL------------------------ 441
N SG IP ELG +L +LDL+ N + +P ++
Sbjct: 520 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 579
Query: 442 --------GSLVKLYYLNLSH-NKLSQQIPIEL-------------DNLIHLSELDLSHN 479
G+L++ + N+LS + P + DN + LD+S+N
Sbjct: 580 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 639
Query: 480 FLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTF 539
L I I M L LNL +N++SG IP ++ GL +D+S NKL+G+IP + +
Sbjct: 640 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 699
Query: 540 RDAPLEALQGNKGLYGDI 557
E N L G I
Sbjct: 700 LTMLTEIDLSNNNLSGPI 717
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 179/373 (47%), Gaps = 48/373 (12%)
Query: 81 NHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLY--NNELFGIIPPQISNLSNLEYL 138
N + ++ ++L+S + +G +L + P +LY NN G IPP +SN S L L
Sbjct: 362 NLSASLLTLDLSSNNFSGPILP-NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSL 420
Query: 139 DFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEV--------------------- 177
S N L G IPS +G L+ L L + N L G IP E+
Sbjct: 421 HLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 480
Query: 178 ---GQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDL 234
T LN ++L +N L G IP+ +G L ++ IL L NNSF G+IP E+G+ +SL L
Sbjct: 481 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 540
Query: 235 ELCINQLSGAIP---------LSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXX 285
+L N +G IP ++ + + R++++ ++ G+ + G
Sbjct: 541 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND---GMKKECHG--------AGN 589
Query: 286 XXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDW 345
F+G + L+ + G+ S TF ++ F+D+S N G I +
Sbjct: 590 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 649
Query: 346 GRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLS 405
G P L +L++ N+ISGSIP E+G+ L LDLSSN + G IP + + L + LS
Sbjct: 650 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 709
Query: 406 GNKLSGCIPRELG 418
N LSG IP E+G
Sbjct: 710 NNNLSGPIP-EMG 721
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 202/476 (42%), Gaps = 56/476 (11%)
Query: 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWL 169
L +L + N++ G + +S NLE+LD S+N IP +G + L L IS N L
Sbjct: 176 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 232
Query: 170 SGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEI-GNL 228
SG + T L L + SN G IP L + L L N F G IP + G
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGAC 290
Query: 229 KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQE-IGXXXXXXXXXXXXX 287
+L L+L N GA+P + + L L L N SG +P + +
Sbjct: 291 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 350
Query: 288 HFRGTVPKSFRNLT-DLVKLRLNQNYLTGNISETFGTYPNLTFID--LSNNSFFGEILSD 344
F G +P+S NL+ L+ L L+ N +G I P T + L NN F G+I
Sbjct: 351 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 410
Query: 345 WGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSL 404
C +L L +S N +SG+IP +G +L+ L L N + GEIP +L + L L L
Sbjct: 411 LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 470
Query: 405 SGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIE 464
N L+G IP L + NL ++ LS N L+ +P+ +G L L L LS+N S IP E
Sbjct: 471 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 530
Query: 465 LDNLIHLSELDLSHNFLGEKI--------------------------------------- 485
L + L LDL+ N I
Sbjct: 531 LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 590
Query: 486 -------SSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534
S ++ R+ + N++ G F+ ++ +D+SYN L G IP
Sbjct: 591 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 646
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 226/547 (41%), Gaps = 104/547 (19%)
Query: 67 ATKISPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIP 126
++ +PC + G+ C ++V I+L+S LN FS+ + LF
Sbjct: 31 SSNKNPCTFDGVTC-RDDKVTSIDLSSKPLN-----VGFSAVSSSLLSLTGLESLF---- 80
Query: 127 PQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSI------------- 173
S + + G + SG LT L +SRN LSG +
Sbjct: 81 -------------LSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 126
Query: 174 -----------PHEVG---QLTVLNQLALDSNFLNGS------IPRSLGNLTHVVI---- 209
P +V +L L L L +N ++G+ + G L H+ I
Sbjct: 127 FLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 186
Query: 210 ---------------LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTN 254
L + +N+F IP +G+ +L L++ N+LSG +IS T
Sbjct: 187 ISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTE 245
Query: 255 LRFLFLYHNELSGIIPQ------------------EI-----GXXXXXXXXXXXXXHFRG 291
L+ L + N+ G IP EI G HF G
Sbjct: 246 LKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 305
Query: 292 TVPKSFRNLTDLVKLRLNQNYLTGNIS-ETFGTYPNLTFIDLSNNSFFGEILSDWGR-CP 349
VP F + + L L L+ N +G + +T L +DLS N F GE+
Sbjct: 306 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 365
Query: 350 QLSLLDVSINNISGSIPLEIGESLQ--LQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGN 407
L LD+S NN SG I + ++ + LQ L L +N G+IP L N L L LS N
Sbjct: 366 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 425
Query: 408 KLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDN 467
LSG IP LGSL L L L N L +P+ L + L L L N L+ +IP L N
Sbjct: 426 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 485
Query: 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527
+L+ + LS+N L +I I R+E+L L LS N+ SG IP + L+ +D++ N
Sbjct: 486 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 545
Query: 528 KLEGQIP 534
G IP
Sbjct: 546 LFNGTIP 552
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 151/453 (33%), Positives = 221/453 (48%), Gaps = 34/453 (7%)
Query: 89 INLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQ 148
++L G + +F + L LDL N +G +PP + S LE L S+N G+
Sbjct: 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 149 IPSGIGL-LTHLTVLHISRNWLSGSIPHEVGQLTV-LNQLALDSNFLNGSI-PRSLGNLT 205
+P L + L VL +S N SG +P + L+ L L L SN +G I P N
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPK 393
Query: 206 HVVI-LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNE 264
+ + LYL NN F G IP + N L L L N LSG IP S+ +L+ LR L L+ N
Sbjct: 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453
Query: 265 LSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTY 324
L G IPQE+ G +P N T+L + L+ N LTG I + G
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513
Query: 325 PNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNY 384
NL + LSNNSF G I ++ G C L LD++ N +G+IP + + Q +++N+
Sbjct: 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK----QSGKIAANF 569
Query: 385 IVGEIPTQL------------GNII--------YLNRLS------LSGNKLSGCIPRELG 418
I G+ + GN++ LNRLS ++ G
Sbjct: 570 IAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD 629
Query: 419 SLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 478
+ ++ +LD+S N LS ++P+ +GS+ L+ LNL HN +S IP E+ +L L+ LDLS
Sbjct: 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSS 689
Query: 479 NFLGEKISSRICRMESLEKLNLSYNNLSGLIPR 511
N L +I + + L +++LS NNLSG IP
Sbjct: 690 NKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 152 bits (385), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 229/498 (45%), Gaps = 53/498 (10%)
Query: 111 LVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLS 170
L +LD+ N+L G IS + L+ L+ S+N+ G IP L L L ++ N +
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP--LKSLQYLSLAENKFT 282
Query: 171 GSIPHEV-GQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQE-IGNL 228
G IP + G L L L N G++P G+ + + L L +N+F G +P + + +
Sbjct: 283 GEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKM 342
Query: 229 KSLFDLELCINQLSGAIPLSISNLT-NLRFLFLYHNELSG-IIPQEIGXXXXXXXXXXXX 286
+ L L+L N+ SG +P S++NL+ +L L L N SG I+P
Sbjct: 343 RGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQ 402
Query: 287 XH-FRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDW 345
+ F G +P + N ++LV L L+ NYL+G I + G+ L + L N GEI +
Sbjct: 403 NNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462
Query: 346 GRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLS 405
L L + N+++G IP + L ++ LS+N + GEIP +G + L L LS
Sbjct: 463 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLS 522
Query: 406 GNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESL------------------------ 441
N SG IP ELG +L +LDL+ N + +P ++
Sbjct: 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDG 582
Query: 442 --------GSLVKLYYLNLSH-NKLSQQIPIEL-------------DNLIHLSELDLSHN 479
G+L++ + N+LS + P + DN + LD+S+N
Sbjct: 583 MKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYN 642
Query: 480 FLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTF 539
L I I M L LNL +N++SG IP ++ GL +D+S NKL+G+IP + +
Sbjct: 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702
Query: 540 RDAPLEALQGNKGLYGDI 557
E N L G I
Sbjct: 703 LTMLTEIDLSNNNLSGPI 720
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 179/373 (47%), Gaps = 48/373 (12%)
Query: 81 NHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLY--NNELFGIIPPQISNLSNLEYL 138
N + ++ ++L+S + +G +L + P +LY NN G IPP +SN S L L
Sbjct: 365 NLSASLLTLDLSSNNFSGPILP-NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSL 423
Query: 139 DFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEV--------------------- 177
S N L G IPS +G L+ L L + N L G IP E+
Sbjct: 424 HLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 483
Query: 178 ---GQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDL 234
T LN ++L +N L G IP+ +G L ++ IL L NNSF G+IP E+G+ +SL L
Sbjct: 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543
Query: 235 ELCINQLSGAIP---------LSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXX 285
+L N +G IP ++ + + R++++ ++ G+ + G
Sbjct: 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND---GMKKECHG--------AGN 592
Query: 286 XXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDW 345
F+G + L+ + G+ S TF ++ F+D+S N G I +
Sbjct: 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Query: 346 GRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLS 405
G P L +L++ N+ISGSIP E+G+ L LDLSSN + G IP + + L + LS
Sbjct: 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712
Query: 406 GNKLSGCIPRELG 418
N LSG IP E+G
Sbjct: 713 NNNLSGPIP-EMG 724
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 202/476 (42%), Gaps = 56/476 (11%)
Query: 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWL 169
L +L + N++ G + +S NLE+LD S+N IP +G + L L IS N L
Sbjct: 179 ELKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKL 235
Query: 170 SGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEI-GNL 228
SG + T L L + SN G IP L + L L N F G IP + G
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGAC 293
Query: 229 KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQE-IGXXXXXXXXXXXXX 287
+L L+L N GA+P + + L L L N SG +P + +
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 288 HFRGTVPKSFRNLT-DLVKLRLNQNYLTGNISETFGTYPNLTFID--LSNNSFFGEILSD 344
F G +P+S NL+ L+ L L+ N +G I P T + L NN F G+I
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413
Query: 345 WGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSL 404
C +L L +S N +SG+IP +G +L+ L L N + GEIP +L + L L L
Sbjct: 414 LSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLIL 473
Query: 405 SGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIE 464
N L+G IP L + NL ++ LS N L+ +P+ +G L L L LS+N S IP E
Sbjct: 474 DFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE 533
Query: 465 LDNLIHLSELDLSHNFLGEKI--------------------------------------- 485
L + L LDL+ N I
Sbjct: 534 LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNL 593
Query: 486 -------SSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534
S ++ R+ + N++ G F+ ++ +D+SYN L G IP
Sbjct: 594 LEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIP 649
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 156/547 (28%), Positives = 226/547 (41%), Gaps = 104/547 (19%)
Query: 67 ATKISPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIP 126
++ +PC + G+ C ++V I+L+S LN FS+ + LF
Sbjct: 34 SSNKNPCTFDGVTC-RDDKVTSIDLSSKPLN-----VGFSAVSSSLLSLTGLESLF---- 83
Query: 127 PQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSI------------- 173
S + + G + SG LT L +SRN LSG +
Sbjct: 84 -------------LSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 129
Query: 174 -----------PHEVG---QLTVLNQLALDSNFLNGS------IPRSLGNLTHVVI---- 209
P +V +L L L L +N ++G+ + G L H+ I
Sbjct: 130 FLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNK 189
Query: 210 ---------------LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTN 254
L + +N+F IP +G+ +L L++ N+LSG +IS T
Sbjct: 190 ISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTE 248
Query: 255 LRFLFLYHNELSGIIPQ------------------EI-----GXXXXXXXXXXXXXHFRG 291
L+ L + N+ G IP EI G HF G
Sbjct: 249 LKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308
Query: 292 TVPKSFRNLTDLVKLRLNQNYLTGNIS-ETFGTYPNLTFIDLSNNSFFGEILSDWGR-CP 349
VP F + + L L L+ N +G + +T L +DLS N F GE+
Sbjct: 309 AVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSA 368
Query: 350 QLSLLDVSINNISGSIPLEIGESLQ--LQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGN 407
L LD+S NN SG I + ++ + LQ L L +N G+IP L N L L LS N
Sbjct: 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFN 428
Query: 408 KLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDN 467
LSG IP LGSL L L L N L +P+ L + L L L N L+ +IP L N
Sbjct: 429 YLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSN 488
Query: 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527
+L+ + LS+N L +I I R+E+L L LS N+ SG IP + L+ +D++ N
Sbjct: 489 CTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTN 548
Query: 528 KLEGQIP 534
G IP
Sbjct: 549 LFNGTIP 555
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 151/289 (52%), Gaps = 21/289 (7%)
Query: 632 EIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--GEMSFQQEEFLNEI 689
E+ A+++F+ ++ +G+GG G VY+ ++ G + AVK+ GE+ FQ E+
Sbjct: 32 ELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ-----TEV 86
Query: 690 QALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-LGWTQRLNVIK 748
+ ++ HRN+++ GFC P ++Y Y+ +GS+ L ++ L W +R +
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN-PDSSNWSELAGT 807
G A L YLH++C P I+HRD+ + N+LLD +EA V DFG+AK ++ D + GT
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT 206
Query: 808 HGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLP 867
G++APE T K +EK DV+ +GV+ LE+I G+ D L ++ + L
Sbjct: 207 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-LARLANDDDVMLLDWVKGLLK 265
Query: 868 YPSLHV-----------QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +++ ++QVA C +P RP M V ++L
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 149/289 (51%), Gaps = 21/289 (7%)
Query: 632 EIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--GEMSFQQEEFLNEI 689
E+ A+++F ++ +G+GG G VY+ ++ G + AVK+ GE+ FQ E+
Sbjct: 24 ELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ-----TEV 78
Query: 690 QALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-LGWTQRLNVIK 748
+ ++ HRN+++ GFC P ++Y Y+ +GS+ L ++ L W +R +
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN-PDSSNWSELAGT 807
G A L YLH++C P I+HRD+ + N+LLD +EA V DFG+AK ++ D + G
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 808 HGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLP 867
G++APE T K +EK DV+ +GV+ LE+I G+ D L ++ + L
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD-LARLANDDDVMLLDWVKGLLK 257
Query: 868 YPSLHV-----------QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +++ ++QVA C +P RP M V ++L
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 152/295 (51%), Gaps = 29/295 (9%)
Query: 632 EIISATNDFNAE------HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF 685
E+ + TN+F+ + +G+GG G VY+ V + + AVKK + + +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQF 77
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRL 744
EI+ + + +H N+V+ GF S ++Y Y+ +GSL D++ C D + L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRC 136
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN--PDSSNWS 802
+ +G A+ + +LH N +HRDI S N+LLD + A +SDFG+A+ + S
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXS 193
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKG-------KHPRDFL--FEXXXX 853
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ L E
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 854 XXXXXIEMLDSRL-PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ +D ++ S V+ ++ VA CL + RP +K+V QLL E
Sbjct: 253 EEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 10/225 (4%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQ 681
L F+G + +++ D N + IG G G+V+RA+ G AVK E F
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM-----EQDFH 74
Query: 682 QE---EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL 738
E EFL E+ + +RH NIV F G + P + I+ EYL GSL ++L + ++L
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 739 GWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS 798
+RL++ VA + YLHN PPIVHRD+ S N+L+D Y V DFG+++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXF 193
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
AGT ++APE+ EK DVYSFGV+ E+ + P
Sbjct: 194 LXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 151/295 (51%), Gaps = 29/295 (9%)
Query: 632 EIISATNDFNAE------HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF 685
E+ + TN+F+ + +G+GG G VY+ V + + AVKK + + +++F
Sbjct: 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQF 77
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRL 744
EI+ + + +H N+V+ GF S ++Y Y+ +GSL D++ C D + L W R
Sbjct: 78 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRC 136
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN--PDSSNWS 802
+ +G A+ + +LH N +HRDI S N+LLD + A +SDFG+A+ +
Sbjct: 137 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXX 193
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKG-------KHPRDFL--FEXXXX 853
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ L E
Sbjct: 194 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 252
Query: 854 XXXXXIEMLDSRL-PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ +D ++ S V+ ++ VA CL + RP +K+V QLL E
Sbjct: 253 EEKTIEDYIDKKMNDADSTSVE----AMYSVASQCLHEKKNKRPDIKKVQQLLQE 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 118/225 (52%), Gaps = 10/225 (4%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQ 681
L F+G + +++ D N + IG G G+V+RA+ G AVK E F
Sbjct: 21 LYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILM-----EQDFH 74
Query: 682 QE---EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL 738
E EFL E+ + +RH NIV F G + P + I+ EYL GSL ++L + ++L
Sbjct: 75 AERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL 134
Query: 739 GWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS 798
+RL++ VA + YLHN PPIVHR++ S N+L+D Y V DFG+++
Sbjct: 135 DERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ AGT ++APE+ EK DVYSFGV+ E+ + P
Sbjct: 194 LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 27/294 (9%)
Query: 632 EIISATNDFNAE------HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF 685
E+ + TN+F+ + +G+GG G VY+ V + + AVKK + + +++F
Sbjct: 13 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQF 71
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRL 744
EI+ + + +H N+V+ GF S ++Y Y+ +GSL D++ C D + L W R
Sbjct: 72 DQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRC 130
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WS 802
+ +G A+ + +LH N +HRDI S N+LLD + A +SDFG+A+ +
Sbjct: 131 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXX 187
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKG-------KHPRDFL--FEXXXX 853
+ GT Y+APE A ++T K D+YSFGV+ LE+I G + P+ L E
Sbjct: 188 RIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIED 246
Query: 854 XXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ +D ++ + ++ VA CL + RP +K+V QLL E
Sbjct: 247 EEKTIEDYIDKKMNDAD---STSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 297
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 142/292 (48%), Gaps = 23/292 (7%)
Query: 632 EIISATNDFNAE------HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF 685
E+ + TN+F+ + G+GG G VY+ V + + AVKK + + +++F
Sbjct: 10 ELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQF 68
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRL 744
EI+ + +H N+V+ GF S ++Y Y +GSL D++ C D + L W R
Sbjct: 69 DQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP-LSWHXRC 127
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN--PDSSNWS 802
+ +G A+ + +LH N +HRDI S N+LLD + A +SDFG+A+ S
Sbjct: 128 KIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXS 184
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKG-------KHPRDFLFEXXXXXX 855
+ GT Y APE A ++T K D+YSFGV+ LE+I G + P+ L +
Sbjct: 185 RIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIE 242
Query: 856 XXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ D + + + VA CL + RP +K+V QLL E
Sbjct: 243 DEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQE 294
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 141/285 (49%), Gaps = 34/285 (11%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
ATN+F+ + IG G G VY+ + G A+K+ +P E S EEF EI+ L+
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTP---ESSQGIEEFETEIETLSFC 92
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADAL 754
RH ++V GFC +IY+Y+E+G+L + L +D + W QRL + G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH------ 808
YLH I+HRD+ S N+LLD + ++DFGI+K +EL TH
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK-------KGTELGQTHLXXVVK 202
Query: 809 ---GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKH------PRDFLFEXXXXXXXXXI 859
GY+ PE ++TEK DVYSFGV+ EV+ + PR+ +
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262
Query: 860 EMLDSRLPYPSLHVQKKLMSIMQ---VAFSCLDQNPESRPTMKRV 901
L+ ++ P+L + + S+ + A CL + E RP+M V
Sbjct: 263 GQLE-QIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 142/278 (51%), Gaps = 20/278 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
ATN+F+ + IG G G VY+ + G A+K+ +P E S EEF EI+ L+
Sbjct: 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKR-RTP---ESSQGIEEFETEIETLSFC 92
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADAL 754
RH ++V GFC +IY+Y+E+G+L + L +D + W QRL + G A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP-DSSNWSELA-GTHGYVA 812
YLH I+HRD+ S N+LLD + ++DFGI+K D ++ + GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKH------PRDFLFEXXXXXXXXXIEMLDSRL 866
PE ++TEK DVYSFGV+ EV+ + PR+ + L+ ++
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLE-QI 268
Query: 867 PYPSLHVQKKLMSIMQ---VAFSCLDQNPESRPTMKRV 901
P+L + + S+ + A CL + E RP+M V
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 103 bits (256), Expect = 6e-22, Method: Composition-based stats.
Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 24/260 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V K AVK E S ++EF E Q + ++ H +VKFYG
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-----EGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
CS +I+ EY+ +G L L + K L +Q L + V + + +L ++ F
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLESHQF--- 125
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
+HRD++++N L+D VSDFG+ +++ D + GT + APE+ + K +
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD--QYVSSVGTKFPVKWSAPEVFHYFKYS 183
Query: 823 EKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIM 881
K DV++FG+L EV GK P D RL P L +I
Sbjct: 184 SKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQ----GHRLYRPHLASD----TIY 235
Query: 882 QVAFSCLDQNPESRPTMKRV 901
Q+ +SC + PE RPT +++
Sbjct: 236 QIMYSCWHELPEKRPTFQQL 255
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 22/275 (8%)
Query: 643 EHCIGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
E IG G G V R ++ + G+ + + G Q+ EFL+E + + H NI+
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ G ++ I+ E++E+G+LD L ND + Q + +++G+A + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYLAEM 137
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-----YVAPEL 815
+ VHRD++++N+L++ VSDFG+++FL +SS+ +E + G + APE
Sbjct: 138 SY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 816 AYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQ 874
K T D +S+G++ EV+ G+ P ++ IE D RLP P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQ-DYRLPPPP---- 246
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
S+ Q+ C ++ +RP +V L + I
Sbjct: 247 DCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMI 281
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 130/263 (49%), Gaps = 26/263 (9%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G+VY A V +G+ A+++ + + ++E +NEI + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+++ EYL GSL ++ C D Q V + AL +LH+N
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN- 135
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRDI S N+LL + ++DFG + P+ S SE+ GT ++APE+
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY 193
Query: 822 TEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIM 881
K D++S G++A+E+I+G+ P +L E L + P L +KL +I
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP--YLNENPLRAL-----YLIATNGTPELQNPEKLSAIF 246
Query: 882 QVAFS-CLDQNPESRPTMKRVSQ 903
+ + CLD + E R + K + Q
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 145/315 (46%), Gaps = 40/315 (12%)
Query: 615 TPGLRSVLTFEGKIVYEEIISATNDF---------NAEHCIGKGGHGSVYRA--KVPSG- 662
TPG++ F +E+ A +F E IG G G V K+P
Sbjct: 4 TPGMK---IFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKR 60
Query: 663 EIF-AVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLE 721
EIF A+K S G Q+ +FL+E + + H N++ G + II E++E
Sbjct: 61 EIFVAIKTLKS---GYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFME 117
Query: 722 SGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG 780
+GSLD L ND + Q + +++G+A + YL + + VHRD++++N+L++
Sbjct: 118 NGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLADMNY---VHRDLAARNILVNSN 171
Query: 781 YEAHVSDFGIAKFLNPDSSNWSELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLAL 835
VSDFG+++FL D+S+ + + G + APE K T DV+S+G++
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 836 EVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPES 894
EV+ G+ P ++ IE D RLP P + L +M C ++
Sbjct: 232 EVMSYGERP---YWDMTNQDVINAIEQ-DYRLP-PPMDCPSALHQLM---LDCWQKDRNH 283
Query: 895 RPTMKRVSQLLCEKI 909
RP ++ L + I
Sbjct: 284 RPKFGQIVNTLDKMI 298
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + TFE + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ EY+E+GSLD L +DA + Q + +++G+A + YL + + VHRD+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+A+ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 134/304 (44%), Gaps = 29/304 (9%)
Query: 609 QSSFGNTPGLRSVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRA--KVPSGEIFA 666
Q + G+ P ++VL F +I + + IG G G VY+ K SG+
Sbjct: 23 QGAMGSDPN-QAVLKFTTEI-------HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEV 74
Query: 667 VKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLD 726
+ G Q+ +FL E + + H NI++ G S K II EY+E+G+LD
Sbjct: 75 PVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD 134
Query: 727 KILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVS 786
K L E Q + +++G+A + YL N + VHRD++++N+L++ VS
Sbjct: 135 KFLREKDG--EFSVLQLVGMLRGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVS 189
Query: 787 DFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKH 842
DFG+++ L D +G + APE K T DV+SFG++ EV+ G+
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
Query: 843 PRDFLFEXXXXXXXXXIEMLDS-RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P +E I D RLP P +I Q+ C Q RP +
Sbjct: 250 P---YWELSNHEVMKAIN--DGFRLPTP----MDCPSAIYQLMMQCWQQERARRPKFADI 300
Query: 902 SQLL 905
+L
Sbjct: 301 VSIL 304
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 26/263 (9%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G+VY A V +G+ A+++ + + ++E +NEI + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+++ EYL GSL ++ C D Q V + AL +LH+N
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN- 135
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRDI S N+LL + ++DFG + P+ S S + GT ++APE+
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 193
Query: 822 TEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIM 881
K D++S G++A+E+I+G+ P +L E L + P L +KL +I
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP--YLNENPLRAL-----YLIATNGTPELQNPEKLSAIF 246
Query: 882 QVAFS-CLDQNPESRPTMKRVSQ 903
+ + CLD + E R + K + Q
Sbjct: 247 RDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + TFE + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ EY+E+GSLD L +DA + Q + +++G+A + YL + F VHRD+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGF---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+++ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 97.8 bits (242), Expect = 2e-20, Method: Composition-based stats.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 643 EHCIGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
E IG G G V R ++ + G+ + + G Q+ EFL+E + + H NI+
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ G ++ I+ E++E+G+LD L ND + Q + +++G+A + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLRGIASGMRYLAEM 135
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-----YVAPEL 815
+ VHRD++++N+L++ VSDFG+++FL +SS+ + + G + APE
Sbjct: 136 SY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 816 AYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYP----- 869
K T D +S+G++ EV+ G+ P ++ IE D RLP P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP---YWDMSNQDVINAIEQ-DYRLPPPPDCPT 248
Query: 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
SLH Q+ C ++ +RP +V L
Sbjct: 249 SLH---------QLMLDCWQKDRNARPRFPQVVSAL 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G+VY A V +G+ A+++ + + ++E +NEI + E ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+++ EYL GSL ++ C D Q V + AL +LH+N
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN- 136
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRDI S N+LL + ++DFG + P+ S S + GT ++APE+
Sbjct: 137 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 194
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
K D++S G++A+E+I+G+ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 39/279 (13%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
+ E +G+G G V +AK + ++ A+K+ S +++ F+ E++ L+ + H
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIES------ESERKAFIVELRQLSRVNH 61
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCND------ASAKELGWTQRLNVIKGVA 751
NIVK YG C +P ++ EY E GSL +L +A + W L +GVA
Sbjct: 62 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA 117
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSELAGTHGY 810
YLH+ ++HRD+ N+LL G + DFG A + +N G+ +
Sbjct: 118 ----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAW 170
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL----FEXXXXXXXXXIEMLDSRL 866
+APE+ +EKCDV+S+G++ EVI + P D + F L L
Sbjct: 171 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 230
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
P P I + C ++P RP+M+ + +++
Sbjct: 231 PKP----------IESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G+VY A V +G+ A+++ + + ++E +NEI + E ++ NIV +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 83
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+++ EYL GSL ++ C D Q V + AL +LH+N
Sbjct: 84 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN- 135
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRDI S N+LL + ++DFG + P+ S S + GT ++APE+
Sbjct: 136 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY 193
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
K D++S G++A+E+I+G+ P
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%), Gaps = 39/279 (13%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
+ E +G+G G V +AK + ++ A+K+ S +++ F+ E++ L+ + H
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKDV-AIKQIES------ESERKAFIVELRQLSRVNH 60
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCND------ASAKELGWTQRLNVIKGVA 751
NIVK YG C +P ++ EY E GSL +L +A + W L +GVA
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC--LQCSQGVA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSELAGTHGY 810
YLH+ ++HRD+ N+LL G + DFG A + +N G+ +
Sbjct: 117 ----YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTN---NKGSAAW 169
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL----FEXXXXXXXXXIEMLDSRL 866
+APE+ +EKCDV+S+G++ EVI + P D + F L L
Sbjct: 170 MAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNL 229
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
P P I + C ++P RP+M+ + +++
Sbjct: 230 PKP----------IESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + TFE + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ EY+E+GSLD L +DA + Q + +++G+A + YL + + VHRD+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+++ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + TFE + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ EY+E+GSLD L +DA + Q + +++G+A + YL + + VHRD+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+++ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 152/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + TFE + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ EY+E+GSLD L +DA + Q + +++G+A + YL + + VHRD+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+ + L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 146/323 (45%), Gaps = 42/323 (13%)
Query: 605 SQTQQSSFGNT----PGLRSVLTFEGKIVYEEIISATNDFNAE---------HCIGKGGH 651
S ++ FGN PGLR TF YE+ ++F E +G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLR---TFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEF 58
Query: 652 GSVY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH 709
G V R K+PS + +V + G Q+ +FL E + + H NI++ G +
Sbjct: 59 GEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK 117
Query: 710 PKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHR 768
K I+ EY+E+GSLD L +DA + Q + +++G+A + YL + + VHR
Sbjct: 118 SKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHR 171
Query: 769 DISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKC 825
D++++N+L++ VSDFG+++ L D G + +PE K T
Sbjct: 172 DLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS 231
Query: 826 DVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQ 882
DV+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 232 DVWSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM- 283
Query: 883 VAFSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 --LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 153/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + T+E + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ EY+E+GSLD L +DA + Q + +++G+A + YL + + VHRD+
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+++ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 105/202 (51%), Gaps = 18/202 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G+VY A V +G+ A+++ + + ++E +NEI + E ++ NIV +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL----QQQPKKELIINEILVMRENKNPNIVNYL 84
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+++ EYL GSL ++ C D Q V + AL +LH+N
Sbjct: 85 DSYLVGDELWVVMEYLAGGSLTDVVTETCMDEG-------QIAAVCRECLQALEFLHSN- 136
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HR+I S N+LL + ++DFG + P+ S S + GT ++APE+
Sbjct: 137 --QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 194
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
K D++S G++A+E+I+G+ P
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 38/314 (12%)
Query: 612 FGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGSVY--RAK 658
FGN PGLR+ + T+E + V+E + + ATN + + +G G G V R K
Sbjct: 7 FGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLK 65
Query: 659 VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYE 718
+PS + +V + G Q+ +FL E + + H NI++ G + K I+ E
Sbjct: 66 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 124
Query: 719 YLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL 777
Y+E+GSLD L +DA + Q + +++G+A + YL + + VHRD++++N+L+
Sbjct: 125 YMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILI 178
Query: 778 DLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLA 834
+ VSDFG+++ L D G + +PE K T DV+S+G++
Sbjct: 179 NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL 238
Query: 835 LEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVAFSCLDQN 891
EV+ G+ P I+ +D RLP P + L +M C ++
Sbjct: 239 WEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM---LDCWQKD 288
Query: 892 PESRPTMKRVSQLL 905
+RP +++ +L
Sbjct: 289 RNNRPKFEQIVSIL 302
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 81/296 (27%), Positives = 139/296 (46%), Gaps = 27/296 (9%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSF 680
L F+G Y++ D +H +G G +G VY + AVK E +
Sbjct: 10 LYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTM 64
Query: 681 QQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGW 740
+ EEFL E + EI+H N+V+ G C+ +II E++ G+L L + + +E+
Sbjct: 65 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNA 123
Query: 741 TQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN 800
L + ++ A+ YL F +HRD++++N L+ + V+DFG+++ + D+
Sbjct: 124 VVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-- 178
Query: 801 WSELAGTH---GYVAPE-LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXX 855
++ AG + APE LAY K + K DV++FGVL E+ G P +
Sbjct: 179 YTAHAGAKFPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQ 233
Query: 856 XXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+ D R+ P +K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 234 VYELLEKDYRMERPE-GCPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 284
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 28/278 (10%)
Query: 643 EHCIGKGGHGSVYRA--KVPSG-EIF-AVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
E IG G G V K+P EIF A+K S G Q+ +FL+E + + H
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKS---GYTEKQRRDFLSEASIMGQFDHP 68
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYL 757
N++ G + II E++E+GSLD L ND + Q + +++G+A + YL
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYL 125
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-----YVA 812
+ + VHR ++++N+L++ VSDFG+++FL D+S+ + + G + A
Sbjct: 126 ADMNY---VHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSL 871
PE K T DV+S+G++ EV+ G+ P ++ IE D RLP P +
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMTNQDVINAIEQ-DYRLP-PPM 237
Query: 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
L +M C ++ RP ++ L + I
Sbjct: 238 DCPSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKMI 272
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 120/248 (48%), Gaps = 11/248 (4%)
Query: 173 IPHEVGQLTVLNQLALDS-NFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSL 231
IP + L LN L + N L G IP ++ LT + LY+ + + G+IP + +K+L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 232 FDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGX-XXXXXXXXXXXXHFR 290
L+ N LSG +P SIS+L NL + N +SG IP G
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 291 GTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQ 350
G +P +F NL +L + L++N L G+ S FG+ N I L+ NS + L G
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD-LGKVGLSKN 245
Query: 351 LSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNI------IYLNRLSL 404
L+ LD+ N I G++P + + L L++S N + GEIP Q GN+ Y N L
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCL 304
Query: 405 SGNKLSGC 412
G+ L C
Sbjct: 305 CGSPLPAC 312
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 115/248 (46%), Gaps = 28/248 (11%)
Query: 341 ILSDWGRCPQLSLLDVS-INNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYL 399
I S P L+ L + INN+ G IP I + QL YL ++ + G IP L I L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 400 NRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYY-LNLSHNKLS 458
L S N LSG +P + SL NL + N +S +P+S GS KL+ + +S N+L+
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 459 QQIPIELDNLIHLSELDLSHNFLGEKIS-----------------------SRICRMESL 495
+IP NL +L+ +DLS N L S ++ ++L
Sbjct: 188 GKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 496 EKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNKGLYG 555
L+L N + G +P+ ++ L +++S+N L G+IP + + A NK L G
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Query: 556 DIRGFPSC 563
P+C
Sbjct: 307 S--PLPAC 312
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 114 LDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGS 172
LDL NN ++G +P ++ L L L+ S N L G+IP G L + + L GS
Sbjct: 249 LDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 28/285 (9%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKF---HSPLPGEMSFQQEEFLNEIQA 691
A N+ E IGKGG G V++ + V + A+K S EM + +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
++ + H NIVK YG +P ++ E++ G L L + A + W+ +L ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYE-----AHVSDFGIAKFLNPDSSNWSELAG 806
+ Y+ N PPIVHRD+ S N+ L E A V+DFG+++ + S L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSVSGLLG 188
Query: 807 THGYVAPEL--AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS 864
++APE A TEK D YSF ++ ++ G+ P F+ I M+
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMIRE 244
Query: 865 RLPYPSL--HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
P++ +L +++++ C +P+ RP + + L E
Sbjct: 245 EGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 634 ISATNDFNAEHCIGKGGHGSVY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
+ ATN + + +G G G V R K+PS + +V + G Q+ +FL E
Sbjct: 30 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASI 87
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGV 750
+ + H NI++ G + K I+ EY+E+GSLD L +DA + Q + +++G+
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGI 144
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-- 808
A + YL + + VHRD++++N+L++ VSDFG+++ L D G
Sbjct: 145 ASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 201
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS-- 864
+ +PE K T DV+S+G++ EV+ G+ P I+ +D
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGY 255
Query: 865 RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
RLP P + L +M C ++ +RP +++ +L
Sbjct: 256 RLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 292
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 152/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + T+E + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ E +E+GSLD L +DA + Q + +++G+A + YL + + VHRD+
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMGY---VHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+++ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 27/281 (9%)
Query: 634 ISATNDFNAEHCIGKGGHGSVY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
+ ATN + + +G G G V R K+PS + +V + G Q+ +FL E
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASI 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGV 750
+ + H NI++ G + K I+ EY+E+GSLD L +DA + Q + +++G+
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLRGI 127
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-- 808
A + YL + + VHRD++++N+L++ VSDFG+++ L D G
Sbjct: 128 ASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS-- 864
+ +PE K T DV+S+G++ EV+ G+ P I+ +D
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGY 238
Query: 865 RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
RLP P + L +M C ++ +RP +++ +L
Sbjct: 239 RLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 151/321 (47%), Gaps = 38/321 (11%)
Query: 605 SQTQQSSFGNT----PGLRSVL---TFEG--KIVYE--EIISATNDFNAEHCIGKGGHGS 653
S ++ FGN PGLR+ + TFE + V+E + + ATN + + +G G G
Sbjct: 2 SDEKRLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGE 60
Query: 654 VY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711
V R K+PS + +V + G Q+ +FL E + + H NI++ G + K
Sbjct: 61 VCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK 119
Query: 712 HSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDI 770
I+ E +E+GSLD L +DA + Q + +++G+A + YL + VHRD+
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGIASGMKYLSDMG---AVHRDL 173
Query: 771 SSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDV 827
+++N+L++ VSDFG+++ L D G + +PE K T DV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 828 YSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIMQVA 884
+S+G++ EV+ G+ P I+ +D RLP P + L +M
Sbjct: 234 WSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGYRLP-PPMDCPAALYQLM--- 283
Query: 885 FSCLDQNPESRPTMKRVSQLL 905
C ++ +RP +++ +L
Sbjct: 284 LDCWQKDRNNRPKFEQIVSIL 304
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 28/285 (9%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKF---HSPLPGEMSFQQEEFLNEIQA 691
A N+ E IGKGG G V++ + V + A+K S EM + +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
++ + H NIVK YG +P ++ E++ G L L + A + W+ +L ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYE-----AHVSDFGIAKFLNPDSSNWSELAG 806
+ Y+ N PPIVHRD+ S N+ L E A V+DFG ++ + S L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSVSGLLG 188
Query: 807 THGYVAPEL--AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS 864
++APE A TEK D YSF ++ ++ G+ P F+ I M+
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMIRE 244
Query: 865 RLPYPSL--HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
P++ +L +++++ C +P+ RP + + L E
Sbjct: 245 EGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ A+K PG MS E FL E Q + +++H +V+ Y
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLK---PGTMS--PESFLEEAQIMKKLKHDKLVQLYA 71
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L D + L +++ VA + Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERMNY--- 126
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ S N+L+ G ++DFG+A+ + + + A + APE A + T K
Sbjct: 127 IHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 825 CDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ KG+ P + +E ++ R+P P Q +S+
Sbjct: 187 SDVWSFGILLTELVTKGRVPYPGM------NNREVLEQVERGYRMPCP----QDCPISLH 236
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C ++PE RPT + + L
Sbjct: 237 ELMIHCWKKDPEERPTFEYLQSFL 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 237 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 271
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 237 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 271
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 26/273 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
+ E IG GG G VYRA E+ H P ++S E E + ++H
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDP-DEDISQTIENVRQEAKLFAMLKHP 66
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
NI+ G C + ++ E+ G L+++L S K + +N +A + YLH
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVL----SGKRIPPDILVNWAVQIARGMNYLH 122
Query: 759 NNCFPPIVHRDISSKNVLL-------DLGYEA-HVSDFGIAKFLNPDSSNWSELAGTHGY 810
+ PI+HRD+ S N+L+ DL + ++DFG+A+ + + AG + +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAW 180
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPS 870
+APE+ ++ DV+S+GVL E++ G+ P + M LP PS
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP---FRGIDGLAVAYGVAMNKLALPIPS 237
Query: 871 LHVQ--KKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ KLM C + +P SRP+ +
Sbjct: 238 TCPEPFAKLME------DCWNPDPHSRPSFTNI 264
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 241
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 242 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 276
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 237 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 271
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 237 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 271
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.9 bits (224), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 241
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 242 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 276
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 241
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 242 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 187
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 241
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 242 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 276
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 237 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 271
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 72
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 132 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 186
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 187 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 240
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 241 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 275
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 184
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 238
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 239 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 273
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 184
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 238
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 239 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 273
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 69
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPE 183
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 184 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 237
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 238 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 272
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 70
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 130 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPE 184
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 185 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 238
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 239 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 273
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEE---FLNEIQALTEIRHRNIV 701
+GKG G + +GE+ +K+ + F +E FL E++ + + H N++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKEL-------IRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
KF G K I EY++ G+L I+ + + W+QR++ K +A + YLH+
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGMAYLHSM- 127
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--------------NPDSSNWSELAGT 807
I+HRD++S N L+ V+DFG+A+ + PD + G
Sbjct: 128 --NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 808 HGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLP 867
++APE+ EK DV+SFG++ E+I G+ D + + R
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVRGFLDRYC 244
Query: 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
P+ S + C D +PE RP+ ++ L
Sbjct: 245 PPNCPP-----SFFPITVRCCDLDPEKRPSFVKLEHWL 277
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 90.1 bits (222), Expect = 5e-18, Method: Composition-based stats.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 26/271 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 68
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 128 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 182
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 183 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903
+K+ +M+ +C NP RP+ + Q
Sbjct: 237 CPEKVYELMR---ACWQWNPSDRPSFAEIHQ 264
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 133/285 (46%), Gaps = 28/285 (9%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKF---HSPLPGEMSFQQEEFLNEIQA 691
A N+ E IGKGG G V++ + V + A+K S EM + +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
++ + H NIVK YG +P ++ E++ G L L + A + W+ +L ++ +A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIA 132
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYE-----AHVSDFGIAKFLNPDSSNWSELAG 806
+ Y+ N PPIVHRD+ S N+ L E A V+DF +++ + S L G
Sbjct: 133 LGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSVSGLLG 188
Query: 807 THGYVAPEL--AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS 864
++APE A TEK D YSF ++ ++ G+ P F+ I M+
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP----FDEYSYGKIKFINMIRE 244
Query: 865 RLPYPSL--HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
P++ +L +++++ C +P+ RP + + L E
Sbjct: 245 EGLRPTIPEDCPPRLRNVIEL---CWSGDPKKRPHFSYIVKELSE 286
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 35/252 (13%)
Query: 619 RSVLTFEGKI----------VYEEIISATNDFNAE---------HCIGKGGHGSVY--RA 657
R L F+GK+ YEE A F E IG G G V R
Sbjct: 11 RENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRL 70
Query: 658 KVPSGE--IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715
+VP A+K + G Q+ +FL+E + + H NI++ G + + + I
Sbjct: 71 RVPGQRDVPVAIKALKA---GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV 775
+ EY+E+GSLD L + Q + +++GV + YL + + VHRD++++NV
Sbjct: 128 VTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNV 182
Query: 776 LLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGV 832
L+D VSDFG+++ L D G + APE + DV+SFGV
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 833 LALEVIK-GKHP 843
+ EV+ G+ P
Sbjct: 243 VMWEVLAYGERP 254
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.7 bits (221), Expect = 6e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 132/279 (47%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPE 180
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDPSQVYELLEKDYRMERPE-G 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 235 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.7 bits (221), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 69
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ + AG + APE
Sbjct: 129 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 183
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 184 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 237
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 238 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 272
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.7 bits (221), Expect = 7e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 73
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ + AG + APE
Sbjct: 133 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 187
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 188 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKDYRMERPE-G 241
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 242 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 276
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.4 bits (220), Expect = 8e-18, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 131/279 (46%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ + AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDPSQVYELLEKDYRMERPE-G 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 235 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 269
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 27/281 (9%)
Query: 634 ISATNDFNAEHCIGKGGHGSVY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
+ ATN + + +G G G V R K+PS + +V + G Q+ +FL E
Sbjct: 13 LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVA-IKTLKVGYTEKQRRDFLGEASI 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGV 750
+ + H NI++ G + K I+ E +E+GSLD L +DA + Q + +++G+
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLRGI 127
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-- 808
A + YL + + VHRD++++N+L++ VSDFG+++ L D G
Sbjct: 128 ASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP 184
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS-- 864
+ +PE K T DV+S+G++ EV+ G+ P I+ +D
Sbjct: 185 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP------YWEMSNQDVIKAVDEGY 238
Query: 865 RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
RLP P + L +M C ++ +RP +++ +L
Sbjct: 239 RLP-PPMDCPAALYQLM---LDCWQKDRNNRPKFEQIVSIL 275
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS +EL GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 35/252 (13%)
Query: 619 RSVLTFEGKI----------VYEEIISATNDFNAE---------HCIGKGGHGSVY--RA 657
R L F+GK+ YEE A F E IG G G V R
Sbjct: 11 RENLYFQGKLPEPQFYAEPHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRL 70
Query: 658 KVPSGE--IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715
+VP A+K + G Q+ +FL+E + + H NI++ G + + + I
Sbjct: 71 RVPGQRDVPVAIKALKA---GYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127
Query: 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV 775
+ EY+E+GSLD L + Q + +++GV + YL + + VHRD++++NV
Sbjct: 128 VTEYMENGSLDTFLRTHDG--QFTIMQLVGMLRGVGAGMRYLSDLGY---VHRDLAARNV 182
Query: 776 LLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGV 832
L+D VSDFG+++ L D G + APE + DV+SFGV
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGV 242
Query: 833 LALEVIK-GKHP 843
+ EV+ G+ P
Sbjct: 243 VMWEVLAYGERP 254
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 132/305 (43%), Gaps = 35/305 (11%)
Query: 619 RSVLTFEGKIVYEEIISATNDF---------NAEHCIGKGGHGSVY--RAKVPSGE--IF 665
+ V TF +E+ A +F E IG G G V R KVP
Sbjct: 1 QGVRTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICV 60
Query: 666 AVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL 725
A+K + G Q+ +FL+E + + H NI+ G + K II EY+E+GSL
Sbjct: 61 AIKTLKA---GYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 726 DKIL-CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAH 784
D L ND + Q + +++G+ + YL + VHRD++++N+L++
Sbjct: 118 DAFLRKNDGRFTVI---QLVGMLRGIGSGMKYLSDMS---AVHRDLAARNILVNSNLVCK 171
Query: 785 VSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-G 840
VSDFG+++ L D G + APE K T DV+S+G++ EV+ G
Sbjct: 172 VSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYG 231
Query: 841 KHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKR 900
+ P ++ IE RLP P +++ Q+ C + RP +
Sbjct: 232 ERP---YWDMSNQDVIKAIEE-GYRLPPP----MDCPIALHQLMLDCWQKERSDRPKFGQ 283
Query: 901 VSQLL 905
+ +L
Sbjct: 284 IVNML 288
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 12/205 (5%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
F+ +G+G +GSVY+A +G+I A+K+ +P E Q E + EI + +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQ----VPVESDLQ--EIIKEISIMQQCDSP 84
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
++VK+YG +I+ EY +GS+ I+ K L + +++ L YLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
F +HRDI + N+LL+ A ++DFG+A L + + + GT ++APE+
Sbjct: 143 ---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
+ D++S G+ A+E+ +GK P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERMNY--- 132
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + W+ G + APE A + T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFT 190
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 240
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C + PE RPT + + L
Sbjct: 241 LHDLM---CQCWRKEPEERPTFEYLQAFL 266
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS +L GT Y+ P
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 178
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 235 GARDLISRL------LKHNPSQRPMLREV 257
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 27/279 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G G VY + AVK E + + EEFL E + EI+H
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 66
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +II E++ G+L L + + +E+ L + ++ A+ YL
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ + AG + APE
Sbjct: 126 EKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE 180
Query: 815 -LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
LAY K + K DV++FGVL E+ G P + + D R+ P
Sbjct: 181 SLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDPSQVYELLEKDYRMERPE-G 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+K+ +M+ +C NP RP+ + Q E +F+
Sbjct: 235 CPEKVYELMR---ACWQWNPSDRPSFAEIHQAF-ETMFQ 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 19/267 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
A DF +GKG G+VY A+ + K E + + + E++ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ YG+ ++I EY G++ + L + E + I +A+AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 122
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H+ ++HRDI +N+LL E ++DFG + ++ SS ++L GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLHVQ 874
EK D++S GVL E + GK P FE I ++ P
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGA 233
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 234 RDLISRL------LKHNPSQRPMLREV 254
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS ++L GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 2e-17, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 22/270 (8%)
Query: 643 EHCIGKGGHGSVY--RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
E IG G G V R K+P V + G Q+ +FL E + + H NI
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLHN 759
+ G + K I+ EY+E+GSLD L ND + Q + +++G++ + YL +
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDG---QFTVIQLVGMLRGISAGMKYLSD 142
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELA 816
+ VHRD++++N+L++ VSDFG+++ L D G + APE
Sbjct: 143 MGY---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 817 YTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQK 875
K T DV+S+G++ EV+ G+ P +E +E RLP P
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERP---YWEMTNQDVIKAVEE-GYRLPSP----MD 251
Query: 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
++ Q+ C + SRP + +L
Sbjct: 252 CPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS ++L GT Y+ P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 176
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 232
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 233 GARDLISRL------LKHNPSQRPMLREV 255
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G + K L + E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANA 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 GARDLISRL------LKHNPSQRPMLREV 259
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 27/288 (9%)
Query: 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNE 688
Y++ D +H +G G +G VY + AVK E + + EEFL E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 266
Query: 689 IQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIK 748
+ EI+H N+V+ G C+ +II E++ G+L L + + +E+ L +
Sbjct: 267 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVSAVVLLYMAT 325
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH 808
++ A+ YL F +HR+++++N L+ + V+DFG+++ + D+ ++ AG
Sbjct: 326 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 380
Query: 809 ---GYVAPE-LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLD 863
+ APE LAY K + K DV++FGVL E+ G P + + D
Sbjct: 381 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKD 435
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
R+ P +K + ++ +C NP RP+ + Q E +F+
Sbjct: 436 YRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAF-ETMFQ 478
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS ++L GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPP 180
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 GARDLISRL------LKHNPSQRPMLREV 259
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 27/288 (9%)
Query: 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNE 688
Y++ D +H +G G +G VY + AVK E + + EEFL E
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 263
Query: 689 IQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIK 748
+ EI+H N+V+ G C+ +II E++ G+L L + + +E+ L +
Sbjct: 264 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 322
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH 808
++ A+ YL F +HR+++++N L+ + V+DFG+++ + D+ ++ AG
Sbjct: 323 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 377
Query: 809 ---GYVAPE-LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLD 863
+ APE LAY K + K DV++FGVL E+ G P + + D
Sbjct: 378 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKD 432
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
R+ P +K + ++ +C NP RP+ + Q E +F+
Sbjct: 433 YRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAF-ETMFQ 475
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 76/285 (26%), Positives = 129/285 (45%), Gaps = 43/285 (15%)
Query: 646 IGKGGHGSVYRAKV----PSGE--IFAVKKFHSP-LPGEMSFQQEEFLNEIQALTEIRHR 698
+G+G G V+ A+ P+ + + AVK P L FQ+E L LT ++H
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAEL-----LTNLQHE 77
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL---CNDA----------SAKELGWTQRLN 745
+IVKFYG C +++EY++ G L+K L DA + ELG +Q L+
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA 805
+ +A + YL + F VHRD++++N L+ + DFG+++ + S+++ +
Sbjct: 138 IASQIASGMVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSR--DVYSTDYYRVG 192
Query: 806 GTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIE 860
G ++ PE K T + DV+SFGV+ E+ GK P L
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 252
Query: 861 MLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+L+ P + V C + P+ R +K + ++L
Sbjct: 253 VLERPRVCPK--------EVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 67
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 124
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 125 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 179
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 235
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 236 GARDLISRL------LKHNPSQRPMLREV 258
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 43 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 100
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 101 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
Query: 797 D---SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D SS S+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 158 DEYTSSRGSKFPVR--WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 211
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 254
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 36/294 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+D+ + IG G V A P E A+K+ + + +E L EIQA+++
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE---KCQTSMDELLKEIQAMSQCH 66
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIV +Y +++ + L GS+ I+ + + E L + +++ V
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPD-----SSNWSELAG 806
+ L YLH N +HRD+ + N+LL ++DFG++ FL + G
Sbjct: 127 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 807 THGYVAPELAYTLKVTE-KCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSR 865
T ++APE+ ++ + K D++SFG+ A+E+ G P + ML +
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKVLMLTLQ 236
Query: 866 LPYPSLH--VQKKLM------SIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
PSL VQ K M S ++ CL ++PE RPT ++LL K F+
Sbjct: 237 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT---AAELLRHKFFQ 287
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 79/294 (26%), Positives = 133/294 (45%), Gaps = 36/294 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+D+ + IG G V A P E A+K+ + + +E L EIQA+++
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLE---KCQTSMDELLKEIQAMSQCH 71
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIV +Y +++ + L GS+ I+ + + E L + +++ V
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPD-----SSNWSELAG 806
+ L YLH N +HRD+ + N+LL ++DFG++ FL + G
Sbjct: 132 EGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 807 THGYVAPELAYTLKVTE-KCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSR 865
T ++APE+ ++ + K D++SFG+ A+E+ G P + ML +
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP-------YHKYPPMKVLMLTLQ 241
Query: 866 LPYPSLH--VQKKLM------SIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
PSL VQ K M S ++ CL ++PE RPT ++LL K F+
Sbjct: 242 NDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT---AAELLRHKFFQ 292
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 49 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 106
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 107 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 163
Query: 797 DSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D ++ G+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 164 DE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 217
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 218 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 260
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 42 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 99
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 100 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 156
Query: 797 DSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D ++ G+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 157 DE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 210
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 211 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 253
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
A DF +GKG G+VY A+ + K E + + + E++ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ YG+ ++I EY G++ + L + E + I +A+AL
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 119
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLHVQ 874
EK D++S GVL E + GK P FE I ++ P
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGA 230
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 231 RDLISRL------LKHNPSQRPMLREV 251
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.4 bits (215), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 121 LSYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQDTYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
A DF +GKG G+VY A+ + K E + + + E++ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ YG+ ++I EY G++ + L + E + I +A+AL
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 121
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ PE+
Sbjct: 122 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLHVQ 874
EK D++S GVL E + GK P FE I ++ P
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGA 232
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 233 RDLISRL------LKHNPSQRPMLREV 253
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 19/267 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
A DF +GKG G+VY A+ + K E + + + E++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ YG+ ++I EY G++ + L + E + I +A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLHVQ 874
EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 RDLISRL------LKHNPSQRPMLREV 257
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 43 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 100
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 101 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 157
Query: 797 DSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D ++ G+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 158 DE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 211
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 212 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 254
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 38 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 95
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 96 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152
Query: 797 DSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D ++ G+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 153 DE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 206
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 207 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 249
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPPECPE-- 408
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
S+ + C + PE RPT + + L
Sbjct: 409 --SLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 27/288 (9%)
Query: 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNE 688
Y++ D +H +G G +G VY + AVK E + + EEFL E
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-----EDTMEVEEFLKE 305
Query: 689 IQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIK 748
+ EI+H N+V+ G C+ +II E++ G+L L + + +E+ L +
Sbjct: 306 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL-RECNRQEVNAVVLLYMAT 364
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH 808
++ A+ YL F +HR+++++N L+ + V+DFG+++ + D+ ++ AG
Sbjct: 365 QISSAMEYLEKKNF---IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAK 419
Query: 809 ---GYVAPE-LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLD 863
+ APE LAY K + K DV++FGVL E+ G P + + D
Sbjct: 420 FPIKWTAPESLAYN-KFSIKSDVWAFGVLLWEIATYGMSP----YPGIDLSQVYELLEKD 474
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
R+ P +K + ++ +C NP RP+ + Q E +F+
Sbjct: 475 YRMERPEGCPEK----VYELMRACWQWNPSDRPSFAEIHQAF-ETMFQ 517
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 121 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPPECPE-- 408
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
S+ + C + PE RPT + + L
Sbjct: 409 --SLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 26/272 (9%)
Query: 643 EHCIGKGGHGSVY--RAKVPSG-EI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
E IG G G V R KVP EI A+K + G Q+ +FL+E + + H
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA---GYTDKQRRDFLSEASIMGQFDHP 69
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYL 757
NI+ G + K II EY+E+GSLD L ND + Q + +++G+ + YL
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYL 126
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
+ + VHRD++++N+L++ VSDFG+++ L D G + APE
Sbjct: 127 SDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 183
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHV 873
K T DV+S+G++ EV+ G+ P ++ IE RLP P
Sbjct: 184 AIAYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEE-GYRLPPP---- 235
Query: 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+++ Q+ C + RP ++ +L
Sbjct: 236 MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 267
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 78/272 (28%), Positives = 125/272 (45%), Gaps = 26/272 (9%)
Query: 643 EHCIGKGGHGSVY--RAKVPSG-EI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
E IG G G V R KVP EI A+K + G Q+ +FL+E + + H
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKA---GYTDKQRRDFLSEASIMGQFDHP 75
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYL 757
NI+ G + K II EY+E+GSLD L ND + Q + +++G+ + YL
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI---QLVGMLRGIGSGMKYL 132
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
+ + VHRD++++N+L++ VSDFG+++ L D G + APE
Sbjct: 133 SDMSY---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPE 189
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHV 873
K T DV+S+G++ EV+ G+ P ++ IE RLP P
Sbjct: 190 AIAYRKFTSASDVWSYGIVMWEVMSYGERP---YWDMSNQDVIKAIEE-GYRLPPP---- 241
Query: 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+++ Q+ C + RP ++ +L
Sbjct: 242 MDCPIALHQLMLDCWQKERSDRPKFGQIVNML 273
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 107/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 58 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 115
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 116 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 797 DSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D S G+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 173 DEETSS--VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 226
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 269
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 87.0 bits (214), Expect = 4e-17, Method: Composition-based stats.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 19/227 (8%)
Query: 677 EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
E S ++EF+ E + + + H +V+ YG C+ + FII EY+ +G L L
Sbjct: 58 EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL--REMRH 115
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
Q L + K V +A+ YL + F +HRD++++N L++ VSDFG+++++
Sbjct: 116 RFQTQQLLEMCKDVCEAMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172
Query: 797 DSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
D ++ G+ + PE+ K + K D+++FGVL E+ GK P +E
Sbjct: 173 DE--YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP----YERFT 226
Query: 853 XXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
RL P L +K + + +SC + + RPT K
Sbjct: 227 NSETAEHIAQGLRLYRPHLASEK----VYTIMYSCWHEKADERPTFK 269
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPP 178
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 235 GARDLISRL------LKHNPSQRPMLREV 257
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G + K L + E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDE---QRTATYITELANA 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS L GT Y+ P
Sbjct: 126 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPP 180
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 GARDLISRL------LKHNPSQRPMLREV 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 124 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 235 GARDLISRL------LKHNPSQRPMLREV 257
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 GARDLISRL------LKHNPSQRPMLREV 259
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 28/268 (10%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G V+ + + A+K G MS +E+F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS--EEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFP 763
C +++E++E G L L A E L+V +G+A YL C
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 123
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLK 820
++HRD++++N L+ VSDFG+ +F+ D ++ GT + +PE+ +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 821 VTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMS 879
+ K DV+SFGVL EV +GK P +E RL P L
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDISTGFRLYKPRLASTH---- 232
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ Q+ C + PE RP R+ + L E
Sbjct: 233 VYQIMNHCWKERPEDRPAFSRLLRQLAE 260
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 247 VVSE-EPIYIVGEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY--- 301
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 359
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 360 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPPECPE-- 408
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
S+ + C + PE RPT + + L
Sbjct: 409 --SLHDLMCQCWRKEPEERPTFEYLQAFL 435
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 86.7 bits (213), Expect = 6e-17, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 28/268 (10%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G V+ + + A+K G MS +E+F+ E + + ++ H +V+ YG
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS--EEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFP 763
C +++E++E G L L A E L+V +G+A YL C
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 121
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLK 820
++HRD++++N L+ VSDFG+ +F+ D ++ GT + +PE+ +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 178
Query: 821 VTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMS 879
+ K DV+SFGVL EV +GK P +E RL P L
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDISTGFRLYKPRLASTH---- 230
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ Q+ C + PE RP R+ + L E
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQLAE 258
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS L GT Y+ P
Sbjct: 121 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 175
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 231
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 232 GARDLISRL------LKHNPSQRPMLREV 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 118/267 (44%), Gaps = 19/267 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
A DF +GKG G+VY A+ + K E + + + E++ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ YG+ ++I EY G++ + L + E + I +A+AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANALS 125
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H+ ++HRDI +N+LL E ++DFG + ++ SS L GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLHVQ 874
EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTEGA 236
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 RDLISRL------LKHNPSQRPMLREV 257
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 86.3 bits (212), Expect = 6e-17, Method: Composition-based stats.
