Query 039137
Match_columns 912
No_of_seqs 941 out of 6517
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 10:54:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039137.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039137hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.7E-73 2.6E-77 692.2 36.1 528 28-567 3-752 (768)
2 4eco_A Uncharacterized protein 100.0 6.5E-60 2.2E-64 564.6 23.2 480 33-533 26-603 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 1.2E-57 4E-62 552.9 28.4 476 33-529 265-863 (876)
4 3rgz_A Protein brassinosteroid 100.0 7.8E-57 2.7E-61 550.6 24.5 444 85-531 201-741 (768)
5 3t6q_A CD180 antigen; protein- 100.0 1.2E-53 4.2E-58 510.5 35.4 468 84-554 33-561 (606)
6 1ziw_A TOLL-like receptor 3; i 100.0 1.3E-52 4.5E-57 508.5 34.6 471 84-555 25-624 (680)
7 3j0a_A TOLL-like receptor 5; m 100.0 8.6E-53 3E-57 520.1 32.5 470 73-554 14-561 (844)
8 3t6q_A CD180 antigen; protein- 100.0 7.8E-53 2.7E-57 503.6 30.8 426 109-535 33-518 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 3E-52 1E-56 498.5 32.1 461 84-555 32-560 (606)
10 1ziw_A TOLL-like receptor 3; i 100.0 2.6E-50 8.7E-55 488.4 33.3 432 104-535 92-627 (680)
11 2z63_A TOLL-like receptor 4, v 100.0 3.4E-50 1.2E-54 477.2 30.9 443 84-536 28-537 (570)
12 3j0a_A TOLL-like receptor 5; m 100.0 2E-50 6.9E-55 499.0 29.5 441 84-534 48-564 (844)
13 3vq2_A TLR4, TOLL-like recepto 100.0 8.8E-50 3E-54 477.2 29.4 440 84-535 56-563 (606)
14 4fih_A Serine/threonine-protei 100.0 1.4E-50 4.9E-55 437.8 19.4 249 638-903 74-323 (346)
15 3omv_A RAF proto-oncogene seri 100.0 3.3E-50 1.1E-54 429.8 21.7 256 637-907 35-297 (307)
16 4b9d_A Serine/threonine-protei 100.0 6.9E-51 2.4E-55 440.9 16.2 253 637-903 23-276 (350)
17 4asz_A BDNF/NT-3 growth factor 100.0 8.1E-51 2.8E-55 434.9 16.5 256 638-909 13-288 (299)
18 4gt4_A Tyrosine-protein kinase 100.0 2.5E-50 8.5E-55 433.0 20.0 255 638-907 26-303 (308)
19 4eco_A Uncharacterized protein 100.0 6.6E-51 2.3E-55 486.7 16.6 488 33-554 23-601 (636)
20 4aoj_A High affinity nerve gro 100.0 4.5E-50 1.5E-54 435.2 21.4 256 638-909 41-318 (329)
21 2z81_A CD282 antigen, TOLL-lik 100.0 7.3E-50 2.5E-54 472.1 24.0 450 72-534 3-514 (549)
22 4g3f_A NF-kappa-beta-inducing 100.0 7E-50 2.4E-54 431.2 19.5 253 638-911 58-317 (336)
23 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.7E-50 5.8E-55 430.5 12.9 249 638-902 32-283 (311)
24 3hyh_A Carbon catabolite-derep 100.0 2.4E-49 8.1E-54 416.2 20.1 248 638-903 13-262 (275)
25 4ecn_A Leucine-rich repeat pro 100.0 6.8E-49 2.3E-53 476.2 25.5 412 109-533 323-843 (876)
26 4fie_A Serine/threonine-protei 100.0 2.8E-49 9.6E-54 438.2 20.2 250 637-903 150-400 (423)
27 2z63_A TOLL-like receptor 4, v 100.0 2.8E-48 9.6E-53 460.8 29.2 437 109-554 28-532 (570)
28 3fpq_A Serine/threonine-protei 100.0 1.1E-48 3.6E-53 415.1 20.5 246 641-903 29-282 (290)
29 3ubd_A Ribosomal protein S6 ki 100.0 1.1E-49 3.7E-54 424.7 10.1 244 638-898 24-271 (304)
30 4ase_A Vascular endothelial gr 100.0 1.4E-48 4.8E-53 426.8 16.9 267 630-910 56-347 (353)
31 2z7x_B TOLL-like receptor 1, v 100.0 3.6E-48 1.2E-52 454.2 19.4 412 109-534 21-485 (520)
32 3hmm_A TGF-beta receptor type- 100.0 2.6E-47 8.7E-52 411.0 21.0 263 638-910 3-297 (303)
33 4g31_A Eukaryotic translation 100.0 1.7E-47 6E-52 409.9 19.4 250 638-903 5-279 (299)
34 2z81_A CD282 antigen, TOLL-lik 100.0 8.3E-47 2.8E-51 445.9 21.9 459 78-554 2-511 (549)
35 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-46 6.2E-51 439.7 19.7 425 112-554 3-482 (520)
36 4g8a_A TOLL-like receptor 4; l 100.0 3.1E-44 1.1E-48 431.8 31.4 419 110-531 53-581 (635)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-44 4E-49 428.0 22.9 429 87-534 34-514 (562)
38 4b99_A Mitogen-activated prote 100.0 1.2E-44 4.1E-49 402.8 20.5 257 638-903 54-344 (398)
39 3v47_A TOLL-like receptor 5B a 100.0 7.1E-44 2.4E-48 410.5 23.7 391 112-536 13-414 (455)
40 3v47_A TOLL-like receptor 5B a 100.0 8.8E-44 3E-48 409.7 23.1 364 109-510 30-412 (455)
41 4f9c_A Cell division cycle 7-r 100.0 9.4E-44 3.2E-48 391.6 20.4 198 633-845 16-248 (361)
42 3uto_A Twitchin; kinase, muscl 100.0 2E-43 6.8E-48 412.8 21.3 252 637-903 156-410 (573)
43 4g8a_A TOLL-like receptor 4; l 100.0 2.6E-42 8.9E-47 415.0 31.1 430 118-554 40-581 (635)
44 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-43 5.5E-48 385.2 17.5 292 33-360 2-302 (313)
45 3v5w_A G-protein coupled recep 100.0 2.5E-43 8.6E-48 407.3 18.6 252 637-902 188-448 (689)
46 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-42 5.2E-47 410.0 24.4 426 111-554 33-511 (562)
47 1jl5_A Outer protein YOPM; leu 100.0 2.6E-42 8.9E-47 394.4 24.1 377 107-535 9-416 (454)
48 3p86_A Serine/threonine-protei 100.0 7.3E-42 2.5E-46 371.5 20.2 265 634-911