Identities = 76/269 (28%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + +IRH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + + SS + L+GT Y+ P
Sbjct: 122 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPP 176
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 232
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 233 GARDLISRL------LKHNPSQRPMLREV 255
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 330 VVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY--- 384
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 442
Query: 823 EKCDVYSFGVLALE-VIKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E KG+ P + E+LD R+P P +
Sbjct: 443 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPPECPE-- 491
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
S+ + C + PE RPT + + L
Sbjct: 492 --SLHDLMCQCWRKEPEERPTFEYLQAFL 518
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 89
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 146
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS +L GT Y+ P
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPP 201
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
E+ EK D++S GVL E + GK P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 64
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 121
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS L GT Y+ P
Sbjct: 122 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPP 176
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 232
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 233 GARDLISRL------LKHNPSQRPMLREV 255
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 121/268 (45%), Gaps = 28/268 (10%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G V+ + + A+K G MS +E+F+ E + + ++ H +V+ YG
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS--EEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFP 763
C +++E++E G L L A E L+V +G+A YL C
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 126
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLK 820
++HRD++++N L+ VSDFG+ +F+ D ++ GT + +PE+ +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 183
Query: 821 VTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMS 879
+ K DV+SFGVL EV +GK P +E RL P L
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDISTGFRLYKPRLASTH---- 235
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ Q+ C + PE RP R+ + L E
Sbjct: 236 VYQIMNHCWRERPEDRPAFSRLLRQLAE 263
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 86.3 bits (212), Expect = 8e-17, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+++ N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G V+ + + A+K E S +++F+ E + + ++ H +V+ YG
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-----EGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFP 763
C +++E++E G L L A E L+V +G+A YL C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 143
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLK 820
++HRD++++N L+ VSDFG+ +F+ D ++ GT + +PE+ +
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 200
Query: 821 VTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMS 879
+ K DV+SFGVL EV +GK P +E RL P L
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDISTGFRLYKPRLASTH---- 252
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ Q+ C + PE RP R+ + L E
Sbjct: 253 VYQIMNHCWKERPEDRPAFSRLLRQLAE 280
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 65
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 122
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS L GT Y+ P
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPP 177
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 233
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 234 GARDLISRL------LKHNPSQRPMLREV 256
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 12/210 (5%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 89
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 146
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 147 LSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 201
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
E+ EK D++S GVL E + GK P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 80
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 137
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 138 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 192
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 248
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 249 GARDLISRL------LKHNPSQRPMLREV 271
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.9 bits (211), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 74 VVSE-EPIYIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY--- 128
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 186
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 187 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 236
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C + PE RPT + + L
Sbjct: 237 LHDLM---CQCWRKEPEERPTFEYLQAFL 262
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 124/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 68
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ P
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPP 180
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E EK D++S GVL E + GK P FE I ++ P
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 236
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 237 GARDLISRL------LKHNPSQRPXLREV 259
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 70 VVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 124
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 182
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 183 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 232
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 233 LHDLM---CQCWRKDPEERPTFEYLQAFL 258
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 72 VVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 126
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 184
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 185 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 234
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 235 LHDLM---CQCWRKDPEERPTFEYLQAFL 260
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGNMS--PEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 248 VVSE-EPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 302
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+ + + + + ++ G + APE A + T
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 360
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 361 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPPECPE-- 409
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
S+ + C ++PE RPT + + L
Sbjct: 410 --SLHDLMCQCWRKDPEERPTFEYLQAFL 436
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 121/267 (45%), Gaps = 30/267 (11%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVIEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
VHRD+ + N+L+ V+DFG+A+ + + + A + APE A + T K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 825 CDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKKLM 878
DV+SFG+L E+ KG+ P + E+LD R+P P + L
Sbjct: 196 SDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPESLH 245
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLL 905
+M C ++PE RPT + + L
Sbjct: 246 DLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGE-TGKYLRLPQLVDMSAQIASGMAYVERMNY--- 132
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 190
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 191 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 240
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C + PE RPT + + L
Sbjct: 241 LHDLM---CQCWRKEPEERPTFEYLQAFL 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 66
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 123
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E +++FG + ++ SS + L GT Y+ P
Sbjct: 124 LSYCHSKR---VIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 178
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 234
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 235 GARDLISRL------LKHNPSQRPMLREV 257
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ GSL L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVCEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 125/269 (46%), Gaps = 23/269 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALT 693
A DF +GKG G+VY A+ + I A+K F + L E + + + E++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREVEIQS 65
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+RH NI++ YG+ ++I EY G++ + L + E + I +A+A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE---QRTATYITELANA 122
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
L Y H+ ++HRDI +N+LL E +++FG + ++ SS + L GT Y+ P
Sbjct: 123 LSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPP 177
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEX-XXXXXXXXIEMLDSRLPYPSLH 872
E+ EK D++S GVL E + GK P FE I ++ P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP----FEANTYQETYKRISRVEFTFPDFVTE 233
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ L+S + L NP RP ++ V
Sbjct: 234 GARDLISRL------LKHNPSQRPMLREV 256
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.3 bits (207), Expect = 3e-16, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 120/268 (44%), Gaps = 28/268 (10%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G V+ + + A+K G MS +E+F+ E + + ++ H +V+ YG
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS--EEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFP 763
C ++ E++E G L L A E L+V +G+A YL C
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEEAC-- 124
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLK 820
++HRD++++N L+ VSDFG+ +F+ D ++ GT + +PE+ +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 181
Query: 821 VTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMS 879
+ K DV+SFGVL EV +GK P +E RL P L
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIP----YENRSNSEVVEDISTGFRLYKPRLASTH---- 233
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLLCE 907
+ Q+ C + PE RP R+ + L E
Sbjct: 234 VYQIMNHCWRERPEDRPAFSRLLRQLAE 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 32/309 (10%)
Query: 616 PGLRSVLTFEGKIVYEEIISATNDF---------NAEHCIGKGGHGSVY--RAKVPSGEI 664
PG ++ + E YE+ A + F E IG G G V R K+P
Sbjct: 15 PGTKTYIDPE---TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRD 71
Query: 665 FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGS 724
AV + G Q+ +FL E + + H N+V G + K I+ E++E+G+
Sbjct: 72 VAVA-IKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 725 LDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAH 784
LD L + Q + +++G+A + YL + + VHRD++++N+L++
Sbjct: 131 LDAFLRKHDG--QFTVIQLVGMLRGIAAGMRYLADMGY---VHRDLAARNILVNSNLVCK 185
Query: 785 VSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-G 840
VSDFG+++ + D G + APE K T DV+S+G++ EV+ G
Sbjct: 186 VSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 245
Query: 841 KHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKR 900
+ P ++ IE RLP P + Q+ C + RP ++
Sbjct: 246 ERP---YWDMSNQDVIKAIEE-GYRLPAP----MDCPAGLHQLMLDCWQKERAERPKFEQ 297
Query: 901 VSQLLCEKI 909
+ +L + I
Sbjct: 298 IVGILDKMI 306
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ G L L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVMEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 30/267 (11%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + I+ EY+ GSL L + + K L Q +++ +A + Y+ +
Sbjct: 71 VVSE-EPIXIVTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERMNY--- 125
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
VHRD+ + N+L+ V+DFG+A+ + + + A + APE A + T K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 825 CDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKKLM 878
DV+SFG+L E+ KG+ P + E+LD R+P P + L
Sbjct: 186 SDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPESLH 235
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLL 905
+M C + PE RPT + + L
Sbjct: 236 DLM---CQCWRKEPEERPTFEYLQAFL 259
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A V SG++ AVKK ++ QQ E NE+ + + +H N+V+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E Q V V AL LH
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 190
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APEL L
Sbjct: 191 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 248
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E++ G+ P
Sbjct: 249 PEVDIWSLGIMVIEMVDGEPP 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 646 IGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A+ SG AVK ++ QQ E NE+ + + +H N+V+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM------DLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y + +++ E+L+ G+L I+ S L Q V + V AL YLH
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHAQG- 161
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKV 821
++HRDI S ++LL L +SDFG ++ D L GT ++APE ++ +L
Sbjct: 162 --VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
TE D++S G++ +E++ G+ P
Sbjct: 220 TE-VDIWSLGIMVIEMVDGEPP 240
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 8/206 (3%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
DF+ +GKG G+VY A+ + K E + + + E++ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
NI++ YG+ ++I EY G++ + L + E + I +A+AL Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
H+ ++HRDI +N+LL E ++DFG + ++ SS + L GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHP 843
EK D++S GVL E + G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 83.2 bits (204), Expect = 5e-16, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 122/269 (45%), Gaps = 34/269 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+ A+K PG MS E FL E Q + ++RH +V+ Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLK---PGTMS--PEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
S + +I+ EY+ G L L + K L Q +++ +A + Y+ +
Sbjct: 81 VVSE-EPIYIVTEYMSKGCLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERMNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVT 822
VHRD+ + N+L+ V+DFG+A+ + + + ++ G + APE A + T
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFT 193
Query: 823 EKCDVYSFGVLALEV-IKGKHPRDFLFEXXXXXXXXXIEMLDS-----RLPYPSLHVQKK 876
K DV+SFG+L E+ KG+ P + E+LD R+P P +
Sbjct: 194 IKSDVWSFGILLTELTTKGRVPYPGMVNR---------EVLDQVERGYRMPCPP-ECPES 243
Query: 877 LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L +M C ++PE RPT + + L
Sbjct: 244 LHDLM---CQCWRKDPEERPTFEYLQAFL 269
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
DF+ +GKG G+VY A+ + K E + + + E++ + +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
NI++ YG+ ++I EY G++ + L + E + I +A+AL Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE---QRTATYITELANALSYC 128
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
H+ ++HRDI +N+LL E ++DFG + ++ SS L GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHP 843
EK D++S GVL E + G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 38/271 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 87
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L AS + + +++ + A + YLH I
Sbjct: 88 YSTKPQLA-IVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A + S WS +L+G+ ++APE+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 820 KVTE---KCDVYSFGVLALEVIKGKHP------RDFLFEXXXXXXXXXIEMLDSRLPYPS 870
+ DVY+FG++ E++ G+ P RD + E L L
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS------LSPDLSKVR 251
Query: 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ K++ +M CL + + RP+ R+
Sbjct: 252 SNCPKRMKRLMA---ECLKKKRDERPSFPRI 279
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A + +G+ AVKK ++ QQ E NE+ + + H N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM------DLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E T L+V++ AL YLHN
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLR----ALSYLHNQG- 161
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APE+ L
Sbjct: 162 --VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E+I G+ P
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPP 240
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFL--NEIQALTEIRHRNIVK 702
IG+G G V A V SG++ AVKK ++ QQ L NE+ + + +H N+V+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E Q V V AL LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQG- 267
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APEL L
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 325
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E++ G+ P
Sbjct: 326 PEVDIWSLGIMVIEMVDGEPP 346
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 10/210 (4%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFL-NEIQAL 692
S D+ + IG G +G + + S G+I K+ G M+ +++ L +E+ L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLL 59
Query: 693 TEIRHRNIVKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKE-LGWTQRLNVIKG 749
E++H NIV++Y ++ +I+ EY E G L ++ ++ L L V+
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 750 VADALFYLH--NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+ AL H ++ ++HRD+ NV LD + DFG+A+ LN D E GT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGT 179
Query: 808 HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
Y++PE + EK D++S G L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A V SG++ AVKK ++ QQ E NE+ + + +H N+V+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E Q V V AL LH
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ-- 144
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APEL L
Sbjct: 145 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 203
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E++ G+ P
Sbjct: 204 PEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A V SG++ AVKK ++ QQ E NE+ + + +H N+V+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E Q V V AL LH
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ-- 146
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APEL L
Sbjct: 147 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 205
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E++ G+ P
Sbjct: 206 PEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A V SG++ AVKK ++ QQ E NE+ + + +H N+V+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E Q V V AL LH
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ-- 135
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APEL L
Sbjct: 136 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 194
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E++ G+ P
Sbjct: 195 PEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 99/201 (49%), Gaps = 16/201 (7%)
Query: 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
IG+G G V A V SG++ AVKK ++ QQ E NE+ + + +H N+V+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM------DLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
Y +++ E+LE G+L I+ + +E Q V V AL LH
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQ-- 139
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
++HRDI S ++LL +SDFG ++ + L GT ++APEL L
Sbjct: 140 -GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYG 198
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
+ D++S G++ +E++ G+ P
Sbjct: 199 PEVDIWSLGIMVIEMVDGEPP 219
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFL-NEIQAL 692
S D+ + IG G +G + + S G+I K+ G M+ +++ L +E+ L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLL 59
Query: 693 TEIRHRNIVKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKE-LGWTQRLNVIKG 749
E++H NIV++Y ++ +I+ EY E G L ++ ++ L L V+
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 750 VADALFYLH--NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+ AL H ++ ++HRD+ NV LD + DFG+A+ LN D+S GT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGT 179
Query: 808 HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
Y++PE + EK D++S G L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFL-NEIQAL 692
S D+ + IG G +G + + S G+I K+ G M+ +++ L +E+ L
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDY---GSMTEAEKQMLVSEVNLL 59
Query: 693 TEIRHRNIVKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKE-LGWTQRLNVIKG 749
E++H NIV++Y ++ +I+ EY E G L ++ ++ L L V+
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 750 VADALFYLH--NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+ AL H ++ ++HRD+ NV LD + DFG+A+ LN D+S GT
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGT 179
Query: 808 HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
Y++PE + EK D++S G L E+
Sbjct: 180 PYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 38/271 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 20 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 75
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L AS + + +++ + A + YLH I
Sbjct: 76 YSTKPQLA-IVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEVIRMQ 185
Query: 820 KVTE---KCDVYSFGVLALEVIKGKHP------RDFLFEXXXXXXXXXIEMLDSRLPYPS 870
+ DVY+FG++ E++ G+ P RD + E L L
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS------LSPDLSKVR 239
Query: 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ K++ +M CL + + RP+ R+
Sbjct: 240 SNCPKRMKRLMA---ECLKKKRDERPSFPRI 267
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 62/221 (28%), Positives = 109/221 (49%), Gaps = 32/221 (14%)
Query: 646 IGKGGHGSVYRAK----VPSGE--IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
+G+G G V+ A+ +P + + AVK L +++F E + LT ++H++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA----LKEASESARQDFQREAELLTMLQHQH 75
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------CNDASAKELGWTQRLNVI 747
IV+F+G C+ + +++EY+ G L++ L D + LG Q L V
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
VA + YL F VHRD++++N L+ G + DFG+++ + S+++ + G
Sbjct: 136 SQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGR 190
Query: 808 H----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 22/179 (12%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------ 729
+++F E + LT ++H++IV+F+G C+ + +++EY+ G L++ L
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 146
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
D + LG Q L V VA + YL F VHRD++++N L+ G + DFG
Sbjct: 147 GEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFG 203
Query: 790 IAKFLNPDSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
+++ + S+++ + G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 204 MSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 38/271 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 87
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L AS + + +++ + A + YLH I
Sbjct: 88 YSTAPQLA-IVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A + S WS +L+G+ ++APE+
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 820 KVTE---KCDVYSFGVLALEVIKGKHP------RDFLFEXXXXXXXXXIEMLDSRLPYPS 870
+ DVY+FG++ E++ G+ P RD + E L L
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS------LSPDLSKVR 251
Query: 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ K++ +M CL + + RP+ R+
Sbjct: 252 SNCPKRMKRLMA---ECLKKKRDERPSFPRI 279
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 82.0 bits (201), Expect = 1e-15, Method: Composition-based stats.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
D +H +G G +G VY + AVK E + + EEFL E + EI+H
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK-----EDTMEVEEFLKEAAVMKEIKH 87
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
N+V+ G C+ +I+ EY+ G+L L + + +E+ L + ++ A+ YL
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYL 146
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPE 814
F +HRD++++N L+ + V+DFG+++ + D+ ++ AG + APE
Sbjct: 147 EKKNF---IHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 201
Query: 815 -LAYTLKVTEKCDVYSFGVLALEV 837
LAY + K DV++FGVL E+
Sbjct: 202 SLAYN-TFSIKSDVWAFGVLLWEI 224
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 26/269 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 65
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 120
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L + +N E GT Y++PE
Sbjct: 121 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN--EFVGTRSYMSPE 176
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQ 874
+ + D++S G+ +E+ G++PR + E+LD + P +
Sbjct: 177 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM---------AIFELLDYIVNEPPPKLP 227
Query: 875 KKLMSIMQVAF--SCLDQNPESRPTMKRV 901
+ S+ F CL +NP R +K++
Sbjct: 228 SAVFSLEFQDFVNKCLIKNPAERADLKQL 256
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 22/179 (12%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------ 729
+++F E + LT ++H++IV+F+G C+ + +++EY+ G L++ L
Sbjct: 64 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAG 123
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
D + LG Q L V VA + YL F VHRD++++N L+ G + DFG
Sbjct: 124 GEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFG 180
Query: 790 IAKFLNPDSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
+++ + S+++ + G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 181 MSRDIY--STDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 120/264 (45%), Gaps = 32/264 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G V+ + + A+K G MS +E+F+ E + + ++ H +V+ YG
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIRE---GAMS--EEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS--AKELGWTQRLNVIKGVADALFYLHNNCFP 763
C +++E++E G L L A E L+V +G+A YL
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA----YLEE---A 122
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLK 820
++HRD++++N L+ VSDFG+ +F+ D ++ GT + +PE+ +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSR 180
Query: 821 VTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKL 877
+ K DV+SFGVL EV +GK P + +E + + RL P L
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVEDISTGFRLYKPRLASTH-- 232
Query: 878 MSIMQVAFSCLDQNPESRPTMKRV 901
+ Q+ C + PE RP R+
Sbjct: 233 --VYQIMNHCWKERPEDRPAFSRL 254
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 62/305 (20%)
Query: 645 CIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
C+GKG +G V+R GE AVK F S + F++ E N + +RH NI+ F
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIF-SSRDEKSWFRETELYNTVM----LRHENILGFI 97
Query: 705 GFCSHPKHSFI-------------IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+HS +Y+YL+ +LD + C L ++ +A
Sbjct: 98 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-------------LRIVLSIA 144
Query: 752 DALFYLHNNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA- 805
L +LH F P I HRD+ SKN+L+ + ++D G+A ++ S+N ++
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGN 203
Query: 806 ----GTHGYVAPE-LAYTLKVT-----EKCDVYSFGVLALEVIKG----------KHP-R 844
GT Y+APE L T++V ++ D+++FG++ EV + K P
Sbjct: 204 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 263
Query: 845 DFLFEXXXXXXXXXIEMLDSRLP-YPSLHVQK-KLMSIMQVAFSCLDQNPESRPTMKRVS 902
D + + +D + P P+ L S+ ++ C QNP +R T R+
Sbjct: 264 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 323
Query: 903 QLLCE 907
+ L +
Sbjct: 324 KTLTK 328
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 62/305 (20%)
Query: 645 CIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
C+GKG +G V+R GE AVK F S + F++ E N + +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIF-SSRDEKSWFRETELYNTVM----LRHENILGFI 68
Query: 705 GFCSHPKHSFI-------------IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+HS +Y+YL+ +LD + C L ++ +A
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-------------LRIVLSIA 115
Query: 752 DALFYLHNNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA- 805
L +LH F P I HRD+ SKN+L+ + ++D G+A ++ S+N ++
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGN 174
Query: 806 ----GTHGYVAPE-LAYTLKVT-----EKCDVYSFGVLALEVIKG----------KHP-R 844
GT Y+APE L T++V ++ D+++FG++ EV + K P
Sbjct: 175 NPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
Query: 845 DFLFEXXXXXXXXXIEMLDSRLP-YPSLHVQK-KLMSIMQVAFSCLDQNPESRPTMKRVS 902
D + + +D + P P+ L S+ ++ C QNP +R T R+
Sbjct: 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIK 294
Query: 903 QLLCE 907
+ L +
Sbjct: 295 KTLTK 299
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%), Gaps = 46/270 (17%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 71
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A + S WS +L+G+ ++APE+ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---I 178
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP------RD-FLFEXXXXXXXXXIEMLDSRL 866
++ +K DVY+FG++ E++ G+ P RD +F + + S
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
P K+LM+ CL + + RP
Sbjct: 239 P----KAMKRLMA------ECLKKKRDERP 258
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALTEI 695
+DF+ +GKG G+VY A+ + I A+K F S L E + + EI+ + +
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHL 71
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ Y + K +++ E+ G L K L E + ++ +ADAL
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 128
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H ++HRDI +N+L+ E ++DFG + ++ S + GT Y+ PE+
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 183
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
EK D++ GVL E + G P D
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 46/270 (17%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 71
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 72 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 178
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP------RD-FLFEXXXXXXXXXIEMLDSRL 866
++ +K DVY+FG++ E++ G+ P RD +F + + S
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
P K+LM+ CL + + RP
Sbjct: 239 P----KAMKRLMA------ECLKKKRDERP 258
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 29/210 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 36 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 91
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 92 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 145
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A + S WS +L+G+ ++APE+ +
Sbjct: 146 IHRDLKSNNIFLHEDLTVKIGDFGLAT----EKSRWSGSHQFEQLSGSILWMAPEV---I 198
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP 843
++ +K DVY+FG++ E++ G+ P
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.7 bits (195), Expect = 6e-15, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALTEI 695
+DF+ +GKG G+VY A+ + I A+K F S L E + + EI+ + +
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHL 71
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ Y + K +++ E+ G L K L E + ++ +ADAL
Sbjct: 72 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 128
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H ++HRDI +N+L+ E ++DFG + ++ S + GT Y+ PE+
Sbjct: 129 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 183
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
EK D++ GVL E + G P D
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 12/210 (5%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKK-FHSPLPGEMSFQQEEFLNEIQALTEI 695
+DF+ +GKG G+VY A+ + I A+K F S L E + + EI+ + +
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL--EKEGVEHQLRREIEIQSHL 72
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF 755
RH NI++ Y + K +++ E+ G L K L E + ++ +ADAL
Sbjct: 73 RHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE---QRSATFMEELADALH 129
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
Y H ++HRDI +N+L+ E ++DFG + ++ S + GT Y+ PE+
Sbjct: 130 YCHER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEM 184
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
EK D++ GVL E + G P D
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 46/270 (17%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 76
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 183
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP------RD-FLFEXXXXXXXXXIEMLDSRL 866
++ +K DVY+FG++ E++ G+ P RD +F + + S
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
P K+LM+ CL + + RP
Sbjct: 244 P----KAMKRLMA------ECLKKKRDERP 263
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 29/210 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 99
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A + S WS +L+G+ ++APE+ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWSGSHQFEQLSGSILWMAPEV---I 206
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP 843
++ +K DVY+FG++ E++ G+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 46/270 (17%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 18 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 73
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 74 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 127
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 128 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 180
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP------RD-FLFEXXXXXXXXXIEMLDSRL 866
++ +K DVY+FG++ E++ G+ P RD +F + + S
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 240
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
P K+LM+ CL + + RP
Sbjct: 241 P----KAMKRLMA------ECLKKKRDERP 260
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.3 bits (194), Expect = 9e-15, Method: Composition-based stats.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 17/232 (7%)
Query: 619 RSVLTFEGKIVYEEIISA--TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLP 675
R L F+G ++ + +A ++ + + +GKG G V K +G+ AVK S
Sbjct: 11 RENLYFQGPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQ 69
Query: 676 GEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDAS 734
+ +E L E+Q L ++ H NI+K Y F + +++ E G L D+I+ S
Sbjct: 70 VKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----S 125
Query: 735 AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVSDFGIA 791
K +I+ V + Y+H N IVHRD+ +N+LL+ + + DFG++
Sbjct: 126 RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Query: 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
S + GT Y+APE+ + EKCDV+S GV+ ++ G P
Sbjct: 183 THFEA-SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 46/270 (17%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 16 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 71
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 72 YSTAPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 125
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 178
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP------RD-FLFEXXXXXXXXXIEMLDSRL 866
++ +K DVY+FG++ E++ G+ P RD +F + + S
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
P K+LM+ CL + + RP
Sbjct: 239 P----KAMKRLMA------ECLKKKRDERP 258
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
E +G G G V+ A AVK PG MS E FL E + ++H +VK
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSV--EAFLAEANVMKTLQHDKLVK 74
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + + +II E++ GSL L +D +K+ + ++ +A+ + ++ +
Sbjct: 75 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY 132
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKV 821
+HRD+ + N+L+ ++DFG+A+ + + E A + APE
Sbjct: 133 ---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
Query: 822 TEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLM 878
T K DV+SFG+L +E++ G+ P + I L+ R+P P + ++L
Sbjct: 190 TIKSDVWSFGILLMEIVTYGRIPYPGM------SNPEVIRALERGYRMPRPE-NCPEELY 242
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLL 905
+IM C PE RPT + + +L
Sbjct: 243 NIM---MRCWKNRPEERPTFEYIQSVL 266
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 46/270 (17%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 21 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 76
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 77 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 131 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 183
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP------RD-FLFEXXXXXXXXXIEMLDSRL 866
++ +K DVY+FG++ E++ G+ P RD +F + + S
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 243
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
P K+LM+ CL + + RP
Sbjct: 244 P----KAMKRLMA------ECLKKKRDERP 263
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 29/210 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 43 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 98
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 99 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 152
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 153 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 205
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP 843
++ +K DVY+FG++ E++ G+ P
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 87/311 (27%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMS-FQQEEFLNEIQALT 693
+ D C+GKG +G V+R GE AVK F S E S F++ E N +
Sbjct: 5 TVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRETELYNTVM--- 58
Query: 694 EIRHRNIVKFYGFCSHPKHS----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG 749
+RH NI+ F +HS ++I Y E GSL L L L ++
Sbjct: 59 -LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLS 113
Query: 750 VADALFYLHNNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSEL 804
+A L +LH F P I HRD+ SKN+L+ + ++D G+A ++ S+N ++
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDV 172
Query: 805 A-----GTHGYVAPE-LAYTLKVT-----EKCDVYSFGVLALEVIKG----------KHP 843
GT Y+APE L T++V ++ D+++FG++ EV + K P
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232
Query: 844 -RDFLFEXXXXXXXXXIEMLDSRLPY--------PSLHVQKKLMSIMQVAFSCLDQNPES 894
D + + +D + P P+L KLM C QNP +
Sbjct: 233 FYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMK------ECWYQNPSA 286
Query: 895 RPTMKRVSQLL 905
R T R+ + L
Sbjct: 287 RLTALRIKKTL 297
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 29/210 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K G++ AVK + P Q F NE+ L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ--AFKNEVGVLRKTRHVNILLFMG 99
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + P+ + I+ ++ E SL L + E+ + +++ + A + YLH I
Sbjct: 100 YSTKPQLA-IVTQWCEGSSLYHHLHIIETKFEM--IKLIDIARQTAQGMDYLHAKS---I 153
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L + DFG+A S WS +L+G+ ++APE+ +
Sbjct: 154 IHRDLKSNNIFLHEDLTVKIGDFGLATV----KSRWSGSHQFEQLSGSILWMAPEV---I 206
Query: 820 KVTEK------CDVYSFGVLALEVIKGKHP 843
++ +K DVY+FG++ E++ G+ P
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.6 bits (192), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 688 EIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVI 747
EIQ L RH +I+K Y S P F++ EY+ G L +C +E+ + +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLF 117
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+ + A+ Y H + +VHRD+ +NVLLD A ++DFG++ ++ D + G+
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSCGS 173
Query: 808 HGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
Y APE ++ L + D++S GV+ ++ G P D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 122/267 (45%), Gaps = 24/267 (8%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
E +G G G V+ A AVK PG MS E FL E + ++H +VK
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSV--EAFLAEANVMKTLQHDKLVK 247
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + + +II E++ GSL L +D +K+ + ++ +A+ + ++ +
Sbjct: 248 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY 305
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG-THGYVAPELAYTLKV 821
+HRD+ + N+L+ ++DFG+A+ + + E A + APE
Sbjct: 306 ---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
Query: 822 TEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLM 878
T K DV+SFG+L +E++ G+ P + I L+ R+P P + ++L
Sbjct: 363 TIKSDVWSFGILLMEIVTYGRIPYPGM------SNPEVIRALERGYRMPRPE-NCPEELY 415
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLL 905
+IM C PE RPT + + +L
Sbjct: 416 NIM---MRCWKNRPEERPTFEYIQSVL 439
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G VY+A+ GE FA+KK L E + EI L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 706 FCSHPKHSFIIYEYLESGSLDKIL--CNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
K +++E+L+ L K+L C + L ++ G+A Y H+
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVT 822
++HRD+ +N+L++ E ++DFG+A+ ++ T Y AP+ L + K +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 823 EKCDVYSFGVLALEVIKG 840
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G VY+A+ GE FA+KK L E + EI L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 706 FCSHPKHSFIIYEYLESGSLDKIL--CNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
K +++E+L+ L K+L C + L ++ G+A Y H+
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVT 822
++HRD+ +N+L++ E ++DFG+A+ ++ T Y AP+ L + K +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 823 EKCDVYSFGVLALEVIKG 840
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
++ + + +GKG G V K +G+ AVK S + +E L E+Q L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 83
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADAL 754
H NI+K Y F + +++ E G L D+I+ S K +I+ V +
Sbjct: 84 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGI 139
Query: 755 FYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYV 811
Y+H N IVHRD+ +N+LL+ +A++ DFG++ S + GT Y+
Sbjct: 140 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYI 195
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
APE+ + EKCDV+S GV+ ++ G P
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 98/198 (49%), Gaps = 13/198 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G VY+A+ GE FA+KK L E + EI L E++H NIVK Y
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIR--LEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 706 FCSHPKHSFIIYEYLESGSLDKIL--CNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
K +++E+L+ L K+L C + L ++ G+A Y H+
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA----YCHDR--- 119
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVT 822
++HRD+ +N+L++ E ++DFG+A+ ++ T Y AP+ L + K +
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 823 EKCDVYSFGVLALEVIKG 840
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 60/219 (27%), Positives = 106/219 (48%), Gaps = 30/219 (13%)
Query: 646 IGKGGHGSVYRAKV----PSGE--IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
+G+G G V+ A+ P + + AVK L +++F E + LT ++H +
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKT----LKDASDNARKDFHREAELLTNLQHEH 76
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKIL----------CNDASAKELGWTQRLNVIKG 749
IVKFYG C +++EY++ G L+K L EL +Q L++ +
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH- 808
+A + YL + F VHRD++++N L+ + DFG+++ + S+++ + G
Sbjct: 137 IAAGMVYLASQHF---VHRDLATRNCLVGENLLVKIGDFGMSR--DVYSTDYYRVGGHTM 191
Query: 809 ---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
++ PE K T + DV+S GV+ E+ GK P
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 688 EIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVI 747
EIQ L RH +I+K Y S P F++ EY+ G L +C +E+ + +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM---EARRLF 117
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+ + A+ Y H + +VHRD+ +NVLLD A ++DFG++ ++ D G+
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSCGS 173
Query: 808 HGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
Y APE ++ L + D++S GV+ ++ G P D
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 24/257 (9%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQALTEIRHRNIVKF 703
IG G G+VY A+ V + E+ A+KK G+ S ++ ++ + E++ L ++RH N +++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMS--YSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
G ++++ EY GS +L + K L + V G L YLH++
Sbjct: 120 RGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
++HRD+ + N+LL + DFG A + P + GT ++APE+ + +
Sbjct: 175 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 229
Query: 824 ---KCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSI 880
K DV+S G+ +E+ + K P LF I +S P+L
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNES----PALQSGHWSEYF 282
Query: 881 MQVAFSCLDQNPESRPT 897
SCL + P+ RPT
Sbjct: 283 RNFVDSCLQKIPQDRPT 299
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 7/208 (3%)
Query: 639 DFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
DF + +GKG VYRA+ + +G A+K + Q NE++ +++H
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQR-VQNEVKIHCQLKH 70
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
+I++ Y + + +++ E +G +++ L N K + + + + + YL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN--RVKPFSENEARHFMHQIITGMLYL 128
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
H++ I+HRD++ N+LL ++DFG+A L L GT Y++PE+A
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S G + ++ G+ P D
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
++ + + +GKG G V K +G+ AVK S + +E L E+Q L ++
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 106
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADAL 754
H NI+K Y F + +++ E G L D+I+ S K +I+ V +
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGI 162
Query: 755 FYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYV 811
Y+H N IVHRD+ +N+LL+ +A++ DFG++ S + GT Y+
Sbjct: 163 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYI 218
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
APE+ + EKCDV+S GV+ ++ G P
Sbjct: 219 APEVLHGT-YDEKCDVWSTGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
++ + + +GKG G V K +G+ AVK S + +E L E+Q L ++
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 107
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADAL 754
H NI+K Y F + +++ E G L D+I+ S K +I+ V +
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGI 163
Query: 755 FYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYV 811
Y+H N IVHRD+ +N+LL+ +A++ DFG++ S + GT Y+
Sbjct: 164 TYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKMKDKIGTAYYI 219
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
APE+ + EKCDV+S GV+ ++ G P
Sbjct: 220 APEVLHGT-YDEKCDVWSTGVILYILLSGCPP 250
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 118/271 (43%), Gaps = 35/271 (12%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
F IGKG G V++ + ++ A+K + ++ EI L++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSP 85
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
+ K+YG +II EYL GS +L L TQ +++ + L YLH
Sbjct: 86 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH 141
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
+ +HRDI + NVLL E ++DFG+A L + GT ++APE+
Sbjct: 142 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 819 LKVTEKCDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRLPYPSL- 871
K D++S G+ A+E+ +G+ HP LF ++ P P+L
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF------------LIPKNNP-PTLE 245
Query: 872 -HVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+ K L ++ +CL++ P RPT K +
Sbjct: 246 GNYSKPLKEFVE---ACLNKEPSFRPTAKEL 273
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 24/257 (9%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQALTEIRHRNIVKF 703
IG G G+VY A+ V + E+ A+KK G+ S ++ ++ + E++ L ++RH N +++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKM--SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
G ++++ EY GS +L + K L + V G L YLH++
Sbjct: 81 RGCYLREHTAWLVMEYC-LGSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 135
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
++HRD+ + N+LL + DFG A + P + GT ++APE+ + +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 190
Query: 824 ---KCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSI 880
K DV+S G+ +E+ + K P LF I +S P+L
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNES----PALQSGHWSEYF 243
Query: 881 MQVAFSCLDQNPESRPT 897
SCL + P+ RPT
Sbjct: 244 RNFVDSCLQKIPQDRPT 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG G G+VY+ K + K P P + + F NE+ L + RH NI+ F G
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF----QAFRNEVAVLRKTRHVNILLFMG 99
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + + I+ ++ E SL K L + ++ Q +++ + A + YLH I
Sbjct: 100 YMTKDNLA-IVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAKN---I 153
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGTHGYVAPELAYTL 819
+HRD+ S N+ L G + DFG+A S WS + G+ ++APE+
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATV----KSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 820 K---VTEKCDVYSFGVLALEVIKGKHP 843
+ + DVYS+G++ E++ G+ P
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHC------IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP 675
L F+ YE + T D N E +G G G VY+A+ + A K +
Sbjct: 18 LYFQSMKQYEHV---TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV---ID 71
Query: 676 GEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA 735
+ + E+++ EI L H NIVK + + +I+ E+ G++D ++
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LE 129
Query: 736 KELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795
+ L +Q V K DAL YLH+N I+HRD+ + N+L L + ++DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 796 PDSSNWSELAGTHGYVAPELAYTLKVTE-----KCDVYSFGVLALEVIKGKHP 843
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 187 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 76.3 bits (186), Expect = 7e-14, Method: Composition-based stats.
Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 19/262 (7%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ + AVK PG MS Q FL E + ++H +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQA--FLEEANLMKTLQHDKLVRLYA 75
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+ GSL L +D K L + ++ +A+ + Y+ +
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 131
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + NVL+ ++DFG+A+ + + E A + APE T K
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQV 883
DV+SFG+L E++ GK P + R+P + +L IM++
Sbjct: 192 SDVWSFGILLYEIVTYGKIP----YPGRTNADVMTALSQGYRMPRVE-NCPDELYDIMKM 246
Query: 884 AFSCLDQNPESRPTMKRVSQLL 905
C + E RPT + +L
Sbjct: 247 ---CWKEKAEERPTFDYLQSVL 265
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHC------IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP 675
L F+ YE + T D N E +G G G VY+A+ + A K +
Sbjct: 18 LYFQSMKQYEHV---TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV---ID 71
Query: 676 GEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA 735
+ + E+++ EI L H NIVK + + +I+ E+ G++D ++
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LE 129
Query: 736 KELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795
+ L +Q V K DAL YLH+N I+HRD+ + N+L L + ++DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 796 PDSSNWSELAGTHGYVAPELAYTLKVTE-----KCDVYSFGVLALEVIKGKHP 843
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 187 RXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 15/254 (5%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G K G + +K+ + + S ++EE E+ L ++H NIV++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEIN--ISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
+I+ +Y E G L K + N Q L+ + AL ++H+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQICLALKHVHDR---K 145
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
I+HRDI S+N+ L + DFGIA+ LN GT Y++PE+ K
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNK 205
Query: 825 CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVA 884
D+++ G + E+ KH FE ++++ P SLH L S++
Sbjct: 206 SDIWALGCVLYELCTLKHA----FE-AGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL 260
Query: 885 FSCLDQNPESRPTM 898
F +NP RP++
Sbjct: 261 FK---RNPRDRPSV 271
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 22/233 (9%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHC------IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP 675
L F+ YE + T D N E +G G G VY+A+ + A K +
Sbjct: 18 LYFQSMKQYEHV---TRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKV---ID 71
Query: 676 GEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA 735
+ + E+++ EI L H NIVK + + +I+ E+ G++D ++
Sbjct: 72 TKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LE 129
Query: 736 KELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795
+ L +Q V K DAL YLH+N I+HRD+ + N+L L + ++DFG++
Sbjct: 130 RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
Query: 796 PDSSNWSELAGTHGYVAPELAYTLKVTE-----KCDVYSFGVLALEVIKGKHP 843
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 187 RXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 123/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 76
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L A A+ + + L + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 21/239 (8%)
Query: 607 TQQSSFGNTPGLRSVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFA 666
+ Q N+ G +LT I +DF +GKG G+VY A+
Sbjct: 1 SMQKVMENSSGTPDILTRHFTI---------DDFEIGRPLGKGKFGNVYLAREKKSHFIV 51
Query: 667 VKK--FHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGS 724
K F S + E + + EI+ + H NI++ Y + + ++I EY G
Sbjct: 52 ALKVLFKSQI--EKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE 109
Query: 725 LDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAH 784
L K L + E + +++ +ADAL Y H ++HRDI +N+LL L E
Sbjct: 110 LYKELQKSCTFDE---QRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELK 163
Query: 785 VSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++DFG + ++ S + GT Y+ PE+ EK D++ GVL E++ G P
Sbjct: 164 IADFGWS--VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPP 220
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 101/213 (47%), Gaps = 23/213 (10%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
DF +G G G V+ + +G +A+K + + Q E +E L+ +
Sbjct: 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLK-QVEHTNDERLMLSIVT 64
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLN--VIKGVAD-- 752
H I++ +G + F+I +Y+E G L +L +QR V K A
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK---------SQRFPNPVAKFYAAEV 115
Query: 753 --ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
AL YLH+ I++RD+ +N+LLD ++DFG AK++ PD + L GT Y
Sbjct: 116 CLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYV-PDVT--YXLCGTPDY 169
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+APE+ T + D +SFG+L E++ G P
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.9 bits (185), Expect = 1e-13, Method: Composition-based stats.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 646 IGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG +VY A+ I A+K P P E + F E+ +++ H+NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIP-PREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
+++ EY+E +L + + S L +N + D + + H+
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHDM---R 131
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS-SNWSELAGTHGYVAPELAYTLKVTE 823
IVHRDI +N+L+D + DFGIAK L+ S + + + GT Y +PE A E
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDE 191
Query: 824 KCDVYSFGVLALEVIKGKHP 843
D+YS G++ E++ G+ P
Sbjct: 192 CTDIYSIGIVLYEMLVGEPP 211
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 22/269 (8%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 81
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 136
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 137 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 192
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQ 874
+ + D++S G+ +E+ G++P E+LD + P +
Sbjct: 193 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG-----SGSGSMAIFELLDYIVNEPPPKLP 247
Query: 875 KKLMSIMQVAF--SCLDQNPESRPTMKRV 901
+ S+ F CL +NP R +K++
Sbjct: 248 SGVFSLEFQDFVNKCLIKNPAERADLKQL 276
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 119/266 (44%), Gaps = 32/266 (12%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
E +G G G V+ A AVK PG MS E FL E + ++H +VK
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMK---PGSMSV--EAFLAEANVMKTLQHDKLVK 241
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + + +II E++ GSL L +D +K+ + ++ +A+ + ++ +
Sbjct: 242 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQ-PLPKLIDFSAQIAEGMAFIEQRNY 299
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
+HRD+ + N+L+ ++DFG+A+ W+ APE T
Sbjct: 300 ---IHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT---------APEAINFGSFT 347
Query: 823 EKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMS 879
K DV+SFG+L +E++ G+ P + I L+ R+P P + ++L +
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGM------SNPEVIRALERGYRMPRPE-NCPEELYN 400
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLL 905
IM C PE RPT + + +L
Sbjct: 401 IM---MRCWKNRPEERPTFEYIQSVL 423
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 116/269 (43%), Gaps = 31/269 (11%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
F IGKG G V++ + ++ A+K + ++ EI L++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSS 81
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
+ K+YG +II EYL GS +L A Q ++K + L YLH
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL----RAGPFDEFQIATMLKEILKGLDYLH 137
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
+ +HRDI + NVLL + ++DFG+A L + GT ++APE+
Sbjct: 138 SE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 819 LKVTEKCDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
K D++S G+ A+E+ KG+ HP LF ++ P P+L
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF------------LIPKNNP-PTL- 240
Query: 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
V S + +CL+++P RPT K +
Sbjct: 241 VGDFTKSFKEFIDACLNKDPSFRPTAKEL 269
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEIR 696
F IGKG G V++ + ++ A+K QQE I L++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----ITVLSQCD 63
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
+ K+YG +II EYL GS +L L TQ +++ + L Y
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDY 119
Query: 757 LHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
LH+ +HRDI + NVLL E ++DFG+A L + GT ++APE+
Sbjct: 120 LHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 176
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRLPYPS 870
K D++S G+ A+E+ +G+ HP LF ++ P P+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF------------LIPKNNP-PT 223
Query: 871 LH--VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
L K L ++ +CL++ P RPT K +
Sbjct: 224 LEGNYSKPLKEFVE---ACLNKEPSFRPTAKEL 253
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 150/315 (47%), Gaps = 60/315 (19%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 62 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 114
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 115 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 147
Query: 321 FGTYPNLTFIDLSNNSFFGEILSDW---GRCPQLSLLDVSINNISGSIPLEIGESLQLQY 377
G LT + N FG ++D L LD+S N +S +I +L
Sbjct: 148 SG----LTSLQQLN---FGNQVTDLKPLANLTTLERLDISSNKVS-----DISVLAKLTN 195
Query: 378 LD--LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435
L+ +++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN
Sbjct: 196 LESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN 252
Query: 436 FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 495
P L L KL L L N++S P L L L+ L+L+ N L E IS I +++L
Sbjct: 253 LAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNL 306
Query: 496 EKLNLSYNNLSGLIP 510
L L +NN+S + P
Sbjct: 307 TYLTLYFNNISDISP 321
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 117 YNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHE 176
+ N++ + P ++NL+ LE LD S+NK+ S + LT+L L + N +S P
Sbjct: 158 FGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 211
Query: 177 VGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLEL 236
+G LT L++L+L+ N L +L +LT++ L L NN P + L L +L+L
Sbjct: 212 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 267
Query: 237 CINQLSGAIPLS--------------------ISNLTNLRFLFLYHNELSGIIP 270
NQ+S PL+ ISNL NL +L LY N +S I P
Sbjct: 268 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 321
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 190 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 243
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 244 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 299
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 300 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSAGH 357
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 358 NQISDLTP 365
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEIR 696
F IGKG G V++ + ++ A+K QQE I L++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----ITVLSQCD 63
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
+ K+YG +II EYL GS +L L TQ +++ + L Y
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDY 119
Query: 757 LHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
LH+ +HRDI + NVLL E ++DFG+A L + GT ++APE+
Sbjct: 120 LHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 176
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRLPYPS 870
K D++S G+ A+E+ +G+ HP LF ++ P P+
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF------------LIPKNNP-PT 223
Query: 871 LH--VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
L K L ++ +CL++ P RPT K +
Sbjct: 224 LEGNYSKPLKEFVE---ACLNKEPSFRPTAKEL 253
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 150/315 (47%), Gaps = 60/315 (19%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 62 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 114
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 115 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 147
Query: 321 FGTYPNLTFIDLSNNSFFGEILSDW---GRCPQLSLLDVSINNISGSIPLEIGESLQLQY 377
G LT + N FG ++D L LD+S N +S +I +L
Sbjct: 148 SG----LTSLQQLN---FGNQVTDLKPLANLTTLERLDISSNKVS-----DISVLAKLTN 195
Query: 378 LD--LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435
L+ +++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN
Sbjct: 196 LESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN 252
Query: 436 FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 495
P L L KL L L N++S P L L L+ L+L+ N L E IS I +++L
Sbjct: 253 LAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNL 306
Query: 496 EKLNLSYNNLSGLIP 510
L L +NN+S + P
Sbjct: 307 TYLTLYFNNISDISP 321
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 117 YNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHE 176
+ N++ + P ++NL+ LE LD S+NK+ S + LT+L L + N +S P
Sbjct: 158 FGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 211
Query: 177 VGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLEL 236
+G LT L++L+L+ N L +L +LT++ L L NN P + L L +L+L
Sbjct: 212 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 267
Query: 237 CINQLSGAIPLS--------------------ISNLTNLRFLFLYHNELSGIIP 270
NQ+S PL+ ISNL NL +L LY N +S I P
Sbjct: 268 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 321
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 190 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 243
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 244 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 299
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 300 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH 357
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 358 NQISDLTP 365
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 32/270 (11%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G G VY+AK +G + A K + E+ E+++ EI+ L H IVK
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYIVEIEILATCDHPYIVKLL 74
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G H +I+ E+ G++D I+ + L Q V + + +AL +LH+
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSK---R 129
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY--TLKVT 822
I+HRD+ + NVL+ L + ++DFG++ GT ++APE+ T+K T
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 823 E---KCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKK--- 876
K D++S G+ +E+ + + P E I D P+L K
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHH---ELNPMRVLLKIAKSDP----PTLLTPSKWSV 242
Query: 877 -LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+++A LD+NPE+RP+ +QLL
Sbjct: 243 EFRDFLKIA---LDKNPETRPS---AAQLL 266
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 32/270 (11%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G G VY+AK +G + A K + E+ E+++ EI+ L H IVK
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL----EDYIVEIEILATCDHPYIVKLL 82
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G H +I+ E+ G++D I+ + L Q V + + +AL +LH+
Sbjct: 83 GAYYHDGKLWIMIEFCPGGAVDAIMLE--LDRGLTEPQIQVVCRQMLEALNFLHSK---R 137
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY--TLKVT 822
I+HRD+ + NVL+ L + ++DFG++ GT ++APE+ T+K T
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 823 E---KCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKK--- 876
K D++S G+ +E+ + + P E I D P+L K
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHH---ELNPMRVLLKIAKSDP----PTLLTPSKWSV 250
Query: 877 -LMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+++A LD+NPE+RP+ +QLL
Sbjct: 251 EFRDFLKIA---LDKNPETRPS---AAQLL 274
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 39/273 (14%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEIR 696
F IGKG G V++ + ++ A+K QQE I L++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE-----ITVLSQCD 78
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
+ K+YG +II EYL GS +L L TQ +++ + L Y
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDY 134
Query: 757 LHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
LH+ +HRDI + NVLL E ++DFG+A L + GT ++APE+
Sbjct: 135 LHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI 191
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRLPYPS 870
K D++S G+ A+E+ +G+ HP LF ++ P P+
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF------------LIPKNNP-PT 238
Query: 871 LH--VQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
L K L ++ +CL++ P RPT K +
Sbjct: 239 LEGNYSKPLKEFVE---ACLNKEPSFRPTAKEL 268
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 645 CIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
C K GH S KV F ++ F EE NEI L + H NI+K +
Sbjct: 55 CKEKNGH-SEKAIKVIKKSQFDKGRYSDDNKNIEKFH-EEIYNEISLLKSLDHPNIIKLF 112
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
K+ +++ E+ E G L + + N E N++K + + YLH +
Sbjct: 113 DVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE---CDAANIMKQILSGICYLHKH---N 166
Query: 765 IVHRDISSKNVLLDLG---YEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
IVHRDI +N+LL+ + DFG++ F + D L GT Y+APE+ K
Sbjct: 167 IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVL-KKKY 224
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
EKCDV+S GV+ ++ G P
Sbjct: 225 NEKCDVWSCGVIMYILLCGYPP 246
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G +G V + + +G I A+KKF +M ++ + EI+ L ++RH N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV--KKIAMREIKLLKQLRHENLVNLL 90
Query: 705 GFCSHPKHSFIIYEYLESGSLDKI-LCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
C K ++++E+++ LD + L + ++ +I G+ + HN
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG--FCHSHN---- 144
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY-TLKVT 822
I+HRDI +N+L+ + DFG A+ L + + T Y APEL +K
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYG 203
Query: 823 EKCDVYSFGVLALEVIKGK 841
+ DV++ G L E+ G+
Sbjct: 204 KAVDVWAIGCLVTEMFMGE 222
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 147/314 (46%), Gaps = 58/314 (18%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 66 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 118
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 119 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 151
Query: 321 FGTYPNLTFIDLSNNSFFGEI--LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYL 378
G L SF ++ L L LD+S N +S +I +L L
Sbjct: 152 SG------LTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS-----DISVLAKLTNL 200
Query: 379 D--LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNF 436
+ +++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN
Sbjct: 201 ESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNL 257
Query: 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 496
P L L KL L L N++S P L L L+ L+L+ N L E IS I +++L
Sbjct: 258 AP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLT 311
Query: 497 KLNLSYNNLSGLIP 510
L L +NN+S + P
Sbjct: 312 YLTLYFNNISDISP 325
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 117 YNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHE 176
+ N++ + P ++NL+ LE LD S+NK+ S + LT+L L + N +S P
Sbjct: 162 FGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 215
Query: 177 VGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLEL 236
+G LT L++L+L+ N L +L +LT++ L L NN P + L L +L+L
Sbjct: 216 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 271
Query: 237 CINQLSGAIPLS--------------------ISNLTNLRFLFLYHNELSGIIP 270
NQ+S PL+ ISNL NL +L LY N +S I P
Sbjct: 272 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 194 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 247
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 248 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 303
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 304 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGH 361
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 362 NQISDLTP 369
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 147/314 (46%), Gaps = 58/314 (18%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 67 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 119
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 120 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 152
Query: 321 FGTYPNLTFIDLSNNSFFGEI--LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYL 378
G L SF ++ L L LD+S N +S +I +L L
Sbjct: 153 SG------LTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVS-----DISVLAKLTNL 201
Query: 379 D--LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNF 436
+ +++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN
Sbjct: 202 ESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNL 258
Query: 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 496
P L L KL L L N++S P L L L+ L+L+ N L E IS I +++L
Sbjct: 259 AP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLT 312
Query: 497 KLNLSYNNLSGLIP 510
L L +NN+S + P
Sbjct: 313 YLTLYFNNISDISP 326
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 117 YNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHE 176
+ N++ + P ++NL+ LE LD S+NK+ S + LT+L L + N +S P
Sbjct: 163 FGNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITP-- 216
Query: 177 VGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLEL 236
+G LT L++L+L+ N L +L +LT++ L L NN P + L L +L+L
Sbjct: 217 LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKL 272
Query: 237 CINQLSGAIPLS--------------------ISNLTNLRFLFLYHNELSGIIP 270
NQ+S PL+ ISNL NL +L LY N +S I P
Sbjct: 273 GANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 195 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 248
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 249 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 305 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH 362
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 363 NQISDLTP 370
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 24/213 (11%)
Query: 640 FNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGE-MSFQQEEFLNEIQALTEIRH 697
F + +G G V A+ +G++FAVK +P + + ++ NEI L +I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVK----CIPKKALKGKESSIENEIAVLRKIKH 79
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELG-WTQR--LNVIKGVADA 753
NIV P H +++ + + G L D+I+ E G +T++ +I+ V DA
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIV-------EKGFYTEKDASTLIRQVLDA 132
Query: 754 LFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
++YLH IVHRD+ +N+L D + +SDFG++K + S GT GY
Sbjct: 133 VYYLHRM---GIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEGKGDVMSTACGTPGY 188
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
VAPE+ ++ D +S GV+A ++ G P
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENXY 168
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 123/275 (44%), Gaps = 41/275 (14%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKF 703
+G G +G VY+ + V +G++ A+K + G+ ++EE EI L + HRNI +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMD--VTGD---EEEEIKQEINMLKKYSHHRNIATY 86
Query: 704 YG--FCSHP----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
YG +P +++ E+ +GS+ ++ N L + + + L +L
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN-TKGNTLKEEWIAYICREILRGLSHL 145
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
H + ++HRDI +NVLL E + DFG++ L+ + GT ++APE+
Sbjct: 146 HQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 818 TLKVTE-----KCDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRL 866
+ + K D++S G+ A+E+ +G HP LF L R
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-------------LIPRN 249
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P P L +K SCL +N RP +++
Sbjct: 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 99/312 (31%), Positives = 149/312 (47%), Gaps = 53/312 (16%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 62 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 114
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 115 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 147
Query: 321 FGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLD- 379
G +L ++ S+N L L LD+S N +S +I +L L+
Sbjct: 148 SG-LTSLQQLNFSSNQVTD--LKPLANLTTLERLDISSNKVS-----DISVLAKLTNLES 199
Query: 380 -LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVP 438
+++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN P
Sbjct: 200 LIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP 256
Query: 439 ESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKL 498
L L KL L L N++S P L L L+ L+L+ N L E IS I +++L L
Sbjct: 257 --LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNLTYL 310
Query: 499 NLSYNNLSGLIP 510
L +NN+S + P
Sbjct: 311 TLYFNNISDISP 322
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 91/187 (48%), Gaps = 30/187 (16%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163
+ S L L+ +N++ + P ++NL+ LE LD S+NK+ S + LT+L L
Sbjct: 146 ALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLI 201
Query: 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+ N +S P +G LT L++L+L+ N L +L +LT++ L L NN P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 224 EIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYHN 263
+ L L +L+L NQ+S PL+ ISNL NL +L LY N
Sbjct: 257 -LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFN 315
Query: 264 ELSGIIP 270
+S I P
Sbjct: 316 NISDISP 322
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 191 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 244
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 300
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 301 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH 358
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 359 NQISDLTP 366
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 147/315 (46%), Gaps = 59/315 (18%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 62 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 114
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 115 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 147
Query: 321 FGTYPNLTFIDLSNNSFFGEILSDW---GRCPQLSLLDVSINNISGSIPLEIGESLQLQY 377
G L SF ++D L LD+S N +S +I +L
Sbjct: 148 SG------LTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVS-----DISVLAKLTN 196
Query: 378 LD--LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435
L+ +++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN
Sbjct: 197 LESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN 253
Query: 436 FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 495
P L L KL L L N++S P L L L+ L+L+ N L E IS I +++L
Sbjct: 254 LAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNL 307
Query: 496 EKLNLSYNNLSGLIP 510
L L +NN+S + P
Sbjct: 308 TYLTLYFNNISDISP 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163
+ S L L +N++ + P ++NL+ LE LD S+NK+ S + LT+L L
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLI 201
Query: 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+ N +S P +G LT L++L+L+ N L +L +LT++ L L NN P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 224 EIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYHN 263
+ L L +L+L NQ+S PL+ ISNL NL +L LY N
Sbjct: 257 -LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFN 315
Query: 264 ELSGIIP 270
+S I P
Sbjct: 316 NISDISP 322
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 191 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 244
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 300
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 301 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFSNNKVSDVSSLANLTNINWLSAGH 358
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 359 NQISDLTP 366
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 147/315 (46%), Gaps = 59/315 (18%)
Query: 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260
L NLT + NN P + NL L D+ + NQ++ PL+ NLTNL L L
Sbjct: 62 LNNLTQI---NFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLA--NLTNLTGLTL 114
Query: 261 YHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
++N+++ I P +NLT+L +L L+ N ++ +IS
Sbjct: 115 FNNQITDIDP--------------------------LKNLTNLNRLELSSNTIS-DISAL 147
Query: 321 FGTYPNLTFIDLSNNSFFGEILSDW---GRCPQLSLLDVSINNISGSIPLEIGESLQLQY 377
G L SF ++D L LD+S N +S +I +L
Sbjct: 148 SG------LTSLQQLSFSSNQVTDLKPLANLTTLERLDISSNKVS-----DISVLAKLTN 196
Query: 378 LD--LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435
L+ +++N + +I T LG + L+ LSL+GN+L L SL NL LDL+ N +SN
Sbjct: 197 LESLIATNNQISDI-TPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISN 253
Query: 436 FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESL 495
P L L KL L L N++S P L L L+ L+L+ N L E IS I +++L
Sbjct: 254 LAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQL-EDISP-ISNLKNL 307
Query: 496 EKLNLSYNNLSGLIP 510
L L +NN+S + P
Sbjct: 308 TYLTLYFNNISDISP 322
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 90/187 (48%), Gaps = 30/187 (16%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163
+ S L L +N++ + P ++NL+ LE LD S+NK+ S + LT+L L
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLESLI 201
Query: 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+ N +S P +G LT L++L+L+ N L +L +LT++ L L NN P
Sbjct: 202 ATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP- 256
Query: 224 EIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYHN 263
+ L L +L+L NQ+S PL+ ISNL NL +L LY N
Sbjct: 257 -LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFN 315
Query: 264 ELSGIIP 270
+S I P
Sbjct: 316 NISDISP 322
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL--FGQIPSGIGLLTHLTVL 162
+ +L L NN++ I P I L+NL+ L + N+L G + S LT+LT L
Sbjct: 191 LAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGNQLKDIGTLAS----LTNLTDL 244
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP 222
++ N +S P + LT L +L L +N ++ P L LT + L L N P
Sbjct: 245 DLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 300
Query: 223 QEIGNLKSLFDLELCINQLSGAIPLS--------------------ISNLTNLRFLFLYH 262
I NLK+L L L N +S P+S ++NLTN+ +L H
Sbjct: 301 --ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH 358
Query: 263 NELSGIIP 270
N++S + P
Sbjct: 359 NQISDLTP 366
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 50 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 105
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 162
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 163 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 62 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 175 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 72 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 127
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 184
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 185 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 52 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 107
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 165 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 56 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 111
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 168
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 169 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG G V R +GE A+K+ L + +E + EIQ + ++ H N+V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMKKLNHPNVVSAR 78
Query: 705 GFCSHPKH------SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
+ + EY E G L K L + L ++ ++ AL YLH
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 138
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
N I+HRD+ +N++L G + + D G AK L+ +E GT Y+APEL
Sbjct: 139 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPEL 194
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
K T D +SFG LA E I G P
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
++ + + +GKG G V K +G+ AVK S + +E L E+Q L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQL 83
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADAL 754
H NI K Y F + +++ E G L D+I+ S K +I+ V +
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGI 139
Query: 755 FYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYV 811
Y H N IVHRD+ +N+LL+ +A++ DFG++ S + GT Y+
Sbjct: 140 TYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA-SKKXKDKIGTAYYI 195
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
APE+ + EKCDV+S GV+ ++ G P
Sbjct: 196 APEVLHGT-YDEKCDVWSTGVILYILLSGCPP 226
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 70 KDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKD---K 125
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 182
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 183 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 93/208 (44%), Gaps = 17/208 (8%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG G V R +GE A+K+ L + +E + EIQ + ++ H N+V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK---NRERWCLEIQIMKKLNHPNVVSAR 79
Query: 705 GFCSHPKH------SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
+ + EY E G L K L + L ++ ++ AL YLH
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH 139
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
N I+HRD+ +N++L G + + D G AK L+ +E GT Y+APEL
Sbjct: 140 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD-QGELCTEFVGTLQYLAPEL 195
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
K T D +SFG LA E I G P
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 83
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 84 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 138
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 139 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 198
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 199 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 251
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 252 RL---CWKERPEDRPTFDYLRSVL 272
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVL 264
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVL 264
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 81
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 136
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 249
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 250 RL---CWKERPEDRPTFDYLRSVL 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 76
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 77 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 131
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 132 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 191
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 244
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 245 RL---CWKERPEDRPTFDYLRSVL 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 77
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 78 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 132
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 133 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 192
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 193 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 245
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 246 RL---CWKERPEDRPTFDYLRSVL 266
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 73.9 bits (180), Expect = 4e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 84
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 85 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 139
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 140 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIK 199
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 200 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 252
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 253 RL---CWKERPEDRPTFDYLRSVL 273
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 113/266 (42%), Gaps = 24/266 (9%)
Query: 646 IGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G V+ ++ + + AVK LP ++ + +FL E + L + H NIV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G C+ + +I+ E ++ G L + + L L ++ A + YL + C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH----GYVAPELAYTLK 820
+HRD++++N L+ +SDFG+++ ++ G + APE +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 821 VTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMS 879
+ + DV+SFG+L E G P + RLP P L +
Sbjct: 292 YSSESDVWSFGILLWETFSLGASP----YPNLSNQQTREFVEKGGRLPCPELCPD----A 343
Query: 880 IMQVAFSCLDQNPESRPTMKRVSQLL 905
+ ++ C P RP+ + Q L
Sbjct: 344 VFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 18/270 (6%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 117
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXI-EMLDSRLPYPSLHV 873
+ + D++S G+ +E+ G++P I E+LD + P +
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKL 233
Query: 874 QKKLMSIMQVAF--SCLDQNPESRPTMKRV 901
+ S+ F CL +NP R +K++
Sbjct: 234 PSGVFSLEFQDFVNKCLIKNPAERADLKQL 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 91/197 (46%), Gaps = 23/197 (11%)
Query: 646 IGKGGHGSV----YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
IGKG G V YR G AVK + + FL E +T++RH N+V
Sbjct: 14 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ------AFLAEASVMTQLRHSNLV 62
Query: 702 KFYGFCSHPKHS-FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ G K +I+ EY+ GSL L + + LG L V +A+ YL N
Sbjct: 63 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN 121
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
F VHRD++++NVL+ A VSDFG+ K SS + APE K
Sbjct: 122 NF---VHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKK 175
Query: 821 VTEKCDVYSFGVLALEV 837
+ K DV+SFG+L E+
Sbjct: 176 FSTKSDVWSFGILLWEI 192
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 21/224 (9%)
Query: 630 YEEIISATNDFNAE---HCIGK-GGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF 685
YE + T D N E IG+ G G VY+A+ + A K E + E++
Sbjct: 1 YEHV---TRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEE---ELEDY 54
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLN 745
+ EI L H NIVK + + +I+ E+ G++D ++ + L +Q
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE--LERPLTESQIQV 112
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI-AKFLNPDSSNWSEL 804
V K DAL YLH+N I+HRD+ + N+L L + ++DFG+ AK
Sbjct: 113 VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF 169
Query: 805 AGTHGYVAPELAYTLKVTE-----KCDVYSFGVLALEVIKGKHP 843
GT ++APE+ + K DV+S G+ +E+ + + P
Sbjct: 170 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 40/296 (13%)
Query: 638 NDFNAEHCIGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
N+ +G G G V A K + AVK S + ++E ++E++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD---EKEALMSELKI 94
Query: 692 LTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA---KELGWTQRL--- 744
++ + +H NIV G C+H +I EY G L L A A KE G L
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 745 -----NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
V +G+A F NC +HRD++++NVLL G+ A + DFG+A+ + D S
Sbjct: 155 LHFSSQVAQGMA---FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIMND-S 206
Query: 800 NWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXX 855
N+ ++APE + T + DV+S+G+L E+ G +P +
Sbjct: 207 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL---VNSK 263
Query: 856 XXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+ ++ P+ K + SIMQ +C P RPT +++ L E+ E
Sbjct: 264 FYKLVKDGYQMAQPAF-APKNIYSIMQ---ACWALEPTHRPTFQQICSFLQEQAQE 315
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 73.6 bits (179), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 91/197 (46%), Gaps = 23/197 (11%)
Query: 646 IGKGGHGSV----YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
IGKG G V YR G AVK + + FL E +T++RH N+V
Sbjct: 29 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ------AFLAEASVMTQLRHSNLV 77
Query: 702 KFYGFCSHPKHS-FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ G K +I+ EY+ GSL L + + LG L V +A+ YL N
Sbjct: 78 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN 136
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
F VHRD++++NVL+ A VSDFG+ K SS + APE K
Sbjct: 137 NF---VHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKK 190
Query: 821 VTEKCDVYSFGVLALEV 837
+ K DV+SFG+L E+
Sbjct: 191 FSTKSDVWSFGILLWEI 207
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 81
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 82 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 136
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 137 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 196
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 197 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 249
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 250 RL---CWKERPEDRPTFDYLRSVL 270
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 85
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 86 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 140
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 141 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 200
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 201 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 253
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 254 RL---CWKERPEDRPTFDYLRSVL 274
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVL 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 70
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 71 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 125
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 126 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 185
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 238
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 239 RL---CWKERPEDRPTFDYLRSVL 259
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 73.2 bits (178), Expect = 6e-13, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 80
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 81 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 135
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 136 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 195
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 196 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 248
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 249 RL---CWKERPEDRPTFDYLRSVL 269
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 31/263 (11%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IGKG G VY+ + E+ A+K + ++ EI L++ I +++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQ---EITVLSQCDSPYITRYF 83
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G +II EYL GS +L L T +++ + L YLH+
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHSER--- 136
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
+HRDI + NVLL + ++DFG+A L + GT ++APE+ K
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFK 196
Query: 825 CDVYSFGVLALEVIKGK------HPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
D++S G+ A+E+ KG+ HP LF ++ P P+L Q
Sbjct: 197 ADIWSLGITAIELAKGEPPNSDLHPMRVLF------------LIPKNSP-PTLEGQHS-K 242
Query: 879 SIMQVAFSCLDQNPESRPTMKRV 901
+ +CL+++P RPT K +
Sbjct: 243 PFKEFVEACLNKDPRFRPTAKEL 265
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 73.2 bits (178), Expect = 7e-13, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 21/263 (7%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ + AVK PG MS Q FL E + ++H +V+ Y
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK---PGTMSVQA--FLEEANLMKTLQHDKLVRLYA 74
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II E++ GSL L +D K L + ++ +A+ + Y+ +
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERKNY--- 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + NVL+ ++DFG+A+ + + E A + APE T K
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSL-HVQKKLMSIMQ 882
+V+SFG+L E++ GK P + L P + + +L IM+
Sbjct: 191 SNVWSFGILLYEIVTYGKIP------YPGRTNADVMSALSQGYRMPRMENCPDELYDIMK 244
Query: 883 VAFSCLDQNPESRPTMKRVSQLL 905
+ C + E RPT + +L
Sbjct: 245 M---CWKEKAEERPTFDYLQSVL 264
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 91/197 (46%), Gaps = 23/197 (11%)
Query: 646 IGKGGHGSV----YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
IGKG G V YR G AVK + + FL E +T++RH N+V
Sbjct: 201 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQA------FLAEASVMTQLRHSNLV 249
Query: 702 KFYGFCSHPKHS-FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ G K +I+ EY+ GSL L + + LG L V +A+ YL N
Sbjct: 250 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN 308
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
F VHRD++++NVL+ A VSDFG+ K SS + APE K
Sbjct: 309 NF---VHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKK 362
Query: 821 VTEKCDVYSFGVLALEV 837
+ K DV+SFG+L E+
Sbjct: 363 FSTKSDVWSFGILLWEI 379
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 31/247 (12%)
Query: 681 QQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA---K 736
++E ++E++ ++ + +H NIV G C+H +I EY G L L A A K
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK 151
Query: 737 ELGWTQRL--------NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDF 788
E G L V +G+A F NC +HRD++++NVLL G+ A + DF
Sbjct: 152 EDGRPLELRDLLHFSSQVAQGMA---FLASKNC----IHRDVAARNVLLTNGHVAKIGDF 204
Query: 789 GIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPR 844
G+A+ + D SN+ ++APE + T + DV+S+G+L E+ G +P
Sbjct: 205 GLARDIMND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
Query: 845 DFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
+ + ++ P+ K + SIMQ +C P RPT +++
Sbjct: 264 PGIL---VNSKFYKLVKDGYQMAQPAF-APKNIYSIMQ---ACWALEPTHRPTFQQICSF 316
Query: 905 LCEKIFE 911
L E+ E
Sbjct: 317 LQEQAQE 323
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 114/267 (42%), Gaps = 26/267 (9%)
Query: 646 IGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G G V+ ++ + + AVK LP ++ + +FL E + L + H NIV+
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRLI 178
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G C+ + +I+ E ++ G L + + L L ++ A + YL + C
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC--- 233
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG-----THGYVAPELAYTL 819
+HRD++++N L+ +SDFG+++ ++ +G + APE
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ + + DV+SFG+L E G P + RLP P L
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASP----YPNLSNQQTREFVEKGGRLPCPELCPD---- 342
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLL 905
++ ++ C P RP+ + Q L
Sbjct: 343 AVFRLMEQCWAYEPGQRPSFSTIYQEL 369
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 117
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 117
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 91
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 266
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 267 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 91
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 150 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 266
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 267 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 307
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 414 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 469
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 470 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 527 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 117
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 99/209 (47%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + + + + E+Q L E
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI---RNQIIRELQVLHECN 62
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 117
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 118 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 173
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 174 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 111/259 (42%), Gaps = 22/259 (8%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG V+ A+ + AVK + L + SF F E Q + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 78
Query: 705 --GFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
G P +I+ EY++ +L I+ + + + + VI AL + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQN 135
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN----WSELAGTHGYVAPELA 816
I+HRD+ N+L+ V DFGIA+ + DS N + + GT Y++PE A
Sbjct: 136 G---IIHRDVKPANILISATNAVKVVDFGIARAIA-DSGNSVXQTAAVIGTAQYLSPEQA 191
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKK 876
V + DVYS G + EV+ G+ P F + + +P PS +
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIP-PSARHEGL 246
Query: 877 LMSIMQVAFSCLDQNPESR 895
+ V L +NPE+R
Sbjct: 247 SADLDAVVLKALAKNPENR 265
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 122/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 73
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPES 188
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 73
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
++E L E + ++ + IV+ G C + ++ E E G L+K L + K+
Sbjct: 415 KDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELGPLNKYLQQNRHVKD---K 470
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+ ++ V+ + YL + F VHRD++++NVLL + A +SDFG++K L D + +
Sbjct: 471 NIIELVHQVSMGMKYLEESNF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 527
Query: 802 SELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHP 843
A THG + APE K + K DV+SFGVL E G+ P
Sbjct: 528 K--AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 75
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 76 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 130
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HRD+ + N+L+ ++DFG+A+ + E A + APE T K
Sbjct: 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 243
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 244 RL---CWKERPEDRPTFDYLRSVL 264
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 33/268 (12%)
Query: 646 IGKGGHGSVY----RAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G G V+ R+ I + K S +P E+ EI+ L + H NI+
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP------MEQIEAEIEVLKSLDHPNII 83
Query: 702 KFYGFCSHPKHSFIIYEYLESGS-LDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
K + + +I+ E E G L++I+ A K L ++K + +AL Y H+
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 761 CFPPIVHRDISSKNVLL-DLGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
+VH+D+ +N+L D + + DFG+A+ D + + AGT Y+APE+ +
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS-TNAAGTALYMAPEV-F 198
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPY--PSLHVQK 875
VT KCD++S GV+ ++ G P +E + + Y P+ V+
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLP----------FTGTSLEEVQQKATYKEPNYAVEC 248
Query: 876 KLMSIMQVAF--SCLDQNPESRPTMKRV 901
+ ++ V L ++PE RP+ +V
Sbjct: 249 RPLTPQAVDLLKQMLTKDPERRPSAAQV 276
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + Q + E+Q L E
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHECN 89
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 144
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 145 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 200
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 201 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 104
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 163 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 219
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 279
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 280 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 72
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 131 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 187
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 247
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 248 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 288
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 73
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 132 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 188
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 248
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 249 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 80
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 139 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 195
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 255
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 256 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 296
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%), Gaps = 17/220 (7%)
Query: 633 IISATNDFNAEH-----CIGKGGHGSV-YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFL 686
+ D N +H IGKG G V K + +++A+K + E + +
Sbjct: 5 VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERN-EVRNVF 63
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E+Q + + H +V + + F++ + L G L L + KE T +L +
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE--TVKLFI 121
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ V AL YL N I+HRD+ N+LLD H++DF IA L P + + +AG
Sbjct: 122 CELVM-ALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-PRETQITTMAG 176
Query: 807 THGYVAPELAYTLK---VTEKCDVYSFGVLALEVIKGKHP 843
T Y+APE+ + K + D +S GV A E+++G+ P
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V++ + PSG + A K H + + Q + E+Q L E
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ---IIRELQVLHECN 124
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + VIKG L
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG----L 179
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y++PE
Sbjct: 180 TYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPE 235
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 236 RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 78
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 137 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 193
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 253
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 254 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 294
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 77
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 136 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 192
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 252
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 253 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 293
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 71
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 130 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 186
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 246
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 247 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 287
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELG-WTQR- 743
NEI L +I+H NIV H ++I + + G L D+I+ E G +T+R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERD 117
Query: 744 -LNVIKGVADALFYLHNNCFPPIVHRDISSKNVL---LDLGYEAHVSDFGIAKFLNPDSS 799
+I V DA+ YLH+ IVHRD+ +N+L LD + +SDFG++K +P S
Sbjct: 118 ASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV 174
Query: 800 NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
S GT GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 175 -LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 79
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 138 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 194
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 254
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 255 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 76
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 20/258 (7%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG V+ A+ + AVK + L + SF F E Q + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 78
Query: 705 --GFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
G P +I+ EY++ +L I+ + + + + VI AL + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQN 135
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA---GTHGYVAPELAY 817
I+HRD+ N+++ V DFGIA+ + ++ ++ A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKL 877
V + DVYS G + EV+ G+ P F + + +P PS +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIP-PSARHEGLS 247
Query: 878 MSIMQVAFSCLDQNPESR 895
+ V L +NPE+R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 80/312 (25%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHR 698
+G G G V A K + AVK P ++E ++E++ L+ + H
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 87
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL--------DKILCNDASAKELGWTQ-------- 742
NIV G C+ + +I EY G L D +C+ S + +
Sbjct: 88 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 743 ---RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
V KG+A F NC +HRD++++N+LL G + DFG+A+ + D S
Sbjct: 148 LSFSYQVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND-S 199
Query: 800 NWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXX 856
N+ ++APE + T + DV+S+G+ FL+E
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI-------------FLWELFSLGSS 246
Query: 857 XXIEMLDSRLPYPSLHVQKKLMSIMQVAF-----------------SCLDQNPESRPTMK 899
PYP + V K +++ F +C D +P RPT K
Sbjct: 247 ----------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 296
Query: 900 RVSQLLCEKIFE 911
++ QL+ ++I E
Sbjct: 297 QIVQLIEKQISE 308
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 111/258 (43%), Gaps = 20/258 (7%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG V+ A+ + AVK + L + SF F E Q + H IV Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 78
Query: 705 --GFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
G P +I+ EY++ +L I+ + + + + VI AL + H N
Sbjct: 79 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQN 135
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA---GTHGYVAPELAY 817
I+HRD+ N+++ V DFGIA+ + ++ ++ A GT Y++PE A
Sbjct: 136 G---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKL 877
V + DVYS G + EV+ G+ P F + + +P PS +
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPDSVAYQHVREDPIP-PSARHEGLS 247
Query: 878 MSIMQVAFSCLDQNPESR 895
+ V L +NPE+R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 80/312 (25%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHR 698
+G G G V A K + AVK P ++E ++E++ L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL--------DKILCNDASAKELGWTQ-------- 742
NIV G C+ + +I EY G L D +C+ S + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 743 ---RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
V KG+A F NC +HRD++++N+LL G + DFG+A+ + D S
Sbjct: 171 LSFSYQVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARHIKND-S 222
Query: 800 NWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXX 856
N+ ++APE + T + DV+S+G+ FL+E
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI-------------FLWELFSLGSS 269
Query: 857 XXIEMLDSRLPYPSLHVQKKLMSIMQVAF-----------------SCLDQNPESRPTMK 899
PYP + V K +++ F +C D +P RPT K
Sbjct: 270 ----------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
Query: 900 RVSQLLCEKIFE 911
++ QL+ ++I E
Sbjct: 320 QIVQLIEKQISE 331
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 665 FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY--GFCSHPKHS--FIIYEYL 720
AVK + L + SF F E Q + H IV Y G P +I+ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 721 ESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG 780
+ +L I+ + + + + VI AL + H N I+HRD+ N+++
Sbjct: 99 DGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISAT 152
Query: 781 YEAHVSDFGIAKFLNPDSSNWSELA---GTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
V DFGIA+ + ++ ++ A GT Y++PE A V + DVYS G + EV
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 838 IKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESR 895
+ G+ P F + + +P PS + + V L +NPE+R
Sbjct: 213 LTGEPP----FTGDSPVSVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
EIQ L RH +I+K Y S P F++ EY+ G L +C + E + +
Sbjct: 65 REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDE---KESRRL 121
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ + + Y H + +VHRD+ +NVLLD A ++DFG++ ++ D G
Sbjct: 122 FQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSCG 177
Query: 807 THGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
+ Y APE ++ L + D++S GV+ ++ G P D
Sbjct: 178 SPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 19/238 (7%)
Query: 665 FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY--GFCSHPKHS--FIIYEYL 720
AVK + L + SF F E Q + H IV Y G P +I+ EY+
Sbjct: 40 VAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 721 ESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG 780
+ +L I+ + + + + VI AL + H N I+HRD+ N+++
Sbjct: 99 DGVTLRDIVHTEGP---MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISAT 152
Query: 781 YEAHVSDFGIAKFLNPDSSNWSELA---GTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
V DFGIA+ + ++ ++ A GT Y++PE A V + DVYS G + EV
Sbjct: 153 NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
Query: 838 IKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESR 895
+ G+ P F + + +P PS + + V L +NPE+R
Sbjct: 213 LTGEPP----FTGDSPVSVAYQHVREDPIP-PSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 80/312 (25%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHR 698
+G G G V A K + AVK P ++E ++E++ L+ + H
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 103
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL--------DKILCNDASAKELGWTQRL------ 744
NIV G C+ + +I EY G L D +C+ S + +
Sbjct: 104 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 745 -----NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
V KG+A F NC +HRD++++N+LL G + DFG+A+ + D S
Sbjct: 164 LSFSYQVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND-S 215
Query: 800 NWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXX 856
N+ ++APE + T + DV+S+G+ FL+E
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI-------------FLWELFSLGSS 262
Query: 857 XXIEMLDSRLPYPSLHVQKKLMSIMQVAF-----------------SCLDQNPESRPTMK 899
PYP + V K +++ F +C D +P RPT K
Sbjct: 263 ----------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 312
Query: 900 RVSQLLCEKIFE 911
++ QL+ ++I E
Sbjct: 313 QIVQLIEKQISE 324
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 646 IGKGGHGSV----YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
IGKG G V YR G AVK + + FL E +T++RH N+V
Sbjct: 20 IGKGEFGDVMLGDYR-----GNKVAVKCIKNDATAQ------AFLAEASVMTQLRHSNLV 68
Query: 702 KFYGFCSHPKHS-FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ G K +I+ EY+ GSL L + + LG L V +A+ YL N
Sbjct: 69 QLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN 127
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
F VHRD++++NVL+ A VSDFG+ K SS + APE
Sbjct: 128 NF---VHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREAA 181
Query: 821 VTEKCDVYSFGVLALEV 837
+ K DV+SFG+L E+
Sbjct: 182 FSTKSDVWSFGILLWEI 198
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 80/312 (25%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHR 698
+G G G V A K + AVK P ++E ++E++ L+ + H
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 105
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL--------DKILCNDASAKELGWTQ-------- 742
NIV G C+ + +I EY G L D +C+ S + +
Sbjct: 106 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 743 ---RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
V KG+A F NC +HRD++++N+LL G + DFG+A+ + D S
Sbjct: 166 LSFSYQVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND-S 217
Query: 800 NWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXX 856
N+ ++APE + T + DV+S+G+ FL+E
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI-------------FLWELFSLGSS 264
Query: 857 XXIEMLDSRLPYPSLHVQKKLMSIMQVAF-----------------SCLDQNPESRPTMK 899
PYP + V K +++ F +C D +P RPT K
Sbjct: 265 ----------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 314
Query: 900 RVSQLLCEKIFE 911
++ QL+ ++I E
Sbjct: 315 QIVQLIEKQISE 326
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 39/223 (17%)
Query: 646 IGKGGHGSVYRAKVPS------GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
IG+G G V++A+ P + AVK +M Q +F E + E + N
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADM---QADFQREAALMAEFDNPN 111
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKIL--------C----NDASAKE---------L 738
IVK G C+ K +++EY+ G L++ L C +D S + L
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 739 GWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS 798
++L + + VA + YL F VHRD++++N L+ ++DFG+++ N S
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSR--NIYS 226
Query: 799 SNWSELAGTHG----YVAPELAYTLKVTEKCDVYSFGVLALEV 837
+++ + G ++ PE + + T + DV+++GV+ E+
Sbjct: 227 ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 24/264 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G G G V+ AVK G MS + FL E + +++H+ +V+ Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQ---GSMS--PDAFLAEANLMKQLQHQRLVRLYA 71
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ + +II EY+E+GSL L S +L + L++ +A+ + ++ +
Sbjct: 72 VVTQ-EPIYIITEYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEERNY--- 126
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH-GYVAPELAYTLKVTEK 824
+HR++ + N+L+ ++DFG+A+ + + E A + APE T K
Sbjct: 127 IHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 825 CDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDS--RLPYPSLHVQKKLMSIM 881
DV+SFG+L E++ G+ P + I+ L+ R+ P + ++L +M
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPGM------TNPEVIQNLERGYRMVRPD-NCPEELYQLM 239
Query: 882 QVAFSCLDQNPESRPTMKRVSQLL 905
++ C + PE RPT + +L
Sbjct: 240 RL---CWKERPEDRPTFDYLRSVL 260
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW---SELAGTHGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L + ++ + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 246
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 247 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 275
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 74
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I EYL GSL L + + + L + + YL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HR+++++N+L++ + DFG+ K L D + + APE
Sbjct: 133 TKRY---IHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPES 189
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 249
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 250 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 290
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 124/312 (39%), Gaps = 80/312 (25%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHR 698
+G G G V A K + AVK P ++E ++E++ L+ + H
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK---PSAHLTEREALMSELKVLSYLGNHM 110
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL--------DKILCNDASAKELGWTQ-------- 742
NIV G C+ + +I EY G L D +C+ S + +
Sbjct: 111 NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 743 ---RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
V KG+A F NC +HRD++++N+LL G + DFG+A+ + D S
Sbjct: 171 LSFSYQVAKGMA---FLASKNC----IHRDLAARNILLTHGRITKICDFGLARDIKND-S 222
Query: 800 NWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXX 856
N+ ++APE + T + DV+S+G+ FL+E
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI-------------FLWELFSLGSS 269
Query: 857 XXIEMLDSRLPYPSLHVQKKLMSIMQVAF-----------------SCLDQNPESRPTMK 899
PYP + V K +++ F +C D +P RPT K
Sbjct: 270 ----------PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFK 319
Query: 900 RVSQLLCEKIFE 911
++ QL+ ++I E
Sbjct: 320 QIVQLIEKQISE 331
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+DF +G G G V + + PSG I A K H + + Q + E+Q L E
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ---IIRELQVLHECN 72
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE--LGWTQRLNVIKGVADAL 754
IV FYG I E+++ GSLD++L E LG + V++G+A
Sbjct: 73 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS-IAVLRGLA--- 128
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
YL I+HRD+ N+L++ E + DFG++ L +N GT Y+APE
Sbjct: 129 -YLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMAPE 183
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G+ +E+ G++P
Sbjct: 184 RLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 31/281 (11%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +GE+ AVKK + +F EI+ L ++H NI
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR----DFEREIEILKSLQHDNI 76
Query: 701 VKFYGFC--SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G C + ++ +I E+L GSL + L + + + L + + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ +HRD++++N+L++ + DFG+ K L D + APE
Sbjct: 135 TKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 816 AYTLKVTEKCDVYSFGVLALEVI----KGKH-PRDFLF-----EXXXXXXXXXIEML--D 863
K + DV+SFGV+ E+ K K P +F+ + IE+L +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNN 251
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904
RLP P + M + + + ++Q P R RV Q+
Sbjct: 252 GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 292
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G G+V++ +P GE + K G SFQ + + A+ + H +IV
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA--VTDHMLAIGSLDHAHIV 96
Query: 702 KFYGFCSHPKHSF-IIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
+ G C P S ++ +YL GSL D + + + LG LN +A ++YL
Sbjct: 97 RLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGA---LGPQLLLNWGVQIAKGMYYLEE 151
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAY 817
+ +VHR+++++NVLL + V+DFG+A L PD +SE ++A E +
Sbjct: 152 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
K T + DV+S+GV E++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELM 229
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G G+V++ +P GE + K G SFQ + + A+ + H +IV
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQA--VTDHMLAIGSLDHAHIV 78
Query: 702 KFYGFCSHPKHSF-IIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
+ G C P S ++ +YL GSL D + + + LG LN +A ++YL
Sbjct: 79 RLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGA---LGPQLLLNWGVQIAKGMYYLEE 133
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAY 817
+ +VHR+++++NVLL + V+DFG+A L PD +SE ++A E +
Sbjct: 134 HG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
K T + DV+S+GV E++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELM 211
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 22/267 (8%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+GKGG + + + E+FA K L + Q+E+ EI + H+++V F+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
GF F++ E SL ++ K L + ++ + YLH N
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---R 137
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
++HRD+ N+ L+ E + DFG+A + D L GT Y+APE+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 825 CDVYSFGVLALEVIKGKHPRDFLFEXX-XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQV 883
DV+S G + ++ GK P FE I+ + +P H+ S++Q
Sbjct: 198 VDVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEYSIPK---HINPVAASLIQ- 249
Query: 884 AFSCLDQNPESRPTMKRVSQLLCEKIF 910
L +P +RPT +++LL ++ F
Sbjct: 250 --KMLQTDPTARPT---INELLNDEFF 271
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 22/267 (8%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+GKGG + + + E+FA K L + Q+E+ EI + H+++V F+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
GF F++ E SL ++ K L + ++ + YLH N
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---R 137
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
++HRD+ N+ L+ E + DFG+A + D L GT Y+APE+ + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 825 CDVYSFGVLALEVIKGKHPRDFLFEXX-XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQV 883
DV+S G + ++ GK P FE I+ + +P H+ S++Q
Sbjct: 198 VDVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEYSIPK---HINPVAASLIQ- 249
Query: 884 AFSCLDQNPESRPTMKRVSQLLCEKIF 910
L +P +RPT +++LL ++ F
Sbjct: 250 --KMLQTDPTARPT---INELLNDEFF 271
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 44/300 (14%)
Query: 638 NDFNAEHCIGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
N+ +G G G V A K + AVK S + ++E ++E++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD---EKEALMSELKI 102
Query: 692 LTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-------DKILCND---ASAKELGW 740
++ + +H NIV G C+H +I EY G L ++L D A A
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 741 TQRL-----NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795
T+ L V +G+A F NC +HRD++++NVLL G+ A + DFG+A+ +
Sbjct: 163 TRDLLHFSSQVAQGMA---FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 796 PDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
D SN+ ++APE + T + DV+S+G+L E+ G +P +
Sbjct: 216 ND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--- 271
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+ ++ P+ K + SIMQ +C P RPT +++ L E+ E
Sbjct: 272 VNSKFYKLVKDGYQMAQPAF-APKNIYSIMQ---ACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 28/209 (13%)
Query: 647 GKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGF 706
+G G V++A++ + E AVK F P+ + S+Q E E+ +L ++H NI++F G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIF--PIQDKQSWQNE---YEVYSLPGMKHENILQFIGA 86
Query: 707 ----CSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC- 761
S ++I + E GSL L A + W + ++ + +A L YLH +
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIP 142
Query: 762 ------FPPIVHRDISSKNVLLDLGYEAHVSDFGIA-KFLNPDSSNWSE-LAGTHGYVAP 813
P I HRDI SKNVLL A ++DFG+A KF S+ + GT Y+AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 814 E-----LAYTLKVTEKCDVYSFGVLALEV 837
E + + + D+Y+ G++ E+
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 120/266 (45%), Gaps = 13/266 (4%)
Query: 639 DFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQ-QEEFLNEIQALTEIR 696
+F E IG+G VYRA + G A+KK + M + + + + EI L ++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ--IFDLMDAKARADCIKEIDLLKQLN 90
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL-NVIKGVADALF 755
H N++K+Y I+ E ++G L +++ + K L + + + AL
Sbjct: 91 HPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE 150
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
++H+ ++HRDI NV + + D G+ +F + ++ L GT Y++PE
Sbjct: 151 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQK 875
+ K D++S G L E+ + P + + IE D P PS H +
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPF-YGDKMNLYSLCKKIEQCDYP-PLPSDHYSE 265
Query: 876 KLMSIMQVAFSCLDQNPESRPTMKRV 901
+L ++ + C++ +PE RP + V
Sbjct: 266 ELRQLVNM---CINPDPEKRPDVTYV 288
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEM---SFQQEEFLNEIQALTEIRHRNIV 701
+GKGG + + + E+FA K +P + Q+E+ EI + H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 84
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF F++ E SL ++ K L + ++ + YLH N
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN- 140
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ E + DFG+A + D L GT Y+APE+
Sbjct: 141 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 822 TEKCDVYSFGVLALEVIKGKHPRDFLFEXX-XXXXXXXIEMLDSRLPYPSLHVQKKLMSI 880
+ + DV+S G + ++ GK P FE I+ + +P H+ S+
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEYSIPK---HINPVAASL 251
Query: 881 MQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910
+Q L +P +RPT +++LL ++ F
Sbjct: 252 IQ---KMLQTDPTARPT---INELLNDEFF 275
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGT-HGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L N D E + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 199
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 252
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 253 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 281
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 74/269 (27%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGT-HGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L N D E + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTR 189
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 242
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 136
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW---SELAGTHGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L + ++ + APE T
Sbjct: 137 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 246
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 247 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 275
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW---SELAGTHGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L + ++ + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 242
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 142
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW---SELAGTHGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L + ++ + APE T
Sbjct: 143 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 199
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 200 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 252
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 253 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 281
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 69.7 bits (169), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 108/269 (40%), Gaps = 20/269 (7%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVK-KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G G V R + PSG+ +V K P ++F+ E+ A+ + HRN+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
YG P ++ E GSL L LG R V VA+ + YL + F
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV--QVAEGMGYLESKRF 132
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW---SELAGTHGYVAPELAYTL 819
+HRD++++N+LL + DFG+ + L + ++ + APE T
Sbjct: 133 ---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
+ D + FGV E+ G+ P I+ RLP P Q
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKEGERLPRPEDCPQ---- 242
Query: 879 SIMQVAFSCLDQNPESRPTMKRVSQLLCE 907
I V C PE RPT + L E
Sbjct: 243 DIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 69.7 bits (169), Expect = 8e-12, Method: Composition-based stats.
Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
DF C+G+GG G V+ AK + +A+K+ P +E+ + E++AL ++ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP---NRELAREKVMREVKALAKLEH 62
Query: 698 RNIVKFYGFC-----------SHPK-HSFIIYEYLESGSLDKILCNDASAKELGWTQRLN 745
IV+++ S PK + +I + +L + + +E + L+
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA 805
+ +A+A+ +LH+ ++HRD+ N+ + V DFG+ ++ D + L
Sbjct: 123 IFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 806 ------------GTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXX 853
GT Y++PE + + K D++S G++ E++ +P E
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQMERVRT 236
Query: 854 XXXXXIEMLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRP 896
+ D R L +P L QK + V L +P RP
Sbjct: 237 -------LTDVRNLKFPPLFTQKYPCEYVMVQ-DMLSPSPMERP 272
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 118/267 (44%), Gaps = 22/267 (8%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+GKGG + + + E+FA K L + Q+E+ EI + H+++V F+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
GF F++ E SL ++ K L + ++ + YLH N
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN---R 135
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
++HRD+ N+ L+ E + DFG+A + D L GT Y+APE+ + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 825 CDVYSFGVLALEVIKGKHPRDFLFEXX-XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQV 883
DV+S G + ++ GK P FE I+ + +P H+ S++Q
Sbjct: 196 VDVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEYSIPK---HINPVAASLIQ- 247
Query: 884 AFSCLDQNPESRPTMKRVSQLLCEKIF 910
L +P +RPT +++LL ++ F
Sbjct: 248 --KMLQTDPTARPT---INELLNDEFF 269
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 23/264 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G G+VY+ VP GE + K + G + EF++E + + H ++V
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA--NVEFMDEALIMASMDHPHLV 80
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+ G C P + + + G L + + +G LN +A + YL
Sbjct: 81 RLLGVCLSPTIQLVT-QLMPHGCLLEYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEER- 136
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAYTL 819
+VHRD++++NVL+ ++DFG+A+ L D ++ G ++A E +
Sbjct: 137 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
K T + DV+S+GV E++ G P D + E RLP P + +
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE----RLPQPPICT----I 246
Query: 879 SIMQVAFSCLDQNPESRPTMKRVS 902
+ V C + +SRP K ++
Sbjct: 247 DVYMVMVKCWMIDADSRPKFKELA 270
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 105/224 (46%), Gaps = 32/224 (14%)
Query: 639 DFNAEHC-----IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL 692
DF AE IG+G +GSV + PSG+I AVK+ S + + +Q++ L ++ +
Sbjct: 18 DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK---EQKQLLMDLDVV 74
Query: 693 TEIRHRN---IVKFYGFCSHPKHSFIIYEYLESGSLDKI------LCNDASAKELGWTQR 743
+R + IV+FYG +I E L S S DK + +D +E+
Sbjct: 75 --MRSSDCPYIVQFYGALFREGDCWICME-LMSTSFDKFYKYVYSVLDDVIPEEILGKIT 131
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSE 803
L +K AL +L N I+HRDI N+LLD + DFGI+ L DS +
Sbjct: 132 LATVK----ALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTR 184
Query: 804 LAGTHGYVAPEL----AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
AG Y+APE A + DV+S G+ E+ G+ P
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEM---SFQQEEFLNEIQALTEIRHRNIV 701
+GKGG + + + E+FA K +P + Q+E+ EI + H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 102
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF F++ E SL ++ K L + ++ + YLH N
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN- 158
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ E + DFG+A + D L GT Y+APE+
Sbjct: 159 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 216
Query: 822 TEKCDVYSFGVLALEVIKGKHPRDFLFEXX-XXXXXXXIEMLDSRLPYPSLHVQKKLMSI 880
+ + DV+S G + ++ GK P FE I+ + +P H+ S+
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEYSIPK---HINPVAASL 269
Query: 881 MQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910
+Q L +P +RPT +++LL ++ F
Sbjct: 270 IQ---KMLQTDPTARPT---INELLNDEFF 293
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 114/264 (43%), Gaps = 23/264 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G G+VY+ VP GE + K + G + EF++E + + H ++V
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKA--NVEFMDEALIMASMDHPHLV 103
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+ G C P + + + G L + + +G LN +A + YL
Sbjct: 104 RLLGVCLSPTIQLVT-QLMPHGCLLEYV--HEHKDNIGSQLLLNWCVQIAKGMMYLEER- 159
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAYTL 819
+VHRD++++NVL+ ++DFG+A+ L D ++ G ++A E +
Sbjct: 160 --RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 820 KVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
K T + DV+S+GV E++ G P D + E RLP P + +
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE----RLPQPPICT----I 269
Query: 879 SIMQVAFSCLDQNPESRPTMKRVS 902
+ V C + +SRP K ++
Sbjct: 270 DVYMVMVKCWMIDADSRPKFKELA 293
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 119/270 (44%), Gaps = 28/270 (10%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEM---SFQQEEFLNEIQALTEIRHRNIV 701
+GKGG + + + E+FA K +P + Q+E+ EI + H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKI----VPKSLLLKPHQREKMSMEISIHRSLAHQHVV 104
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF F++ E SL ++ K L + ++ + YLH N
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLEL---HKRRKALTEPEARYYLRQIVLGCQYLHRN- 160
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ E + DFG+A + D L GT Y+APE+
Sbjct: 161 --RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 218
Query: 822 TEKCDVYSFGVLALEVIKGKHPRDFLFEXX-XXXXXXXIEMLDSRLPYPSLHVQKKLMSI 880
+ + DV+S G + ++ GK P FE I+ + +P H+ S+
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPP----FETSCLKETYLRIKKNEYSIPK---HINPVAASL 271
Query: 881 MQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910
+Q L +P +RPT +++LL ++ F
Sbjct: 272 IQ---KMLQTDPTARPT---INELLNDEFF 295
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 681 QQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA---- 735
++E ++E++ ++ + +H NIV G C+H +I EY G L L A A
Sbjct: 77 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGP 136
Query: 736 ------------KELGWTQRL--------NVIKGVADALFYLHNNCFPPIVHRDISSKNV 775
KE G L V +G+A F NC +HRD++++NV
Sbjct: 137 SLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMA---FLASKNC----IHRDVAARNV 189
Query: 776 LLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGV 832
LL G+ A + DFG+A+ + D SN+ ++APE + T + DV+S+G+
Sbjct: 190 LLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 248
Query: 833 LALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQN 891
L E+ G +P + + ++ P+ K + SIMQ +C
Sbjct: 249 LLWEIFSLGLNPYPGIL---VNSKFYKLVKDGYQMAQPAF-APKNIYSIMQ---ACWALE 301
Query: 892 PESRPTMKRVSQLLCEKIFE 911
P RPT +++ L E+ E
Sbjct: 302 PTHRPTFQQICSFLQEQAQE 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 58/295 (19%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+DF +G+G G V +A+ +A+KK + L+E+ L +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASL 59
Query: 696 RHRNIVKFYG-----------FCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQ 742
H+ +V++Y + K S FI EY E+G+L ++ ++ ++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN------- 795
RL + + +AL Y+H+ I+HRD+ N+ +D + DFG+AK ++
Sbjct: 120 RL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 796 ------PDSS-NWSELAGTHGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
P SS N + GT YVA E L T EK D+YS G++ E+I +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-------YP 227
Query: 848 FEXXXXXXXXXIEMLDSRLPYP------SLHVQKKLMSIMQVAFSCLDQNPESRP 896
F ++ + +P + V+KK++ ++ +D +P RP
Sbjct: 228 FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLL------IDHDPNKRP 276
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 44/300 (14%)
Query: 638 NDFNAEHCIGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
N+ +G G G V A K + AVK S + ++E ++E++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHAD---EKEALMSELKI 102
Query: 692 LTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-------DKILCND---ASAKELGW 740
++ + +H NIV G C+H +I EY G L ++L D A A
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 741 TQRL-----NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795
T+ L V +G+A F NC +HRD++++NVLL G+ A + DFG+A+ +
Sbjct: 163 TRDLLHFSSQVAQGMA---FLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 796 PDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
D SN+ ++APE + T + DV+S+G+L E+ G +P +
Sbjct: 216 ND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL--- 271
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911
+ ++ P+ K + SIMQ +C P RPT +++ L E+ E
Sbjct: 272 VNSKFYKLVKDGYQMAQPAF-APKNIYSIMQ---ACWALEPTHRPTFQQICSFLQEQAQE 327
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 646 IGKGGHGSVYRAKVP-SGEIFAVKKFH-SPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
+G G V+ K +G++FA+K SP +F+ NEI L +I+H NIV
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSP-----AFRDSSLENEIAVLKKIKHENIVTL 71
Query: 704 YGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELG-WTQRLN--VIKGVADALFYLHN 759
H +++ + + G L D+IL E G +T++ VI+ V A+ YLH
Sbjct: 72 EDIYESTTHYYLVMQLVSGGELFDRIL-------ERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 760 NCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
N IVHRD+ +N+L + + ++DFG++K + S GT GYVAPE+
Sbjct: 125 N---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM--EQNGIMSTACGTPGYVAPEVL 179
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGKHP 843
++ D +S GV+ ++ G P
Sbjct: 180 AQKPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+++++ + +GKG V R +G FA K ++ FQ+ E E + ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADAL 754
+H NIV+ + +++++ + G L D A+E + I+ + +++
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 117
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
Y H+N IVHR++ +N+LL G ++DFG+A +N DS W AGT GY+
Sbjct: 118 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 173
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PE+ ++ D+++ GV+ ++ G P
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+++++ + +GKG V R +G FA K ++ FQ+ E E + ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADAL 754
+H NIV+ + +++++ + G L D A+E + I+ + +++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 118
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
Y H+N IVHR++ +N+LL G ++DFG+A +N DS W AGT GY+
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 174
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PE+ ++ D+++ GV+ ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALT 693
S T+++ +GKG V R K+P+G+ +A K ++ Q+ E E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE--REARICR 58
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVAD 752
++H NIV+ + S +++++ + G L D A+E + I+ + +
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILE 114
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
++ + H N IVHRD+ +N+LL G ++DFG+A + D W AGT G
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y++PE+ + D+++ GV+ ++ G P
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELG-WTQR- 743
NEI L +I+H NIV H ++I + + G L D+I+ E G +T+R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERD 117
Query: 744 -LNVIKGVADALFYLHNNCFPPIVHRDISSKNVL---LDLGYEAHVSDFGIAKFLNPDSS 799
+I V DA+ YLH+ IVHRD+ +N+L LD + +SDFG++K +P S
Sbjct: 118 ASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GS 173
Query: 800 NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
S GT GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELG-WTQR- 743
NEI L +I+H NIV H ++I + + G L D+I+ E G +T+R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERD 117
Query: 744 -LNVIKGVADALFYLHNNCFPPIVHRDISSKNVL---LDLGYEAHVSDFGIAKFLNPDSS 799
+I V DA+ YLH+ IVHRD+ +N+L LD + +SDFG++K +P S
Sbjct: 118 ASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GS 173
Query: 800 NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
S GT GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
+G+G +V+R + +G++FA+K F++ +SF + + + E + L ++ H+NIVK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-----ISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 703 FYGFCSH--PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ +H +I E+ GSL +L ++A L ++ L V++ V + +L N
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 761 CFPPIVHRDISSKNVLLDLGYEAH----VSDFGIAKFLNPDSSNWSELAGTHGYVAPEL- 815
IVHR+I N++ +G + ++DFG A+ L D + L GT Y+ P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVSLYGTEEYLHPDMY 187
Query: 816 -------AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ K D++S GV G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 20/258 (7%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG V+ A+ + AVK + L + SF F E Q + H IV Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLR-FRREAQNAAALNHPAIVAVY 95
Query: 705 --GFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
G P +I+ EY++ +L I+ + + + VI AL + H N
Sbjct: 96 DTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP---KRAIEVIADACQALNFSHQN 152
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA---GTHGYVAPELAY 817
I+HRD+ N+++ V DFGIA+ + ++ ++ A GT Y++PE A
Sbjct: 153 ---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKL 877
V + DVYS G + EV+ G+ P F + + +P PS +
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIP-PSARHEGLS 264
Query: 878 MSIMQVAFSCLDQNPESR 895
+ V L +NPE+R
Sbjct: 265 ADLDAVVLKALAKNPENR 282
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E ++++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 18/164 (10%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELG-WTQR- 743
NEI L +I+H NIV H ++I + + G L D+I+ E G +T+R
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV-------EKGFYTERD 117
Query: 744 -LNVIKGVADALFYLHNNCFPPIVHRDISSKNVL---LDLGYEAHVSDFGIAKFLNPDSS 799
+I V DA+ YLH+ IVHRD+ +N+L LD + +SDFG++K +P S
Sbjct: 118 ASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP-GS 173
Query: 800 NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
S GT GYVAPE+ ++ D +S GV+A ++ G P
Sbjct: 174 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSF---QQEEFLNEIQALTEIRHRNIV 701
+GKGG Y + + E+FA K +P M Q+E+ EI + + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 89
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF +++ E SL ++ + E + ++ + YLHNN
Sbjct: 90 GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTE---PEARYFMRQTIQGVQYLHNN- 145
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ + + DFG+A + D +L GT Y+APE+
Sbjct: 146 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G + ++ GK P
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPP 225
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 104/215 (48%), Gaps = 26/215 (12%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQ--EEFLNEIQALTEIRHRNIVK 702
+G+G +V+R + +G++FA+K F++ +SF + + + E + L ++ H+NIVK
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN-----ISFLRPVDVQMREFEVLKKLNHKNIVK 71
Query: 703 FYGFCSH--PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ +H +I E+ GSL +L ++A L ++ L V++ V + +L N
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131
Query: 761 CFPPIVHRDISSKNVLLDLGYEAH----VSDFGIAKFLNPDSSNWSELAGTHGYVAPEL- 815
IVHR+I N++ +G + ++DFG A+ L D + L GT Y+ P++
Sbjct: 132 G---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-DDEQFVXLYGTEEYLHPDMY 187
Query: 816 -------AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ K D++S GV G P
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 93/210 (44%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E ++++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 121/272 (44%), Gaps = 34/272 (12%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQ-ALTEIRHRNIVKF 703
+G+G +G V + + VPSG+I AVK+ + + S +Q+ L ++ ++ + V F
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATV---NSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA----DALFYLHN 759
YG +I E +++ SLDK + G T +++ +A AL +LH+
Sbjct: 116 YGALFREGDVWICMELMDT-SLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL---- 815
++HRD+ NVL++ + + DFGI+ +L DS + AG Y+APE
Sbjct: 172 KL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPE 228
Query: 816 ----AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSL 871
Y++ K D++S G+ +E+ + P D E P P L
Sbjct: 229 LNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE------PSPQL 278
Query: 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903
K + CL +N + RPT + Q
Sbjct: 279 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 124/300 (41%), Gaps = 56/300 (18%)
Query: 645 CIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
C+GKG +G V+R + GE AVK F S E S+ +E EI +RH NI+ F
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSR--DEQSWFRE---TEIYNTVLLRHDNILGFI 68
Query: 705 GFCSHPKHS----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
++S ++I Y E GSL L L L + A L +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVE 124
Query: 761 CF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-----GTHGY 810
F P I HRD S+NVL+ + ++D G+A ++ S++ ++ GT Y
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRY 183
Query: 811 VAPELAYTLKVTEKC-------DVYSFGVLALEVIKGK----------------HPRDFL 847
+APE+ ++ C D+++FG++ E+ + P D
Sbjct: 184 MAPEV-LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPS 242
Query: 848 FEXXXXXXXXXIEMLDSRLPY--PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
FE + +D + P L L + Q+ C NP +R T R+ + L
Sbjct: 243 FE-----DMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTL 297
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 67.8 bits (164), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/276 (25%), Positives = 122/276 (44%), Gaps = 42/276 (15%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI---- 700
+G+G +G V + + VPSG+I AVK+ + + + +Q+ L ++ +I R +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQ---EQKRLLMDL----DISMRTVDCPF 67
Query: 701 -VKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA----DALF 755
V FYG +I E +++ SLDK + G T +++ +A AL
Sbjct: 68 TVTFYGALFREGDVWICMELMDT-SLDKFY---KQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
+LH+ ++HRD+ NVL++ + + DFGI+ +L D + + AG Y+APE
Sbjct: 124 HLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID-AGCKPYMAPER 180
Query: 816 --------AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLP 867
Y++ K D++S G+ +E+ + P D E P
Sbjct: 181 INPELNQKGYSV----KSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEE------P 230
Query: 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903
P L K + CL +N + RPT + Q
Sbjct: 231 SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 14/202 (6%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEM---SFQQEEFLNEIQALTEIRHRNIV 701
+GKGG Y + + E+FA K +P M Q+E+ EI + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF +++ E SL ++ K + + ++ + YLHNN
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ + + DFG+A + D +L GT Y+APE+
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G + ++ GK P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 145
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 146 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 200
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 201 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 209
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 170
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 171 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 225
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 226 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 160
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 161 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 215
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 216 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 194
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + + + G
Sbjct: 195 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 249
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 250 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 180
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 181 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 235
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 236 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 154 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 208
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 209 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 67.0 bits (162), Expect = 4e-11, Method: Composition-based stats.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 639 DFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
DF IG GG G V++AK G+ + +K+ + + E+ E++AL ++ H
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR--------VKYNNEKAEREVKALAKLDH 63
Query: 698 RNIVKFY----GFCSHPKHS------------FIIYEYLESGSLDKILCNDASAKELGWT 741
NIV + GF P+ S FI E+ + G+L++ + ++L
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKV 122
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
L + + + + Y+H+ +++RD+ N+ L + + DFG+ L D
Sbjct: 123 LALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR- 178
Query: 802 SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEM 861
GT Y++PE + ++ D+Y+ G++ E++ H D FE
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAFETSKF-------F 228
Query: 862 LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
D R S KK +++Q L + PE RP + + L
Sbjct: 229 TDLRDGIISDIFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTL 269
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 171
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + + + G
Sbjct: 172 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RAGYYRKGGCAMLP 226
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 227 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 155 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY--RASYYRKGGCAMLP 209
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 210 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 27/210 (12%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G G G VY +V PS AVK LP S Q E +FL E +++ H+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKT----LPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----CNDASAKELGWTQRLNVIKGVADAL 754
NIV+ G FI+ E + G L L + L L+V + +A
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
YL N F +HRDI+++N LL G A + DFG+A+ + +++ G
Sbjct: 169 QYLEENHF---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY--RASYYRKGGCAMLP 223
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++ PE T K D +SFGVL E+
Sbjct: 224 VKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G +G VY+AK G I A+K+ L E + EI L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQ--RLNVIKGVADALFYLHNNCFP 763
+ +++E++E L K+L + + + + +++GVA + H +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HCHQH--- 138
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVT 822
I+HRD+ +N+L++ ++DFG+A+ +++ T Y AP+ L + K +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 823 EKCDVYSFGVLALEVIKGK 841
D++S G + E+I GK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 13/199 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G +G VY+AK G I A+K+ L E + EI L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQ--RLNVIKGVADALFYLHNNCFP 763
+ +++E++E L K+L + + + + +++GVA + H +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVA----HCHQH--- 138
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVT 822
I+HRD+ +N+L++ ++DFG+A+ +++ T Y AP+ L + K +
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYS 198
Query: 823 EKCDVYSFGVLALEVIKGK 841
D++S G + E+I GK
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 17/221 (7%)
Query: 633 IISATND------FNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF 685
I SAT++ + + IGKG V A+ V +G AVK S Q+
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK--L 61
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLN 745
E++ + + H NIVK + K +++ EY G + L KE +
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF- 120
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA 805
+ + A+ Y H IVHRD+ ++N+LLD ++DFG + +
Sbjct: 121 --RQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTV-GNKLDTFC 174
Query: 806 GTHGYVAPELAYTLKVT-EKCDVYSFGVLALEVIKGKHPRD 845
G+ Y APEL K + DV+S GV+ ++ G P D
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEM---SFQQEEFLNEIQALTEIRHRNIV 701
+GKGG Y + + E+FA K +P M Q+E+ EI + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF +++ E SL ++ K + + ++ + YLHNN
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ + + DFG+A + D L GT Y+APE+
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G + ++ GK P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEM---SFQQEEFLNEIQALTEIRHRNIV 701
+GKGG Y + + E+FA K +P M Q+E+ EI + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKV----VPKSMLLKPHQKEKMSTEIAIHKSLDNPHVV 105
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
F+GF +++ E SL ++ K + + ++ + YLHNN
Sbjct: 106 GFHGFFEDDDFVYVVLEICRRRSLLEL---HKRRKAVTEPEARYFMRQTIQGVQYLHNN- 161
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
++HRD+ N+ L+ + + DFG+A + D L GT Y+APE+
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
+ + D++S G + ++ GK P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPP 241
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 31/250 (12%)
Query: 681 QQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA---- 735
++E ++E++ ++ + +H NIV G C+H +I EY G L L
Sbjct: 92 EKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEY 151
Query: 736 ---------KELGWTQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHV 785
++L L+ VA + +L + NC +HRD++++NVLL G+ A +
Sbjct: 152 SYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKI 207
Query: 786 SDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GK 841
DFG+A+ + D SN+ ++APE + T + DV+S+G+L E+ G
Sbjct: 208 GDFGLARDIMND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 842 HPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
+P + + ++ P+ K + SIMQ +C P RPT +++
Sbjct: 267 NPYPGIL---VNSKFYKLVKDGYQMAQPAF-APKNIYSIMQ---ACWALEPTHRPTFQQI 319
Query: 902 SQLLCEKIFE 911
L E+ E
Sbjct: 320 CSFLQEQAQE 329
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 639 DFNAEHCI-GKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
D N + + GKG +G VY + S ++ A+K+ +P S + EI ++
Sbjct: 8 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLK 63
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
H+NIV++ G S I E + GSL +L + + K + + L Y
Sbjct: 64 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 123
Query: 757 LHNNCFPPIVHRDISSKNVLLDLGYEA--HVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
LH+N IVHRDI NVL++ Y +SDFG +K L + GT Y+APE
Sbjct: 124 LHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE 179
Query: 815 L--AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
+ + D++S G +E+ GK P L E + + +P
Sbjct: 180 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP----- 234
Query: 873 VQKKLMSIMQVAF--SCLDQNPESR 895
+ MS AF C + +P+ R
Sbjct: 235 ---ESMSAEAKAFILKCFEPDPDKR 256
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AV+ S Q+ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKL 78
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + E G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 125/300 (41%), Gaps = 44/300 (14%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSF 680
L F+G E +D +G+G +G V + + VPSG+I AVK+ + + S
Sbjct: 20 LYFQG--AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV---NSQ 74
Query: 681 QQEEFLNEIQALTEIRHRNI-----VKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA 735
+Q+ L ++ +I R + V FYG +I E L SLDK
Sbjct: 75 EQKRLLXDL----DISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFY---KQV 126
Query: 736 KELGWTQRLNVIKGVA----DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791
+ G T +++ +A AL +LH+ ++HRD+ NVL++ + DFGI+
Sbjct: 127 IDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGIS 184
Query: 792 KFLNPDSSNWSELAGTHGYVAPEL--------AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+L D + + AG Y APE Y++ K D++S G+ +E+ + P
Sbjct: 185 GYLVDDVAKDID-AGCKPYXAPERINPELNQKGYSV----KSDIWSLGITXIELAILRFP 239
Query: 844 RDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903
D E P P L K + CL +N + RPT + Q
Sbjct: 240 YDSWGTPFQQLKQVVEE------PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 102/214 (47%), Gaps = 14/214 (6%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALT 693
S T+++ +GKG V R K+P+G+ +A K ++ Q+ E E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLE--REARICR 58
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVAD 752
++H NIV+ + S +++++ + G L D A+E + I+ + +
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILE 114
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
++ + H N IVHRD+ +N+LL G ++DFG+A + D W AGT G
Sbjct: 115 SVNHCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y++PE+ + D+++ GV+ ++ G P
Sbjct: 172 YLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 19/216 (8%)
Query: 640 FNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPL----PGEMSFQQEEFLNEIQALTE 694
++ + IG+G V R +G FAVK P ++ +E E L +
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 695 IR-HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+ H +I+ F++++ + G L L + E + ++++ + +A
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE---KETRSIMRSLLEA 212
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
+ +LH N IVHRD+ +N+LLD + +SDFG + L P EL GT GY+AP
Sbjct: 213 VSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP-GEKLRELCGTPGYLAP 268
Query: 814 E-LAYTLKVT-----EKCDVYSFGVLALEVIKGKHP 843
E L ++ T ++ D+++ GV+ ++ G P
Sbjct: 269 EILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI--IYE 718
+GE AVK P + EI+ L + H NIVK+ G C+ + I I E
Sbjct: 37 TGEQVAVKSLK---PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
+L SGSL + L + + ++ Q+L + + YL + + VHRD++++NVL++
Sbjct: 94 FLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 148
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPELAYTLKVTEKCDVYSFGVLAL 835
++ + DFG+ K + D + + APE K DV+SFGV
Sbjct: 149 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 208
Query: 836 EVI 838
E++
Sbjct: 209 ELL 211
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 129/303 (42%), Gaps = 37/303 (12%)
Query: 561 PSCMSYKKASRKIWI--VIVFPLLGMVALFIA--LTGFFFIFHQRKNDSQTQQSSFGNTP 616
PSC+S + A K + +V L G V+ A LT + R + S+ +
Sbjct: 15 PSCLS-RGAHEKFSVEEYLVHALQGSVSSGQAHSLTSLAKTWAARGSRSREPSPKTEDNE 73
Query: 617 GLRSVLTFEGKIV----YEEIISATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFH 671
G+ +LT + K V EE+ AT+ +G+G G V+R + +G AVKK
Sbjct: 74 GV--LLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVR 127
Query: 672 SPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCN 731
+ F+ EE + LT R IV YG I E LE GSL +++
Sbjct: 128 LEV-----FRAEELMA-CAGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKE 178
Query: 732 DASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL-GYEAHVSDFGI 790
E + L + + L YLH+ I+H D+ + NVLL G A + DFG
Sbjct: 179 QGCLPE---DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGH 232
Query: 791 AKFLNPDSSNWSELAG-----THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845
A L PD S L G T ++APE+ K DV+S + L ++ G HP
Sbjct: 233 AVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWT 292
Query: 846 FLF 848
F
Sbjct: 293 QFF 295
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI--IYE 718
+GE AVK P + EI+ L + H NIVK+ G C+ + I I E
Sbjct: 49 TGEQVAVKSLK---PESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
+L SGSL + L + + ++ Q+L + + YL + + VHRD++++NVL++
Sbjct: 106 FLPSGSLKEYLPKNKN--KINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVE 160
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPELAYTLKVTEKCDVYSFGVLAL 835
++ + DFG+ K + D + + APE K DV+SFGV
Sbjct: 161 SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLH 220
Query: 836 EVI 838
E++
Sbjct: 221 ELL 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 639 DFNAEHCI-GKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
D N + + GKG +G VY + S ++ A+K+ +P S + EI ++
Sbjct: 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKE----IPERDSRYSQPLHEEIALHKHLK 77
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
H+NIV++ G S I E + GSL +L + + K + + L Y
Sbjct: 78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKY 137
Query: 757 LHNNCFPPIVHRDISSKNVLLDLGYEA--HVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
LH+N IVHRDI NVL++ Y +SDFG +K L + GT Y+APE
Sbjct: 138 LHDN---QIVHRDIKGDNVLINT-YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPE 193
Query: 815 L--AYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLH 872
+ + D++S G +E+ GK P L E + + +P
Sbjct: 194 IIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP----- 248
Query: 873 VQKKLMSIMQVAF--SCLDQNPESR 895
+ MS AF C + +P+ R
Sbjct: 249 ---ESMSAEAKAFILKCFEPDPDKR 270
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 54/214 (25%), Positives = 99/214 (46%), Gaps = 14/214 (6%)
Query: 635 SATNDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALT 693
S T+++ IGKG V R K+ +G +A K ++ Q+ E E +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLE--REARICR 58
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVAD 752
++H NIV+ + S +++++ + G L D A+E + I+ + +
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIQQILE 114
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
A+ + H +VHRD+ +N+LL G ++DFG+A + D W AGT G
Sbjct: 115 AVLHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPG 171
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y++PE+ + D+++ GV+ ++ G P
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 100/202 (49%), Gaps = 15/202 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+++++ + +GKG V R +G FA K ++ FQ+ E E + ++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 85
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADAL 754
+H NIV+ + +++++ + G L D A+E + I+ + +++
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 141
Query: 755 FYLHNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
Y H+N IVHR++ +N+LL G ++DFG+A +N DS W AGT GY+
Sbjct: 142 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 197
Query: 812 APELAYTLKVTEKCDVYSFGVL 833
+PE+ ++ D+++ GV+
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVI 219
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 125/295 (42%), Gaps = 58/295 (19%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+DF +G+G G V +A+ +A+KK + L+E+ L +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVMLLASL 59
Query: 696 RHRNIVKFYG-----------FCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQ 742
H+ +V++Y + K S FI EY E+ +L ++ ++ ++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN------- 795
RL + + +AL Y+H+ I+HRD+ N+ +D + DFG+AK ++
Sbjct: 120 RL--FRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 796 ------PDSS-NWSELAGTHGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
P SS N + GT YVA E L T EK D+YS G++ E+I +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-------YP 227
Query: 848 FEXXXXXXXXXIEMLDSRLPYP------SLHVQKKLMSIMQVAFSCLDQNPESRP 896
F ++ + +P + V+KK++ ++ +D +P RP
Sbjct: 228 FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLL------IDHDPNKRP 276
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 57 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 109
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 164
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 165 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 220
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 221 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 56 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 108
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 163
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 164 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 219
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 220 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G A+K S Q+ E++ + + H NIVK
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK--LFREVRIMKILNHPNIVKL 76
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K ++I EY G + L KE + + + + A+ Y H
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQK--- 130
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + G+ Y APEL K
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 190 PEVDVWSLGVILYTLVSGSLPFD 212
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 30 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 82
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 137
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 138 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 193
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 194 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEI---FAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
ND + IG+G G V +A++ + A+K+ + +F E++ L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 71
Query: 695 IRHR-NIVKFYGFCSHPKHSFIIYEYLESGSL------DKILCND-------ASAKELGW 740
+ H NI+ G C H + ++ EY G+L ++L D ++A L
Sbjct: 72 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 131
Query: 741 TQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN 800
Q L+ VA + YL F +HRD++++N+L+ Y A ++DFG+++
Sbjct: 132 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 801 WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVI 838
L Y++ T DV+S+GVL E++
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 35 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 87
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 142
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 143 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 198
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 90
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 146 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 201
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEI---FAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
ND + IG+G G V +A++ + A+K+ + +F E++ L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 81
Query: 695 IRHR-NIVKFYGFCSHPKHSFIIYEYLESGSL------DKILCND-------ASAKELGW 740
+ H NI+ G C H + ++ EY G+L ++L D ++A L
Sbjct: 82 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 141
Query: 741 TQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN 800
Q L+ VA + YL F +HRD++++N+L+ Y A ++DFG+++
Sbjct: 142 QQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 801 WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVI 838
L Y++ T DV+S+GVL E++
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 235
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 15/212 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+++++ + +GKG V R +G FA K ++ FQ+ E E + ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLE--REARICRKL 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADAL 754
+H NIV+ + +++++ + G L D A+E + I+ + +++
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGEL----FEDIVAREFYSEADASHCIQQILESI 118
Query: 755 FYLHNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
Y H+N IVHR++ +N+LL G ++DFG+A +N DS W AGT GY+
Sbjct: 119 AYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN-DSEAWHGFAGTPGYL 174
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PE+ ++ D+++ GV+ ++ G P
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G A+K S Q+ E++ + + H NIVK
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK--LFREVRIMKILNHPNIVKL 79
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K ++I EY G + L KE + + + + A+ Y H
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFRQIVSAVQYCHQK--- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + G Y APEL K
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV-GGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 193 PEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 90
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 146 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 201
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 89
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH---G 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 145 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 202 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 37 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 89
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 145 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 200
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 201 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AVK S Q+ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKL 78
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 88
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 144 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 199
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AVK S Q+ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKL 78
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 33 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 85
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 140
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---- 809
+ YL + F VHRD++++N +LD + V+DFG+A+ + D +S T
Sbjct: 141 MKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEYYSVHNKTGAKLPV 196
Query: 810 -YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 197 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AVK S Q+ E++ + + H NIVK
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKL 71
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKE---KEARAKFRQIVSAVQYCHQKF-- 126
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + G+ Y APEL K
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 91
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKEL-GWTQRLNVIKGVAD 752
N++ G C + S ++ Y++ G L + N+ + K+L G+ L V KG+
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMK- 148
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH--- 808
+L + F VHRD++++N +LD + V+DFG+A+ L+ + + G
Sbjct: 149 ---FLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPV 202
Query: 809 GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 203 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 646 IGKGGHGSV----YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G GSV YR + ++ A+K G EE + E Q + ++ + IV
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIV 73
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+ G C + ++ E G L K L +E+ + ++ V+ + YL
Sbjct: 74 RLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYT 818
F VHRD++++NVLL + A +SDFG++K L D S ++ + + APE
Sbjct: 131 F---VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 187
Query: 819 LKVTEKCDVYSFGVLALEVIK-GKHP 843
K + + DV+S+GV E + G+ P
Sbjct: 188 RKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AVK S Q+ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKL 78
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + G Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 27/225 (12%)
Query: 630 YEEIISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK-----KFHSPLPGEMSFQQE 683
Y+E++ + IG GG V A + +GE+ A+K S LP
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP-------- 53
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQ 742
EI+AL +RH++I + Y F++ EY G L D I+ D ++E +
Sbjct: 54 RIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE----E 109
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI-AKFLNPDSSNW 801
V + + A+ Y+H+ + HRD+ +N+L D ++ + DFG+ AK +
Sbjct: 110 TRVVFRQIVSAVAYVHSQGY---AHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
Query: 802 SELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGKHPRD 845
G+ Y APEL + + DV+S G+L ++ G P D
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AV+ S Q+ E++ + + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKL 78
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + G+ Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTF-GNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQ 742
+ L E+ L + H NI+K Y F ++ +++ E + G L D+I+ +
Sbjct: 82 KLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII----HRMKFNEVD 137
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSS 799
+IK V + YLH + IVHRD+ +N+LL+ + + DFG++ +
Sbjct: 138 AAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQK 193
Query: 800 NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
E GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 194 KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPP 236
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Composition-based stats.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 28/270 (10%)
Query: 641 NAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQALTEIRHRN 699
+++ IGKG G VY + ++ L QQ E FL E + + H N
Sbjct: 24 HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN 83
Query: 700 IVKFYGFCSHPKH-SFIIYEYLESGSLDKILCN---DASAKELGWTQRLNVIKGVADALF 755
++ G P+ ++ Y+ G L + + + + + K+L ++ VA +
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVARGME 138
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-----Y 810
YL F VHRD++++N +LD + V+DFG+A+ + D +S H +
Sbjct: 139 YLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKW 194
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXXXXIEMLDSRLPYP 869
A E T + T K DV+SFGVL E++ +G P + RLP P
Sbjct: 195 TALESLQTYRFTTKSDVWSFGVLLWELLTRGAPP----YRHIDPFDLTHFLAQGRRLPQP 250
Query: 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
+ L +MQ C + +P RPT +
Sbjct: 251 E-YCPDSLYQVMQ---QCWEADPAVRPTFR 276
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 15/202 (7%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G G V+R + +G +F K ++P P + NEI + ++ H ++ +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYP----LDKYTVKNEISIMNQLHHPKLINLH 114
Query: 705 GFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+I E+L G L D+I D E + +N ++ + L ++H +
Sbjct: 115 DAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSE---AEVINYMRQACEGLKHMHEHS-- 169
Query: 764 PIVHRDISSKNVLLDLGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV 821
IVH DI +N++ + + V DFG+A LNPD A T + APE+ V
Sbjct: 170 -IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTA-TAEFAAPEIVDREPV 227
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
D+++ GVL ++ G P
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 122/297 (41%), Gaps = 56/297 (18%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
DF IG GG G V++AK G+ + +++ + + E+ E++AL ++ H
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRR--------VKYNNEKAEREVKALAKLDH 64
Query: 698 RNIVKFYG----FCSHPKHS-------------------------FIIYEYLESGSLDKI 728
NIV + G F P+ S FI E+ + G+L++
Sbjct: 65 VNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQW 124
Query: 729 LCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDF 788
+ ++L L + + + + Y+H+ ++HRD+ N+ L + + DF
Sbjct: 125 I-EKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 789 GIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLF 848
G+ L D + GT Y++PE + ++ D+Y+ G++ E++ H D F
Sbjct: 181 GLVTSLKNDGKR-TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCDTAF 236
Query: 849 EXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
E D R S KK +++Q L + PE RP + + L
Sbjct: 237 ETSKF-------FTDLRDGIISDIFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTL 283
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 92
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ + C S + + + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGLKYIHS- 146
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSP-----LPGEMSFQQEEFLNEI 689
AT+ + IG G +G+VY+A+ P SG A+K P LP +S +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP--ISTVREVAL--L 57
Query: 690 QALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNV 746
+ L H N+V+ C+ + I L +D+ L + A L ++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
++ L +LH NC IVHRD+ +N+L+ G ++DFG+A+ + + + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LAPVVV 173
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGK 841
T Y APE+ D++S G + E+ + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 59
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 113
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 127/305 (41%), Gaps = 47/305 (15%)
Query: 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQE--EFLNE 688
E+++ N +G+G GSV + + ++K + + S Q+E EFL+E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 689 IQALTEIRHRNIVKFYGFCSH------PK-------------HSFIIYEYLESGSLDKIL 729
+ + H N+++ G C PK H++++Y LE+G
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETG------ 140
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
K + L + +A + YL N F +HRD++++N +L V+DFG
Sbjct: 141 -----PKHIPLQTLLKFMVDIALGMEYLSNRNF---LHRDLAARNCMLRDDMTVCVADFG 192
Query: 790 IAKFL-NPDSSNWSELAGTH-GYVAPELAYTLKVTEKCDVYSFGVLALEV-IKGKHPRDF 846
++K + + D +A ++A E T K DV++FGV E+ +G P
Sbjct: 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP--- 249
Query: 847 LFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLC 906
+ + RL P + L + ++ +SC +P RPT V +L
Sbjct: 250 -YPGVQNHEMYDYLLHGHRLKQP----EDCLDELYEIMYSCWRTDPLDRPTFS-VLRLQL 303
Query: 907 EKIFE 911
EK+ E
Sbjct: 304 EKLLE 308
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 59
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 113
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 59
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 113
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 640 FNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
+N +GKG G V + K + + +AVK + + L E++ L ++ H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA--SAKNKDTSTILREVELLKKLDHP 81
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYL 757
NI+K + +I+ E G L D+I+ K +IK V + Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYM 137
Query: 758 HNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
H + IVHRD+ +N+LL+ + + DFG++ ++ + GT Y+APE
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPE 193
Query: 815 LAYTLKVT--EKCDVYSFGVLALEVIKGKHP 843
+ L+ T EKCDV+S GV+ ++ G P
Sbjct: 194 V---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 59
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 113
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 59
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 60 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 113
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 171 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 62
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 116
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 174 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 638 NDFNAEHCIGKGGHGSV--YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQAL 692
NDF+ +GKG G V R K +G +A+K L E+ ++E + E + L
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKA-TGRYYAMK----ILRKEVIIAKDEVAHTVTESRVL 64
Query: 693 TEIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-- 749
RH + Y F +H + F++ EY G L L ++E +T+ G
Sbjct: 65 QNTRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHL-----SRERVFTEERARFYGAE 118
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ AL YLH+ +V+RDI +N++LD ++DFG+ K D + GT
Sbjct: 119 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D + GV+ E++ G+ P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 17/215 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSP-----LPGEMSFQQEEFLNEI 689
AT+ + IG G +G+VY+A+ P SG A+K P LP +S +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP--ISTVREVAL--L 57
Query: 690 QALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNV 746
+ L H N+V+ C+ + I L +D+ L + A L ++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
++ L +LH NC IVHRD+ +N+L+ G ++DFG+A+ + + + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV- 173
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGK 841
T Y APE+ D++S G + E+ + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 6e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEI---FAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
ND + IG+G G V +A++ + A+K+ + +F E++ L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKD---DHRDFAGELEVLCK 78
Query: 695 IRHR-NIVKFYGFCSHPKHSFIIYEYLESGSL------DKILCND-------ASAKELGW 740
+ H NI+ G C H + ++ EY G+L ++L D ++A L
Sbjct: 79 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 138
Query: 741 TQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN 800
Q L+ VA + YL F +HR+++++N+L+ Y A ++DFG+++
Sbjct: 139 QQLLHFAADVARGMDYLSQKQF---IHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 801 WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVI 838
L Y++ T DV+S+GVL E++
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEIV 232
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 17/215 (7%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSP-----LPGEMSFQQEEFLNEI 689
AT+ + IG G +G+VY+A+ P SG A+K P LP +S +E L +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLP--ISTVREVAL--L 57
Query: 690 QALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQRLNV 746
+ L H N+V+ C+ + I L +D+ L + A L ++
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDL 117
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
++ L +LH NC IVHRD+ +N+L+ G ++DFG+A+ + + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LDPVVV 173
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGK 841
T Y APE+ D++S G + E+ + K
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 7e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 96/225 (42%), Gaps = 26/225 (11%)
Query: 631 EEIISATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEI 689
EE+ AT+ +G+G G V+R + +G AVKK + F+ EE +
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-----FRAEELMA-C 120
Query: 690 QALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG 749
LT R IV YG I E LE GSL +++ E + L +
Sbjct: 121 AGLTSPR---IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPE---DRALYYLGQ 174
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDL-GYEAHVSDFGIAKFLNPDSSNWSELAG-- 806
+ L YLH+ I+H D+ + NVLL G A + DFG A L PD L G
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 807 ---THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLF 848
T ++APE+ K DV+S + L ++ G HP F
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFF 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 14/203 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+GKG V R KV +G+ +A K ++ Q+ E E + ++H NIV+ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 87
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADALFYLHNNCFP 763
S H ++I++ + G L D A+E + I+ + +A+ + H
Sbjct: 88 DSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQM--- 140
Query: 764 PIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
+VHRD+ +N+LL G ++DFG+A + + W AGT GY++PE+
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 821 VTEKCDVYSFGVLALEVIKGKHP 843
+ D+++ GV+ ++ G P
Sbjct: 201 YGKPVDLWACGVILYILLVGYPP 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 627 KIVYEEIISATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF 685
+IVY + ++DF + +G+G +G V A P+GEI A+KK P +
Sbjct: 4 RIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRT 56
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPK------HSFIIYEYLESGSLDKILCNDASAKELG 739
L EI+ L +H NI+ + P +II E +++ L +++ S + L
Sbjct: 57 LREIKILKHFKHENIITIFNI-QRPDSFENFNEVYIIQELMQT-DLHRVI----STQMLS 110
Query: 740 WTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
I A+ LH + ++HRD+ N+L++ + V DFG+A+ ++ ++
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 800 NWSELAG----------THGYVAPELAYT-LKVTEKCDVYSFGVLALEV 837
+ SE G T Y APE+ T K + DV+S G + E+
Sbjct: 168 DNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 627 KIVYEEIISATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF 685
+IVY + ++DF + +G+G +G V A P+GEI A+KK P +
Sbjct: 4 RIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRT 56
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPK------HSFIIYEYLESGSLDKILCNDASAKELG 739
L EI+ L +H NI+ + P +II E +++ L +++ S + L
Sbjct: 57 LREIKILKHFKHENIITIFNI-QRPDSFENFNEVYIIQELMQT-DLHRVI----STQMLS 110
Query: 740 WTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
I A+ LH + ++HRD+ N+L++ + V DFG+A+ ++ ++
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 800 NWSELAG----------THGYVAPELAYT-LKVTEKCDVYSFGVLALEV 837
+ SE G T Y APE+ T K + DV+S G + E+
Sbjct: 168 DNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 9/214 (4%)
Query: 632 EIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQ 690
+I DF +GKG G V+ A+ + + FA+K + M E + E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKR 70
Query: 691 ALT-EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG 749
L+ H + + ++ F + EYL G L + + S + ++
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAE 127
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ L +LH+ IV+RD+ N+LLD ++DFG+ K + +E GT
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ K D +SFGVL E++ G+ P
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 20/218 (9%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSP--------LPGEMSFQQEEFL 686
AT+ + IG G +G+VY+A+ P SG A+K P LP +S +E L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLP--ISTVREVAL 64
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL---CNDASAKELGWTQR 743
++ L H N+V+ C+ + I L +D+ L + A L
Sbjct: 65 --LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETI 122
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSE 803
++++ L +LH NC IVHRD+ +N+L+ G ++DFG+A+ + + +
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LTP 178
Query: 804 LAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGK 841
+ T Y APE+ D++S G + E+ + K
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 60
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 117
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 118 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 172
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 173 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 120 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 34/229 (14%)
Query: 627 KIVYEEIISATNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF 685
+IVY + ++DF + +G+G +G V A P+GEI A+KK P +
Sbjct: 4 RIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE---PFDKPLFALRT 56
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPK------HSFIIYEYLESGSLDKILCNDASAKELG 739
L EI+ L +H NI+ + P +II E +++ L +++ S + L
Sbjct: 57 LREIKILKHFKHENIITIFNI-QRPDSFENFNEVYIIQELMQT-DLHRVI----STQMLS 110
Query: 740 WTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
I A+ LH + ++HRD+ N+L++ + V DFG+A+ ++ ++
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAA 167
Query: 800 NWSELAG----------THGYVAPELAYT-LKVTEKCDVYSFGVLALEV 837
+ SE G T Y APE+ T K + DV+S G + E+
Sbjct: 168 DNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 135/329 (41%), Gaps = 49/329 (14%)
Query: 594 FFFIFHQRKNDSQTQQSSFGNTPGLRSV--LTFEGKIVY--EEIISATNDFNAEHCIGKG 649
++FH+++N+S+ GN SV F VY +E A +G+G
Sbjct: 4 MLYVFHRKRNNSR-----LGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQG 58
Query: 650 GHGSVYRAKVPSGEI-------FAVKKFHSPLPGEMSFQQE--EFLNEIQALTEIRHRNI 700
G VY V G + A+K + E + +E EFLNE + E ++
Sbjct: 59 SFGMVYEG-VAKGVVKDEPETRVAIKTVN-----EAASMRERIEFLNEASVMKEFNCHHV 112
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAKELGWTQRLNVIKGVADA 753
V+ G S + + +I E + G L L N+ ++ + + +AD
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 172
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH----G 809
+ YL+ N F VHRD++++N ++ + + DFG+ + + +++ G
Sbjct: 173 MAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLPVR 227
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
+++PE T DV+SFGV+ E+ + P L +LD
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC 287
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
P + L +M++ C NP+ RP+
Sbjct: 288 PDM-----LFELMRM---CWQYNPKMRPS 308
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 63/215 (29%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A N +++ GT YV
Sbjct: 119 --YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 62
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW--SELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A ++ +++ GT YV
Sbjct: 120 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 174
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 175 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 685 FLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQR 743
L+E+ L ++ H NI+K Y F ++ +++ E G L D+I+ ++
Sbjct: 51 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDA 106
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSN 800
++K V YLH + IVHRD+ +N+LL+ + DFG++
Sbjct: 107 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGK 162
Query: 801 WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVL 833
E GT Y+APE+ K EKCDV+S GV+
Sbjct: 163 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVI 194
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +G + AVK+ P QQ +F EIQ L + I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD----QQRDFQREIQILKALHSDFI 73
Query: 701 VKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G P ++ EYL SG L L + L ++ L + + YL
Sbjct: 74 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 131
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ VHRD++++N+L++ ++DFG+AK L D + + APE
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 816 AYTLKVTEKCDVYSFGVLALEVI 838
+ + DV+SFGV+ E+
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +G + AVK+ P QQ +F EIQ L + I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD----QQRDFQREIQILKALHSDFI 86
Query: 701 VKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G P ++ EYL SG L L L ++ L + + YL
Sbjct: 87 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ VHRD++++N+L++ ++DFG+AK L D + + APE
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 816 AYTLKVTEKCDVYSFGVLALEVI 838
+ + DV+SFGV+ E+
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 101/221 (45%), Gaps = 28/221 (12%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEE-----FLNE 688
+S+++ F +G G + +VY+ + ++ K E+ EE + E
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALK-------EVKLDSEEGTPSTAIRE 53
Query: 689 IQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR---LN 745
I + E++H NIV+ Y +++E++ D L ++ +G T R LN
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFM-----DNDLKKYMDSRTVGNTPRGLELN 108
Query: 746 VIK----GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
++K + L + H N I+HRD+ +N+L++ + + DFG+A+ + +
Sbjct: 109 LVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165
Query: 802 SELAGTHGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGK 841
S T Y AP+ L + + D++S G + E+I GK
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 34/209 (16%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKF----HSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
IG+G +G V++ + +G+I A+KKF P+ +++ L EI+ L +++H N+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIA------LREIRMLKQLKHPNL 64
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR---LNVIKGVA----DA 753
V + +++EY C+ EL QR +++K + A
Sbjct: 65 VNLLEVFRRKRRLHLVFEY----------CDHTVLHELDRYQRGVPEHLVKSITWQTLQA 114
Query: 754 LFYLH-NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
+ + H +NC +HRD+ +N+L+ + DFG A+ L S + + T Y +
Sbjct: 115 VNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRS 170
Query: 813 PELAY-TLKVTEKCDVYSFGVLALEVIKG 840
PEL + DV++ G + E++ G
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 683 EEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQ 742
E EI + H N+VKFYG ++ EY G L + D E Q
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQ 108
Query: 743 RL--NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDS 798
R ++ GV YLH I HRDI +N+LLD +SDFG+A N
Sbjct: 109 RFFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 799 SNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
+++ GT YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +G + AVK+ P QQ +F EIQ L + I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD----QQRDFQREIQILKALHSDFI 74
Query: 701 VKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
VK+ G P ++ EYL SG L L L ++ L + + YL
Sbjct: 75 VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPEL 815
+ VHRD++++N+L++ ++DFG+AK L D + + APE
Sbjct: 133 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 816 AYTLKVTEKCDVYSFGVLALEVI 838
+ + DV+SFGV+ E+
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 685 FLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQR 743
L+E+ L ++ H NI+K Y F ++ +++ E G L D+I+ ++
Sbjct: 68 LLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILR----QKFSEVDA 123
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSN 800
++K V YLH + IVHRD+ +N+LL+ + DFG++
Sbjct: 124 AVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEV-GGK 179
Query: 801 WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVL 833
E GT Y+APE+ K EKCDV+S GV+
Sbjct: 180 MKERLGTAYYIAPEVLRK-KYDEKCDVWSCGVI 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 32/262 (12%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH--PKHSFIIYE 718
+GE+ AVK + + + + EI L + H +I+K+ G C K ++ E
Sbjct: 42 TGEMVAVKALKADCGPQ---HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
Y+ GSL L +G Q L + + + + YLH+ + +HR+++++NVLLD
Sbjct: 99 YVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHSQHY---IHRNLAARNVLLD 151
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG----YVAPELAYTLKVTEKCDVYSFGVLA 834
+ DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 835 LEVI-----KGKHPRDFL----FEXXXXXXXXXIEMLD--SRLPYPSLHVQKKLMSIMQV 883
E++ P FL E+L+ RLP P K + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD----KCPCEVYHL 266
Query: 884 AFSCLDQNPESRPTMKRVSQLL 905
+C + RPT + + +L
Sbjct: 267 MKNCWETEASFRPTFENLIPIL 288
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 36 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 88
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKEL-GWTQRLNVIKGVAD 752
N++ G C + S ++ Y++ G L + N+ + K+L G+ L V KG+
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMK- 145
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH--- 808
+L + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 146 ---FLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 199
Query: 809 GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 200 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL 692
+ + +F IG+G +G VY+A+ +GE+ A+KK L E + EI L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLL 59
Query: 693 TEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVI 747
E+ H NIVK ++++E+L S+D DASA L + ++
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLL 116
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+G+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 117 QGLA----FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 808 HGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRA-KVPSGEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEI 695
D++ +G+G +G V A + E AVK + + ++E +N++ +
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-----L 61
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADA 753
H N+VKFYG ++ EY G L + D E QR ++ GV
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQRFFHQLMAGVV-- 118
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW--SELAGTHGYV 811
YLH I HRDI +N+LLD +SDFG+A ++ +++ GT YV
Sbjct: 119 --YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYV 173
Query: 812 APELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
APEL + E DV+S G++ ++ G+ P D
Sbjct: 174 APELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Query: 683 EEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQ 742
E EI + H N+VKFYG ++ EY G L + D E Q
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD-AQ 107
Query: 743 RL--NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDS 798
R ++ GV YLH I HRDI +N+LLD +SDFG+A N
Sbjct: 108 RFFHQLMAGVV----YLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 799 SNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRD 845
+++ GT YVAPEL + E DV+S G++ ++ G+ P D
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 39 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 91
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH---G 809
+ +L + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 147 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 204 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 90
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKEL-GWTQRLNVIKGVAD 752
N++ G C + S ++ Y++ G L + N+ + K+L G+ L V KG+
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMK- 147
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH--- 808
+L + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 148 ---FLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 201
Query: 809 GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 202 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL 692
+ + +F IG+G +G VY+A+ +GE+ A+KK L E + EI L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLL 59
Query: 693 TEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVI 747
E+ H NIVK ++++E+L S+D DASA L + ++
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLL 116
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+G+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 117 QGLA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 808 HGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 61/309 (19%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSF-QQEEFLNE--IQALTEIRHRNIVK 702
IG+G +G+VY+ + + AVK F SF ++ F+NE I + + H NI +
Sbjct: 21 IGRGRYGAVYKGSLDERPV-AVKVF--------SFANRQNFINEKNIYRVPLMEHDNIAR 71
Query: 703 FY----GFCSHPKHSFI-IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
F + + ++ + EY +GSL K L S W + V L YL
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYL 127
Query: 758 H------NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA------KFLNP---DSSNWS 802
H ++ P I HRD++S+NVL+ +SDFG++ + + P D++ S
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 803 ELAGTHGYVAPEL---AYTLKVTE----KCDVYSFGVLALEVIKG-----------KHPR 844
E+ GT Y+APE+ A L+ E + D+Y+ G++ E+ ++
Sbjct: 188 EV-GTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246
Query: 845 DFLFEXXXXXXXXXIEMLDSRL----PYPSLHVQKKLM--SIMQVAFSCLDQNPESRPTM 898
F E +++L SR +P + L S+ + C DQ+ E+R T
Sbjct: 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTA 306
Query: 899 KRVSQLLCE 907
+ + + E
Sbjct: 307 QXAEERMAE 315
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 646 IGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G G V+R + +G FA K +P + +E EIQ ++ +RH +V +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----KETVRKEIQTMSVLRHPTLVNLH 220
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
+IYE++ G L + + ++ + ++ + + ++ V L ++H N +
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMHENNY-- 276
Query: 765 IVHRDISSKNVLLDLGY--EAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
VH D+ +N++ E + DFG+ L+P S GT + APE+A V
Sbjct: 277 -VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVAEGKPVG 334
Query: 823 EKCDVYSFGVLALEVIKGKHP 843
D++S GVL+ ++ G P
Sbjct: 335 YYTDMWSVGVLSYILLSGLSP 355
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 40/224 (17%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKF 703
+GKG +G V+++ +GE+ AVKK Q+ EI LTE+ H NIV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT--FREIMILTELSGHENIVNL 74
Query: 704 YGF--CSHPKHSFIIYEYLESGSLDKILCN--DASAKELGWTQRLNVIKGVADALFYLHN 759
+ + +++++Y+E+ I N + K+ Q + VIK YLH+
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIK-------YLHS 127
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--------------FLNPDSSNW---- 801
++HRD+ N+LL+ V+DFG+++ +N ++ N+
Sbjct: 128 GG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 802 ---SELAGTHGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGK 841
++ T Y APE L + K T+ D++S G + E++ GK
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL 692
+ + +F IG+G +G VY+A+ +GE+ A+KK L E + EI L
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLL 58
Query: 693 TEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVI 747
E+ H NIVK ++++E+L S+D DASA L + ++
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLL 115
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+G+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 116 QGLA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 168
Query: 808 HGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Query: 645 CIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IGKG V A+ + +G+ AVK S Q+ E++ + H NIVK
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK--LFREVRIXKVLNHPNIVKL 78
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ K +++ EY G + L KE + + + A+ Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF---RQIVSAVQYCHQKF-- 133
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT- 822
IVHRD+ ++N+LLD ++DFG + + G Y APEL K
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTF-GNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 823 EKCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ G P D
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V+R K +G AVKK + F+ EE + A + IV Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELV----ACAGLSSPRIVPLY 116
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G I E LE GSL +++ E + L + + L YLH
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 170
Query: 765 IVHRDISSKNVLLDL-GYEAHVSDFGIAKFLNPDSSNWSELAG-----THGYVAPELAYT 818
I+H D+ + NVLL G A + DFG A L PD S L G T ++APE+
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
K D++S + L ++ G HP
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 38 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 90
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH---G 809
+ +L + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 146 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 203 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 43 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 95
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADA 753
N++ G C + S ++ Y++ G L + N+ + K+L + VA
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH---G 809
+ +L + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 151 MKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 208 WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 33/215 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLP--------GEMSFQQEEFLNEIQALTEIRH 697
IG+G G VY + + KK H + GE+S +FL E + + H
Sbjct: 97 IGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRITDIGEVS----QFLTEGIIMKDFSH 149
Query: 698 RNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDA---SAKEL-GWTQRLNVIKGVAD 752
N++ G C + S ++ Y++ G L + N+ + K+L G+ L V KG+
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG--LQVAKGMK- 206
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTH--- 808
+L + F VHRD++++N +LD + V+DFG+A+ + + + G
Sbjct: 207 ---FLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 260
Query: 809 GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++A E T K T K DV+SFGVL E++ P
Sbjct: 261 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 640 FNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
++ +G G G V+R + +G FA K +P + +E EIQ ++ +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESD----KETVRKEIQTMSVLRHP 108
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
+V + +IYE++ G L + + ++ + ++ + + ++ V L ++H
Sbjct: 109 TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHN--KMSEDEAVEYMRQVCKGLCHMH 166
Query: 759 NNCFPPIVHRDISSKNVLLDLGY--EAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
N + VH D+ +N++ E + DFG+ L+P S GT + APE+A
Sbjct: 167 ENNY---VHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV-KVTTGTAEFAAPEVA 222
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGKHP 843
V D++S GVL+ ++ G P
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 640 FNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
+N +GKG G V + K + + +AVK + + L E++ L ++ H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA--SAKNKDTSTILREVELLKKLDHP 81
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYL 757
NI+K + +I+ E G L D+I+ K +IK V + Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYM 137
Query: 758 HNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
H + IVHRD+ +N+LL+ + + DFG++ ++ + GT Y+APE
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPE 193
Query: 815 LAYTLKVT--EKCDVYSFGVLALEVIKGKHP 843
+ L+ T EKCDV+S GV+ ++ G P
Sbjct: 194 V---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 67
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 124
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 125 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 55/305 (18%)
Query: 626 GKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKF-HSPLPGEMSFQQEE 684
G+ + +++ AT A H G+ G+ +V AVK + P E+ +
Sbjct: 32 GEGEFGKVVKAT----AFHLKGRAGYTTV-----------AVKMLKENASPSEL----RD 72
Query: 685 FLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL--------------- 729
L+E L ++ H +++K YG CS +I EY + GSL L
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 730 ------CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA 783
+ + L ++ ++ + YL +VHRD++++N+L+ G +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKM 189
Query: 784 HVSDFGIAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-G 840
+SDFG+++ + + S G ++A E + T + DV+SFGVL E++ G
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 841 KHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKR 900
+P + + R+ P + +++ +M C Q P+ RP
Sbjct: 250 GNP----YPGIPPERLFNLLKTGHRMERPD-NCSEEMYRLM---LQCWKQEPDKRPVFAD 301
Query: 901 VSQLL 905
+S+ L
Sbjct: 302 ISKDL 306
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 640 FNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
+N +GKG G V + K + + +AVK + + L E++ L ++ H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKA--SAKNKDTSTILREVELLKKLDHP 81
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYL 757
NI+K + +I+ E G L D+I+ K +IK V + Y+
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYM 137
Query: 758 HNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
H + IVHRD+ +N+LL+ + + DFG++ ++ + GT Y+APE
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPE 193
Query: 815 LAYTLKVT--EKCDVYSFGVLALEVIKGKHP 843
+ L+ T EKCDV+S GV+ ++ G P
Sbjct: 194 V---LRGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 60
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 118 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V+R K +G AVKK + F+ EE + A + IV Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELV----ACAGLSSPRIVPLY 130
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G I E LE GSL +++ E + L + + L YLH
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 184
Query: 765 IVHRDISSKNVLLDL-GYEAHVSDFGIAKFLNPDSSNWSELAG-----THGYVAPELAYT 818
I+H D+ + NVLL G A + DFG A L PD S L G T ++APE+
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
K D++S + L ++ G HP
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 67
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 124
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 125 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 177
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 59
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L S+D DASA L + +++G
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 117 LA----FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 60
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 118 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 22/205 (10%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V+R K +G AVKK + F+ EE + A + IV Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELV----ACAGLSSPRIVPLY 132
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
G I E LE GSL +++ E + L + + L YLH
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPE---DRALYYLGQALEGLEYLHTR---R 186
Query: 765 IVHRDISSKNVLLDL-GYEAHVSDFGIAKFLNPDSSNWSELAG-----THGYVAPELAYT 818
I+H D+ + NVLL G A + DFG A L PD S L G T ++APE+
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
K D++S + L ++ G HP
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 59
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 117 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 59
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 116
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ ++ T
Sbjct: 117 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLW 169
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 59
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 117 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 60
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 118 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL 692
+ + +F IG+G +G VY+A+ +GE+ A+KK L E + EI L
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLL 60
Query: 693 TEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVI 747
E+ H NIVK ++++E+L L K + DASA L + ++
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLL 117
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+G+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 118 QGLA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 170
Query: 808 HGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 32/262 (12%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH--PKHSFIIYE 718
+GE+ AVK + + + + EI L + H +I+K+ G C K ++ E
Sbjct: 42 TGEMVAVKALKADCGPQ---HRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVME 98
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
Y+ GSL L +G Q L + + + + YLH + +HR+++++NVLLD
Sbjct: 99 YVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHAQHY---IHRNLAARNVLLD 151
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG----YVAPELAYTLKVTEKCDVYSFGVLA 834
+ DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 152 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 210
Query: 835 LEVI-----KGKHPRDFL----FEXXXXXXXXXIEMLD--SRLPYPSLHVQKKLMSIMQV 883
E++ P FL E+L+ RLP P K + +
Sbjct: 211 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPD----KCPCEVYHL 266
Query: 884 AFSCLDQNPESRPTMKRVSQLL 905
+C + RPT + + +L
Sbjct: 267 MKNCWETEASFRPTFENLIPIL 288
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 88
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 88
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 64
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 122 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 174
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 55/305 (18%)
Query: 626 GKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKF-HSPLPGEMSFQQEE 684
G+ + +++ AT A H G+ G+ +V AVK + P E+ +
Sbjct: 32 GEGEFGKVVKAT----AFHLKGRAGYTTV-----------AVKMLKENASPSEL----RD 72
Query: 685 FLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL--------------- 729
L+E L ++ H +++K YG CS +I EY + GSL L
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 730 ------CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA 783
+ + L ++ ++ + YL +VHRD++++N+L+ G +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKM 189
Query: 784 HVSDFGIAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-G 840
+SDFG+++ + + S G ++A E + T + DV+SFGVL E++ G
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 841 KHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKR 900
+P + + R+ P + +++ +M C Q P+ RP
Sbjct: 250 GNP----YPGIPPERLFNLLKTGHRMERPD-NCSEEMYRLM---LQCWKQEPDKRPVFAD 301
Query: 901 VSQLL 905
+S+ L
Sbjct: 302 ISKDL 306
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL 692
+ + +F IG+G +G VY+A+ +GE+ A+KK L E + EI L
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLL 59
Query: 693 TEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVI 747
E+ H NIVK ++++E+L L K + DASA L + ++
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLL 116
Query: 748 KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGT 807
+G+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 117 QGLA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVT 169
Query: 808 HGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 88
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 144 N---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 33/213 (15%)
Query: 647 GKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGF 706
+G G V++A++ + AVK F PL + S+Q E EI + ++H N+++F
Sbjct: 24 ARGRFGCVWKAQL-MNDFVAVKIF--PLQDKQSWQSE---REIFSTPGMKHENLLQF--I 75
Query: 707 CSHPKHS------FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ + S ++I + + GSL L + + W + +V + ++ L YLH +
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI----ITWNELCHVAETMSRGLSYLHED 131
Query: 761 ---CF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGY 810
C P I HRD SKNVLL A ++DFG+A P + GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 811 VAPE-----LAYTLKVTEKCDVYSFGVLALEVI 838
+APE + + + D+Y+ G++ E++
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G +G+V++AK + EI A+K+ L + L EI L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL--CNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
K +++E+ + L K CN E+ + ++KG+ + H+
Sbjct: 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLG----FCHSR-- 120
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV- 821
++HRD+ +N+L++ E ++DFG+A+ +S T Y P++ + K+
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
+ D++S G + E+ P
Sbjct: 180 STSIDMWSAGCIFAELANAARP 201
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 646 IGKGGHGSV----YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV 701
+G G GSV YR + ++ A+K G EE + E Q + ++ + IV
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQ---GTEKADTEEMMREAQIMHQLDNPYIV 399
Query: 702 KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC 761
+ G C + ++ E G L K L +E+ + ++ V+ + YL
Sbjct: 400 RLIGVC-QAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 762 FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYT 818
F VHR+++++NVLL + A +SDFG++K L D S ++ + + APE
Sbjct: 457 F---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINF 513
Query: 819 LKVTEKCDVYSFGVLALEVIK-GKHP 843
K + + DV+S+GV E + G+ P
Sbjct: 514 RKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 88
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 142
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 90
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 144
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRT--LREIKILLRFRHENIIGIND 92
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 20/222 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQALT 693
++F +GKG G V A+V +G+++AVK L ++ Q ++ + E + L+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV----LKKDVILQDDDVECTMTEKRILS 78
Query: 694 EIR-HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVAD 752
R H + + + P F + E++ G L + + ++ + +
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEIIS 135
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
AL +LH+ I++RD+ NVLLD ++DFG+ K + + GT Y+A
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIA 192
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKHP-----RDFLFE 849
PE+ + D ++ GVL E++ G P D LFE
Sbjct: 193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE 234
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 127/305 (41%), Gaps = 55/305 (18%)
Query: 626 GKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKF-HSPLPGEMSFQQEE 684
G+ + +++ AT A H G+ G+ +V AVK + P E+ +
Sbjct: 32 GEGEFGKVVKAT----AFHLKGRAGYTTV-----------AVKMLKENASPSEL----RD 72
Query: 685 FLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL--------------- 729
L+E L ++ H +++K YG CS +I EY + GSL L
Sbjct: 73 LLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGG 132
Query: 730 ------CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA 783
+ + L ++ ++ + YL +VHRD++++N+L+ G +
Sbjct: 133 SRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKM 189
Query: 784 HVSDFGIAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-G 840
+SDFG+++ + + S G ++A E + T + DV+SFGVL E++ G
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 841 KHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKR 900
+P + + R+ P + +++ +M C Q P+ RP
Sbjct: 250 GNP----YPGIPPERLFNLLKTGHRMERPD-NCSEEMYRLM---LQCWKQEPDKRPVFAD 301
Query: 901 VSQLL 905
+S+ L
Sbjct: 302 ISKDL 306
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 96
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 150
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 151 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 88
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 142
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 143 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 58
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 115
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 116 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 58
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 115
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 116 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI--IYE 718
+GE+ AVK + + + + EI L + H +I+K+ G C + + + E
Sbjct: 59 TGEMVAVKALKADAGPQ---HRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVME 115
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
Y+ GSL L + +G Q L + + + + YLH + +HRD++++NVLLD
Sbjct: 116 YVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQHY---IHRDLAARNVLLD 168
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPELAYTLKVTEKCDVYSFGVLAL 835
+ DFG+AK + + + APE K DV+SFGV
Sbjct: 169 NDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLY 228
Query: 836 EVI 838
E++
Sbjct: 229 ELL 231
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 108
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 164 N---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 60
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 117
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 118 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 60
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 117
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 118 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 21/203 (10%)
Query: 646 IGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+GKG GSV + +G + AVK+ P QQ +F EIQ L + I
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPD----QQRDFQREIQILKALHSDFI 70
Query: 701 VKFYGFCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL- 757
VK+ G P ++ EYL SG L L + L ++ L + + YL
Sbjct: 71 VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA--RLDASRLLLYSSQICKGMEYLG 128
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG---YVAPE 814
C VHRD++++N+L++ ++DFG+AK L D + APE
Sbjct: 129 SRRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 815 LAYTLKVTEKCDVYSFGVLALEV 837
+ + DV+SFGV+ E+
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 92
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 148 N---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 59
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ + T Y
Sbjct: 117 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 59
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 116
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 117 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 58
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 115
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 116 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 17/210 (8%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 60
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG----VAD 752
H NIVK ++++E+L L K + DASA L +IK +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALT---GIPLPLIKSYLFQLLQ 114
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
L + H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y A
Sbjct: 115 GLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 171
Query: 813 PELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
PE+ K + D++S G + E++ +
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 58
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 115
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 116 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 61
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 118
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 119 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 59
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ + T Y
Sbjct: 117 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 169
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 45/221 (20%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IGKG +G V+ K GE AVK F + E S+ +E EI +RH NI+ F
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTT--EEASWFRE---TEIYQTVLMRHENILGFIA 98
Query: 706 FCSHPKHS----FIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
S ++I +Y E+GSL D + AK + L + L +LH
Sbjct: 99 ADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTE 153
Query: 761 CF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIA-KFLNPDSSNWSEL-----AGTHG 809
F P I HRD+ SKN+L+ ++D G+A KF++ +N ++ GT
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS--DTNEVDIPPNTRVGTKR 211
Query: 810 YVAPEL-----------AYTLKVTEKCDVYSFGVLALEVIK 839
Y+ PE+ +Y + D+YSFG++ EV +
Sbjct: 212 YMPPEVLDESLNRNHFQSYIM-----ADMYSFGLILWEVAR 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 124/298 (41%), Gaps = 58/298 (19%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
+DF +G+G G V +A+ +A+KK + L+E+ L +
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-----HTEEKLSTILSEVXLLASL 59
Query: 696 RHRNIVKFYG-----------FCSHPKHS--FIIYEYLESGSLDKILCNDASAKELGWTQ 742
H+ +V++Y + K S FI EY E+ +L ++ ++ ++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN------- 795
RL + + +AL Y+H+ I+HR++ N+ +D + DFG+AK ++
Sbjct: 120 RL--FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 796 ------PDSS-NWSELAGTHGYVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
P SS N + GT YVA E L T EK D YS G++ E I +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI-------YP 227
Query: 848 FEXXXXXXXXXIEMLDSRLPYP------SLHVQKKLMSIMQVAFSCLDQNPESRPTMK 899
F ++ + +P V+KK++ ++ +D +P RP +
Sbjct: 228 FSTGXERVNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLL------IDHDPNKRPGAR 279
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 86
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 140
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 59
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 60 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 116
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 117 LA----FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 169
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLAFRHENIIGIND 90
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 144
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 687 NEIQALTEIR-HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLN 745
EI AL H NIVK + H+F++ E L G L + + K T+
Sbjct: 54 KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI---KKKKHFSETEASY 110
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWS 802
+++ + A+ ++H+ +VHRD+ +N+L + E + DFG A+ PD+
Sbjct: 111 IMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y APEL E CD++S GV+ ++ G+ P
Sbjct: 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 93
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 147
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 94
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 95 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 148
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 149 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 85
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 86 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 139
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 140 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 92
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 146
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 100/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 60
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L L K + DASA L + +++G
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 117
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 118 LA----FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 170
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 86
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 87 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 140
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 58
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L D + DASA L + +++G
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFM---DASALTGIPLPLIKSYLFQLLQG 115
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 116 LA----FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 168
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLAFRHENIIGIND 90
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 146 N---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 61
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ + T Y
Sbjct: 119 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYR 171
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 640 FNAEHCIGKGGHGSVYRAK----VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
F +GKGG+G V++ + +G+IFA+K + + E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 696 RHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNVIK 748
+H IV Y F + K ++I EYL G L + I D + L
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLA--------- 128
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH 808
++ AL +LH I++RD+ +N++L+ ++DFG+ K D + GT
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTI 185
Query: 809 GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D +S G L +++ G P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 24/215 (11%)
Query: 640 FNAEHCIGKGGHGSVYRAK----VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
F +GKGG+G V++ + +G+IFA+K + + E L E+
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 696 RHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNVIK 748
+H IV Y F + K ++I EYL G L + I D + L
Sbjct: 79 KHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQLEREGIFMEDTACFYLA--------- 128
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH 808
++ AL +LH I++RD+ +N++L+ ++DFG+ K D + GT
Sbjct: 129 EISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTI 185
Query: 809 GYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ D +S G L +++ G P
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V A +G+ A+K + + + S Q EI L +RH +I+K Y
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
++ EY + D I+ D +++ + + + A+ Y H +
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 127
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVTE 823
IVHRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ L
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 824 KCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ + P D
Sbjct: 187 EVDVWSCGVILYVMLCRRLPFD 208
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH--PKHSFIIYE 718
+GE+ AVK ++ + + EI+ L + H +IVK+ G C K ++ E
Sbjct: 36 TGEMVAVKALKEGCGPQL---RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 92
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
Y+ GSL L +G Q L + + + + YLH + +HR ++++NVLLD
Sbjct: 93 YVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 145
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG----YVAPELAYTLKVTEKCDVYSFGVLA 834
+ DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 146 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 204
Query: 835 LEVI 838
E++
Sbjct: 205 YELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 661 SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH--PKHSFIIYE 718
+GE+ AVK ++ + + EI+ L + H +IVK+ G C K ++ E
Sbjct: 37 TGEMVAVKALKEGCGPQL---RSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVME 93
Query: 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778
Y+ GSL L +G Q L + + + + YLH + +HR ++++NVLLD
Sbjct: 94 YVPLGSLRDYLPRHC----VGLAQLLLFAQQICEGMAYLHAQHY---IHRALAARNVLLD 146
Query: 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHG----YVAPELAYTLKVTEKCDVYSFGVLA 834
+ DFG+AK + P+ + + + APE K DV+SFGV
Sbjct: 147 NDRLVKIGDFGLAKAV-PEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTL 205
Query: 835 LEVI 838
E++
Sbjct: 206 YELL 209
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE---TCTRFY 137
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL ++ D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 19/210 (9%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 61
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+++ L K + DASA L + +++G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQG 118
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 119 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVI 838
Y APE+ K + D++S G + E++
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 92
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 146
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + E T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 93
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 94 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 147
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + E T Y APE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V A +G+ A+K + + + S Q EI L +RH +I+K Y
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
++ EY + D I+ D +++ + + + A+ Y H +
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 132
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVTE 823
IVHRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ L
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 824 KCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ + P D
Sbjct: 192 EVDVWSCGVILYVMLCRRLPFD 213
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V A +G+ A+K + + + S Q EI L +RH +I+K Y
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLY 80
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
++ EY + D I+ D +++ + + + A+ Y H +
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 133
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVTE 823
IVHRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ L
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 824 KCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ + P D
Sbjct: 193 EVDVWSCGVILYVMLCRRLPFD 214
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 19/205 (9%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ + SP + Q+ L EI+ L RH NI+
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 92
Query: 706 FCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
P K +I+ + +E+ L K+L + L + + L Y+H+
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMET-DLYKLL----KTQHLSNDHICYFLYQILRGLKYIHS- 146
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAY 817
++HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 818 TLK-VTEKCDVYSFGVLALEVIKGK 841
K T+ D++S G + E++ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 19/213 (8%)
Query: 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +F IG+G +G VY+A+ +GE+ A+KK L E + EI L E
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKE 61
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKG 749
+ H NIVK ++++E+L D DASA L + +++G
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A + H++ ++HRD+ +N+L++ ++DFG+A+ + T
Sbjct: 119 LA----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLW 171
Query: 810 YVAPELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
Y APE+ K + D++S G + E++ +
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 632 EIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQ 690
+I DF +GKG G V+ A+ + + FA+K + M E + E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKR 69
Query: 691 ALT-EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG 749
L+ H + + ++ F + EYL G L + + S + ++
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAE 126
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+ L +LH+ IV+RD+ N+LLD ++DFG+ K + + GT
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD 183
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ K D +SFGVL E++ G+ P
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 11/202 (5%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G G V A +G+ A+K + + + S Q EI L +RH +I+K Y
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAK-SDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP 764
++ EY + D I+ D +++ + + + A+ Y H +
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRH---K 123
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAYTLKVTE 823
IVHRD+ +N+LLD ++DFG++ + D + G+ Y APE ++ L
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 824 KCDVYSFGVLALEVIKGKHPRD 845
+ DV+S GV+ ++ + P D
Sbjct: 183 EVDVWSCGVILYVMLCRRLPFD 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+ K L E + EI L E+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR--LDTETEGVPSTAIREISLLKELN 60
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 118 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 170
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+ K L E + EI L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR--LDTETEGVPSTAIREISLLKELN 59
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E+L L K + DASA L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 117 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEE--FLNEIQALTE 694
NDF+ IG+GG G VY K +G+++A+K + +Q E LNE L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSL 245
Query: 695 IRHRN----IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT-QRLNVIKG 749
+ + + Y F + K SFI+ + + G L L E +I G
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
L ++HN +V+RD+ N+LLD +SD G+A + + S GTHG
Sbjct: 305 ----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHG 355
Query: 810 YVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE L + D +S G + ++++G P
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEE--FLNEIQALTE 694
NDF+ IG+GG G VY K +G+++A+K + +Q E LNE L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK---KRIKMKQGETLALNERIMLSL 245
Query: 695 IRHRN----IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT-QRLNVIKG 749
+ + + Y F + K SFI+ + + G L L E +I G
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
L ++HN +V+RD+ N+LLD +SD G+A + + S GTHG
Sbjct: 305 ----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHG 355
Query: 810 YVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE L + D +S G + ++++G P
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 86/200 (43%), Gaps = 9/200 (4%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IG+G +G V A ++ K SP + Q+ L EI+ L RH NI+
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRT--LREIKILLRFRHENIIGIND 108
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
P + YL + + L + L + + L Y+H+ +
Sbjct: 109 IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---V 165
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPELAYTLK-V 821
+HRD+ N+LL+ + + DFG+A+ +PD + +E T Y APE+ K
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGY 225
Query: 822 TEKCDVYSFGVLALEVIKGK 841
T+ D++S G + E++ +
Sbjct: 226 TKSIDIWSVGCILAEMLSNR 245
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEE--FLNEIQALTE 694
NDF+ IG+GG G VY K +G+++A+K + +Q E LNE L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK---RIKMKQGETLALNERIMLSL 245
Query: 695 IRHRN----IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT-QRLNVIKG 749
+ + + Y F + K SFI+ + + G L L E +I G
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
L ++HN +V+RD+ N+LLD +SD G+A + + S GTHG
Sbjct: 305 ----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHG 355
Query: 810 YVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE L + D +S G + ++++G P
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSG----EIFAVKKFHSPLPGEMSFQQEEFLNEIQALT 693
+ F +G+G G V+ K SG +++A+K + + +I L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LV 81
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV---IKG 749
E+ H IVK Y F + K ++I ++L G L L +KE+ +T+ +V +
Sbjct: 82 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL-----SKEVMFTEE-DVKFYLAE 134
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A AL +LH+ I++RD+ +N+LLD ++DFG++K GT
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 191
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 192 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSG----EIFAVKKFHSPLPGEMSFQQEEFLNEIQALT 693
+ F +G+G G V+ K SG +++A+K + + +I L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LV 82
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV---IKG 749
E+ H IVK Y F + K ++I ++L G L L +KE+ +T+ +V +
Sbjct: 83 EVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL-----SKEVMFTEE-DVKFYLAE 135
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A AL +LH+ I++RD+ +N+LLD ++DFG++K GT
Sbjct: 136 LALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE 192
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ T+ D +SFGVL E++ G P
Sbjct: 193 YMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 22/215 (10%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEE--FLNEIQALTE 694
NDF+ IG+GG G VY K +G+++A+K + +Q E LNE L+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK---RIKMKQGETLALNERIMLSL 244
Query: 695 IRHRN----IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT-QRLNVIKG 749
+ + + Y F + K SFI+ + + G L L E +I G
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
L ++HN +V+RD+ N+LLD +SD G+A + + S GTHG
Sbjct: 304 ----LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHG 354
Query: 810 YVAPE-LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE L + D +S G + ++++G P
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHS-FIIYEYLESGSLDKILCNDASAKELGWTQRLN 745
E ++ + H VK Y FC + Y ++G L K + S E T
Sbjct: 86 RERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRF 141
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSE 803
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 142 YTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANX 198
Query: 804 LAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 199 FVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALT 693
DF +G+G +V A+ + + +A+K K H ++ + E ++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMS 84
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+ H VK Y + + Y ++G L K + S E T + A
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSA 141
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYV 811
L YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + + GT YV
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYV 198
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PEL + D+++ G + +++ G P
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESG-------SLDKILCNDASAK 736
EFLNE + E ++V+ G S + + +I E + G SL + N+
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 179
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 180 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 238
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 239 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 276
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 115
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 116 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 635 SATNDFNAEH-------CIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQE 683
S+T D+ + CIG+G G V++ S E A+K + + +E
Sbjct: 28 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---RE 84
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR 743
+FL E + + H +IVK G + +II E G L L L
Sbjct: 85 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASL 141
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSE 803
+ ++ AL YL + F VHRDI+++NVL+ + DFG+++++ DS+ +
Sbjct: 142 ILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKA 197
Query: 804 LAGTH--GYVAPELAYTLKVTEKCDVYSFGVLALEVI 838
G ++APE + T DV+ FGV E++
Sbjct: 198 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 9/204 (4%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V A + KF S + S EI L +RH +I+K Y
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ P ++ EY D I+ K + + + + A+ Y H + I
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIV----EKKRMTEDEGRRFFQQIICAIEYCHRH---KI 129
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY-TLKVTEK 824
VHRD+ +N+LLD ++DFG++ + D + G+ Y APE+ L +
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVINGKLYAGPE 188
Query: 825 CDVYSFGVLALEVIKGKHPRDFLF 848
DV+S G++ ++ G+ P D F
Sbjct: 189 VDVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 138
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALT 693
DF +G+G +V A+ + + +A+K K H ++ + E ++
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMS 63
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+ H VK Y + + Y ++G L K + S E T + A
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSA 120
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYV 811
L YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + + GT YV
Sbjct: 121 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PEL + D+++ G + +++ G P
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESG-------SLDKILCNDASAK 736
EFLNE + E ++V+ G S + + +I E + G SL + N+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 189
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 190 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 249 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 286
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 140
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 141 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 138
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 99/213 (46%), Gaps = 16/213 (7%)
Query: 637 TNDFNAEHCIGKGGHGSVYRA--KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
T+D+ +GKG V R K P+ E +A K ++ Q+ E E +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQE-YAAKIINTKKLSARDHQKLE--REARICRL 86
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADA 753
++H NIV+ + S +++++ + G L D A+E + I + ++
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGEL----FEDIVAREYYSEADASHCIHQILES 142
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
+ ++H + IVHRD+ +N+LL G ++DFG+A + + W AGT GY
Sbjct: 143 VNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGY 199
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
++PE+ + D+++ GV+ ++ G P
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 114
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 115 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALT 693
DF +G+G +V A+ + + +A+K K H ++ + E ++
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMS 62
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+ H VK Y + + Y ++G L K + S E T + A
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSA 119
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYV 811
L YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + + GT YV
Sbjct: 120 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PEL + D+++ G + +++ G P
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 137
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALT 693
DF +G+G +V A+ + + +A+K K H ++ + E ++
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMS 84
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+ H VK Y + + Y ++G L K + S E T + A
Sbjct: 85 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSA 141
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYV 811
L YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + + GT YV
Sbjct: 142 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PEL + D+++ G + +++ G P
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 137
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 16/212 (7%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVK---KFHSPLPGEMSFQQEEFLNEIQALT 693
DF +G+G +V A+ + + +A+K K H ++ + E ++
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPY----VTRERDVMS 69
Query: 694 EIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
+ H VK Y + + Y ++G L K + S E T + A
Sbjct: 70 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFYTAEIVSA 126
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYV 811
L YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + + GT YV
Sbjct: 127 LEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+PEL + D+++ G + +++ G P
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 137
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 135
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 135
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 137
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 135
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 135
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E ++ + H VK Y + + Y ++G L K + S E T
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE---TCTRFY 137
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSEL 804
+ AL YLH I+HRD+ +N+LL+ ++DFG AK L+P+S + +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT YV+PEL + D+++ G + +++ G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 18/206 (8%)
Query: 645 CIGKGGHGSVYRAKVPSG----EIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+G+G G V+ K SG +++A+K + + +I L E+ H I
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI--LVEVNHPFI 88
Query: 701 VKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR--LNVIKGVADALFYL 757
VK Y F + K ++I ++L G L L +KE+ +T+ + +A AL +L
Sbjct: 89 VKLHYAFQTEGK-LYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALALDHL 142
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
H+ I++RD+ +N+LLD ++DFG++K GT Y+APE+
Sbjct: 143 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHP 843
T+ D +SFGVL E++ G P
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 98/202 (48%), Gaps = 14/202 (6%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG+G +G+V++AK + EI A+K+ L + L EI L E++H+NIV+ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVR--LDDDDEGVPSSALREICLLKELKHKNIVRLH 67
Query: 705 GFCSHPKHSFIIYEYLESGSLDKIL--CNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
K +++E+ + L K CN E+ + ++KG+ + H+
Sbjct: 68 DVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLG----FCHSR-- 120
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV- 821
++HRD+ +N+L++ E +++FG+A+ +S T Y P++ + K+
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 822 TEKCDVYSFGVLALEVIKGKHP 843
+ D++S G + E+ P
Sbjct: 180 STSIDMWSAGCIFAELANAGRP 201
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 640 FNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
F E +G+G VYR K + + +A+K + ++ EI L + H
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKK------TVDKKIVRTEIGVLLRLSHP 108
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGW-TQR--LNVIKGVADAL 754
NI+K P ++ E + G L D+I+ E G+ ++R + +K + +A+
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIV-------EKGYYSERDAADAVKQILEAV 161
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
YLH N IVHRD+ +N+L ++DFG++K + + GT GY
Sbjct: 162 AYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYC 217
Query: 812 APELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
APE+ + D++S G++ ++ G P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 8 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 124
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ + YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 125 EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 237
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 238 PPICT----IDVYMIMVKCWMIDADSRPKFREL 266
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIA 128
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 241
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 242 PPICT----IDVYMIMVKCWMIDADSRPKFREL 270
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 635 SATNDFNAEH-------CIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQE 683
S+T D+ + CIG+G G V++ S E A+K + + +E
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---RE 61
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR 743
+FL E + + H +IVK G + +II E G L L L
Sbjct: 62 KFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASL 118
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSE 803
+ ++ AL YL + F VHRDI+++NVL+ + DFG+++++ DS+ +
Sbjct: 119 ILYAYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKA 174
Query: 804 LAGTH--GYVAPELAYTLKVTEKCDVYSFGVLALEVI 838
G ++APE + T DV+ FGV E++
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+F IG+G +G VY+A+ +GE+ A+KK L E + EI L E+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR--LDTETEGVPSTAIREISLLKELN 59
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKE-----LGWTQRLNVIKGVA 751
H NIVK ++++E++ D DASA L + +++G+A
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHVHQ---DLKTFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
+ H++ ++HRD+ +N+L++ ++DFG+A+ ++ T Y
Sbjct: 117 ----FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 169
Query: 812 APELAYTLK-VTEKCDVYSFGVLALEVIKGK 841
APE+ K + D++S G + E++ +
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 679 SFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCND----- 732
S ++E ++E++ +T++ H NIV G C+ ++I+EY G L L +
Sbjct: 89 SSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFS 148
Query: 733 ------ASAKELGWTQRLNVIK---------GVADALFYLHNNCFPPIVHRDISSKNVLL 777
+ K L + LNV+ VA + +L F VHRD++++NVL+
Sbjct: 149 EDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLV 205
Query: 778 DLGYEAHVSDFGIAKFLNPDSSNWSELAGTH---GYVAPELAYTLKVTEKCDVYSFGVLA 834
G + DFG+A+ + D SN+ ++APE + T K DV+S+G+L
Sbjct: 206 THGKVVKICDFGLARDIMSD-SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
Query: 835 LEV 837
E+
Sbjct: 265 WEI 267
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKKFHSPLPGEMSFQQEE--FLNEIQALTE 694
DF IG+G G V K+ + E I+A+K + EM + E F E L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK---WEMLKRAETACFREERDVLVN 130
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCN--DASAKELGWTQRLNVIKGVAD 752
+ I + H +++ +Y G L +L D +++ ++ + D
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-D 189
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-GTHGYV 811
++ LH VHRDI NVLLD+ ++DFG +N D + S +A GT Y+
Sbjct: 190 SIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 243
Query: 812 APELAYTL-----KVTEKCDVYSFGVLALEVIKGKHP 843
+PE+ + K +CD +S GV E++ G+ P
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 129
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 242
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 243 PPICT----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 21/217 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKKFHSPLPGEMSFQQEE--FLNEIQALTE 694
DF IG+G G V K+ + E I+A+K + EM + E F E L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK---WEMLKRAETACFREERDVLVN 146
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCN--DASAKELGWTQRLNVIKGVAD 752
+ I + H +++ +Y G L +L D +++ ++ + D
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI-D 205
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-GTHGYV 811
++ LH VHRDI NVLLD+ ++DFG +N D + S +A GT Y+
Sbjct: 206 SIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYI 259
Query: 812 APELAYTL-----KVTEKCDVYSFGVLALEVIKGKHP 843
+PE+ + K +CD +S GV E++ G+ P
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 128
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 241
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 242 PPICT----IDVYMIMVKCWMIDADSRPKFREL 270
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 131
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 244
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 245 PPICT----IDVYMIMVKCWMIDADSRPKFREL 273
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+GKG V R KV +G+ +A ++ Q+ E E + ++H NIV+ +
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE--REARICRLLKHPNIVRLH 76
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKEL-GWTQRLNVIKGVADALFYLHNNCFP 763
S H ++I++ + G L D A+E + I+ + +A+ + H
Sbjct: 77 DSISEEGHHYLIFDLVTGGEL----FEDIVAREYYSEADASHCIQQILEAVLHCHQM--- 129
Query: 764 PIVHRDISSKNVLLD---LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
+VHR++ +N+LL G ++DFG+A + + W AGT GY++PE+
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 189
Query: 821 VTEKCDVYSFGVLALEVIKGKHP 843
+ D+++ GV+ ++ G P
Sbjct: 190 YGKPVDLWACGVILYILLVGYPP 212
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 130
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 243
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 244 PPICT----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 683 EEFLNEIQALTEIRHRNIVKFYGFCSHP--KHSFIIYEYLESGSLDKILCNDASAKELGW 740
E+ EI L ++ H N+VK P H ++++E + G + ++ +++
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQAR 140
Query: 741 TQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN 800
++IKG+ YLH + I+HRDI N+L+ ++DFG++ +
Sbjct: 141 FYFQDLIKGIE----YLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 801 WSELAGTHGYVAPE-LAYTLKV--TEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXX 857
S GT ++APE L+ T K+ + DV++ GV + G+ P F+ E
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP--FMDE-------- 243
Query: 858 XIEMLDSRLPYPSLHVQKK---LMSIMQVAFSCLDQNPESR 895
I L S++ +L + + + LD+NPESR
Sbjct: 244 RIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESR 284
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 127
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 240
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 241 PPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 72
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 72
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES 129
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 110/279 (39%), Gaps = 31/279 (11%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGE-------IFAVKKFHSPLPGEMSFQQEEF 685
I +F +G G G+VY+ +P GE I +++ SP +E
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPK------ANKEI 98
Query: 686 LNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLN 745
L+E + + + ++ + G C I LD + +G LN
Sbjct: 99 LDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLN 155
Query: 746 VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA 805
+A + YL + +VHRD++++NVL+ ++DFG+AK L + +
Sbjct: 156 WCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
Query: 806 GTH--GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEML 862
G ++A E T + DV+S+GV E++ G P D + E
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-- 270
Query: 863 DSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
RLP P + + + + C + +SRP + +
Sbjct: 271 --RLPQPPICT----IDVYMIMVKCWMIDADSRPKFREL 303
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 27/227 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
Query: 797 DSSNWSELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEX 850
G G +++PE T DV+SFGV+ E+ + P L
Sbjct: 185 TDXX---RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 851 XXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 242 QVLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 280
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 72
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 185
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 248
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 249 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 100/239 (41%), Gaps = 27/239 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 59 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 118
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 119 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
Query: 797 DSSNWSELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEX 850
G G +++PE T DV+SFGV+ E+ + P L
Sbjct: 176 TD---XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 232
Query: 851 XXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
+LD P + L+ +M++ C NP+ RP+ + + E++
Sbjct: 233 QVLRFVMEGGLLDKPDNCPDM-----LLELMRM---CWQYNPKMRPSFLEIISSIKEEM 283
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFG 189
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 190 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 239
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 69
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 70 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES 126
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 127 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 182
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 183 FRRFTSASDVWMFGVCMWEIL 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 107/265 (40%), Gaps = 31/265 (11%)
Query: 646 IGKGGHGSVYRA-KVPSGE-------IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH 697
+G G G+VY+ +P GE I +++ SP +E L+E + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPK------ANKEILDEAYVMAGVGS 78
Query: 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYL 757
+ + G C + LD + N LG LN +A + YL
Sbjct: 79 PYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRG---RLGSQDLLNWCMQIAKGMSYL 135
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPEL 815
+ +VHRD++++NVL+ ++DFG+A+ L+ D + + G ++A E
Sbjct: 136 EDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 816 AYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQ 874
+ T + DV+S+GV E++ G P D + E RLP P +
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE----RLPQPPICT- 247
Query: 875 KKLMSIMQVAFSCLDQNPESRPTMK 899
+ + + C + E RP +
Sbjct: 248 ---IDVYMIMVKCWMIDSECRPRFR 269
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYV---REHKDNIGSQYLLNWCVQIA 127
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 240
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 241 PPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 191
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 192 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 241
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
+ + EY+ G L + KE Q + ++ LF+LH I++RD+
Sbjct: 96 YFVMEYVNGGDLMYHIQQVGKFKE---PQAVFYAAEISIGLFFLHKRG---IIYRDLKLD 149
Query: 774 NVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVL 833
NV+LD ++DFG+ K D E GT Y+APE+ + D +++GVL
Sbjct: 150 NVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL 209
Query: 834 ALEVIKGKHPRD 845
E++ G+ P D
Sbjct: 210 LYEMLAGQPPFD 221
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFH-SPLPGEMSFQQ------------EE 684
ND+ + +G + + + +A+KK+ S L + F + ++
Sbjct: 31 NDYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89
Query: 685 FLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDK----ILCNDASAKELGW 740
F NE+Q +T+I++ + G ++ +IIYEY+E+ S+ K D +
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 741 TQRLN-VIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
Q + +IK V ++ Y+HN I HRD+ N+L+D +SDFG ++++
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 800 NWSELAGTHGYVAPEL-----AYTLKVTEKCDVYSFGV 832
S GT+ ++ PE +Y K D++S G+
Sbjct: 208 KGSR--GTYEFMPPEFFSNESSYN---GAKVDIWSLGI 240
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+EE E+ L EIRH NI+ + + +I E + G L L S E T
Sbjct: 73 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 132
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
Q +K + D + YLH+ I H D+ +N+ LLD + DFGIA +
Sbjct: 133 Q---FLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 185
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 130
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 243
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 244 PPICT----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 182
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 183 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 242 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 279
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+EE E+ L EIRH NI+ + + +I E + G L L S E T
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
Q +K + D + YLH+ I H D+ +N+ LLD + DFGIA +
Sbjct: 119 Q---FLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 171
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGW 740
+E+F++E + + H +IVK G + ++II E G L L N S K L
Sbjct: 53 KEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL-- 109
Query: 741 TQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL-NPDS 798
T L ++ + A+ YL + NC VHRDI+ +N+L+ + DFG+++++ + D
Sbjct: 110 TLVLYSLQ-ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 164
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXX 857
S +++PE + T DV+ F V E++ GK P F
Sbjct: 165 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP---FFWLENKDVIG 221
Query: 858 XIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLC 906
+E D RLP P L L ++M C D +P RP R ++L+C
Sbjct: 222 VLEKGD-RLPKPDL-CPPVLYTLMT---RCWDYDPSDRP---RFTELVC 262
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + ++Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGW 740
+E+F++E + + H +IVK G + ++II E G L L N S K L
Sbjct: 57 KEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL-- 113
Query: 741 TQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL-NPDS 798
T L ++ + A+ YL + NC VHRDI+ +N+L+ + DFG+++++ + D
Sbjct: 114 TLVLYSLQ-ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 168
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXX 857
S +++PE + T DV+ F V E++ GK P F
Sbjct: 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP---FFWLENKDVIG 225
Query: 858 XIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLC 906
+E D RLP P L L ++M C D +P RP R ++L+C
Sbjct: 226 VLEKGD-RLPKPDL-CPPVLYTLMT---RCWDYDPSDRP---RFTELVC 266
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N + G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 129
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 242
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 243 PPICT----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 134
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 247
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 248 PPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 124/292 (42%), Gaps = 49/292 (16%)
Query: 642 AEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNI 700
+E +G G G+V G AVK+ + F + EI+ LTE H N+
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALM-EIKLLTESDDHPNV 71
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSL---DKILCNDASAKELGWTQRLN---VIKGVADAL 754
+++Y CS F+ Y LE +L D + + S + L + N +++ +A +
Sbjct: 72 IRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLG--YEAH-----------VSDFGIAKFLNPDSS-- 799
+LH+ I+HRD+ +N+L+ + A +SDFG+ K L+ S
Sbjct: 129 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF 185
Query: 800 --NWSELAGTHGYVAPE-------LAYTLKVTEKCDVYSFGVLALEVI-KGKHPRDFLFE 849
N + +GT G+ APE L ++T D++S G + ++ KGKHP F
Sbjct: 186 RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP----FG 241
Query: 850 XXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
I + S LH + + + +D +P RPT +V
Sbjct: 242 DKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+EE E+ L EIRH NI+ + + +I E + G L L S E T
Sbjct: 52 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 111
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
Q +K + D + YLH+ I H D+ +N+ LLD + DFGIA +
Sbjct: 112 Q---FLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA- 164
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 127
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 240
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 241 PPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 74
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 75 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES 131
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 132 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 187
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 188 FRRFTSASDVWMFGVCMWEIL 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 194
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 195 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 244
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 130
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 243
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 244 PPICT----IDVYMIMVKCWMIDADSRPKFREL 272
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 121
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 234
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 235 PPICT----IDVYMIMVKCWMIDADSRPKFREL 263
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 23/229 (10%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL-CNDASAKELGW 740
+E+F++E + + H +IVK G + ++II E G L L N S K L
Sbjct: 69 KEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVL-- 125
Query: 741 TQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL-NPDS 798
T L ++ + A+ YL + NC VHRDI+ +N+L+ + DFG+++++ + D
Sbjct: 126 TLVLYSLQ-ICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY 180
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXX 857
S +++PE + T DV+ F V E++ GK P F
Sbjct: 181 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP---FFWLENKDVIG 237
Query: 858 XIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLC 906
+E D RLP P L L ++M C D +P RP R ++L+C
Sbjct: 238 VLEKGD-RLPKPDL-CPPVLYTLMT---RCWDYDPSDRP---RFTELVC 278
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 95
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 152
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 265
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 266 PPICT----IDVYMIMVKCWMIDADSRPKFREL 294
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 124
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 125 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 180
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 181 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 239
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 240 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 277
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 127
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 128 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 183
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 184 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 242
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 243 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 280
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 75
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 76 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLES 132
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 133 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 188
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 189 FRRFTSASDVWMFGVCMWEIL 209
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 133
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 246
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 247 PPICT----IDVYMIMVKCWMIDADSRPKFREL 275
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 126
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 127 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 182
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 183 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 241
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 242 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 279
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 34/221 (15%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
IGKG G VY + GE+ A++ E Q + F E+ A + RH N+V F G
Sbjct: 41 IGKGRFGQVYHGRW-HGEV-AIRLIDIERDNED--QLKAFKREVMAYRQTRHENVVLFMG 96
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADALFYLHNNCFP 763
C P H II + +L ++ + ++ T+++ ++KG+ YLH
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMG----YLHAKG-- 150
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFG---IAKFLNPDSSNWSELAGTHGY---VAPELAY 817
I+H+D+ SKNV D G + ++DFG I+ L +L +G+ +APE+
Sbjct: 151 -ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRRE-DKLRIQNGWLCHLAPEIIR 207
Query: 818 TLK---------VTEKCDVYSFGVLALEVIKGKHPRDFLFE 849
L ++ DV++ G + E+ H R++ F+
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYEL----HAREWPFK 244
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 127
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + I RLP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI----PASEISSILEKGERLPQ 240
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 241 PPICT----IDVYMIMRKCWMIDADSRPKFREL 269
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 25/226 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 189
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 190 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 248
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+LD P + L +M++ C NP+ RP+
Sbjct: 249 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPS 286
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 642 AEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNI 700
+E +G G G+V G AVK+ + F + EI+ LTE H N+
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALM-EIKLLTESDDHPNV 89
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSL---DKILCNDASAKELGWTQRLN---VIKGVADAL 754
+++Y CS F+ Y LE +L D + + S + L + N +++ +A +
Sbjct: 90 IRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 755 FYLHNNCFPPIVHRDISSKNVLL--------DLGYEAH-----VSDFGIAKFLNPDS--- 798
+LH+ I+HRD+ +N+L+ D A +SDFG+ K L+
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 799 -SNWSELAGTHGYVAPEL---AYTLKVTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXX 853
N + +GT G+ APEL + ++T D++S G + ++ KGKHP F
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP----FGDKYS 259
Query: 854 XXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
I + S LH + + + +D +P RPT +V
Sbjct: 260 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 34/235 (14%)
Query: 620 SVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMS 679
VL +GK + I+ TN IG G G V++AK+ + A+KK
Sbjct: 26 KVLASDGKTGEQREIAYTNC----KVIGNGSFGVVFQAKLVESDEVAIKKV--------- 72
Query: 680 FQQEEFLN-EIQALTEIRHRNIVK----FYGFCSHPKHSFI--IYEYLESGSLDKILCND 732
Q + F N E+Q + ++H N+V FY F+ + EY+ + +
Sbjct: 73 LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP----ETVYRAS 128
Query: 733 ASAKELGWTQRLNVIK----GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSD 787
+L T + +IK + +L Y+H+ I HRDI +N+LLD + D
Sbjct: 129 RHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLID 185
Query: 788 FGIAKFLNPDSSNWSELAGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
FG AK L N S + + Y APEL + T D++S G + E+++G+
Sbjct: 186 FGSAKILIAGEPNVSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQALT 693
N+F +GKG G V K +G +A+K L E+ ++E L E + L
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNV 746
RH + Y F +H + F++ EY G L +++ D A+ G
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYGAE----- 116
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ AL YLH+ +V+RD+ +N++LD ++DFG+ K D + G
Sbjct: 117 ---IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG 171
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 19/264 (7%)
Query: 306 LRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSI 365
L L +N + ++TF +L + LS N + + P L+ L++ N ++ ++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT-TV 98
Query: 366 PLEIGESL-QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSG-NKLSGCIPRELGSLINL 423
P + E L +L+ L L +N I + L RL L +L L+NL
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 424 EYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483
YL+L NL + +P +L +LV+L L LS N+L P L L +L L H +
Sbjct: 159 RYLNLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 216
Query: 484 KISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNK-------------LE 530
+ ++SLE+LNLS+NNL L F +H L + +++N L+
Sbjct: 217 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLK 276
Query: 531 GQIPNSTTFRDAPLEALQGNKGLY 554
+P++TT A A G KG Y
Sbjct: 277 ETVPSNTTC-CARCHAPAGLKGRY 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 105/272 (38%), Gaps = 35/272 (12%)
Query: 236 LCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPK 295
+C + +P SI N R+L L N + I R
Sbjct: 20 ICTRRELAEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVG 77
Query: 296 SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355
+F L L L L N LT ++ F L + L NN P S+
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN-------------PIESIPS 124
Query: 356 VSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGC--- 412
+ N + L++GE +L+Y+ S G L N+ YLN L C
Sbjct: 125 YAFNRVPSLRRLDLGELKRLEYI--SEAAFEG-----LVNLRYLN--------LGMCNLK 169
Query: 413 -IPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHL 471
IP L +L+ LE L+LS N L P S L L L L H +++ D+L L
Sbjct: 170 DIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSL 228
Query: 472 SELDLSHNFLGEKISSRICRMESLEKLNLSYN 503
EL+LSHN L + LE+++L++N
Sbjct: 229 EELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 113 YLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSG-IGLLTHLTVLHISRNWLSG 171
YL+L N + I +L +LE L S N L +I G L L L + N L+
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKN-LVRKIEVGAFNGLPSLNTLELFDNRLTT 97
Query: 172 SIPHEVGQLTVLNQLALDSNFLNGSIPR------------SLGNLTHVVILYLYNNSFFG 219
L+ L +L L +N + SIP LG L + Y+ +F G
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLE--YISEAAFEG 154
Query: 220 SIP-----------QEIGNLKSLF---DLELCINQLSGAIPLSISNLTNLRFLFLYHNEL 265
+ ++I NL +L +LEL N+L P S LT+LR L+L H ++
Sbjct: 155 LVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
Query: 266 SGI 268
+ I
Sbjct: 215 ATI 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 130
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 243
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 244 PPICT----IDVYMIMRKCWMIDADSRPKFREL 272
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 452
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 453 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 510 KRF---VHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 25/238 (10%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N ++ + + DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 176
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 177 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
+LD P + L +M++ C NP+ RP+ + + E++
Sbjct: 236 VLRFVMEGGLLDKPDNCPDM-----LFELMRM---CWQYNPKMRPSFLEIISSIKEEM 285
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 45/288 (15%)
Query: 642 AEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNI 700
+E +G G G+V G AVK+ + F + EI+ LTE H N+
Sbjct: 37 SEKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALM-EIKLLTESDDHPNV 89
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSL---DKILCNDASAKELGWTQRLN---VIKGVADAL 754
+++Y CS F+ Y LE +L D + + S + L + N +++ +A +
Sbjct: 90 IRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 755 FYLHNNCFPPIVHRDISSKNVLL--------DLGYEAH-----VSDFGIAKFLNPDS--- 798
+LH+ I+HRD+ +N+L+ D A +SDFG+ K L+
Sbjct: 147 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 203
Query: 799 -SNWSELAGTHGYVAPEL---AYTLKVTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXX 853
N + +GT G+ APEL + ++T D++S G + ++ KGKHP F
Sbjct: 204 RXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP----FGDKYS 259
Query: 854 XXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
I + S LH + + + +D +P RPT +V
Sbjct: 260 RESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 307
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 129
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 242
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 243 PPICT----IDVYMIMVKCWMIDADSRPKFREL 271
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 72
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 73 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 129
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ G ++APE
Sbjct: 130 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWMAPESIN 185
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 131
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 244
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 245 PPICT----IDVYMIMVKCWMIDADSRPKFREL 273
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 687 NEIQALTEIRHRNIVKFYG--FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL 744
EIQ L +RH+N+++ + + +++ EY G + + + K Q
Sbjct: 55 KEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRFPVCQAH 112
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP----DSSN 800
+ D L YLH+ IVH+DI N+LL G +S G+A+ L+P D+
Sbjct: 113 GYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 801 WSELAGTHGYVAPELAYTLKVTE--KCDVYSFGVLALEVIKGKHP 843
S+ G+ + PE+A L K D++S GV + G +P
Sbjct: 170 TSQ--GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQALT 693
N+F +GKG G V K +G +A+K L E+ ++E L E + L
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNV 746
RH + Y F +H + F++ EY G L +++ D A+ G
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYGAE----- 117
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ AL YLH+ +V+RD+ +N++LD ++DFG+ K D + G
Sbjct: 118 ---IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG 172
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 137
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 250
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 251 PPICT----IDVYMIMRKCWMIDADSRPKFREL 279
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQALT 693
N+F +GKG G V K +G +A+K L E+ ++E L E + L
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNV 746
RH + Y F +H + F++ EY G L +++ D A+ G
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYGAE----- 118
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ AL YLH+ +V+RD+ +N++LD ++DFG+ K D + G
Sbjct: 119 ---IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCG 173
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQALT 693
N+F +GKG G V K +G +A+K L E+ ++E L E + L
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNV 746
RH + Y F +H + F++ EY G L +++ D A+ G
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYG------- 254
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ AL YLH+ +V+RD+ +N++LD ++DFG+ K D + G
Sbjct: 255 -AEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 311
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 644 HCIGKGGHGSVYRAKVPSGE----IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
CIG+G G V++ S E A+K + + +E+FL E + + H +
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSV---REKFLQEALTMRQFDHPH 452
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
IVK G + +II E G L L L + ++ AL YL +
Sbjct: 453 IVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLES 509
Query: 760 NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--GYVAPELAY 817
F VHRDI+++NVL+ + DFG+++++ DS+ + G ++APE
Sbjct: 510 KRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWMAPESIN 565
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ T DV+ FGV E++
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF---LNEIQALT 693
N+F +GKG G V K +G +A+K L E+ ++E L E + L
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 694 EIRHRNIVKF-YGFCSHPKHSFIIYEYLESGSL------DKILCNDASAKELGWTQRLNV 746
RH + Y F +H + F++ EY G L +++ D A+ G
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRERVFSED-RARFYG------- 257
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ AL YLH+ +V+RD+ +N++LD ++DFG+ K D + G
Sbjct: 258 -AEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 314
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y+APE+ D + GV+ E++ G+ P
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 53/238 (22%), Positives = 101/238 (42%), Gaps = 25/238 (10%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + E ++V+ G S + + +I E + G L L N+
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 120
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
++ + + +AD + YL+ N F VHRD++++N + + + DFG+ + +
Sbjct: 121 PPSLSKMIQMAGEIADGMAYLNANKF---VHRDLAARNCXVAEDFTVKIGDFGMTRDIY- 176
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G +++PE T DV+SFGV+ E+ + P L
Sbjct: 177 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
+LD P + L+ +M++ C NP+ RP+ + + E++
Sbjct: 236 VLRFVMEGGLLDKPDNCPDM-----LLELMRM---CWQYNPKMRPSFLEIISSIKEEM 285
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+ IGKG G V+R K GE AVK F S E S+ +E EI +RH NI+
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREA---EIYQTVMLRHENILG 100
Query: 703 FYGFCSHPKHSF----IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
F + ++ ++ +Y E GSL L N + G + + A L +LH
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEG---MIKLALSTASGLAHLH 156
Query: 759 NNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-----GTH 808
P I HRD+ SKN+L+ ++D G+A + +++ ++A GT
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 215
Query: 809 GYVAPEL---AYTLKVTE---KCDVYSFGVLALEVIK 839
Y+APE+ + +K E + D+Y+ G++ E+ +
Sbjct: 216 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 252
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 19/264 (7%)
Query: 306 LRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSI 365
L L +N + ++TF +L + LS N + + P L+ L++ N ++ ++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT-TV 98
Query: 366 PLEIGESL-QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSG-NKLSGCIPRELGSLINL 423
P + E L +L+ L L +N I + L RL L +L L+NL
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 424 EYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483
YL+L NL + +P +L +LV+L L LS N+L P L L +L L H +
Sbjct: 159 RYLNLGMCNLKD-IP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVAT 216
Query: 484 KISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNK-------------LE 530
+ ++SLE+LNLS+NNL L F +H L + +++N L+
Sbjct: 217 IERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHCNCDVLWLSWWLK 276
Query: 531 GQIPNSTTFRDAPLEALQGNKGLY 554
+P++TT A A G KG Y
Sbjct: 277 ETVPSNTTC-CARCHAPAGLKGRY 299
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 105/272 (38%), Gaps = 35/272 (12%)
Query: 236 LCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPK 295
+C + +P SI N R+L L N + I R
Sbjct: 20 ICTRRELAEVPASIP--VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVG 77
Query: 296 SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355
+F L L L L N LT ++ F L + L NN P S+
Sbjct: 78 AFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNN-------------PIESIPS 124
Query: 356 VSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGC--- 412
+ N + L++GE +L+Y+ S G L N+ YLN L C
Sbjct: 125 YAFNRVPSLRRLDLGELKRLEYI--SEAAFEG-----LVNLRYLN--------LGMCNLK 169
Query: 413 -IPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHL 471
IP L +L+ LE L+LS N L P S L L L L H +++ D+L L
Sbjct: 170 DIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSL 228
Query: 472 SELDLSHNFLGEKISSRICRMESLEKLNLSYN 503
EL+LSHN L + LE+++L++N
Sbjct: 229 EELNLSHNNLMSLPHDLFTPLHRLERVHLNHN 260
Score = 29.6 bits (65), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 113 YLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSG-IGLLTHLTVLHISRNWLSG 171
YL+L N + I +L +LE L S N L +I G L L L + N L+
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKN-LVRKIEVGAFNGLPSLNTLELFDNRLTT 97
Query: 172 SIPHEVGQLTVLNQLALDSNFLNGSIPR------------SLGNLTHVVILYLYNNSFFG 219
L+ L +L L +N + SIP LG L + Y+ +F G
Sbjct: 98 VPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKR--LEYISEAAFEG 154
Query: 220 SIP-----------QEIGNLKSLF---DLELCINQLSGAIPLSISNLTNLRFLFLYHNEL 265
+ ++I NL +L +LEL N+L P S LT+LR L+L H ++
Sbjct: 155 LVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQV 214
Query: 266 SGI 268
+ I
Sbjct: 215 ATI 217
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----------CND 732
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L C +
Sbjct: 64 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 733 AS---AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
S ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 180
Query: 790 IAKFLNPDSSNWSELAGTH--GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDF 846
+A+ ++ G ++APE + T + DV+SFGVL E+ G P
Sbjct: 181 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP--- 237
Query: 847 LFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+ + R+ PS + +L +M+ C P RPT K++ + L
Sbjct: 238 -YPGVPVEELFKLLKEGHRMDKPS-NCTNELYMMMR---DCWHAVPSQRPTFKQLVEDL 291
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+ IGKG G V+R K GE AVK F S E S+ +E EI +RH NI+
Sbjct: 34 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREA---EIYQTVMLRHENILG 87
Query: 703 FYGFCSHPKHSF----IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
F + ++ ++ +Y E GSL L N + G + + A L +LH
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEG---MIKLALSTASGLAHLH 143
Query: 759 NNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-----GTH 808
P I HRD+ SKN+L+ ++D G+A + +++ ++A GT
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 202
Query: 809 GYVAPEL---AYTLKVTE---KCDVYSFGVLALEVIK 839
Y+APE+ + +K E + D+Y+ G++ E+ +
Sbjct: 203 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 239
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 15/213 (7%)
Query: 632 EIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEF----L 686
++ S + +G+G +VY+A+ + +I A+KK G S ++ L
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKL---GHRSEAKDGINRTAL 60
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
EI+ L E+ H NI+ H + ++++++E+ L+ I+ +++ + +
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYML 119
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+ L YLH + I+HRD+ N+LLD ++DFG+AK + +
Sbjct: 120 M--TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 807 THGYVAPELAYTLKVTE-KCDVYSFGVLALEVI 838
T Y APEL + ++ D+++ G + E++
Sbjct: 175 TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 36/211 (17%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV--- 701
+G G +GSV A SGE A+KK P E+ F + + E+ L ++H N++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAY-RELLLLKHMQHENVIGLL 107
Query: 702 ----------KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
FY F +++ ++++ L KI+ + S +++ + ++ +
Sbjct: 108 DVFTPASSLRNFYDF-------YLVMPFMQT-DLQKIMGMEFSEEKIQY-----LVYQML 154
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
L Y+H+ +VHRD+ N+ ++ E + DFG+A+ + + + + T Y
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYR 208
Query: 812 APELAYT-LKVTEKCDVYSFGVLALEVIKGK 841
APE+ + + + D++S G + E++ GK
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 129
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 242
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 243 PPICT----IDVYMIMRKCWMIDADSRPKFREL 271
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 108/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F + G G+VY+ +P GE + L S + +E L+E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I+ LD + +G LN +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 134
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 247
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 248 PPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 127
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 240
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 241 PPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 134
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 247
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 248 PPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 49/292 (16%)
Query: 642 AEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNI 700
+E +G G G+V G AVK+ + F + EI+ LTE H N+
Sbjct: 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRML------IDFCDIALM-EIKLLTESDDHPNV 71
Query: 701 VKFYGFCSHPKHSFIIYEYLESGSL---DKILCNDASAKELGWTQRLN---VIKGVADAL 754
+++Y CS F+ Y LE +L D + + S + L + N +++ +A +
Sbjct: 72 IRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLG--YEAH-----------VSDFGIAKFLNPDS--- 798
+LH+ I+HRD+ +N+L+ + A +SDFG+ K L+
Sbjct: 129 AHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXF 185
Query: 799 -SNWSELAGTHGYVAPE-------LAYTLKVTEKCDVYSFGVLALEVI-KGKHPRDFLFE 849
N + +GT G+ APE L ++T D++S G + ++ KGKHP F
Sbjct: 186 RXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP----FG 241
Query: 850 XXXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
I + S LH + + + +D +P RPT +V
Sbjct: 242 DKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 681 QQEEFLNEIQALTEIRHRNIVKFY----GFCSHPKHSFIIYEYLESGSLDKILCNDASAK 736
+++ F E + L ++H NIV+FY K ++ E SG+L L K
Sbjct: 68 ERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK 127
Query: 737 ---ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY-EAHVSDFGIAK 792
W ++ ++KG L +LH PPI+HRD+ N+ + + D G+A
Sbjct: 128 IKVLRSWCRQ--ILKG----LQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180
Query: 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+S + GT + APE Y K E DVY+FG LE ++P
Sbjct: 181 L--KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKG 208
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR 698
DF + G G + R K+ + E+ AVK + + Q+E +N +RH
Sbjct: 23 DFVKDIGSGNFGVARLMRDKL-TKELVAVKYIERGAAIDENVQRE-IINH----RSLRHP 76
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
NIV+F P H II EY G L + +CN A + + + + Y H
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCH 133
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
+ I HRD+ +N LLD G A + DFG +K S S + GT Y+APE+
Sbjct: 134 SM---QICHRDLKLENTLLD-GSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEV 188
Query: 816 AYTLKVTEK-CDVYSFGVLALEVIKGKHP 843
+ K DV+S GV ++ G +P
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-----EEFLNEIQA 691
++ + +G+G V R P+ + +AVK G S ++ E L E+
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 692 LTEIR-HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV 750
L ++ H NI++ F++++ ++ G L L + E + +++ +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---KETRKIMRAL 120
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
+ + LH IVHRD+ +N+LLD ++DFG + L+P E+ GT Y
Sbjct: 121 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSY 176
Query: 811 VAPEL----------AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+APE+ Y +V D++S GV+ ++ G P
Sbjct: 177 LAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 215
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 37/269 (13%)
Query: 646 IGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH-RNIVKF 703
+G+G V + S G+ +A K G+ + E L+EI L + ++
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDC--RAEILHEIAVLELAKSCPRVINL 94
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
+ + +I EY G + LC A+ + + +IK + + ++YLH N
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVYYLHQN--- 150
Query: 764 PIVHRDISSKNVLLDLGY---EAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK 820
IVH D+ +N+LL Y + + DFG+++ + + E+ GT Y+APE+
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG-HACELREIMGTPEYLAPEILNYDP 209
Query: 821 VTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSL------HVQ 874
+T D+++ G++A ++ P F+ E D++ Y ++ + +
Sbjct: 210 ITTATDMWNIGIIAYMLLTHTSP--FVGE-------------DNQETYLNISQVNVDYSE 254
Query: 875 KKLMSIMQVAF----SCLDQNPESRPTMK 899
+ S+ Q+A S L +NPE RPT +
Sbjct: 255 ETFSSVSQLATDFIQSLLVKNPEKRPTAE 283
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+ IGKG G V+R K GE AVK F S E S+ +E EI +RH NI+
Sbjct: 14 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREA---EIYQTVMLRHENILG 67
Query: 703 FYGFCSHPKHSF----IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
F + ++ ++ +Y E GSL L N + G + + A L +LH
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEG---MIKLALSTASGLAHLH 123
Query: 759 NNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-----GTH 808
P I HRD+ SKN+L+ ++D G+A + +++ ++A GT
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 182
Query: 809 GYVAPEL---AYTLKVTE---KCDVYSFGVLALEVIK 839
Y+APE+ + +K E + D+Y+ G++ E+ +
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 107/282 (37%), Gaps = 37/282 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLDKIL---------CNDASAKELGWTQRLNVIK 748
N+V G C+ P +I E+ + G+L L D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSF 151
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAG 806
VA + +L + +HRD++++N+LL + DFG+A+ + +PD +
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL 208
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVI---KGKHPRDFLFEXXXXXXXXXIEMLD 863
++APE + T + DV+SFGVL E+ +P + E M
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRA 268
Query: 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
P ++ Q C P RPT + + L
Sbjct: 269 PDYTTPEMY---------QTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 101/217 (46%), Gaps = 31/217 (14%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+ IGKG G V+R K GE AVK F S E S+ +E EI +RH NI+
Sbjct: 11 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREA---EIYQTVMLRHENILG 64
Query: 703 FYGFCSHPKHSF----IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
F + ++ ++ +Y E GSL L N + G + + A L +LH
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEG---MIKLALSTASGLAHLH 120
Query: 759 NNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-----GTH 808
P I HRD+ SKN+L+ ++D G+A + +++ ++A GT
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVGTK 179
Query: 809 GYVAPEL---AYTLKVTE---KCDVYSFGVLALEVIK 839
Y+APE+ + +K E + D+Y+ G++ E+ +
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 216
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +G+V A +G A+KK + P E+ F + + E++ L +RH N++
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSEL-FAKRAY-RELRLLKHMRHENVIGLL 90
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P + + YL + L ++LG + ++ + L Y+H
Sbjct: 91 DVFT-PDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG- 148
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG---THGYVAPELAYT- 818
I+HRD+ N+ ++ E + DFG+A+ + SE+ G T Y APE+
Sbjct: 149 --IIHRDLKPGNLAVNEDCELKILDFGLARQAD------SEMXGXVVTRWYRAPEVILNW 200
Query: 819 LKVTEKCDVYSFGVLALEVIKGK 841
++ T+ D++S G + E+I GK
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 73
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 74 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 127
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 128 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 184
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 185 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 128
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 189 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F + G G+VY+ +P GE + L S + +E L+E
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 134
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 247
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 248 PPICT----IDVYMIMVKCWMIDADSRPKFREL 276
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 76
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 77 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 130
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 131 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 187
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 188 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I Y G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL----------CND 732
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L C +
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 733 AS---AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
S ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSGE-IFAVKKFHSPLPGEMSFQQEE--FLNEIQALTEI 695
DF IG+G G V K+ + + +FA+K + EM + E F E L
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNK---WEMLKRAETACFREERDVLVNG 131
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCN--DASAKELGWTQRLNVIKGVADA 753
+ I + + +++ +Y G L +L D +E+ ++ + D+
Sbjct: 132 DSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAI-DS 190
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-GTHGYVA 812
+ LH VHRDI N+L+D+ ++DFG L D + S +A GT Y++
Sbjct: 191 VHQLH------YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYIS 244
Query: 813 PELAYTL-----KVTEKCDVYSFGVLALEVIKGKHP 843
PE+ + + +CD +S GV E++ G+ P
Sbjct: 245 PEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 84
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 138
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 139 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 196 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F +G G G+VY+ +P GE + L S + +E L+E
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 129
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG AK L + + G
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 242
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 243 PPICT----IDVYMIMRKCWMIDADSRPKFREL 271
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 107/273 (39%), Gaps = 19/273 (6%)
Query: 634 ISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-EEFLNEIQA 691
I +F + G G+VY+ +P GE + L S + +E L+E
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 692 LTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
+ + + ++ + G C I LD + +G LN +A
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV---REHKDNIGSQYLLNWCVQIA 127
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--G 809
+ YL + +VHRD++++NVL+ ++DFG+AK L + + G
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRLPY 868
++A E T + DV+S+GV E++ G P D + E RLP
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE----RLPQ 240
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
P + + + + C + +SRP + +
Sbjct: 241 PPICT----IDVYMIMVKCWMIDADSRPKFREL 269
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 208
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 91
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 92 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 145
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 146 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 202
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 203 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 80
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 81 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 134
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 135 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 191
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 192 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 84
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 85 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 138
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 139 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 195
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 196 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLDKIL---------CNDASAKELGWTQRLNVIK 748
N+V G C+ P +I E+ + G+L L D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSF 151
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAG 806
VA + +L + +HRD++++N+LL + DFG+A+ + +PD +
Sbjct: 152 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 208
Query: 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++APE + T + DV+SFGVL E+
Sbjct: 209 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 28/223 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-----EEFLNEIQA 691
++ + +G+G V R P+ + +AVK G S ++ E L E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 692 LTEIR-HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV 750
L ++ H NI++ F++++ ++ G L L + E + +++ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---KETRKIMRAL 133
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
+ + LH IVHRD+ +N+LLD ++DFG + L+P E+ GT Y
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLREVCGTPSY 189
Query: 811 VAPEL----------AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+APE+ Y +V D++S GV+ ++ G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 106
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 160
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 161 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 217
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 218 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQGKAFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ + ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I Y G+L + L
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
N +++ + ++ +A + YL + +HRD++++NVL+ ++DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFG 202
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ +N G ++APE + T + DV+SFGVL E+
Sbjct: 203 LARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 85
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 86 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 139
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 140 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 196
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 197 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 77
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 78 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 131
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 132 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 188
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 189 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 114/276 (41%), Gaps = 35/276 (12%)
Query: 232 FDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRG 291
F +C+ + +P IS TN R L L+ N++ I H R
Sbjct: 45 FSKVICVRKNLREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRT 102
Query: 292 TVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRC-PQ 350
+F L +L L L N LT T PN F+ LS ++ W R P
Sbjct: 103 IEIGAFNGLANLNTLELFDNRLT--------TIPNGAFVYLS------KLKELWLRNNPI 148
Query: 351 LSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLS 410
S+ + N I L++GE +L Y+ S G L N+ YLN L+
Sbjct: 149 ESIPSYAFNRIPSLRRLDLGELKRLSYI--SEGAFEG-----LSNLRYLN--------LA 193
Query: 411 GCIPRE---LGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDN 467
C RE L LI L+ LDLS N+LS P S L+ L L + +++ DN
Sbjct: 194 MCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253
Query: 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYN 503
L L E++L+HN L + LE+++L +N
Sbjct: 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 350 QLSLLDVSINNISGSIPLEIGE---SLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLS--- 403
L +L +S N+I +EIG L L+L N + IP G +YL++L
Sbjct: 89 HLEILQLSRNHIRT---IEIGAFNGLANLNTLELFDNRLT-TIPN--GAFVYLSKLKELW 142
Query: 404 LSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPE-SLGSLVKLYYLNLSHNKLSQQIP 462
L N + + +L LDL +++ E + L L YLNL+ L ++IP
Sbjct: 143 LRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL-REIP 201
Query: 463 IELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHI 522
L LI L ELDLS N L + L+KL + + + + F+ + L+ I
Sbjct: 202 -NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEI 260
Query: 523 DISYNKL 529
++++N L
Sbjct: 261 NLAHNNL 267
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 91
Query: 699 NIVKFYGFCSHPKHS-FIIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 92 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 151
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 152 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI- 695
DF+ IG+G + V ++ + I+A+K L +E ++ +Q +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKEL-----VNDDEDIDWVQTEKHVF 63
Query: 696 ----RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
H +V + F + EY+ G L + + ++L ++
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEIS 120
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTHGY 810
AL YLH I++RD+ NVLLD ++D+G+ K L P + S GT Y
Sbjct: 121 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNY 176
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
+APE+ D ++ GVL E++ G+ P D +
Sbjct: 177 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 310 QNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLE 368
+++L + E G +P F D+ + FF + DW Q ++ NISG L+
Sbjct: 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNV--DWDMMEQKQVVPPFKPNISGEFGLD 307
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 19/217 (8%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI- 695
DF+ IG+G + V ++ + I+A+K L + +E ++ +Q +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-----DEDIDWVQTEKHVF 59
Query: 696 ----RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
H +V + F + EY+ G L + + ++L ++
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEIS 116
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTHGY 810
AL YLH I++RD+ NVLLD ++D+G+ K L P + S GT Y
Sbjct: 117 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNY 172
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
+APE+ D ++ GVL E++ G+ P D +
Sbjct: 173 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 310 QNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLE 368
+++L + E G +P F D+ + FF + DW Q ++ NISG L+
Sbjct: 247 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNV--DWDMMEQKQVVPPFKPNISGEFGLD 303
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 29/219 (13%)
Query: 646 IGKGGHGSVYRA--KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IG+G +G V A V + A+KK SP + Q+ L EIQ L RH N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRV-AIKKI-SPFEHQTYCQRT--LREIQILLRFRHENVIGI 106
Query: 704 YGFCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
+ +I+ + +E+ L K+L +++L + + L Y+H
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMET-DLYKLL----KSQQLSNDHICYFLYQILRGLKYIH 161
Query: 759 NNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN---WSELAGTHGYVAPEL 815
+ ++HRD+ N+L++ + + DFG+A+ +P+ + +E T Y APE+
Sbjct: 162 SAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 816 AYTLK-VTEKCDVYSFGVLALEVIK------GKHPRDFL 847
K T+ D++S G + E++ GKH D L
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 257
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDA-SAKELGWTQRLNVIKGVADA 753
+H NI+ KH +++ E + G L DKIL S +E + V+ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 754 LFYLHNNCFPPIVHRDISSKNVL-LDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHG 809
+ YLH+ +VHRD+ N+L +D + DFG AK L ++ T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+VAPE+ E CD++S G+L ++ G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 151
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 152 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 205
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 206 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 262
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 263 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN----DASAKELGWT 741
EI+ L ++ H I+K F + +I+ E +E G L DK++ N +A+ K L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCK-LYFY 121
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDS 798
Q L ++ YLH N I+HRD+ +NVLL E ++DFG +K L ++
Sbjct: 122 QMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 170
Query: 799 SNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
S L GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 699 NIVKFYGFCSHPKHS-FIIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN----DASAKELGWT 741
EI+ L ++ H I+K F + +I+ E +E G L DK++ N +A+ K L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCK-LYFY 121
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDS 798
Q L ++ YLH N I+HRD+ +NVLL E ++DFG +K L ++
Sbjct: 122 QMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 170
Query: 799 SNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
S L GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 36/211 (17%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIV--- 701
+G G +GSV A SGE A+KK P E+ F + + E+ L ++H N++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEI-FAKRAY-RELLLLKHMQHENVIGLL 89
Query: 702 ----------KFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
FY F +++ ++++ L KI+ S +++ + ++ +
Sbjct: 90 DVFTPASSLRNFYDF-------YLVMPFMQT-DLQKIMGLKFSEEKIQY-----LVYQML 136
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYV 811
L Y+H+ +VHRD+ N+ ++ E + DFG+A+ + + + + T Y
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGY---VVTRWYR 190
Query: 812 APELAYT-LKVTEKCDVYSFGVLALEVIKGK 841
APE+ + + + D++S G + E++ GK
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 84 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 196
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN----DASAKELGWT 741
EI+ L ++ H I+K F + +I+ E +E G L DK++ N +A+ K L +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCK-LYFY 127
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDS 798
Q L ++ YLH N I+HRD+ +NVLL E ++DFG +K L ++
Sbjct: 128 QMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 176
Query: 799 SNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
S L GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 108 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 220
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG---THGYVAPELAYT- 818
I+HRD+ N+ ++ E + DFG+A+ + E+AG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNW 197
Query: 819 LKVTEKCDVYSFGVLALEVIKGK 841
+ + D++S G + E++ G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 37/219 (16%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 93
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLDKILCND-------ASAKELGWTQRL------ 744
N+V G C+ P +I E+ + G+L L + A E + L
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 745 ----NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDS 798
V KG+ F C +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 154 CYSFQVAKGME---FLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 207 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 699 NIVKFYGFCSHPKHS-FIIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 199
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 106
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 107 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 160
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 161 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 217
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 218 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 105/273 (38%), Gaps = 80/273 (29%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
DF C+G+GG G V+ AK + +A+K+ P +E+ + E++AL ++
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLP---NRELAREKVMREVKALAKLE 62
Query: 697 HRNIVK-FYGFCSHPKHSF---IIYEYLESGSLD--------------KI---------- 728
H IV+ F + P + + +L+ S D KI
Sbjct: 63 HPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKN 122
Query: 729 -------------------LCNDASAKELGWTQR------------LNVIKGVADALFYL 757
LC + K+ W R L++ +A+A+ +L
Sbjct: 123 TVGQLQPSSPKVYLYIQMQLCRKENLKD--WMNRRCSLEDREHGVCLHIFIQIAEAVEFL 180
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA------------ 805
H+ ++HRD+ N+ + V DFG+ ++ D + L
Sbjct: 181 HSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQV 237
Query: 806 GTHGYVAPELAYTLKVTEKCDVYSFGVLALEVI 838
GT Y++PE + + K D++S G++ E++
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG---THGYVAPELAYT- 818
I+HRD+ N+ ++ E + DFG+A+ + E+AG T Y APE+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNW 197
Query: 819 LKVTEKCDVYSFGVLALEVIKGK 841
+ + D++S G + E++ G+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 110
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 111 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 164
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 165 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 221
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 222 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 108
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 109 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 162
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 163 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 219
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 220 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 97
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 98 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 153
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 210
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 211 NQTVDIWSVGCIMAELLTGR 230
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 38/284 (13%)
Query: 646 IGKGGHGSVYRA---KVPSGEI---FAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G+G G VY + GE AVK + S ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAKELGWTQRLNVIKGVA 751
++V+ G S + + ++ E + G L L N+ + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-- 809
D + YL+ F VHRD++++N ++ + + DFG+ + + G G
Sbjct: 141 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX---RKGGKGLL 194
Query: 810 ---YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSR 865
++APE T D++SFGV+ E+ + P ++ M
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDGGY 250
Query: 866 LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
L P + +++ +M++ C NP+ RPT + LL + +
Sbjct: 251 LDQPD-NCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 93 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 205
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+ IGKG G V+R K GE AVK F S E S+ +E EI +RH NI+
Sbjct: 9 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREA---EIYQTVMLRHENILG 62
Query: 703 FYGFCSHPKHSF----IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
F + ++ ++ +Y E GSL L N + G + + A L +LH
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEG---MIKLALSTASGLAHLH 118
Query: 759 NNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGT 807
P I HRD+ SKN+L+ ++D G+A + DS+ + GT
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 176
Query: 808 HGYVAPEL---AYTLKVTE---KCDVYSFGVLALEVIK 839
Y+APE+ + +K E + D+Y+ G++ E+ +
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 214
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 33/218 (15%)
Query: 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+ IGKG G V+R K GE AVK F S E S+ +E EI +RH NI+
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREA---EIYQTVMLRHENILG 61
Query: 703 FYGFCSHPKHSF----IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH 758
F + ++ ++ +Y E GSL L N + G + + A L +LH
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEG---MIKLALSTASGLAHLH 117
Query: 759 NNCF-----PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS------ELAGT 807
P I HRD+ SKN+L+ ++D G+A + DS+ + GT
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGT 175
Query: 808 HGYVAPEL---AYTLKVTE---KCDVYSFGVLALEVIK 839
Y+APE+ + +K E + D+Y+ G++ E+ +
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR 213
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN----DASAKELGWT 741
EI+ L ++ H I+K F + +I+ E +E G L DK++ N +A+ K L +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCK-LYFY 120
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDS 798
Q L ++ YLH N I+HRD+ +NVLL E ++DFG +K L ++
Sbjct: 121 QMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 169
Query: 799 SNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
S L GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 107 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 162
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 219
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 92
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLDKILCNDASA-----------KELGWTQRL-- 744
N+V G C+ P +I E+ + G+L L + + K+ + L
Sbjct: 93 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLIC 152
Query: 745 ---NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSS 799
V KG+ F C +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 153 YSFQVAKGME---FLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 800 NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 206 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN----DASAKELGWT 741
EI+ L ++ H I+K F + +I+ E +E G L DK++ N +A+ K L +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCK-LYFY 121
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDS 798
Q L ++ YLH N I+HRD+ +NVLL E ++DFG +K L ++
Sbjct: 122 QMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 170
Query: 799 SNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
S L GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 63/286 (22%), Positives = 118/286 (41%), Gaps = 44/286 (15%)
Query: 646 IGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
+G+ G VY+ + + A+K G + +EEF +E ++H N
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL---REEFRHEAMLRARLQHPN 73
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG---------- 749
+V G + + +I+ Y G L + L + ++G T +K
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 750 ---VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+A + YL ++ +VH+D++++NVL+ +SD G+ F ++++ +L G
Sbjct: 134 VAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLG 188
Query: 807 TH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEM 861
++APE K + D++S+GV+ EV G P +EM
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP------YCGYSNQDVVEM 242
Query: 862 LDSR--LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+ +R LP P + ++M C ++ P RP K + L
Sbjct: 243 IRNRQVLPCPD-DCPAWVYALM---IECWNEFPSRRPRFKDIHSRL 284
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 84 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG---THGYVAPELAYT- 818
I+HRD+ N+ ++ E + DFG+A+ + E+AG T Y APE+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD------DEMAGFVATRWYRAPEIMLNW 193
Query: 819 LKVTEKCDVYSFGVLALEVIKGK 841
+ + D++S G + E++ G+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 14/154 (9%)
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDA-SAKELGWTQRLNVIKGVADA 753
+H NI+ KH +++ E + G L DKIL S +E + V+ +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKT 133
Query: 754 LFYLHNNCFPPIVHRDISSKNVL-LDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHG 809
+ YLH+ +VHRD+ N+L +D + DFG AK L ++ T
Sbjct: 134 VEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+VAPE+ E CD++S G+L ++ G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQDKRFKNRELQIMRKLDH 100
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 101 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 154
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 155 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 211
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 212 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 19/217 (8%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI- 695
DF+ IG+G + V ++ + I+A+K L + +E ++ +Q +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-----DEDIDWVQTEKHVF 74
Query: 696 ----RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
H +V + F + EY+ G L + + ++L ++
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEIS 131
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF-LNPDSSNWSELAGTHGY 810
AL YLH I++RD+ NVLLD ++D+G+ K L P + S GT Y
Sbjct: 132 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-SXFCGTPNY 187
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
+APE+ D ++ GVL E++ G+ P D +
Sbjct: 188 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 54/272 (19%)
Query: 619 RSVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGE 677
R L F+G ++ ++ + IG+G +G V A + + I A+K + +
Sbjct: 11 RENLYFQGG----SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ 66
Query: 678 MSFQQ-EEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DK--ILCNDA 733
++ + E E++ + ++ H NI + Y ++ ++ E G L DK + +D+
Sbjct: 67 INPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDS 126
Query: 734 SAK------------------------------ELGWTQR----LNVIKGVADALFYLHN 759
+ K L + QR N+++ + AL YLHN
Sbjct: 127 TGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN 186
Query: 760 NCFPPIVHRDISSKNVLL--DLGYEAHVSDFGIAKFL----NPDSSNWSELAGTHGYVAP 813
I HRDI +N L + +E + DFG++K N + + AGT +VAP
Sbjct: 187 Q---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243
Query: 814 ELAYTLKVT--EKCDVYSFGVLALEVIKGKHP 843
E+ T + KCD +S GVL ++ G P
Sbjct: 244 EVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 29/215 (13%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 82
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLD-------------KILCNDASAKELGWTQRL 744
N+V G C+ P +I E+ + G+L K+ D L +
Sbjct: 83 NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 142
Query: 745 NVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWS 802
VA + +L + +HRD++++N+LL + DFG+A+ + +PD
Sbjct: 143 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 199
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+ ++APE + T + DV+SFGVL E+
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 94 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 206
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 116/286 (40%), Gaps = 44/286 (15%)
Query: 646 IGKGGHGSVYR------AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
+G+ G VY+ A + A+K G + +EEF +E ++H N
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPL---REEFRHEAMLRARLQHPN 90
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG---------- 749
+V G + + +I+ Y G L + L + ++G T +K
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 750 ---VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG 806
+A + YL ++ +VH+D++++NVL+ +SD G+ F ++++ +L G
Sbjct: 151 VAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGL--FREVYAADYYKLLG 205
Query: 807 TH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEM 861
++APE K + D++S+GV+ EV G P +EM
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP------YCGYSNQDVVEM 259
Query: 862 LDSR--LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
+ +R LP P + + C ++ P RP K + L
Sbjct: 260 IRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 29/221 (13%)
Query: 635 SATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694
+ +DF+ IGKG G V A+ + E+F K Q++ L + +
Sbjct: 35 AKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKV---------LQKKAILKKKEEKHI 85
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKI--LCNDASAKELGWT-QRLNVI---- 747
+ RN++ + KH F++ + + DK+ + + + EL + QR
Sbjct: 86 MSERNVL-----LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPR 140
Query: 748 -----KGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS 802
+A AL YLH+ IV+RD+ +N+LLD ++DFG+ K +S S
Sbjct: 141 ARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTS 197
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT Y+APE+ + D + G + E++ G P
Sbjct: 198 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 90/213 (42%), Gaps = 27/213 (12%)
Query: 646 IGKGGHGSVYRA------KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR- 698
+G+G G V A K + AVK G + ++E++ L I H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE---GATHSEHRALMSELKILIHIGHHL 93
Query: 699 NIVKFYGFCSHPKHSF-IIYEYLESGSLDKILCN-----------DASAKELGWTQRLNV 746
N+V G C+ P +I E+ + G+L L + D L +
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNWSEL 804
VA + +L + +HRD++++N+LL + DFG+A+ + +PD +
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 805 AGTHGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
++APE + T + DV+SFGVL E+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 114/284 (40%), Gaps = 38/284 (13%)
Query: 646 IGKGGHGSVYRA---KVPSGEI---FAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G+G G VY + GE AVK + S ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAKELGWTQRLNVIKGVA 751
++V+ G S + + ++ E + G L L N+ + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-- 809
D + YL+ F VHRD++++N ++ + + DFG+ + + G G
Sbjct: 141 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX---RKGGKGLL 194
Query: 810 ---YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSR 865
++APE T D++SFGV+ E+ + P ++ M
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDGGY 250
Query: 866 LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
L P + +++ +M++ C NP RPT + LL + +
Sbjct: 251 LDQPD-NCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 25/238 (10%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + ++V+ G S + + ++ E + G L L N+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
+ + + +AD + YL+ F VHRD++++N ++ + + DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY- 181
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G ++APE T D++SFGV+ E+ + P ++
Sbjct: 182 -ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGL 236
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
M L P + +++ +M++ C NP+ RPT + LL + +
Sbjct: 237 SNEQVLKFVMDGGYLDQPD-NCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
N F +GKGG G V +V +G+++A KK + + LNE Q L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-IKKRKGEAMALNEKQILEKVN 242
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK-------ELGWTQRLNVIKG 749
R +V YE ++ L L N K + G+ +
Sbjct: 243 SRFVVSLA----------YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE------- 285
Query: 750 VADALFYLHNNCF-------PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS 802
A A+FY C IV+RD+ +N+LLD +SD G+A + P+
Sbjct: 286 -ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIK 343
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 37/241 (15%)
Query: 622 LTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRA------KVPSGEIFAVKKFH--SP 673
LT + + VY + + +++ +G G G V A K + I + +KF S
Sbjct: 135 LTVDDQSVYPKALR--DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSA 192
Query: 674 LPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN- 731
+ + E EI+ L ++ H I+K F + +I+ E +E G L DK++ N
Sbjct: 193 READPALNVE---TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK 248
Query: 732 ---DASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HV 785
+A+ K L + Q L ++ YLH N I+HRD+ +NVLL E +
Sbjct: 249 RLKEATCK-LYFYQMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 297
Query: 786 SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKH 842
+DFG +K L ++S L GT Y+APE+ ++ D +S GV+ + G
Sbjct: 298 TDFGHSKILG-ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 356
Query: 843 P 843
P
Sbjct: 357 P 357
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 111 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 166
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 223
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQGKAFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY-TLKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNAMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 35/218 (16%)
Query: 640 FNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLN-EIQALTEIRH 697
+ IG G G VY+AK+ SGE+ A+KK Q + F N E+Q + ++ H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---------LQGKAFKNRELQIMRKLDH 72
Query: 698 RNIVKF-YGFCSHPKHSFIIY-----EYLESGSLDKILCNDASAKELGWTQRLNVIK--- 748
NIV+ Y F S + +Y +Y+ ++ ++ + + AK Q L VI
Sbjct: 73 CNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK-----QTLPVIYVKL 126
Query: 749 ---GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA-HVSDFGIAKFLNPDSSNWSEL 804
+ +L Y+H+ I HRDI +N+LLD + DFG AK L N S +
Sbjct: 127 YMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYI 183
Query: 805 AGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGK 841
+ Y APEL + T DV+S G + E++ G+
Sbjct: 184 CSRY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 93 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 205
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 93 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 205
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 99 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 154
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 211
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 100/238 (42%), Gaps = 25/238 (10%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + ++V+ G S + + ++ E + G L L N+
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
+ + + +AD + YL+ F VHRD++++N ++ + + DFG+ + +
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY- 180
Query: 797 DSSNWSELAGTH----GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXX 851
+++ G ++APE T D++SFGV+ E+ + P ++
Sbjct: 181 -ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGL 235
Query: 852 XXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
M L P + +++ +M++ C NP+ RPT + LL + +
Sbjct: 236 SNEQVLKFVMDGGYLDQPD-NCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 85
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 86 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 141
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 198
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 199 NQTVDIWSVGCIMAELLTGR 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 94 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 206
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 94 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 206
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N +L +I + L Y+H+
Sbjct: 84 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 196
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 83
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 84 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 139
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 196
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 197 NQTVDIWSVGCIMAELLTGR 216
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 92/221 (41%), Gaps = 35/221 (15%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
N F +GKGG G V +V +G+++A KK + + LNE Q L ++
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR-IKKRKGEAMALNEKQILEKVN 242
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAK-------ELGWTQRLNVIKG 749
R +V YE ++ L L N K + G+ +
Sbjct: 243 SRFVVSLA----------YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPE------- 285
Query: 750 VADALFYLHNNCF-------PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS 802
A A+FY C IV+RD+ +N+LLD +SD G+A + P+
Sbjct: 286 -ARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIK 343
Query: 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT GY+APE+ + T D ++ G L E+I G+ P
Sbjct: 344 GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 100 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 155
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 212
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCN----DASAKELGWT 741
EI+ L ++ H I+K F + +I+ E +E G L DK++ N +A+ K L +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCK-LYFY 246
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDS 798
Q L ++ YLH N I+HRD+ +NVLL E ++DFG +K L ++
Sbjct: 247 QMLLAVQ-------YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG-ET 295
Query: 799 SNWSELAGTHGYVAPELAYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
S L GT Y+APE+ ++ D +S GV+ + G P
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 108 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 220
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 85 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 140
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 197
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 637 TNDFNAEHCIGKGGHGSVYRAKVPSG-EIFAVK---KFHSPLPGEMSFQQEEFLNEIQAL 692
D+ IG+G G V + S +++A+K KF + +F EE +I A
Sbjct: 73 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE--RDIMAF 130
Query: 693 TEIRHRNIVK-FYGFCSHPKHSFIIYEYLESGSLDKILCN-DASAKELGWTQRLNVIKGV 750
+V+ FY F ++ +++ EY+ G L ++ N D K W + V
Sbjct: 131 ANSPW--VVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EV 182
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-GTHG 809
AL +H+ F +HRD+ N+LLD ++DFG +N + + A GT
Sbjct: 183 VLALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD 239
Query: 810 YVAPELAYTLK----VTEKCDVYSFGVLALEVIKGKHP 843
Y++PE+ + +CD +S GV E++ G P
Sbjct: 240 YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 90 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 202
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 21/225 (9%)
Query: 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVK---KFHSPLPGEMSFQQEEFL 686
+E+ +DF IG+G V K+ +G+++A+K K+ GE+S F
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSC----FR 109
Query: 687 NEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV 746
E L R I + + + +++ EY G L +L + +
Sbjct: 110 EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK--FGERIPAEMARFY 167
Query: 747 IKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA- 805
+ + A+ +H + VHRDI N+LLD ++DFG L D + S +A
Sbjct: 168 LAEIVMAIDSVHRLGY---VHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV 224
Query: 806 GTHGYVAPELAYTLKVTE-------KCDVYSFGVLALEVIKGKHP 843
GT Y++PE+ + +CD ++ GV A E+ G+ P
Sbjct: 225 GTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 92
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 93 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 148
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 205
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 206 NQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 86
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 87 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 142
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 199
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 200 NQTVDIWSVGCIMAELLTGR 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 106
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 107 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 162
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 219
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 220 NQTVDIWSVGCIMAELLTGR 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 84
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 85 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 140
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 197
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 198 NQTVDIWSVGCIMAELLTGR 217
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 90 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 202
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 100 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 155
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 212
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 90 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 202
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 95 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 207
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 99
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 100 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 155
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 212
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 213 NQTVDIWSVGCIMAELLTGR 232
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 103/239 (43%), Gaps = 27/239 (11%)
Query: 684 EFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAK 736
EFLNE + ++V+ G S + + ++ E + G L L N+
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 737 ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796
+ + + +AD + YL+ F VHRD++++N ++ + + DFG+ + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIY- 181
Query: 797 DSSNWSELAGTHG-----YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEX 850
+++ + + G G ++APE T D++SFGV+ E+ + P ++
Sbjct: 182 ETAYYRK--GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQG 235
Query: 851 XXXXXXXXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
M L P + +++ +M++ C NP+ RPT + LL + +
Sbjct: 236 LSNEQVLKFVMDGGYLDQPD-NCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDL 290
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 120 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 236
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 237 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 92/217 (42%), Gaps = 19/217 (8%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI- 695
DF+ IG+G + V ++ + I+A++ L +E ++ +Q +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKEL-----VNDDEDIDWVQTEKHVF 106
Query: 696 ----RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVA 751
H +V + F + EY+ G L + + ++L ++
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAEIS 163
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTHGY 810
AL YLH I++RD+ NVLLD ++D+G+ K L P + S GT Y
Sbjct: 164 LALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTPNY 219
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFL 847
+APE+ D ++ GVL E++ G+ P D +
Sbjct: 220 IAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 310 QNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLE 368
+++L + E G +P F D+ + FF + DW Q ++ NISG L+
Sbjct: 294 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNV--DWDMMEQKQVVPPFKPNISGEFGLD 350
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 89
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 90 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 145
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 202
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 203 NQTVDIWSVGCIMAELLTGR 222
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSG-EIFAVK---KFHSPLPGEMSFQQEEFLNEIQALTE 694
D+ IG+G G V + S +++A+K KF + +F EE +I A
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE--RDIMAFAN 127
Query: 695 IRHRNIVK-FYGFCSHPKHSFIIYEYLESGSLDKILCN-DASAKELGWTQRLNVIKGVAD 752
+V+ FY F ++ +++ EY+ G L ++ N D K W + V
Sbjct: 128 SPW--VVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVL 179
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-GTHGYV 811
AL +H+ F +HRD+ N+LLD ++DFG +N + + A GT Y+
Sbjct: 180 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 236
Query: 812 APELAYTLK----VTEKCDVYSFGVLALEVIKGKHP 843
+PE+ + +CD +S GV E++ G P
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 38/243 (15%)
Query: 620 SVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEM 678
S +F G+ +E++ D +G+G H V + + + +AVK PG +
Sbjct: 2 STDSFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI 53
Query: 679 S---FQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA 735
F++ E L + Q HRN+++ F ++++E + GS IL +
Sbjct: 54 RSRVFREVEMLYQCQG-----HRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKR 105
Query: 736 KELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVSDFGIAK 792
+ + V++ VA AL +LHN I HRD+ +N+L + + + DFG+
Sbjct: 106 RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGS 162
Query: 793 --FLNPDSSNWS--EL---AGTHGYVAPEL--AYTLKVT---EKCDVYSFGVLALEVIKG 840
LN D S S EL G+ Y+APE+ A++ + + ++CD++S GV+ ++ G
Sbjct: 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSG 222
Query: 841 KHP 843
P
Sbjct: 223 YPP 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 98
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 99 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 154
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 211
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 212 NQTVDIWSVGCIMAELLTGR 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 639 DFNAEHCIGKGGHGSVYRAKVPSG-EIFAVK---KFHSPLPGEMSFQQEEFLNEIQALTE 694
D+ IG+G G V + S +++A+K KF + +F EE +I A
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEE--RDIMAFAN 132
Query: 695 IRHRNIVK-FYGFCSHPKHSFIIYEYLESGSLDKILCN-DASAKELGWTQRLNVIKGVAD 752
+V+ FY F ++ +++ EY+ G L ++ N D K W + V
Sbjct: 133 SPW--VVQLFYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEK---WARFYTA--EVVL 184
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELA-GTHGYV 811
AL +H+ F +HRD+ N+LLD ++DFG +N + + A GT Y+
Sbjct: 185 ALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI 241
Query: 812 APELAYTLK----VTEKCDVYSFGVLALEVIKGKHP 843
+PE+ + +CD +S GV E++ G P
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 93
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 94 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 149
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 206
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 207 NQTVDIWSVGCIMAELLTGR 226
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 683 EEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELG--- 739
E EI +RH NIV+F P H I+ EY G L + +CN E
Sbjct: 60 ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARF 119
Query: 740 WTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNP 796
+ Q+L I GV+ Y H + HRD+ +N LLD G A ++DFG +K
Sbjct: 120 FFQQL--ISGVS----YAHAMQ---VAHRDLKLENTLLD-GSPAPRLKIADFGYSKASVL 169
Query: 797 DSSNWSELAGTHGYVAPELAYTLKVTEK-CDVYSFGVLALEVIKGKHP 843
S S + GT Y+APE+ + K DV+S GV ++ G +P
Sbjct: 170 HSQPKSAV-GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 646 IGKGGHG--SVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IG G G + R K S E+ AVK GE E EI +RH NIV+F
Sbjct: 26 IGSGNFGVARLMRDK-QSNELVAVKYIER---GEKI--DENVKREIINHRSLRHPNIVRF 79
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELG---WTQRLNVIKGVADALFYLHNN 760
P H I+ EY G L + +CN E + Q+L I GV+ Y H
Sbjct: 80 KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS----YCHAM 133
Query: 761 CFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
+ HRD+ +N LLD G A + DFG +K S S + GT Y+APE+
Sbjct: 134 ---QVCHRDLKLENTLLD-GSPAPRLKICDFGYSKSSVLHSQPKSTV-GTPAYIAPEVLL 188
Query: 818 TLKVTEK-CDVYSFGVLALEVIKGKHP 843
+ K DV+S GV ++ G +P
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYP 215
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 25/227 (11%)
Query: 683 EEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQ 742
E F ++++ H+++V YG C + ++ E+++ GSLD L + + + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS--- 799
+L V K +A A+ +L N ++H ++ +KN+LL + + K +P S
Sbjct: 115 KLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 800 -NWSELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXX 856
L +V PE K + D +SFG E+ G P L
Sbjct: 172 LPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL------DSQ 225
Query: 857 XXIEMLDSR--LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
++ + R LP P K + + +C+D P+ RP+ + +
Sbjct: 226 RKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSFRAI 266
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 28/223 (12%)
Query: 638 NDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQ-----EEFLNEIQA 691
++ + +G+G V R P+ + +AVK G S ++ E L E+
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 692 LTEIR-HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV 750
L ++ H NI++ F++++ ++ G L L + E + +++ +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSE---KETRKIMRAL 133
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
+ + LH IVHRD+ +N+LLD ++DFG + L+P + GT Y
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP-GEKLRSVCGTPSY 189
Query: 811 VAPEL----------AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+APE+ Y +V D++S GV+ ++ G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEV----DMWSTGVIMYTLLAGSPP 228
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 38/280 (13%)
Query: 646 IGKGGHGSVYRAK---VPSGEI---FAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G+G G VY + GE AVK + S ++ EFLNE +
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 77
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAKELGWTQRLNVIKGVA 751
++V+ G S + + ++ E + G L L N+ + + + +A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG-- 809
D + YL+ F VHRD++++N ++ + + DFG+ + + G G
Sbjct: 138 DGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD---XXRKGGKGLL 191
Query: 810 ---YVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSR 865
++APE T D++SFGV+ E+ + P ++ M
Sbjct: 192 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDGGY 247
Query: 866 LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905
L P + +++ +M++ C NP+ RPT + LL
Sbjct: 248 LDQPD-NCPERVTDLMRM---CWQFNPKMRPTFLEIVNLL 283
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 79 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 195
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 196 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 245
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 14/207 (6%)
Query: 640 FNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
+ E+ IG+G G V K+ + +++ +P + F EI+ + + H N
Sbjct: 28 YTLENTIGRGSWGEV---KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 84
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
I++ Y +++ E G L + + + +E + ++K V A+ Y H
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVAYCHK 141
Query: 760 NCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
+ HRD+ +N L + DFG+A P +++ GT YV+P++
Sbjct: 142 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVL 197
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGKHP 843
L E CD +S GV+ ++ G P
Sbjct: 198 EGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 72 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 188
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 189 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 238
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 110
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 111 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 166
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + T Y APE+ +
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY---VATRWYRAPEIMLNWMHY 223
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 224 NQTVDIWSVGCIMAELLTGR 243
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 107
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 108 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 163
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + T Y APE+ +
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXG---XVATRWYRAPEIMLNWMHY 220
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 221 NQTVDIWSVGCIMAELLTGR 240
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 14/207 (6%)
Query: 640 FNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
+ E+ IG+G G V K+ + +++ +P + F EI+ + + H N
Sbjct: 11 YTLENTIGRGSWGEV---KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPN 67
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN 759
I++ Y +++ E G L + + + +E + ++K V A+ Y H
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRE---SDAARIMKDVLSAVAYCHK 124
Query: 760 NCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA 816
+ HRD+ +N L + DFG+A P +++ GT YV+P++
Sbjct: 125 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKV-GTPYYVSPQVL 180
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGKHP 843
L E CD +S GV+ ++ G P
Sbjct: 181 EGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 71 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 187
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 188 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 237
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 684 EFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKIL------------- 729
+ ++E++ + I +H+NI+ G C+ ++I EY G+L + L
Sbjct: 68 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 730 CNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789
+ ++L ++ VA + YL + +HRD++++NVL+ ++DFG
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFG 184
Query: 790 IAKFLNPDSSNWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEV 837
+A+ ++ G ++APE + T + DV+SFGVL E+
Sbjct: 185 LARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 234
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTG---XVATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A LF+L + I++RD+ NV+LD ++DFG+ K D GT
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD 186
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ + D ++FGVL E++ G+ P
Sbjct: 187 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 5/144 (3%)
Query: 392 QLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLN 451
+L N+ YL L+GN+L L NL+ L L N L + L L YLN
Sbjct: 83 ELTNLTYL---ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139
Query: 452 LSHNKLSQQIPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 510
L+HN+L Q +P + D L +L+ELDLS+N L ++ L+ L L N L +
Sbjct: 140 LAHNQL-QSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198
Query: 511 RCFEEMHGLLHIDISYNKLEGQIP 534
F+ + L +I + N + P
Sbjct: 199 GVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 129 ISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLA 187
I L N+ YL NKL S + LT+LT L ++ N L S+P+ V +LT L +L
Sbjct: 59 IQYLPNVRYLALGGNKLHD--ISALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV 115
Query: 188 LDSNFLNGSIPRSL-GNLTHVVILYLYNNSFFGSIPQEI-GNLKSLFDLELCINQLSGAI 245
L N L S+P + LT++ L L +N S+P+ + L +L +L+L NQL
Sbjct: 116 LVENQLQ-SLPDGVFDKLTNLTYLNLAHNQL-QSLPKGVFDKLTNLTELDLSYNQLQSLP 173
Query: 246 PLSISNLTNLRFLFLYHNELSGI 268
LT L+ L LY N+L +
Sbjct: 174 EGVFDKLTQLKDLRLYQNQLKSV 196
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 90 NLTSISLNGTLLEF----SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL 145
NLT + L G L+ F +L L L N+L + L+NL YL+ + N+L
Sbjct: 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQL 145
Query: 146 FGQIPSGI-GLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSL-G 202
+P G+ LT+LT L +S N L S+P V +LT L L L N L S+P +
Sbjct: 146 -QSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLK-SVPDGVFD 202
Query: 203 NLTHVVILYLYNNSFFGSIP 222
LT + ++L++N + + P
Sbjct: 203 RLTSLQYIWLHDNPWDCTCP 222
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 100/236 (42%), Gaps = 19/236 (8%)
Query: 645 CIGKGGHGSVYRAKVPSG----EIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN- 699
+G G +G V+ + SG +++A+K + + E E Q L IR
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 700 -IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG-VADALFYL 757
+ Y F + K I+ +Y+ G L S +E + + G + AL +L
Sbjct: 121 LVTLHYAFQTETKLHLIL-DYINGGEL----FTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK-FLNPDSSNWSELAGTHGYVAPELA 816
H I++RDI +N+LLD ++DFG++K F+ ++ + GT Y+AP++
Sbjct: 176 HKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 817 YTLKV--TEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPS 870
+ D +S GVL E++ G P E +L S PYP
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISR-RILKSEPPYPQ 287
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQ---QEEFLNEIQALTEIRHRNIVK 702
+G G V + + S + KF S + +EE E+ L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + +I E + G L L S E T + IK + D + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDGVNYLHTK-- 134
Query: 763 PPIVHRDISSKNV-LLDLGYE-AHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
I H D+ +N+ LLD H+ DFG+A + D + + GT +VAPE+
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNY 192
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S GV+ ++ G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP 217
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + D+G+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 95 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + T Y APE+ +
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHY 207
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N +++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+ + + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+EE E+ L ++ H N++ + + +I E + G L L S E T
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGYE-AHVS--DFGIAKFLNPD 797
+ IK + D + YLH I H D+ +N+ LLD H+ DFG+A + D
Sbjct: 119 ---SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQ---QEEFLNEIQALTEIRHRNIVK 702
+G G V + + S + KF S + +EE E+ L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + +I E + G L L S E T + IK + D + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDGVNYLHTK-- 134
Query: 763 PPIVHRDISSKNV-LLDLGYE-AHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
I H D+ +N+ LLD H+ DFG+A + D + + GT +VAPE+
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNY 192
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S GV+ ++ G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 95 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + T Y APE+ +
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHY 207
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQ---QEEFLNEIQALTEIRHRNIVK 702
+G G V + + S + KF S + +EE E+ L ++ H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + +I E + G L L S E T + IK + D + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDGVNYLHTK-- 134
Query: 763 PPIVHRDISSKNV-LLDLGYE-AHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
I H D+ +N+ LLD H+ DFG+A + D + + GT +VAPE+
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNY 192
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S GV+ ++ G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP 217
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 94
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 95 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 150
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + T Y APE+ +
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHY 207
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 208 NQTVDIWSVGCIMAELLTGR 227
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+EE E+ L ++ H N++ + + +I E + G L L S E T
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGYE-AHVS--DFGIAKFLNPD 797
+ IK + D + YLH I H D+ +N+ LLD H+ DFG+A + D
Sbjct: 119 ---SFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 40/231 (17%)
Query: 633 IISATNDFNAEHCIGKGGHGS-VYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA 691
+I F + +G G G+ VYR + ++ AVK+ LP SF E+Q
Sbjct: 19 VIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDV-AVKRI---LPECFSFAD----REVQL 70
Query: 692 LTEI-RHRNIVKFYGFCSHPKHSF-IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKG 749
L E H N++++ FC+ F I L + +L + + A LG + + +++
Sbjct: 71 LRESDEHPNVIRY--FCTEKDRQFQYIAIELCAATLQEYVEQKDFA-HLGL-EPITLLQQ 126
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDL-----GYEAHVSDFGIAKFLNPDSSNWSE- 803
L +LH+ IVHRD+ N+L+ + +A +SDFG+ K L ++S
Sbjct: 127 TTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 804 --LAGTHGYVAPELAYTLKVTEKC--------DVYSFGVLALEVI-KGKHP 843
+ GT G++APE+ ++E C D++S G + VI +G HP
Sbjct: 184 SGVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHP 229
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 683 EEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQ 742
E F ++++ H+++V YG C + ++ E+++ GSLD L + + + W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 743 RLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA--------HVSDFGIAKFL 794
+L V K +A A+ +L N ++H ++ +KN+LL + +SD GI+ +
Sbjct: 115 KLEVAKQLAWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV 171
Query: 795 NPDSSNWSELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXX 852
P L +V PE K + D +SFG E+ G P L
Sbjct: 172 LPKDI----LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----- 222
Query: 853 XXXXXXIEMLDSR--LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRV 901
++ + R LP P K + + +C+D P+ RP+ + +
Sbjct: 223 -DSQRKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSFRAI 266
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 750 VADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHG 809
+A LF+L + I++RD+ NV+LD ++DFG+ K D GT
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD 507
Query: 810 YVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
Y+APE+ + D ++FGVL E++ G+ P
Sbjct: 508 YIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 113/245 (46%), Gaps = 42/245 (17%)
Query: 620 SVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEM 678
S +F G+ +E++ D +G+G H V + + + +AVK PG +
Sbjct: 2 STDSFSGR--FEDVYQLQEDV-----LGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHI 53
Query: 679 S---FQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASA 735
F++ E L + Q HRN+++ F ++++E + GS IL +
Sbjct: 54 RSRVFREVEMLYQCQG-----HRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKR 105
Query: 736 KELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF-- 793
+ + V++ VA AL +LHN I HRD+ +N+L + + VS I F
Sbjct: 106 RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCE--HPNQVSPVKICDFDL 160
Query: 794 -----LNPDSSNWS--EL---AGTHGYVAPEL--AYTLKVT---EKCDVYSFGVLALEVI 838
LN D S S EL G+ Y+APE+ A++ + + ++CD++S GV+ ++
Sbjct: 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220
Query: 839 KGKHP 843
G P
Sbjct: 221 SGYPP 225
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 87/205 (42%), Gaps = 14/205 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQ---QEEFLNEIQALTEIRHRNIVK 702
+G G V + + S + KF S + +EE E+ L ++ H NI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 703 FYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ + +I E + G L L S E T + IK + D + YLH
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDGVNYLHTK-- 134
Query: 763 PPIVHRDISSKNV-LLDLGYE-AHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAYT 818
I H D+ +N+ LLD H+ DFG+A + D + + GT +VAPE+
Sbjct: 135 -KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKNIFGTPEFVAPEIVNY 192
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D++S GV+ ++ G P
Sbjct: 193 EPLGLEADMWSIGVITYILLSGASP 217
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 73/156 (46%), Gaps = 18/156 (11%)
Query: 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELG---WTQRLNVIKGVA 751
+RH NIV+F P H I+ EY G L + +CN E + Q+L I GV+
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS 129
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTH 808
Y H + HRD+ +N LLD G A + DFG +K S S + GT
Sbjct: 130 ----YCHAM---QVCHRDLKLENTLLD-GSPAPRLKICDFGYSKSSVLHSQPKSTV-GTP 180
Query: 809 GYVAPELAYTLKVTEK-CDVYSFGVLALEVIKGKHP 843
Y+APE+ + K DV+S GV ++ G +P
Sbjct: 181 AYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 36/283 (12%)
Query: 646 IGKGGHGSVYRA---KVPSGEI---FAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G+G G VY + GE AVK + S ++ EFLNE +
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 80
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAKELGWTQRLNVIKGVA 751
++V+ G S + + ++ E + G L L N+ + + + +A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
D + YL+ F VHR+++++N ++ + + DFG+ + + +++ G
Sbjct: 141 DGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLP 195
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRL 866
++APE T D++SFGV+ E+ + P ++ M L
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDGGYL 251
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
P + +++ +M++ C NP RPT + LL + +
Sbjct: 252 DQPD-NCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 36/283 (12%)
Query: 646 IGKGGHGSVYRA---KVPSGEI---FAVKKFHSPLPGEMSFQQE-EFLNEIQALTEIRHR 698
+G+G G VY + GE AVK + S ++ EFLNE +
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNE----SASLRERIEFLNEASVMKGFTCH 81
Query: 699 NIVKFYGFCSHPKHSFIIYEYLESGSLDKILC-------NDASAKELGWTQRLNVIKGVA 751
++V+ G S + + ++ E + G L L N+ + + + +A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 752 DALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH--- 808
D + YL+ F VHR+++++N ++ + + DFG+ + + +++ G
Sbjct: 142 DGMAYLNAKKF---VHRNLAARNCMVAHDFTVKIGDFGMTRDIY--ETDYYRKGGKGLLP 196
Query: 809 -GYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEXXXXXXXXXIEMLDSRL 866
++APE T D++SFGV+ E+ + P ++ M L
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQP----YQGLSNEQVLKFVMDGGYL 252
Query: 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909
P + +++ +M++ C NP RPT + LL + +
Sbjct: 253 DQPD-NCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDL 291
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 97/221 (43%), Gaps = 27/221 (12%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK-----KFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
IGKG V R +G+ FAVK KF S PG E+ E ++H +
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSS-PG---LSTEDLKREASICHMLKHPH 87
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV----IKGVADALF 755
IV+ S ++++E+++ L + A A G+ V ++ + +AL
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQILEALR 144
Query: 756 YLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
Y H+N I+HRD+ +NVLL + + DFG+A L GT ++A
Sbjct: 145 YCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKHP----RDFLFE 849
PE+ + DV+ GV+ ++ G P ++ LFE
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 242
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV + V SG AVKK P + + E++ L ++H N++
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 116
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 117 DVFT-PATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 172
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 229
Query: 822 TEKCDVYSFGVLALEVIKGK 841
D++S G + E++ G+
Sbjct: 230 NMTVDIWSVGCIMAELLTGR 249
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 17/202 (8%)
Query: 646 IGKGGHGSV---YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G +GSV Y A++ + AVKK P + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPF--QSLIHARRTYRELRLLKHLKHENVIG 91
Query: 703 FYGFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ P S + YL + + L N ++ L ++ + L Y+H+
Sbjct: 92 LLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-L 819
I+HRD+ NV ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWM 204
Query: 820 KVTEKCDVYSFGVLALEVIKGK 841
+ D++S G + E+++GK
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 29/187 (15%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF----LNEIQALTEIRHRNI 700
IG+G G V++A+ +G+ A+KK M ++E F L EI+ L ++H N+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 78
Query: 701 VKFYGFC---SHPKHS-----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVAD 752
V C + P + ++++++ E L +L N L +R V++ + +
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 135
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL----NPDSSNWSELAGTH 808
L+Y+H N I+HRD+ + NVL+ ++DFG+A+ N + + T
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 809 GYVAPEL 815
Y PEL
Sbjct: 193 WYRPPEL 199
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 645 CIGKGGHGSVYRAKV----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI 700
+G+G G V+ + SG ++A+K + + +I L ++ H +
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDI--LADVNHPFV 92
Query: 701 VKF-YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR--LNVIKGVADALFYL 757
VK Y F + K ++I ++L G L L +KE+ +T+ + +A L +L
Sbjct: 93 VKLHYAFQTEGK-LYLILDFLRGGDLFTRL-----SKEVMFTEEDVKFYLAELALGLDHL 146
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
H+ I++RD+ +N+LLD ++DFG++K GT Y+APE+
Sbjct: 147 HSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 818 TLKVTEKCDVYSFGVLALEVIKGKHP 843
+ D +S+GVL E++ G P
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 640 FNAEHCIGKGGHGSVYRAKVPS-GEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEIR 696
++ +G G V + + S G +A K K +E+ E+ L EI+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
H N++ + + +I E + G L L S E T+ +K + + ++Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYY 129
Query: 757 LHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
LH+ I H D+ +N+ LLD + DFG+A ++ + + + GT +VA
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPAFVA 185
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
PE+ + + D++S GV+ ++ G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 29/187 (15%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF----LNEIQALTEIRHRNI 700
IG+G G V++A+ +G+ A+KK M ++E F L EI+ L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 701 VKFYGFC---SHPKHS-----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVAD 752
V C + P + ++++++ E L +L N L +R V++ + +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL----NPDSSNWSELAGTH 808
L+Y+H N I+HRD+ + NVL+ ++DFG+A+ N + + T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 809 GYVAPEL 815
Y PEL
Sbjct: 194 WYRPPEL 200
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 29/187 (15%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF----LNEIQALTEIRHRNI 700
IG+G G V++A+ +G+ A+KK M ++E F L EI+ L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 701 VKFYGFC---SHPKHS-----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVAD 752
V C + P + ++++++ E L +L N L +R V++ + +
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL----NPDSSNWSELAGTH 808
L+Y+H N I+HRD+ + NVL+ ++DFG+A+ N + + T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 809 GYVAPEL 815
Y PEL
Sbjct: 194 WYRPPEL 200
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 29/187 (15%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEF----LNEIQALTEIRHRNI 700
IG+G G V++A+ +G+ A+KK M ++E F L EI+ L ++H N+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVL------MENEKEGFPITALREIKILQLLKHENV 79
Query: 701 VKFYGFC---SHPKHS-----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVAD 752
V C + P + ++++++ E L +L N L +R V++ + +
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR--VMQMLLN 136
Query: 753 ALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL----NPDSSNWSELAGTH 808
L+Y+H N I+HRD+ + NVL+ ++DFG+A+ N + + T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 809 GYVAPEL 815
Y PEL
Sbjct: 194 WYRPPEL 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 630 YEEIISA-------TNDFNAEHCIGKGGHGSVYRAK-VPSGEIFAVK---KFHSPLPGEM 678
YE+I+ D++ IG+G G V + S +++A+K KF +
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 679 SFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCN-DASAKE 737
+F EE +I A +V+ + K+ +++ EY+ G L ++ N D K
Sbjct: 120 AFFWEE--RDIMAFANSPW--VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEK- 174
Query: 738 LGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPD 797
W + V AL +H+ ++HRD+ N+LLD ++DFG ++
Sbjct: 175 --WAKFYTA--EVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 227
Query: 798 SSNWSELA-GTHGYVAPELAYTLK----VTEKCDVYSFGVLALEVIKGKHP 843
+ A GT Y++PE+ + +CD +S GV E++ G P
Sbjct: 228 GMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + DF +A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGW 740
+EE NEI + ++ H N+++ Y ++ EY++ G L D+I+ + EL
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTEL-- 187
Query: 741 TQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL--DLGYEAHVSDFGIAKFLNPDS 798
+ +K + + + ++H I+H D+ +N+L + + DFG+A+ P
Sbjct: 188 -DTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243
Query: 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
GT ++APE+ V+ D++S GV+A ++ G P
Sbjct: 244 KLKVNF-GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSP 287
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKF 703
+G+G + V A + +G+ +AVK + + E++ L + + ++NI++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEK----QAGHSRSRVFREVETLYQCQGNKNILEL 76
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
F ++++E L+ GS IL + K + V++ VA AL +LH
Sbjct: 77 IEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHTK--- 130
Query: 764 PIVHRDISSKNVLLDLGYE---AHVSDFGIAKFLNPDSS-------NWSELAGTHGYVAP 813
I HRD+ +N+L + + + DF + + ++S + G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 814 EL--AYTLKVT---EKCDVYSFGVLALEVIKGKHP 843
E+ +T + T ++CD++S GV+ ++ G P
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 646 IGKGGHGSV---YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G +GSV Y A++ + AVKK P + E++ L ++H N++
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPF--QSLIHARRTYRELRLLKHLKHENVIG 91
Query: 703 FYGFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ P S + YL + + L N + L ++ + L Y+H+
Sbjct: 92 LLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 150
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-L 819
I+HRD+ NV ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWM 204
Query: 820 KVTEKCDVYSFGVLALEVIKGK 841
+ D++S G + E+++GK
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGK 226
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
I++RD+ +NVLLD +SD G+A L + AGT G++APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 389 IPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLY 448
IPT I+YL+ N+++ P SLINL+ L L +N L SL +L
Sbjct: 38 IPTN-AQILYLH-----DNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLT 91
Query: 449 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 508
L+L N+L+ D L+HL EL + N L E + I R+ L L L N L +
Sbjct: 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGIERLTHLTHLALDQNQLKSI 150
Query: 509 IPRCFEEMHGLLH 521
F+ + L H
Sbjct: 151 PHGAFDRLSSLTH 163
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
Query: 363 GSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLIN 422
S+P I + Q+ YL N I P ++I L L L N+L SL
Sbjct: 32 ASVPAGIPTNAQILYL--HDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQ 89
Query: 423 LEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG 482
L LDL N L+ LV L L + NKL+ ++P ++ L HL+ L L N L
Sbjct: 90 LTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK 148
Query: 483 EKISSRICRMESL 495
R+ SL
Sbjct: 149 SIPHGAFDRLSSL 161
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 6/112 (5%)
Query: 114 LDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVLHISRNWLSGS 172
L L++N++ + P +L NL+ L +N+L G +P G+ LT LTVL + N L+
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQLT-V 102
Query: 173 IPHEV-GQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+P V +L L +L + N L +PR + LTH+ L L N SIP
Sbjct: 103 LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQ-LKSIPH 152
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 61/119 (51%), Gaps = 13/119 (10%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQI-SNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVL 162
F S +L L L +N+L G +P + +L+ L LD N+L +PS + L HL L
Sbjct: 60 FDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLGTNQL-TVLPSAVFDRLVHLKEL 117
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRS----LGNLTHVVILYLYNNSF 217
+ N L+ +P + +LT L LALD N L SIP L +LTH YL+ N +
Sbjct: 118 FMCCNKLT-ELPRGIERLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHA---YLFGNPW 171
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 5/145 (3%)
Query: 194 NGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSI-SNL 252
+ S+P G T+ ILYL++N P +L +L +L L NQL GA+P+ + +L
Sbjct: 31 HASVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSL 87
Query: 253 TNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNY 312
T L L L N+L+ ++P + + +P+ LT L L L+QN
Sbjct: 88 TQLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQ 146
Query: 313 LTGNISETFGTYPNLTFIDLSNNSF 337
L F +LT L N +
Sbjct: 147 LKSIPHGAFDRLSSLTHAYLFGNPW 171
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
I++RD+ +NVLLD +SD G+A L + AGT G++APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
I++RD+ +NVLLD +SD G+A L + AGT G++APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+++ IG G +G V A+ +G+ A+KK P ++ + L E++ L +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFK 111
Query: 697 HRNIVKFYGFCSHP------KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV 750
H NI+ K +++ + +ES L +I+ S++ L + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQII---HSSQPLTLEHVRYFLYQL 167
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNW--SELAG 806
L Y+H+ ++HRD+ N+L++ E + DFG+A+ L +P + +E
Sbjct: 168 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 807 THGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKH 842
T Y APEL +L + T+ D++S G + E++ +
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
I++RD+ +NVLLD +SD G+A L + AGT G++APEL +
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFS 369
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GV E+I + P
Sbjct: 370 VDYFALGVTLYEMIAARGP 388
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 17/202 (8%)
Query: 646 IGKGGHGSV---YRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
+G G +GSV Y A++ + AVKK P + E++ L ++H N++
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPF--QSLIHARRTYRELRLLKHLKHENVIG 83
Query: 703 FYGFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNN 760
+ P S + YL + + L N + L ++ + L Y+H+
Sbjct: 84 LLDVFT-PATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSA 142
Query: 761 CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-L 819
I+HRD+ NV ++ E + DFG+A+ + + + + T Y APE+ +
Sbjct: 143 G---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWM 196
Query: 820 KVTEKCDVYSFGVLALEVIKGK 841
+ D++S G + E+++GK
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGK 218
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR 696
+++ IG G +G V A+ +G+ A+KK P ++ + L E++ L +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAKRTLRELKILKHFK 112
Query: 697 HRNIVKFYGFCSHP------KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV 750
H NI+ K +++ + +ES L +I+ S++ L + +
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQII---HSSQPLTLEHVRYFLYQL 168
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL--NPDSSNW--SELAG 806
L Y+H+ ++HRD+ N+L++ E + DFG+A+ L +P + +E
Sbjct: 169 LRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 807 THGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKH 842
T Y APEL +L + T+ D++S G + E++ +
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + FG+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 14/211 (6%)
Query: 640 FNAEHCIGKGGHGSVYRAKVPS-GEIFAVK--KFHSPLPGEMSFQQEEFLNEIQALTEIR 696
++ +G G V + + S G +A K K +E+ E+ L EI+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 697 HRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFY 756
H N++ + + +I E + G L L S E T+ +K + + ++Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYY 129
Query: 757 LHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
LH+ I H D+ +N+ LLD + DFG+A ++ + + + GT +VA
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF-GNEFKNIFGTPEFVA 185
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
PE+ + + D++S GV+ ++ G P
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 646 IGKGGHG--SVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IG G G + R K S E+ AVK GE E EI +RH NIV+F
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIER---GEKI--DENVKREIINHRSLRHPNIVRF 80
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELG---WTQRLNVIKGVADALFYLHNN 760
P H I+ EY G L + +CN E + Q+L I GV+ Y H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS----YCHAM 134
Query: 761 CFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAK--FLNPDSSNWSELAGTHGYVAPEL 815
+ HRD+ +N LLD G A + FG +K L+ S + GT Y+APE+
Sbjct: 135 ---QVCHRDLKLENTLLD-GSPAPRLKICAFGYSKSSVLH---SQPKDTVGTPAYIAPEV 187
Query: 816 AYTLKVTEK-CDVYSFGVLALEVIKGKHP 843
+ K DV+S GV ++ G +P
Sbjct: 188 LLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + D G+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + D G+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ L K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 EFL---KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Query: 354 LDVSINNISGSIPLEIGESL-QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGC 412
LD+ N +S S+P + L +L+ L L+ N + + L L ++ NKL
Sbjct: 42 LDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 413 IPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLS 472
L+NL L L N L + P SL KL YL+L +N+L D L L
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK 160
Query: 473 ELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527
EL L +N L ++ L+ L L N L + F+ + L + + N
Sbjct: 161 ELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 114 LDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVLHISRNWLSGS 172
LDL +N+L + L+ L L + NKL +P+GI L +L L ++ N L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 173 IPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEI-GNLKSL 231
QL L +L LD N L PR +LT + L L N S+P+ + L SL
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE-LQSLPKGVFDKLTSL 159
Query: 232 FDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGI 268
+L L NQL + LT L+ L L +N+L +
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRV 196
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 64/153 (41%)
Query: 378 LDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFV 437
LDL SN + + L L L+ NKL L NLE L ++ N L
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALP 101
Query: 438 PESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEK 497
LV L L L N+L P D+L L+ L L +N L ++ SL++
Sbjct: 102 IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKE 161
Query: 498 LNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
L L N L + F+++ L + + N+L+
Sbjct: 162 LRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVL 162
+F L L L +N+L + L NLE L + NKL +P G+ L +L L
Sbjct: 56 AFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKL-QALPIGVFDQLVNLAEL 114
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSL-GNLTHVVILYLYNNSFFGSI 221
+ RN L P LT L L+L N L S+P+ + LT + L LYNN
Sbjct: 115 RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVP 173
Query: 222 PQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHN 263
L L L+L NQL + +L L+ L L N
Sbjct: 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 2/162 (1%)
Query: 295 KSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLL 354
K+F LT L L LN N L + F NL + +++N + + + L+ L
Sbjct: 55 KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL 114
Query: 355 DVSINNISGSIPLEIGESL-QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCI 413
+ N + S+P + +SL +L YL L N + + L L L N+L
Sbjct: 115 RLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173
Query: 414 PRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHN 455
L L+ L L N L + SL KL L L N
Sbjct: 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQEN 215
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ L K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 EFL---KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G G +GSV A +G AVKK P + + E++ L ++H N++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHAKRTYRELRLLKHMKHENVIGLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P S + YL + + L N ++L +I + L Y+H+
Sbjct: 88 DVFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKV 821
I+HRD+ N+ ++ E + D G+A+ + + + + T Y APE+ +
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY---VATRWYRAPEIMLNWMHY 200
Query: 822 TEKCDVYSFGVLALEVIKGK 841
+ D++S G + E++ G+
Sbjct: 201 NQTVDIWSVGCIMAELLTGR 220
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 646 IGKGGHG--SVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKF 703
IG G G + R K S E+ AVK GE E EI +RH NIV+F
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIER---GEKI--DENVKREIINHRSLRHPNIVRF 80
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELG---WTQRLNVIKGVADALFYLHNN 760
P H I+ EY G L + +CN E + Q+L I GV+ Y H
Sbjct: 81 KEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVS----YCHAM 134
Query: 761 CFPPIVHRDISSKNVLLDLGYEA---HVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817
+ HRD+ +N LLD G A + FG +K S S + GT Y+APE+
Sbjct: 135 ---QVCHRDLKLENTLLD-GSPAPRLKICAFGYSKSSVLHSQPKSTV-GTPAYIAPEVLL 189
Query: 818 TLKVTEK-CDVYSFGVLALEVIKGKHP 843
+ K DV+S GV ++ G +P
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 297 FRNLTDLVKLRLNQNYLT--GNISET-FGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSL 353
F LT L KL L+ N L+ G S++ FGT +L ++DLS N + S++ QL
Sbjct: 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGT-TSLKYLDLSFNGVI-TMSSNFLGLEQLEH 105
Query: 354 LDVSINNISGSIPLEIGESLQ-LQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLS-G 411
LD +N+ + SL+ L YLD+S + + L L ++GN
Sbjct: 106 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165
Query: 412 CIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHN 455
+P L NL +LDLS L P + SL L LN+SHN
Sbjct: 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 209
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 16/244 (6%)
Query: 149 IPSGIGLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSLGNLTHV 207
+P+GI + T L + N L S+PH V +LT L +L+L SN L+ S +
Sbjct: 22 VPTGIP--SSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78
Query: 208 VILYLYNNSFFGSIPQEIG--NLKSLFDLELCINQLSGAIPLSIS-NLTNLRFLFLYHNE 264
+ YL + SF G I L+ L L+ + L S+ +L NL +L + H
Sbjct: 79 SLKYL-DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137
Query: 265 ----LSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320
+GI G +P F L +L L L+Q L
Sbjct: 138 TRVAFNGIFN---GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTA 194
Query: 321 FGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGE-SLQLQYLD 379
F + +L +++S+N+FF + L +LD S+N+I S E+ L +L+
Sbjct: 195 FNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLN 254
Query: 380 LSSN 383
L+ N
Sbjct: 255 LTQN 258
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
+HRD++++N+LL + DFG+A+ + NPD + ++APE + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 824 KCDVYSFGVLALEVIK---GKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLMSI 880
K DV+S+GVL E+ +P + E + M P ++
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIY-------- 332
Query: 881 MQVAFSCLDQNPESRPTMKRVSQLL 905
Q+ C ++P+ RP + + L
Sbjct: 333 -QIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 12/153 (7%)
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADAL 754
+H NI+ K+ +++ E ++ G L DKIL K + V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL----RQKFFSEREASAVLFTITKTV 129
Query: 755 FYLHNNCFPPIVHRDISSKNVL-LDLG---YEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
YLH +VHRD+ N+L +D + DFG AK L ++ T +
Sbjct: 130 EYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANF 186
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
VAPE+ CD++S GVL ++ G P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 27/143 (18%)
Query: 765 IVHRDISSKNVLLDLGYE-AHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA-----YT 818
+VHRDI +N+L+DL A + DFG L+ +++ GT Y PE +
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLH--DEPYTDFDGTRVYSPPEWISRHQYHA 217
Query: 819 LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDSRLPYPSLHVQKKLM 878
L T V+S G+L +++ G D FE E+L++ L +P+ HV
Sbjct: 218 LPAT----VWSLGILLYDMVCG----DIPFERDQ-------EILEAELHFPA-HVSPDCC 261
Query: 879 SIMQVAFSCLDQNPESRPTMKRV 901
++++ CL P SRP+++ +
Sbjct: 262 ALIR---RCLAPKPSSRPSLEEI 281
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ L K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 EFL---KQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 117 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 169
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 57 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 117 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 169
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 749 GVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTH 808
+ AL+YL ++HRD+ N+LLD + + DFGI+ L D + AG
Sbjct: 132 AIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK-DRSAGCA 188
Query: 809 GYVAPELAYTLKVTE-----KCDVYSFGVLALEVIKGKHP 843
Y+APE T+ + DV+S G+ +E+ G+ P
Sbjct: 189 AYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705
+G+G G V+R S + + KF + G Q EI L RHRNI+ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKF-VKVKGT---DQVLVKKEISILNIARHRNILHLHE 68
Query: 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765
+ +I+E++ SG LD + SA EL + ++ + V +AL +LH++ I
Sbjct: 69 SFESMEELVMIFEFI-SG-LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NI 123
Query: 766 VHRDISSKNVLLDLGYEAHVS--DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
H DI +N++ + + +FG A+ L P N+ L Y APE+ V+
Sbjct: 124 GHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP-GDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 824 KCDVYSFGVLALEVIKGKHPRDFLFE 849
D++S G L ++ G +P FL E
Sbjct: 183 ATDMWSLGTLVYVLLSGINP--FLAE 206
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 113/281 (40%), Gaps = 25/281 (8%)
Query: 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEM--SFQQEEFLNE 688
E+++ F +GKG GSV A++ + VK L ++ S EEFL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 689 IQALTEIRHRNIVKFYGFCSHPKHS------FIIYEYLESGSLDKILCNDASAKE---LG 739
+ E H ++ K G + +I +++ G L L + L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 740 WTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS 799
+ + +A + YL + F +HRD++++N +L V+DFG+++ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRNF---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 800 NWSELAGT--HGYVAPELAYTLKVTEKCDVYSFGVLALEVI-KGKHPRDFLFEXXXXXXX 856
A ++A E T DV++FGV E++ +G+ P +
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP----YAGIENAEI 248
Query: 857 XXIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPT 897
+ +RL P +++ + + + C +P+ RP+
Sbjct: 249 YNYLIGGNRLKQPPECMEE----VYDLMYQCWSADPKQRPS 285
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 682 QEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWT 741
+E+ E+ L EI+H N++ + + +I E + G L L S E T
Sbjct: 58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV-LLDLGY---EAHVSDFGIAKFLNPD 797
+ +K + + ++YLH+ I H D+ +N+ LLD + DFG+A ++
Sbjct: 118 E---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF- 170
Query: 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + + GT +VAPE+ + + D++S GV+ ++ G P
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 174/426 (40%), Gaps = 35/426 (8%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163
+F+ + L LD+ N + + P L L+ L+ N+L T+LT LH
Sbjct: 54 NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 113
Query: 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+ N + + + L L L N L+ + + L ++ L L NN +
Sbjct: 114 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 173
Query: 224 EIGNL--KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXX 281
E+ SL LEL NQ+ P + L LFL + +L + +++
Sbjct: 174 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANT- 232
Query: 282 XXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEI 341
S RNL+ L +Q T N + + NLT +DLS N+
Sbjct: 233 --------------SIRNLS----LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 274
Query: 342 LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIP----TQLGNII 397
+ PQL + NNI + ++YL+L ++ I ++ +
Sbjct: 275 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS 334
Query: 398 Y-----LNRLSLSGNKLSGCIPRELGSLINLEYLDLSAN--NLSNFVPESLGSLVK--LY 448
+ L L++ N + G LINL+YL LS + +L E+ SL L+
Sbjct: 335 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLH 394
Query: 449 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR-MESLEKLNLSYNNLSG 507
LNL+ NK+S+ L HL LDL N +G++++ + R +E++ ++ LSYN
Sbjct: 395 ILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ 454
Query: 508 LIPRCF 513
L F
Sbjct: 455 LTRNSF 460
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 151/387 (39%), Gaps = 66/387 (17%)
Query: 179 QLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCI 238
+ TV +++A S+ +P L T++ +L L +N L L++
Sbjct: 11 KCTVSHEVADCSHLKLTQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGF 68
Query: 239 NQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFR 298
N +S P L L+ L L HNELS + K+F
Sbjct: 69 NTISKLEPELCQKLPMLKVLNLQHNELSQL------------------------SDKTFA 104
Query: 299 NLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSI 358
T+L +L L N + + F NL +DLS+N L + L L +S
Sbjct: 105 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSN 164
Query: 359 NNISG--SIPLEIGESLQLQYLDLSSNYIVGEIP----------------TQLGNIIY-- 398
N I S L+I + L+ L+LSSN I P QLG +
Sbjct: 165 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 224
Query: 399 ---------LNRLSLSGNKLSGCIPRELGSL--INLEYLDLSANNLSNFVPESLGSLVKL 447
+ LSLS ++LS L NL LDLS NNL+ +S L +L
Sbjct: 225 LCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQL 284
Query: 448 YYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKIS-SRICRMES--------LEKL 498
Y L +N + L L ++ L+L +F + IS + + +++ LE L
Sbjct: 285 EYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHL 344
Query: 499 NLSYNNLSGLIPRCFEEMHGLLHIDIS 525
N+ N++ G+ F + L ++ +S
Sbjct: 345 NMEDNDIPGIKSNMFTGLINLKYLSLS 371
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 417 LGSLINLEYLDLSANNLSNFVPES--------LGSLVKLYYLNLSHNKLSQQIPIEL-DN 467
L L LE LDL NNL+ + L L L+ LNL N +IP+E+ +
Sbjct: 510 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGF-DEIPVEVFKD 568
Query: 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF-EEMHGLLHIDISY 526
L L +DL N L +S SL+ LNL N ++ + + F L +D+ +
Sbjct: 569 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 628
Query: 527 NKLE 530
N +
Sbjct: 629 NPFD 632
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC-RMESL 495
VP+ L + + + LNL+HN+L + L+ LD+ N + K+ +C ++ L
Sbjct: 29 VPDDLPTNITV--LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-KLEPELCQKLPML 85
Query: 496 EKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
+ LNL +N LS L + F L + + N ++
Sbjct: 86 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ 120
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 112/281 (39%), Gaps = 45/281 (16%)
Query: 291 GTVPK----SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNN-----SFFGEI 341
++PK SF+ L L L + N + G S F NL ++ LSN+ + E
Sbjct: 325 ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET 384
Query: 342 LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQ----LGNI- 396
P L +L+++ N IS L+ LDL N I E+ Q L NI
Sbjct: 385 FVSLAHSP-LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIF 443
Query: 397 -IYLNR---LSLSGNKLS------------------GCIPRELGSLINLEYLDLSANNLS 434
IYL+ L L+ N + P L NL LDLS NN++
Sbjct: 444 EIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 503
Query: 435 NFVPESLGSLVKLYYLNLSHNKLSQQI-------PIE-LDNLIHLSELDLSHNFLGEKIS 486
N + L L KL L+L HN L++ PI L L HL L+L N E
Sbjct: 504 NINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPV 563
Query: 487 SRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527
+ L+ ++L NNL+ L F L +++ N
Sbjct: 564 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 604
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W LAGT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LAGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 637 TNDFNAEHCIGKGGHGSVYR-AKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
T +F+ IG G GSV++ K G I+A+K+ PL G S ++ L E+ A +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVL 63
Query: 696 -RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADA 753
+H ++V+++ + H I EY GSL D I N + +++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 754 LFYLHNNCFPPIVHRDISSKNVLL 777
L Y+H+ +VH DI N+ +
Sbjct: 124 LRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 17/197 (8%)
Query: 325 PNLTFIDLSNN--SFFGEI-LSDWGRCPQLSLLDVSINNI----SGSIPLEIGESLQLQY 377
P+L F+DLS N SF G SD+G L LD+S N + S + LE E L Q+
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGT-TSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 405
Query: 378 LDLSSNYIVGEIPT--QLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLS- 434
+L + E L N+IYL+ +S L +LE L ++ N+
Sbjct: 406 SNLKQ---MSEFSVFLSLRNLIYLD---ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 459
Query: 435 NFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMES 494
NF+P+ L L +L+LS +L Q P ++L L L+++ N L R+ S
Sbjct: 460 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTS 519
Query: 495 LEKLNLSYNNLSGLIPR 511
L+K+ L N PR
Sbjct: 520 LQKIWLHTNPWDCSCPR 536
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 163/423 (38%), Gaps = 89/423 (21%)
Query: 225 IGNLKSLFDLELCINQL-SGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXX 283
IG+LK+L +L + N + S +P SNLTNL L L N++ I ++
Sbjct: 120 IGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLN 179
Query: 284 XXXXHFRGTV----PKSFRNLTDLVKLRLNQNYLTGNISET-----------------FG 322
+ P +F+ + L KL L N+ + N+ +T F
Sbjct: 180 LSLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFR 238
Query: 323 TYPNLTFID----------------LSNNSFFGEILSDWGRC----PQLSLLDVSINNIS 362
NL D L+ ++ + + D C SL+ V+I +
Sbjct: 239 NEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVK 298
Query: 363 GSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNK-------------- 408
+ + Q+L+L N G+ PT + L RL+ + NK
Sbjct: 299 -----DFSYNFGWQHLEL-VNCKFGQFPTL--KLKSLKRLTFTSNKGGNAFSEVDLPSLE 350
Query: 409 ----------LSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLS 458
GC + +L+YLDLS N + LG L +L +L+ H+ L
Sbjct: 351 FLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHSNLK 409
Query: 459 Q----QIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLS-GLIPRCF 513
Q + + L NLI+ LD+SH + + SLE L ++ N+ +P F
Sbjct: 410 QMSEFSVFLSLRNLIY---LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466
Query: 514 EEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNKGLYGDIRGFPSCMSYKKAS-RK 572
E+ L +D+S +LE P T F L +LQ ++ P + + S +K
Sbjct: 467 TELRNLTFLDLSQCQLEQLSP--TAFNS--LSSLQVLNMASNQLKSVPDGIFDRLTSLQK 522
Query: 573 IWI 575
IW+
Sbjct: 523 IWL 525
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 161/394 (40%), Gaps = 45/394 (11%)
Query: 125 IPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHL-------TVLHISRNWLSGSIPHEV 177
+P SNL+NLE+LD S+NK+ + + +L + + N++ E+
Sbjct: 141 LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI 200
Query: 178 GQLTVLNQLALDSNFLNGSIPRSL-----GNLTHVVILYLYNN-----SFFGSIPQEIGN 227
L++L L +NF + ++ ++ G H ++L + N F S + + N
Sbjct: 201 R----LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCN 256
Query: 228 --------------LKSLFDLELCINQLS--GAIPLSISNLTNLRFLFLY-HNELSGIIP 270
L + DL C+ +S + ++I + + + F + H EL
Sbjct: 257 LTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKF 316
Query: 271 QEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLT--GNISET-FGTYPNL 327
+ +G S +L L L L++N L+ G S++ FGT +L
Sbjct: 317 GQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGT-TSL 375
Query: 328 TFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQ-LQYLDLSSNYIV 386
++DLS N + S++ QL LD +N+ + SL+ L YLD+S +
Sbjct: 376 KYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 434
Query: 387 GEIPTQLGNIIYLNRLSLSGNKLS-GCIPRELGSLINLEYLDLSANNLSNFVPESLGSLV 445
+ L L ++GN +P L NL +LDLS L P + SL
Sbjct: 435 VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494
Query: 446 KLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 479
L LN++ N+L D L L ++ L N
Sbjct: 495 SLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTN 528
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 374 QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNL 433
+LQ LDLS I ++ +L+ L L+GN + L +L+ L NL
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 434 SNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLSELDLSHNFLGEKISSRIC 490
++ +G L L LN++HN + S ++P NL +L LDLS N KI S C
Sbjct: 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN----KIQSIYC 166
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 74 AWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLS 133
A++GIF N + + + S L F+ +L +LDL +L + P ++LS
Sbjct: 436 AFNGIF-NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS 494
Query: 134 NLEYLDFSANKLFGQIPSGI-GLLTHLTVLHISRNWLSGSIPH 175
+L+ L+ ++N+L +P GI LT L + + N S P
Sbjct: 495 SLQVLNMASNQL-KSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 103 FSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVL 162
+SF SFP L LDL E+ I +LS+L L + N + L+ L L
Sbjct: 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNN 215
L+ +G L L +L + N + +P NLT++ L L +N
Sbjct: 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 77
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 78 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 131
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ GT Y+ PE +
Sbjct: 132 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 245
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 246 PDI-PEKDLQDVLKC---CLKRDPKQR 268
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 646 IGKGGHGSVYRAK-VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR----HRNI 700
+ +GG VY A+ V SG +A+K+ +S ++E+ IQ + ++ H NI
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL-------LSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 701 VKFYGFCSHPKHS-------FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753
V+F S K F++ L G L + L S L L + A
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN--PDSSNWSELA------ 805
+ ++H PPI+HRD+ +N+LL + DFG A ++ PD S WS
Sbjct: 149 VQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYS-WSAQRRALVEE 206
Query: 806 -----GTHGYVAPE---LAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
T Y PE L + EK D+++ G + + +HP
Sbjct: 207 EITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP 252
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 174/426 (40%), Gaps = 35/426 (8%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163
+F+ + L LD+ N + + P L L+ L+ N+L T+LT LH
Sbjct: 49 NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 108
Query: 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+ N + + + L L L N L+ + + L ++ L L NN +
Sbjct: 109 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 168
Query: 224 EIGNL--KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXX 281
E+ SL LEL NQ+ P + L LFL + +L + +++
Sbjct: 169 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANT- 227
Query: 282 XXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEI 341
S RNL+ L +Q T N + + NLT +DLS N+
Sbjct: 228 --------------SIRNLS----LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 269
Query: 342 LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIP----TQLGNII 397
+ PQL + NNI + ++YL+L ++ I ++ +
Sbjct: 270 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS 329
Query: 398 Y-----LNRLSLSGNKLSGCIPRELGSLINLEYLDLSAN--NLSNFVPESLGSLVK--LY 448
+ L L++ N + G LINL+YL LS + +L E+ SL L+
Sbjct: 330 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLH 389
Query: 449 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR-MESLEKLNLSYNNLSG 507
LNL+ NK+S+ L HL LDL N +G++++ + R +E++ ++ LSYN
Sbjct: 390 ILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ 449
Query: 508 LIPRCF 513
L F
Sbjct: 450 LTRNSF 455
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 151/387 (39%), Gaps = 66/387 (17%)
Query: 179 QLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCI 238
+ TV +++A S+ +P L T++ +L L +N L L++
Sbjct: 6 KCTVSHEVADCSHLKLTQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGF 63
Query: 239 NQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFR 298
N +S P L L+ L L HNELS + K+F
Sbjct: 64 NTISKLEPELCQKLPMLKVLNLQHNELSQL------------------------SDKTFA 99
Query: 299 NLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSI 358
T+L +L L N + + F NL +DLS+N L + L L +S
Sbjct: 100 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSN 159
Query: 359 NNISG--SIPLEIGESLQLQYLDLSSNYIVGEIP----------------TQLGNIIY-- 398
N I S L+I + L+ L+LSSN I P QLG +
Sbjct: 160 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 219
Query: 399 ---------LNRLSLSGNKLSGCIPRELGSL--INLEYLDLSANNLSNFVPESLGSLVKL 447
+ LSLS ++LS L NL LDLS NNL+ +S L +L
Sbjct: 220 LCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQL 279
Query: 448 YYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKIS-SRICRMES--------LEKL 498
Y L +N + L L ++ L+L +F + IS + + +++ LE L
Sbjct: 280 EYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHL 339
Query: 499 NLSYNNLSGLIPRCFEEMHGLLHIDIS 525
N+ N++ G+ F + L ++ +S
Sbjct: 340 NMEDNDIPGIKSNMFTGLINLKYLSLS 366
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 417 LGSLINLEYLDLSANNLSNFVPES--------LGSLVKLYYLNLSHNKLSQQIPIEL-DN 467
L L LE LDL NNL+ + L L L+ LNL N +IP+E+ +
Sbjct: 505 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGF-DEIPVEVFKD 563
Query: 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF-EEMHGLLHIDISY 526
L L +DL N L +S SL+ LNL N ++ + + F L +D+ +
Sbjct: 564 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 623
Query: 527 NKLE 530
N +
Sbjct: 624 NPFD 627
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC-RMESL 495
VP+ L + + + LNL+HN+L + L+ LD+ N + K+ +C ++ L
Sbjct: 24 VPDDLPTNITV--LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-KLEPELCQKLPML 80
Query: 496 EKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
+ LNL +N LS L + F L + + N ++
Sbjct: 81 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ 115
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 112/281 (39%), Gaps = 45/281 (16%)
Query: 291 GTVPK----SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNN-----SFFGEI 341
++PK SF+ L L L + N + G S F NL ++ LSN+ + E
Sbjct: 320 ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET 379
Query: 342 LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQ----LGNI- 396
P L +L+++ N IS L+ LDL N I E+ Q L NI
Sbjct: 380 FVSLAHSP-LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIF 438
Query: 397 -IYLNR---LSLSGNKLS------------------GCIPRELGSLINLEYLDLSANNLS 434
IYL+ L L+ N + P L NL LDLS NN++
Sbjct: 439 EIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 498
Query: 435 NFVPESLGSLVKLYYLNLSHNKLSQQI-------PIE-LDNLIHLSELDLSHNFLGEKIS 486
N + L L KL L+L HN L++ PI L L HL L+L N E
Sbjct: 499 NINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPV 558
Query: 487 SRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527
+ L+ ++L NNL+ L F L +++ N
Sbjct: 559 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 599
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 93
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 94 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 147
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ GT Y+ PE +
Sbjct: 148 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 261
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 262 PDI-PEKDLQDVLKC---CLKRDPKQR 284
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 637 TNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
T +F+ IG G GSV++ K G I+A+K+ PL G S ++ L E+ A +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVL 67
Query: 696 -RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADA 753
+H ++V+++ + H I EY GSL D I N + +++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 754 LFYLHNNCFPPIVHRDISSKNVLL 777
L Y+H+ +VH DI N+ +
Sbjct: 128 LRYIHSMS---LVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 637 TNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
T +F+ IG G GSV++ K G I+A+K+ PL G S ++ L E+ A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVL 65
Query: 696 -RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADA 753
+H ++V+++ + H I EY GSL D I N + +++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLL 777
L Y+H+ +VH DI N+ +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 144/345 (41%), Gaps = 26/345 (7%)
Query: 289 FRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRC 348
F +FR T + +L L +L G S G +L + L+ NSF +
Sbjct: 265 FSDLSSSTFRCFTRVQELDLTAAHLNGLPSGIEG-MNSLKKLVLNANSFDQLCQINAASF 323
Query: 349 PQLSLLDVSINNISGSIPLEIGESLQ-LQYLDLSSNYIVGE--IPTQLGNIIYLNRLSLS 405
P L L + N + E L+ LQ LDLS + I QL N+ +L L+LS
Sbjct: 324 PSLRDLYIKGNMRKLDLGTRCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLS 383
Query: 406 GNKLSGCIPRELGSLINLEYLDLSANNLSNFVPES-LGSLVKLYYLNLSHNKLSQQIPIE 464
N+ G + LE LD++ +L P S +L L LNLSH L
Sbjct: 384 YNEPLGLEDQAFKECPQLELLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHL 443
Query: 465 LDNLIHLSELDLSHNFLGEKISSRICRME---SLEKLNLSYNNLSGLIPRCFEEMHGLLH 521
L L L L+L N + S+ ++ SLE L LS NL + + F + + H
Sbjct: 444 LAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNH 503
Query: 522 IDISYNKLEGQIPNSTTFRDAPLEALQGNKGLY-----GDIRGFPSCMSYKKASRKIWIV 576
+D+S+N L G ++AL KGLY +IR P + + + I +
Sbjct: 504 LDLSHNSLTGD----------SMDALSHLKGLYLNMASNNIRIIPPHLLPALSQQSIINL 553
Query: 577 IVFPLLGMVALFIALTGFFFIFHQRKNDSQTQQSSFGNTPGLRSV 621
PL + +T + H+ ++ +++++ N P LR V
Sbjct: 554 SHNPLDCTCSNIHFITWYKENLHKLED---SEETTCANPPSLRGV 595
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 637 TNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI 695
T +F+ IG G GSV++ K G I+A+K+ PL G S ++ L E+ A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--SVDEQNALREVYAHAVL 65
Query: 696 -RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADA 753
+H ++V+++ + H I EY GSL D I N + +++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 754 LFYLHNNCFPPIVHRDISSKNVLL 777
L Y+H+ +VH DI N+ +
Sbjct: 126 LRYIHSMS---LVHMDIKPSNIFI 146
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 327 LTFIDLSNNSFFGEILSDWGRCPQ------LSLLDVSIN----NISGSIPLEIGESLQLQ 376
L+F L+ NS + + DWG+C L +LDVS N +I+G+ I +S
Sbjct: 176 LSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFS 235
Query: 377 YLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNF 436
+ +++I+G + N N +G + R ++ +LDLS + +
Sbjct: 236 LI--LAHHIMG------AGFGFHNIKDPDQNTFAG-LARS-----SVRHLDLSHGFVFSL 281
Query: 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 496
+L L LNL++NK+++ L +L L+LS+N LGE SS + +
Sbjct: 282 NSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVA 341
Query: 497 KLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKL 529
++L N+++ + + F+ + L +D+ N L
Sbjct: 342 YIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 49/260 (18%)
Query: 319 ETFGTYPNLTFIDLSNNSFF------------------------GEILSD--WGRCPQLS 352
E F PNL +DL ++ + +L D + L+
Sbjct: 67 EAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126
Query: 353 LLDVSINNI-SGSIPLEIGESLQLQYLDLSSN--YIVGEIPTQLGNIIYLNRLSLSGNKL 409
LD+S N I S + G+ L+ +D SSN ++V E + L+ SL+ N L
Sbjct: 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSL 186
Query: 410 SGCIPRELGSLIN------LEYLDLSAN--------NLSNFVPESLG-SLVKLYYLNLS- 453
+ + G +N LE LD+S N N SN + +S SL+ +++ +
Sbjct: 187 YSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAG 246
Query: 454 ---HN-KLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLI 509
HN K Q + LDLSH F+ S ++ L+ LNL+YN ++ +
Sbjct: 247 FGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIA 306
Query: 510 PRCFEEMHGLLHIDISYNKL 529
F + L +++SYN L
Sbjct: 307 DEAFYGLDNLQVLNLSYNLL 326
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 118/287 (41%), Gaps = 42/287 (14%)
Query: 295 KSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILS-DWGRCPQLSL 353
+ F L DL L L N + E F NL ++LS N GE+ S ++ P+++
Sbjct: 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYN-LLGELYSSNFYGLPKVAY 342
Query: 354 LDVSINNISGSIPLEIGESLQLQYLDLSSN-----YIVGEIPTQL--GNIIYL------- 399
+D+ N+I+ +LQ LDL N + + IP GN +
Sbjct: 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLT 402
Query: 400 -NRLSLSGNKLSGC-IPRELGSLINLEYLDLSANNLSNF----VPESLGSLVKLYYLNLS 453
N + LS N+L I L + +L+ L L+ N S+ P SL +L+ L
Sbjct: 403 ANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLF---LG 459
Query: 454 HNKLSQQIPIEL-----DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 508
N L EL + L HL L L+HN+L + +L L+L+ N L+ L
Sbjct: 460 ENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVL 519
Query: 509 ----IPRCFEEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNK 551
+P E + DIS N+L PN F + + NK
Sbjct: 520 SHNDLPANLEIL------DISRNQLLA--PNPDVFVSLSVLDITHNK 558
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 115/481 (23%), Positives = 180/481 (37%), Gaps = 102/481 (21%)
Query: 70 ISPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGI-IPPQ 128
+ P A+ G+F R+ L+ + L + F + L LDL N++ + + P
Sbjct: 88 LHPDAFQGLFHLFELRLYFCGLS----DAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPS 143
Query: 129 ISNLSNLEYLDFSANKLF-----------GQIPSGIGLLTHLTVLHISRNWLSGSIPHEV 177
L++L+ +DFS+N++F G+ S L + +S +W P
Sbjct: 144 FGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRN 203
Query: 178 GQLTVL----NQLALD-----SNFLNGSIPRSLGNLTHVV--------ILYLYNNSFFGS 220
L +L N +D SN ++ S SL H++ I N+F G
Sbjct: 204 MVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263
Query: 221 IPQEIGN------------------LKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYH 262
+ + LK L L L N+++ + L NL+ L L +
Sbjct: 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323
Query: 263 NELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTG-----NI 317
N L + H ++F+ L L L L N LT +I
Sbjct: 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSI 383
Query: 318 SETF------GTYP--NLT--FIDLSNNSFFG-EILSDWGRCPQLSLLDVSINNISG--- 363
+ F T P NLT I LS N +IL R P L +L ++ N S
Sbjct: 384 PDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSG 443
Query: 364 -SIPLE--------IGESL------------------QLQYLDLSSNYIVGEIPTQLGNI 396
P E +GE++ LQ L L+ NY+ P ++
Sbjct: 444 DQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHL 503
Query: 397 IYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNK 456
L LSL+ N+L+ +L + NLE LD+S N L P+ V L L+++HNK
Sbjct: 504 TALRGLSLNSNRLTVLSHNDLPA--NLEILDISRNQLLAPNPD---VFVSLSVLDITHNK 558
Query: 457 L 457
Sbjct: 559 F 559
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 174/426 (40%), Gaps = 35/426 (8%)
Query: 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163
+F+ + L LD+ N + + P L L+ L+ N+L T+LT LH
Sbjct: 44 NFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103
Query: 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQ 223
+ N + + + L L L N L+ + + L ++ L L NN +
Sbjct: 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163
Query: 224 EIGNL--KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXX 281
E+ SL LEL NQ+ P + L LFL + +L + +++
Sbjct: 164 ELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANT- 222
Query: 282 XXXXXXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEI 341
S RNL+ L +Q T N + + NLT +DLS N+
Sbjct: 223 --------------SIRNLS----LSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264
Query: 342 LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIP----TQLGNII 397
+ PQL + NNI + ++YL+L ++ I ++ +
Sbjct: 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS 324
Query: 398 Y-----LNRLSLSGNKLSGCIPRELGSLINLEYLDLSAN--NLSNFVPESLGSLVK--LY 448
+ L L++ N + G LINL+YL LS + +L E+ SL L+
Sbjct: 325 FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLH 384
Query: 449 YLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR-MESLEKLNLSYNNLSG 507
LNL+ NK+S+ L HL LDL N +G++++ + R +E++ ++ LSYN
Sbjct: 385 ILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ 444
Query: 508 LIPRCF 513
L F
Sbjct: 445 LTRNSF 450
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 151/387 (39%), Gaps = 66/387 (17%)
Query: 179 QLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCI 238
+ TV +++A S+ +P L T++ +L L +N L L++
Sbjct: 1 KCTVSHEVADCSHLKLTQVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGF 58
Query: 239 NQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKSFR 298
N +S P L L+ L L HNELS + K+F
Sbjct: 59 NTISKLEPELCQKLPMLKVLNLQHNELSQL------------------------SDKTFA 94
Query: 299 NLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSI 358
T+L +L L N + + F NL +DLS+N L + L L +S
Sbjct: 95 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSN 154
Query: 359 NNISG--SIPLEIGESLQLQYLDLSSNYIVGEIP----------------TQLGNIIY-- 398
N I S L+I + L+ L+LSSN I P QLG +
Sbjct: 155 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 214
Query: 399 ---------LNRLSLSGNKLSGCIPRELGSL--INLEYLDLSANNLSNFVPESLGSLVKL 447
+ LSLS ++LS L NL LDLS NNL+ +S L +L
Sbjct: 215 LCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQL 274
Query: 448 YYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKIS-SRICRMES--------LEKL 498
Y L +N + L L ++ L+L +F + IS + + +++ LE L
Sbjct: 275 EYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHL 334
Query: 499 NLSYNNLSGLIPRCFEEMHGLLHIDIS 525
N+ N++ G+ F + L ++ +S
Sbjct: 335 NMEDNDIPGIKSNMFTGLINLKYLSLS 361
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)
Query: 417 LGSLINLEYLDLSANNLSNFVPES--------LGSLVKLYYLNLSHNKLSQQIPIEL-DN 467
L L LE LDL NNL+ + L L L+ LNL N +IP+E+ +
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGF-DEIPVEVFKD 558
Query: 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF-EEMHGLLHIDISY 526
L L +DL N L +S SL+ LNL N ++ + + F L +D+ +
Sbjct: 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRF 618
Query: 527 NKLE 530
N +
Sbjct: 619 NPFD 622
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRIC-RMESL 495
VP+ L + + + LNL+HN+L + L+ LD+ N + K+ +C ++ L
Sbjct: 19 VPDDLPTNITV--LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTIS-KLEPELCQKLPML 75
Query: 496 EKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
+ LNL +N LS L + F L + + N ++
Sbjct: 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQ 110
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 112/281 (39%), Gaps = 45/281 (16%)
Query: 291 GTVPK----SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNN-----SFFGEI 341
++PK SF+ L L L + N + G S F NL ++ LSN+ + E
Sbjct: 315 ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET 374
Query: 342 LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQ----LGNI- 396
P L +L+++ N IS L+ LDL N I E+ Q L NI
Sbjct: 375 FVSLAHSP-LHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIF 433
Query: 397 -IYLNR---LSLSGNKLS------------------GCIPRELGSLINLEYLDLSANNLS 434
IYL+ L L+ N + P L NL LDLS NN++
Sbjct: 434 EIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIA 493
Query: 435 NFVPESLGSLVKLYYLNLSHNKLSQQI-------PIE-LDNLIHLSELDLSHNFLGEKIS 486
N + L L KL L+L HN L++ PI L L HL L+L N E
Sbjct: 494 NINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPV 553
Query: 487 SRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527
+ L+ ++L NNL+ L F L +++ N
Sbjct: 554 EVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + + W+ L GT Y+APE+
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GATWT-LCGTPEYLAPEI 230
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 73
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 74 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 127
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ GT Y+ PE +
Sbjct: 128 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 241
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 242 PDI-PEKDLQDVLKC---CLKRDPKQR 264
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G+G +G VY+A + E A+K+ L E + E+ L E++HRNI++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP- 763
H +I+EY E+ L K + + + VIK L N C
Sbjct: 100 SVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVS-------MRVIKSFLYQLINGVNFCHSR 151
Query: 764 PIVHRDISSKNVLLDLGYEAH-----VSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LAY 817
+HRD+ +N+LL + + + DFG+A+ ++ T Y PE L
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 818 TLKVTEKCDVYSFGVLALEVI 838
+ + D++S + E++
Sbjct: 212 SRHYSTSVDIWSIACIWAEML 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 646 IGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEE-----FLNEIQALTEIRHRN 699
+G+G + +VY+ K + + A+K E+ + EE + E+ L +++H N
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALK--------EIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRL--NVIKGVADALFYL 757
IV + K +++EYL+ L + L + + + + +++G+A Y
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLA----YC 116
Query: 758 HNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE-LA 816
H ++HRD+ +N+L++ E ++DFG+A+ + + + T Y P+ L
Sbjct: 117 HRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 817 YTLKVTEKCDVYSFGVLALEVIKGK 841
+ + + D++ G + E+ G+
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 12/153 (7%)
Query: 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSL-DKILCNDASAKELGWTQRLNVIKGVADAL 754
+H NI+ K+ +++ E + G L DKIL K + V+ + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL----RQKFFSEREASAVLFTITKTV 129
Query: 755 FYLHNNCFPPIVHRDISSKNVL-LDLG---YEAHVSDFGIAKFLNPDSSNWSELAGTHGY 810
YLH +VHRD+ N+L +D + DFG AK L ++ T +
Sbjct: 130 EYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANF 186
Query: 811 VAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843
VAPE+ CD++S GVL + G P
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 392 QLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLN 451
+L N+ YL L+GN+L L NL+ L L N L + L L YL
Sbjct: 83 ELTNLTYL---ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 452 LSHNKLSQQIPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 510
L HN+L Q +P + D L +L+ LDL +N L ++ L++L+L+ N L +
Sbjct: 140 LYHNQL-QSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPD 198
Query: 511 RCFEEMHGLLHI 522
F+ + L HI
Sbjct: 199 GVFDRLTSLTHI 210
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 129 ISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLA 187
I L N+ YL NKL S + LT+LT L ++ N L S+P+ V +LT L +L
Sbjct: 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELV 115
Query: 188 LDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEI-GNLKSLFDLELCINQLSGAIP 246
L N L LT++ LYLY+N S+P+ + L +L L+L NQL
Sbjct: 116 LVENQLQSLPDGVFDKLTNLTYLYLYHNQ-LQSLPKGVFDKLTNLTRLDLDNNQLQSLPE 174
Query: 247 LSISNLTNLRFLFLYHNELSGI 268
LT L+ L L N+L +
Sbjct: 175 GVFDKLTQLKQLSLNDNQLKSV 196
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 7/139 (5%)
Query: 393 LGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNL 452
L N+ YL +L GNKL L L NL YL L+ N L + L L L L
Sbjct: 62 LPNVRYL---ALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVL 116
Query: 453 SHNKLSQQIPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPR 511
N+L Q +P + D L +L+ L L HN L ++ +L +L+L N L L
Sbjct: 117 VENQL-QSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEG 175
Query: 512 CFEEMHGLLHIDISYNKLE 530
F+++ L + ++ N+L+
Sbjct: 176 VFDKLTQLKQLSLNDNQLK 194
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 6/154 (3%)
Query: 186 LALDSNFLNG-SIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGA 244
LAL N L+ S + L NLT++++ S + ++ NLK L +E NQL
Sbjct: 68 LALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE---NQLQSL 124
Query: 245 IPLSISNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKS-FRNLTDL 303
LTNL +L+LYHN+L + P+ + + ++P+ F LT L
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQSL-PKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQL 183
Query: 304 VKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSF 337
+L LN N L F +LT I L NN +
Sbjct: 184 KQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNNPW 217
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 108 FPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVLHISR 166
P++ YL L N+L I + L+NL YL + N+L +P+G+ LT+L L +
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQL-QSLPNGVFDKLTNLKELVLVE 118
Query: 167 NWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSL-GNLTHVVILYLYNNSFFGSIPQE 224
N L S+P V +LT L L L N L S+P+ + LT++ L L NN S+P+
Sbjct: 119 NQLQ-SLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLDLDNNQL-QSLPEG 175
Query: 225 I-GNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHN 263
+ L L L L NQL LT+L ++L +N
Sbjct: 176 VFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNN 215
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Query: 90 NLTSISLNGTLLEF----SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL 145
NLT + L G L+ F +L L L N+L + L+NL YL N+L
Sbjct: 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQL 145
Query: 146 FGQIPSGI-GLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSL-G 202
+P G+ LT+LT L + N L S+P V +LT L QL+L+ N L S+P +
Sbjct: 146 -QSLPKGVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKLTQLKQLSLNDNQLK-SVPDGVFD 202
Query: 203 NLTHVVILYLYNNSF 217
LT + ++L NN +
Sbjct: 203 RLTSLTHIWLLNNPW 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
+++RD+ +N+L+D V+DFG AK + W+ L GT Y+APE+ + +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GVL E+ G P
Sbjct: 205 VDWWALGVLIYEMAAGYPP 223
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W+ L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWT-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 74
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 75 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 128
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ GT Y+ PE +
Sbjct: 129 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLD--SRLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 242
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 243 PDI-PEKDLQDVLKC---CLKRDPKQR 265
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
+HRD++++N+LL + DFG+A+ + +PD + ++APE + T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 824 KCDVYSFGVLALEV 837
+ DV+SFGVL E+
Sbjct: 275 QSDVWSFGVLLWEI 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
+HRD++++N+LL + DFG+A+ + +PD + ++APE + T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 824 KCDVYSFGVLALEV 837
+ DV+SFGVL E+
Sbjct: 280 QSDVWSFGVLLWEI 293
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
+HRD++++N+LL + DFG+A+ + +PD + ++APE + T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 824 KCDVYSFGVLALEV 837
+ DV+SFGVL E+
Sbjct: 273 QSDVWSFGVLLWEI 286
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 121
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 122 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 175
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ GT Y+ PE +
Sbjct: 176 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 289
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 290 PDI-PEKDLQDVLKC---CLKRDPKQR 312
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 766 VHRDISSKNVLLDLGYEAHVSDFGIAK--FLNPDSSNWSELAGTHGYVAPELAYTLKVTE 823
+HRD++++N+LL + DFG+A+ + +PD + ++APE + T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 824 KCDVYSFGVLALEV 837
+ DV+SFGVL E+
Sbjct: 282 QSDVWSFGVLLWEI 295
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 151 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 204
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
+++RD+ +N+L+D V+DFG AK + W L GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
+++RD+ +N+L+D V+DFG AK + W L GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GVL E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LXGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 230
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG+AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 89 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S +E T YVAPE+ K + CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 204 GVIMYILLCGYPP 216
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
+++RD+ +N+L+D V+DFG AK + W L GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GVL E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 143 YLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 196
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 646 IGKGGHGSVYRAK--VPSGEIFAVKKFHSPLPGE-MSFQQEEFLNEIQALTEIRHRNIVK 702
IG+G +G V++A+ G A+K+ E M + ++ L H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 703 FYGFCSHPKHS-----FIIYEYLE---SGSLDKILCNDASAKELGWTQRLNVIKGVADAL 754
+ C+ + +++E+++ + LDK+ E +++G L
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKDMMFQLLRG----L 133
Query: 755 FYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814
+LH++ +VHRD+ +N+L+ + ++DFG+A+ + + + + T Y APE
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPE 189
Query: 815 LAYTLKVTEKCDVYSFGVLALEVIKGK 841
+ D++S G + E+ + K
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 121
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 122 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 175
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ GT Y+ PE +
Sbjct: 176 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 289
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 290 PDI-PEKDLQDVLKC---CLKRDPKQR 312
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 184/451 (40%), Gaps = 79/451 (17%)
Query: 117 YNNELFGI--IPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISR---NWLSG 171
YN E G+ IP + N + E+L+FS N L L +LT L ++R NW+
Sbjct: 14 YNCENLGLSEIPDTLPNTT--EFLEFSFNFLPTIHNRTFSRLMNLTFLDLTRCQINWIHE 71
Query: 172 SIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSL 231
QL+ L LT ++++ S G P+ +LK L
Sbjct: 72 DTFQSHHQLSTLV-------------------LTGNPLIFMAETSLNG--PK---SLKHL 107
Query: 232 FDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGI-IPQEI-GXXXXXXXXXXXXXHF 289
F ++ I+ L IP + NL NL L+L N +S I P++ H+
Sbjct: 108 FLIQTGISNLE-FIP--VHNLENLESLYLGSNHISSIKFPKDFPARNLKVLDFQNNAIHY 164
Query: 290 RGTVPKSFRNLTDLVKLRLNQNYLTGN---------------ISETFGTYPNLTFI--DL 332
+ R+L + L LN N GN S FG PNL+ I L
Sbjct: 165 ISR--EDMRSLEQAINLSLNFN---GNNVKGIELGAFDSTIFQSLNFGGTPNLSVIFNGL 219
Query: 333 SNNSFFGEILSDW-GRCPQLSLLDVSINNISGSIPLEIGESLQLQ---YLDLSSNYIVGE 388
N++ S W G + D+S + G + + ESL LQ + D+SS
Sbjct: 220 QNST----TQSLWLGTFEDIDDEDISSAMLKGLCEMSV-ESLNLQEHRFSDISS------ 268
Query: 389 IPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLY 448
T L L L+ L G +P + L L+ L LS N+ S + L
Sbjct: 269 --TTFQCFTQLQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLT 325
Query: 449 YLNLSHNKLSQQIPIE-LDNLIHLSELDLSHNFL--GEKISSRICRMESLEKLNLSYNNL 505
+L + N + + L+ L +L LDLSHN + + S ++ + L+ LNLS+N
Sbjct: 326 HLYIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEP 385
Query: 506 SGLIPRCFEEMHGLLHIDISYNKLEGQIPNS 536
GL + F+E L +D+++ +L P S
Sbjct: 386 LGLQSQAFKECPQLELLDLAFTRLHINAPQS 416
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 161/386 (41%), Gaps = 60/386 (15%)
Query: 75 WSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSN 134
W G F E + +++S L G L E S S L+L + I +
Sbjct: 228 WLGTF----EDIDDEDISSAMLKG-LCEMSVES------LNLQEHRFSDISSTTFQCFTQ 276
Query: 135 LEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLN 194
L+ LD +A L G +PSG+ L L L +S N ++ Q++ N +L ++
Sbjct: 277 LQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFD-----QLCQISAANFPSLTHLYIR 330
Query: 195 GSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTN 254
G++ + H+ + L +++GNL++L DL + S L + NL++
Sbjct: 331 GNVKK-----LHLGVGCL----------EKLGNLQTL-DLSHNDIEASDCCSLQLKNLSH 374
Query: 255 LRFLFLYHNELSGIIPQEIGXXXXXXXXXXXXXHFRGTVPKS-FRNLTDLVKLRLNQNYL 313
L+ L L HNE G+ Q P+S F+NL L L L +L
Sbjct: 375 LQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFL 434
Query: 314 TGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESL 373
+ P L ++L N F G + +LL GS+ + I S
Sbjct: 435 DTSNQHLLAGLPVLRHLNLKGNHF------QDGTITKTNLLQTV-----GSLEVLILSSC 483
Query: 374 QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLE--YLDLSAN 431
L +D + + +G+ ++ + LS N L+ + SL +L+ YL+L+AN
Sbjct: 484 GLLSIDQQAFHSLGK----------MSHVDLSHNSLTC---DSIDSLSHLKGIYLNLAAN 530
Query: 432 NLSNFVPESLGSLVKLYYLNLSHNKL 457
+++ P L L + +NLSHN L
Sbjct: 531 SINIISPRLLPILSQQSTINLSHNPL 556
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 37/228 (16%)
Query: 288 HFRGTVPK------SFRNLTDLVKLRLNQNYLTGN--ISETFGTYPNLTFIDLSNNSFFG 339
+ RG V K L +L L L+ N + + S +L ++LS+N G
Sbjct: 328 YIRGNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLG 387
Query: 340 EILSDWGRCPQLSLLDVSINNISGSIP------LEIGESLQLQY--LDLSSNYIVGEIPT 391
+ CPQL LLD++ + + P L + L L Y LD S+ +++ +P
Sbjct: 388 LQSQAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPV 447
Query: 392 -----------QLGNIIYLNRLSLSGNK----LSGC-----IPRELGSLINLEYLDLSAN 431
Q G I N L G+ LS C + SL + ++DLS N
Sbjct: 448 LRHLNLKGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHN 507
Query: 432 NLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 479
+L+ +SL L K YLNL+ N ++ P L L S ++LSHN
Sbjct: 508 SLTCDSIDSLSHL-KGIYLNLAANSINIISPRLLPILSQQSTINLSHN 554
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 6/161 (3%)
Query: 375 LQYLDLSSNYIVGE--IPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANN 432
LQ LDLS N I QL N+ +L L+LS N+ G + LE LDL+
Sbjct: 349 LQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELLDLAFTR 408
Query: 433 LSNFVPES-LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR 491
L P+S +L L LNL++ L L L L L+L N + ++
Sbjct: 409 LHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRHLNLKGNHFQDGTITKTNL 468
Query: 492 ME---SLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKL 529
++ SLE L LS L + + F + + H+D+S+N L
Sbjct: 469 LQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSL 509
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 633 IISATNDFNAEHCIGKGGHGSVYRAK--VPSGEIFAVKKFHSPLPGE-MSFQQEEFLNEI 689
+ A + IG+G +G V++A+ G A+K+ E M + +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 690 QALTEIRHRNIVKFYGFCSHPKHS-----FIIYEYLE---SGSLDKILCNDASAKELGWT 741
+ L H N+V+ + C+ + +++E+++ + LDK+ E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKD 124
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+++G L +LH++ +VHRD+ +N+L+ + ++DFG+A+ + +
Sbjct: 125 MMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-L 176
Query: 802 SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGK 841
+ + T Y APE+ D++S G + E+ + K
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG+AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 93
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 94 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 147
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD GT Y+ PE +
Sbjct: 148 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 261
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 262 PDI-PEKDLQDVLKC---CLKRDPKQR 284
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 97/220 (44%), Gaps = 20/220 (9%)
Query: 633 IISATNDFNAEHCIGKGGHGSVYRAK--VPSGEIFAVKKFHSPLPGE-MSFQQEEFLNEI 689
+ A + IG+G +G V++A+ G A+K+ E M + +
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 690 QALTEIRHRNIVKFYGFCSHPKHS-----FIIYEYLE---SGSLDKILCNDASAKELGWT 741
+ L H N+V+ + C+ + +++E+++ + LDK+ E
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKV-PEPGVPTETIKD 124
Query: 742 QRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW 801
+++G L +LH++ +VHRD+ +N+L+ + ++DFG+A+ + +
Sbjct: 125 MMFQLLRG----LDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-L 176
Query: 802 SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGK 841
+ + T Y APE+ D++S G + E+ + K
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 378 LDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFV 437
LDLS N + I + +L RL L+GN L+ +P E+ +L NL LDLS N L++ +
Sbjct: 229 LDLS-NLQIFNISANIFKYDFLTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLTS-L 285
Query: 438 PESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK 484
P LGS +L Y N ++ +P E NL +L L + N L ++
Sbjct: 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQ 331
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 90 NLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQI 149
NL +++ + ++ F L L L N L + P +I NLSNL LD S N+L +
Sbjct: 233 NLQIFNISANIFKYDF-----LTRLYLNGNSLTEL-PAEIKNLSNLRVLDLSHNRL-TSL 285
Query: 150 PSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHV-V 208
P+ +G L + N ++ ++P E G L L L ++ N L + L + +
Sbjct: 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGL 344
Query: 209 ILYLYNNSFFGSIPQE 224
I YL +N +P E
Sbjct: 345 IFYLRDNRPEIPLPHE 360
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 365 IPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLE 424
+P EI L+ LDLS N + +P +LG+ L N ++ +P E G+L NL+
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ 319
Query: 425 YLDLSANNL 433
+L + N L
Sbjct: 320 FLGVEGNPL 328
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 419 SLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 478
L NL+ ++SAN L +LY L+ N L++ +P E+ NL +L LDLSH
Sbjct: 230 DLSNLQIFNISANIFK------YDFLTRLY---LNGNSLTE-LPAEIKNLSNLRVLDLSH 279
Query: 479 NFLGEKISSRICRMESLEKLNLSY--NNLSGLIPRCFEEMHGLLHIDISYNKLEGQ 532
N +++S + S +L Y +N+ +P F + L + + N LE Q
Sbjct: 280 N----RLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQ 331
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 210 LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGII 269
LYL NS +P EI NL +L L+L N+L+ ++P + + L++ + + N ++ +
Sbjct: 252 LYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TL 308
Query: 270 PQEIG 274
P E G
Sbjct: 309 PWEFG 313
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 210
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEK 824
+++RD+ +N+++D V+DFG AK + W L GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 825 CDVYSFGVLALEVIKGKHP 843
D ++ GVL E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+++D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL ++ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 406 GNKLSGCIPRELGSL-----INLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQ 460
G K C + L S+ + E LDL + L+ + L KL +LNL +N+L
Sbjct: 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74
Query: 461 IPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLL 520
D+L L L L++N L + L+KL L N L L F+ + L
Sbjct: 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK 134
Query: 521 HIDISYNKLEGQIP 534
+ ++ N+L+ IP
Sbjct: 135 ELRLNTNQLQ-SIP 147
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 401 RLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQ 460
+L L L+ L L +L+L N L L +L L L++N+L+
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS- 97
Query: 461 IPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGL 519
+P+ + D+L L +L L N L S R+ L++L L+ N L + F+++ L
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157
Query: 520 LHIDISYNKLEGQIPNSTTFRDAPLEAL 547
+ +S N+L+ +P+ R L+ +
Sbjct: 158 QTLSLSTNQLQ-SVPHGAFDRLGKLQTI 184
Score = 37.7 bits (86), Expect = 0.028, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 89 INLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQ 148
++L S L TL + +F L +L+L N+L + +L+ L L + N+L
Sbjct: 40 LDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-AS 97
Query: 149 IPSGI-GLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSLGNLTH 206
+P G+ LT L L++ N L S+P V +LT L +L L++N L + LT+
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 207 VVILYLYNNSFFGSIPQ----EIGNLKSL------FDLELC 237
+ L L N S+P +G L+++ FD C
Sbjct: 157 LQTLSLSTNQ-LQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196
Score = 37.4 bits (85), Expect = 0.037, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 6/174 (3%)
Query: 357 SINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRE 416
S++++ IP + + LDL S + + L L+L N+L
Sbjct: 25 SLDSVPSGIPADT------EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 417 LGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 476
L L L L+ N L++ L +L L L N+L D L L EL L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 477 SHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
+ N L + ++ +L+ L+LS N L + F+ + L I + N+ +
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 37.0 bits (84), Expect = 0.055, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 133 SNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNF 192
++ E LD + L + LT LT L++ N L LT L L L +N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 193 LNGSIPRSL-GNLTHVVILYLYNNSFFGSIPQEI-GNLKSLFDLELCINQLSGAIPLSIS 250
L S+P + +LT + LYL N S+P + L L +L L NQL +
Sbjct: 95 L-ASLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFD 152
Query: 251 NLTNLRFLFLYHNELSGI 268
LTNL+ L L N+L +
Sbjct: 153 KLTNLQTLSLSTNQLQSV 170
Score = 34.3 bits (77), Expect = 0.28, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 58/163 (35%), Gaps = 26/163 (15%)
Query: 296 SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355
+FR LT L L L+ N L + F L + L+NN
Sbjct: 54 TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL------------------ 95
Query: 356 VSINNISGSIPLEIGESL-QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP 414
S+PL + + L QL L L N + + L L L+ N+L
Sbjct: 96 -------ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148
Query: 415 RELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKL 457
L NL+ L LS N L + + L KL + L N+
Sbjct: 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 227 NLKSLFDLELCINQLSGAIPLSI-SNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXX 285
+L L L L NQL+ ++PL + +LT L L+L N+L + P +
Sbjct: 81 DLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSL-PSGV------------ 126
Query: 286 XXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSF 337
F LT L +LRLN N L + F NL + LS N
Sbjct: 127 -----------FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 6/134 (4%)
Query: 406 GNKLSGCIPRELGSL-----INLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQ 460
G K C + L S+ + E LDL + L+ + L KL +LNL +N+L
Sbjct: 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74
Query: 461 IPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLL 520
D+L L L L++N L + L+KL L N L L F+ + L
Sbjct: 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLK 134
Query: 521 HIDISYNKLEGQIP 534
+ ++ N+L+ IP
Sbjct: 135 ELRLNTNQLQ-SIP 147
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 3/148 (2%)
Query: 401 RLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQ 460
+L L L+ L L +L+L N L L +L L L++N+L+
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLAS- 97
Query: 461 IPIEL-DNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGL 519
+P+ + D+L L +L L N L S R+ L++L L+ N L + F+++ L
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNL 157
Query: 520 LHIDISYNKLEGQIPNSTTFRDAPLEAL 547
+ +S N+L+ +P+ R L+ +
Sbjct: 158 QTLSLSTNQLQ-SVPHGAFDRLGKLQTI 184
Score = 37.7 bits (86), Expect = 0.030, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 16/161 (9%)
Query: 89 INLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQ 148
++L S L TL + +F L +L+L N+L + +L+ L L + N+L
Sbjct: 40 LDLQSTGL-ATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL-AS 97
Query: 149 IPSGI-GLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSLGNLTH 206
+P G+ LT L L++ N L S+P V +LT L +L L++N L + LT+
Sbjct: 98 LPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTN 156
Query: 207 VVILYLYNNSFFGSIPQ----EIGNLKSL------FDLELC 237
+ L L N S+P +G L+++ FD C
Sbjct: 157 LQTLSLSTNQ-LQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196
Score = 37.4 bits (85), Expect = 0.039, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 6/174 (3%)
Query: 357 SINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRE 416
S++++ IP + + LDL S + + L L+L N+L
Sbjct: 25 SLDSVPSGIPADT------EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGV 78
Query: 417 LGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 476
L L L L+ N L++ L +L L L N+L D L L EL L
Sbjct: 79 FDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138
Query: 477 SHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
+ N L + ++ +L+ L+LS N L + F+ + L I + N+ +
Sbjct: 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
Score = 36.6 bits (83), Expect = 0.058, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 133 SNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNF 192
++ E LD + L + LT LT L++ N L LT L L L +N
Sbjct: 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 193 LNGSIPRSL-GNLTHVVILYLYNNSFFGSIPQEI-GNLKSLFDLELCINQLSGAIPLSIS 250
L S+P + +LT + LYL N S+P + L L +L L NQL +
Sbjct: 95 L-ASLPLGVFDHLTQLDKLYLGGNQL-KSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFD 152
Query: 251 NLTNLRFLFLYHNELSGI 268
LTNL+ L L N+L +
Sbjct: 153 KLTNLQTLSLSTNQLQSV 170
Score = 34.3 bits (77), Expect = 0.30, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 58/163 (35%), Gaps = 26/163 (15%)
Query: 296 SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355
+FR LT L L L+ N L + F L + L+NN
Sbjct: 54 TFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL------------------ 95
Query: 356 VSINNISGSIPLEIGESL-QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP 414
S+PL + + L QL L L N + + L L L+ N+L
Sbjct: 96 -------ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148
Query: 415 RELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKL 457
L NL+ L LS N L + + L KL + L N+
Sbjct: 149 GAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQF 191
Score = 30.0 bits (66), Expect = 5.5, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 26/112 (23%)
Query: 227 NLKSLFDLELCINQLSGAIPLSI-SNLTNLRFLFLYHNELSGIIPQEIGXXXXXXXXXXX 285
+L L L L NQL+ ++PL + +LT L L+L N+L + P +
Sbjct: 81 DLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSL-PSGV------------ 126
Query: 286 XXHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSF 337
F LT L +LRLN N L + F NL + LS N
Sbjct: 127 -----------FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVLHISRNW 168
YLDL N L + L++L L NKL +P+G+ LT LT L++S N
Sbjct: 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKL-QSLPNGVFNKLTSLTYLNLSTNQ 87
Query: 169 LSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSL-GNLTHVVILYLYNNSFFGSIPQEI- 225
L S+P+ V +LT L +LAL++N L S+P + LT + L LY N S+P +
Sbjct: 88 LQ-SLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQ-LKSVPDGVF 144
Query: 226 GNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIG 274
L SL + L N P +R+L + N+ SG++ G
Sbjct: 145 DRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNSAG 186
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 71/175 (40%), Gaps = 9/175 (5%)
Query: 363 GSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLIN 422
G + G Q YLDL +N + + L +L L GNKL L +
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77
Query: 423 LEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELDLSHNFL 481
L YL+LS N L + L +L L L+ N+L Q +P + D L L +L L N L
Sbjct: 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 482 GEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS 536
R+ SL+ + L N P G+ ++ NK G + NS
Sbjct: 137 KSVPDGVFDRLTSLQYIWLHDNPWDCTCP-------GIRYLSEWINKHSGVVRNS 184
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 8/123 (6%)
Query: 149 IPSGIGLLTHLTVLHISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSLGN-LTH 206
+P+GI T T L + N L S+P+ V +LT L QL L N L S+P + N LT
Sbjct: 22 VPTGIPAQT--TYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTS 77
Query: 207 VVILYLYNNSFFGSIPQEI-GNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNEL 265
+ L L N S+P + L L +L L NQL LT L+ L LY N+L
Sbjct: 78 LTYLNLSTNQL-QSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 266 SGI 268
+
Sbjct: 137 KSV 139
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLTHLTVLH 163
F L L L N+L + + L++L YL+ S N+L +P+G+ LT L L
Sbjct: 48 FDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQL-QSLPNGVFDKLTQLKELA 106
Query: 164 ISRNWLSGSIPHEV-GQLTVLNQLALDSNFLNGSIPRSL-GNLTHVVILYLYNNSFFGSI 221
++ N L S+P V +LT L L L N L S+P + LT + ++L++N + +
Sbjct: 107 LNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 164
Query: 222 P 222
P
Sbjct: 165 P 165
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 50/250 (20%)
Query: 629 VYEEIISATNDFNAEHCIGKGGHGSVYRA----KVPSGEIFAVKKFHSPLPGEMSFQQEE 684
+YE + +N F E IG+G SVY A +V E A+K +P +
Sbjct: 12 LYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL---IPTSHPIR--- 65
Query: 685 FLNEIQALTEIRHRNIVKFYGFC-SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQR 743
E+Q LT ++ V +C H I YLE S IL N S +E+
Sbjct: 66 IAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-NSLSFQEV-REYM 123
Query: 744 LNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAH-VSDFGIA----------- 791
LN+ K AL +H IVHRD+ N L + + + + DFG+A
Sbjct: 124 LNLFK----ALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176
Query: 792 KFLNPDSSNW-----------------SELAGTHGYVAPE-LAYTLKVTEKCDVYSFGVL 833
KF+ ++ + AGT G+ APE L T D++S GV+
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI 236
Query: 834 ALEVIKGKHP 843
L ++ G++P
Sbjct: 237 FLSLLSGRYP 246
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 357 SINNISGSI-PLEIGESL------QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKL 409
S NI S PL+I +S +LQ+LDLS I + +L+ L L+GN +
Sbjct: 28 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 87
Query: 410 SGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNL 468
P L +LE L L++ +G L+ L LN++HN + S ++P NL
Sbjct: 88 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNL 147
Query: 469 IHLSELDLSHNFL 481
+L +DLS+N++
Sbjct: 148 TNLVHVDLSYNYI 160
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 100 LLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHL 159
L +SFS+F L +LDL E+ I L +L L + N + P LT L
Sbjct: 42 LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSL 101
Query: 160 TVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVV 208
L L+ +GQL L +L + NF++ +P NLT++V
Sbjct: 102 ENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 151
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 186/471 (39%), Gaps = 67/471 (14%)
Query: 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWL 169
HL L L N + P S L++LE L KL IG L L L+++ N++
Sbjct: 76 HLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFI 135
Query: 170 -SGSIPHEVGQLTVLNQLALDSNFL-------------NGSIPRSLGNLTHVVILYLYNN 215
S +P LT L + L N++ N + SL +++ I ++ +
Sbjct: 136 HSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSL-DMSLNPIDFIQDQ 194
Query: 216 SFFGSIPQEI---GNLKSLFDLELCINQLSG----------------------AIPLSIS 250
+F G E+ GN S ++ C+ L+G +I +
Sbjct: 195 AFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLC 254
Query: 251 NLTNLRFLFLYHNELSG-IIPQEIGXXXXXXXXXXXXXHFRGTVPKSFR-NLTDLVKLRL 308
++T F Y N+ S I+ + VPK F+ +++ +L
Sbjct: 255 DVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL 314
Query: 309 NQNYLTGNISETFGTY--PNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIP 366
Q F T P L + L+ N G I P LS LD+S N +S S
Sbjct: 315 KQ----------FPTLDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGC 362
Query: 367 LEIGE--SLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLE 424
+ + L++LDLS N + +G + L L + L E + ++LE
Sbjct: 363 CSYSDLGTNSLRHLDLSFNGAIIMSANFMG-LEELQHLDFQHSTLKRVT--EFSAFLSLE 419
Query: 425 ---YLDLSANNLS-NFVPESLGSLVKLYYLNLSHNKLSQQ-IPIELDNLIHLSELDLSHN 479
YLD+S N +F LG L L L ++ N + N +L+ LDLS
Sbjct: 420 KLLYLDISYTNTKIDFDGIFLG-LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 478
Query: 480 FLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
L + + L+ LN+S+NNL L + +++ L +D S+N++E
Sbjct: 479 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 529
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 97 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 152
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 153 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 212 GVIMYILLCGYPP 224
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 8/133 (6%)
Query: 357 SINNISGSI-PLEIGESL------QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKL 409
S NI S PL+I +S +LQ+LDLS I + +L+ L L+GN +
Sbjct: 33 STKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPI 92
Query: 410 SGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNL 468
P L +LE L L++ +G L+ L LN++HN + S ++P NL
Sbjct: 93 QSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNL 152
Query: 469 IHLSELDLSHNFL 481
+L +DLS+N++
Sbjct: 153 TNLVHVDLSYNYI 165
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 100 LLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHL 159
L +SFS+F L +LDL E+ I L +L L + N + P LT L
Sbjct: 47 LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSL 106
Query: 160 TVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVV 208
L L+ +GQL L +L + NF++ +P NLT++V
Sbjct: 107 ENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLV 156
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 186/471 (39%), Gaps = 67/471 (14%)
Query: 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWL 169
HL L L N + P S L++LE L KL IG L L L+++ N++
Sbjct: 81 HLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFI 140
Query: 170 -SGSIPHEVGQLTVLNQLALDSNFL-------------NGSIPRSLGNLTHVVILYLYNN 215
S +P LT L + L N++ N + SL +++ I ++ +
Sbjct: 141 HSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSL-DMSLNPIDFIQDQ 199
Query: 216 SFFGSIPQEI---GNLKSLFDLELCINQLSG----------------------AIPLSIS 250
+F G E+ GN S ++ C+ L+G +I +
Sbjct: 200 AFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLC 259
Query: 251 NLTNLRFLFLYHNELSG-IIPQEIGXXXXXXXXXXXXXHFRGTVPKSFR-NLTDLVKLRL 308
++T F Y N+ S I+ + VPK F+ +++ +L
Sbjct: 260 DVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL 319
Query: 309 NQNYLTGNISETFGTY--PNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIP 366
Q F T P L + L+ N G I P LS LD+S N +S S
Sbjct: 320 KQ----------FPTLDLPFLKSLTLTMNK--GSISFKKVALPSLSYLDLSRNALSFSGC 367
Query: 367 LEIGE--SLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLE 424
+ + L++LDLS N + +G + L L + L E + ++LE
Sbjct: 368 CSYSDLGTNSLRHLDLSFNGAIIMSANFMG-LEELQHLDFQHSTLKRVT--EFSAFLSLE 424
Query: 425 ---YLDLSANNLS-NFVPESLGSLVKLYYLNLSHNKLSQQ-IPIELDNLIHLSELDLSHN 479
YLD+S N +F LG L L L ++ N + N +L+ LDLS
Sbjct: 425 KLLYLDISYTNTKIDFDGIFLG-LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483
Query: 480 FLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLE 530
L + + L+ LN+S+NNL L + +++ L +D S+N++E
Sbjct: 484 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 96 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 151
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 152 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 211 GVIMYILLCGYPP 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 25/191 (13%)
Query: 619 RSVLTFEGKIVYEEIISATNDFNAEHCIGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGE 677
R L F+G I+ + +++ +H IG+G +G VY A + + A+KK +
Sbjct: 11 RENLYFQGAIIKN--VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDL 68
Query: 678 MSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYE-YLESGSLDKIL-CNDASA 735
+ ++ L EI L ++ I++ H II E L+ L +L D+
Sbjct: 69 IDCKR--ILREITILNRLKSDYIIRL--------HDLIIPEDLLKFDELYIVLEIADSDL 118
Query: 736 KELGWTQRLNVIKGVADALF-------YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDF 788
K+L T + V L+ ++H + I+HRD+ N LL+ + DF
Sbjct: 119 KKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDF 175
Query: 789 GIAKFLNPDSS 799
G+A+ +N D
Sbjct: 176 GLARTINSDKD 186
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 105 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 160
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 161 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 220 GVIMYILLCGYPP 232
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 95 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 150
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 151 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 210 GVIMYILLCGYPP 222
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK-----KFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
IGKG V R +G+ FAVK KF S PG E+ E ++H +
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS-PG---LSTEDLKREASICHMLKHPH 89
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV----IKGVADALF 755
IV+ S ++++E+++ L + A A G+ V ++ + +AL
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQILEALR 146
Query: 756 YLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
Y H+N I+HRD+ VLL + + FG+A L GT ++A
Sbjct: 147 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKHP----RDFLFE 849
PE+ + DV+ GV+ ++ G P ++ LFE
Sbjct: 204 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 244
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 90 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 145
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 146 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 205 GVIMYILLCGYPP 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 89 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 144
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 145 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 204 GVIMYILLCGYPP 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 115/267 (43%), Gaps = 35/267 (13%)
Query: 646 IGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKF 703
IG GG V++ +I+A+K + + + + NEI L +++ + I++
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTL--DSYRNEIAYLNKLQQHSDKIIRL 121
Query: 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFP 763
Y + ++ IY +E G++D + K + +R + K + +A+ +H +
Sbjct: 122 YDYEITDQY---IYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG-- 175
Query: 764 PIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKV 821
IVH D+ N L+ G + DFGIA + PD+++ G Y+ PE +
Sbjct: 176 -IVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 822 TEK-----------CDVYSFGVLALEVIKGKHPRDFLFEXXXXXXXXXIEMLDS--RLPY 868
+ + DV+S G + + GK P F+ ++D + +
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP----FQQIINQISKLHAIIDPNHEIEF 289
Query: 869 PSLHVQKKLMSIMQVAFSCLDQNPESR 895
P + +K L +++ CL ++P+ R
Sbjct: 290 PDI-PEKDLQDVLKC---CLKRDPKQR 312
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 15/200 (7%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG G G V A G AVKK P + ++ E+ L + H+NI+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRA--YRELVLLKCVNHKNIISLL 87
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P+ + ++ YL +D LC EL + ++ + + +LH+
Sbjct: 88 NVFT-PQKTLEEFQDVYLVMELMDANLCQ-VIHMELDHERMSYLLYQMLCGIKHLHSAG- 144
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNW--SELAGTHGYVAPELAYTLK 820
I+HRD+ N+++ + DFG+A+ S+N+ + T Y APE+ +
Sbjct: 145 --IIHRDLKPSNIVVKSDCTLKILDFGLARTA---STNFMMTPYVVTRYYRAPEVILGMG 199
Query: 821 VTEKCDVYSFGVLALEVIKG 840
E D++S G + E++KG
Sbjct: 200 YKENVDIWSVGCIMGELVKG 219
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT Y+AP +
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEYLAPAI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 91 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPE 146
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 206 GVIMYILLCGYPP 218
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 141 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 196
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 197 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 256 GVIMYILLCGYPP 268
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 135 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 190
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 250 GVIMYILLCGYPP 262
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 646 IGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG G G V A E A+KK P + ++ E+ + + H+NI+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKVVNHKNIIGLL 89
Query: 705 GFCSHPKHS-------FIIYEYLESGSLDKILCNDASAKELGWT--QRLNVIKGVADALF 755
+ P+ S +I+ E +++ +L +++ + + + + Q L IK
Sbjct: 90 NVFT-PQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIK------- 140
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
+LH+ I+HRD+ N+++ + DFG+A+ S + T Y APE+
Sbjct: 141 HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEV 196
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKG 840
+ E D++S GV+ E+IKG
Sbjct: 197 ILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 27/221 (12%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVK-----KFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699
IGKG V R +G+ FAVK KF S PG E+ E ++H +
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS-PG---LSTEDLKREASICHMLKHPH 87
Query: 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNV----IKGVADALF 755
IV+ S ++++E+++ L + A A G+ V ++ + +AL
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADA---GFVYSEAVASHYMRQILEALR 144
Query: 756 YLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812
Y H+N I+HRD+ VLL + + FG+A L GT ++A
Sbjct: 145 YCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 813 PELAYTLKVTEKCDVYSFGVLALEVIKGKHP----RDFLFE 849
PE+ + DV+ GV+ ++ G P ++ LFE
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 242
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773
I+ E L+ G L + D + + ++K + +A+ YLH+ I HRD+ +
Sbjct: 91 LIVMECLDGGELFSRI-QDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPE 146
Query: 774 NVLLDLGYEAHV---SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSF 830
N+L + +DFG AK +S + T YVAPE+ K + CD++S
Sbjct: 147 NLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 831 GVLALEVIKGKHP 843
GV+ ++ G P
Sbjct: 206 GVIMYILLCGYPP 218
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 96/216 (44%), Gaps = 32/216 (14%)
Query: 646 IGKGGHGSVYRA-KVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
+G GG+G V+ A + A+KK P + + L EI+ + + H NIVK +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSV----KHALREIKIIRRLDHDNIVKVF 74
Query: 705 --------------GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV 750
G + +I+ EY+E+ L +L +E +++G
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRG- 132
Query: 751 ADALFYLHNNCFPPIVHRDISSKNVLLDL-GYEAHVSDFGIAKFLNPDSSNWSELAG--- 806
L Y+H+ ++HRD+ N+ ++ + DFG+A+ ++P S+ L+
Sbjct: 133 ---LKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 807 THGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGK 841
T Y +P L + T+ D+++ G + E++ GK
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 646 IGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG G G V A E A+KK P + ++ E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVNHKNIIGLL 89
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P+ S ++ Y+ +D LC EL + ++ + + +LH+
Sbjct: 90 NVFT-PQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
I+HRD+ N+++ + DFG+A+ E+ T Y APE+ +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVV-TRYYRAPEVILGMGYK 203
Query: 823 EKCDVYSFGVLALEVIKG 840
E D++S G + E+IKG
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 29/207 (14%)
Query: 646 IGKGGHG---SVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK 702
IG G G + Y A + A+KK P + ++ E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRA--YRELVLMKVVNHKNIIG 87
Query: 703 FYGFCSHPKHS-------FIIYEYLESGSLDKILCNDASAKELGWT--QRLNVIKGVADA 753
+ P+ S +I+ E +++ +L +++ + + + + Q L IK
Sbjct: 88 LLNVFT-PQKSLEEFQDVYIVMELMDA-NLSQVIQMELDHERMSYLLYQMLVGIK----- 140
Query: 754 LFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAP 813
+LH+ I+HRD+ N+++ + DFG+A+ S + T Y AP
Sbjct: 141 --HLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAG-TSFMMTPYVVTRYYRAP 194
Query: 814 ELAYTLKVTEKCDVYSFGVLALEVIKG 840
E+ + E D++S GV+ E+IKG
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 82/211 (38%), Gaps = 30/211 (14%)
Query: 325 PNLTFIDLSNN--SFFGEI-LSDWGRCPQLSLLDVSINNI----SGSIPLEIGESLQLQ- 376
P+L F+DLS N SF G SD+G L LD+S N + S + LE E L Q
Sbjct: 347 PSLEFLDLSRNGLSFKGCCSQSDFGT-TSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 405
Query: 377 -------------------YLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLS-GCIPRE 416
YLD+S + + L L ++GN +P
Sbjct: 406 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
Query: 417 LGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 476
L NL +LDLS L P + SL L LN+SHN L L LD
Sbjct: 466 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 525
Query: 477 SHNFLGEKISSRICRM-ESLEKLNLSYNNLS 506
S N + + SL LNL+ N+ +
Sbjct: 526 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 556
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 374 QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNL 433
+LQ LDLS I ++ +L+ L L+GN + L +L+ L NL
Sbjct: 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112
Query: 434 SNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLSELDLSHNFLGEKISSRIC 490
++ +G L L LN++HN + S ++P NL +L LDLS N KI S C
Sbjct: 113 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN----KIQSIYC 166
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 103 FSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVL 162
+SF SFP L LDL E+ I +LS+L L + N + L+ L L
Sbjct: 46 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNN 215
L+ +G L L +L + N + +P NLT++ L L +N
Sbjct: 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 756 YLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPEL 815
YLH+ +++RD+ +N+L+D V+DFG AK + W L GT +APE+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--GRTWX-LCGTPEALAPEI 209
Query: 816 AYTLKVTEKCDVYSFGVLALEVIKGKHP 843
+ + D ++ GVL E+ G P
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 345 WGRC------PQLSLLDVSINNISGSIPLEIGESL---QLQYLDLSSNYIVGEIPTQLG- 394
W +C ++ LD+S N S+ +++ ++Q L LS++Y +G + G
Sbjct: 202 WEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG---SSFGH 258
Query: 395 -NIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLS 453
N + + G + SG ++ DLS + + + L L L+
Sbjct: 259 TNFKDPDNFTFKGLEASG-----------VKTCDLSKSKIFALLKSVFSHFTDLEQLTLA 307
Query: 454 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCF 513
N++++ L HL +L+LS NFLG S ++ LE L+LSYN++ L + F
Sbjct: 308 QNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSF 367
Query: 514 EEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEAL 547
+ L + + N+L+ +P+ R L+ +
Sbjct: 368 LGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKI 400
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 99 TLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGI-GLLT 157
LL+ FS F L L L NE+ I L++L L+ S N G I S + L
Sbjct: 289 ALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FLGSIDSRMFENLD 347
Query: 158 HLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSL-GNLTHVVILYLYNNS 216
L VL +S N + L L +LALD+N L S+P + LT + ++L+ N
Sbjct: 348 KLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNP 406
Query: 217 FFGSIPQ 223
+ S P+
Sbjct: 407 WDCSCPR 413
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 179 QLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEI-GNLKSLFDLELC 237
T L QL L N +N + LTH++ L L N F GSI + NL L L+L
Sbjct: 297 HFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQN-FLGSIDSRMFENLDKLEVLDLS 355
Query: 238 INQLSGAIPLSISNLTNLRFLFLYHNELSGI 268
N + S L NL+ L L N+L +
Sbjct: 356 YNHIRALGDQSFLGLPNLKELALDTNQLKSV 386
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 82/211 (38%), Gaps = 30/211 (14%)
Query: 325 PNLTFIDLSNN--SFFGEI-LSDWGRCPQLSLLDVSINNI----SGSIPLEIGESLQLQ- 376
P+L F+DLS N SF G SD+G L LD+S N + S + LE E L Q
Sbjct: 371 PSLEFLDLSRNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVITMSSNFLGLEQLEHLDFQH 429
Query: 377 -------------------YLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLS-GCIPRE 416
YLD+S + + L L ++GN +P
Sbjct: 430 SNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 489
Query: 417 LGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 476
L NL +LDLS L P + SL L LN+SHN L L LD
Sbjct: 490 FTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 549
Query: 477 SHNFLGEKISSRICRM-ESLEKLNLSYNNLS 506
S N + + SL LNL+ N+ +
Sbjct: 550 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 374 QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNL 433
+LQ LDLS I ++ +L+ L L+GN + L +L+ L NL
Sbjct: 77 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 136
Query: 434 SNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLSELDLSHNFLGEKISSRIC 490
++ +G L L LN++HN + S ++P NL +L LDLS N KI S C
Sbjct: 137 ASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN----KIQSIYC 190
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 103 FSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVL 162
+SF SFP L LDL E+ I +LS+L L + N + L+ L L
Sbjct: 70 YSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 129
Query: 163 HISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNN 215
L+ +G L L +L + N + +P NLT++ L L +N
Sbjct: 130 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 15/187 (8%)
Query: 96 LNGTLLEFSFSSFPHLV---------YLDLYNNELFGIIPPQISNLSNLEYLDFSANKL- 145
+N +L S + F H+V +L+ N + S L L+ L N L
Sbjct: 331 MNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK 390
Query: 146 -FGQIPSGIGLLTHLTVLHISRNWL-SGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGN 203
F ++ ++ L L +S N L S + + L L SN L GS+ R L
Sbjct: 391 NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP- 449
Query: 204 LTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHN 263
V +L L+NN SIP+++ +L++L +L + NQL LT+L++++L+ N
Sbjct: 450 -PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507
Query: 264 ELSGIIP 270
P
Sbjct: 508 PWDCTCP 514
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 413 IPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHL 471
+P++L + L LS N++S + L +L L LSHN++ S + L N L
Sbjct: 46 VPKDLPP--RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQ-DL 102
Query: 472 SELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE 514
LD+SHN L + IS C M SL L+LS+N+ ++P C E
Sbjct: 103 EYLDVSHNRL-QNISC--CPMASLRHLDLSFNDF-DVLPVCKE 141
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 6/161 (3%)
Query: 377 YLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGS--LINLEYLDLSANNLS 434
+L+ + N + + L L L N L L + + +LE LD+S N+L+
Sbjct: 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416
Query: 435 NFVPESLGSLVK-LYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRME 493
+ + + + + LNLS N L+ + L + + LDL HN I + ++
Sbjct: 417 SHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKV--LDL-HNNRIMSIPKDVTHLQ 473
Query: 494 SLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534
+L++LN++ N L + F+ + L +I + N + P
Sbjct: 474 ALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 646 IGKGGHGSVYRAKVPSGEI-FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFY 704
IG G G V A E A+KK P + ++ E+ + + H+NI+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA--YRELVLMKCVNHKNIIGLL 89
Query: 705 GFCSHPKHSFIIYE--YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF 762
+ P+ S ++ Y+ +D LC EL + ++ + + +LH+
Sbjct: 90 NVFT-PQKSLEEFQDVYIVMELMDANLCQ-VIQMELDHERMSYLLYQMLCGIKHLHSAG- 146
Query: 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT 822
I+HRD+ N+++ + DFG+A+ S + T Y APE+ +
Sbjct: 147 --IIHRDLKPSNIVVKSDCTLKILDFGLARTAG-TSFMMTPYVVTRYYRAPEVILGMGYK 203
Query: 823 EKCDVYSFGVLALEVIKG 840
E D++S G + E+IKG
Sbjct: 204 ENVDIWSVGCIMGEMIKG 221
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,679,464
Number of Sequences: 62578
Number of extensions: 1073259
Number of successful extensions: 5779
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 503
Number of HSP's that attempted gapping in prelim test: 2560
Number of HSP's gapped (non-prelim): 1732
length of query: 912
length of database: 14,973,337
effective HSP length: 108
effective length of query: 804
effective length of database: 8,214,913
effective search space: 6604790052
effective search space used: 6604790052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)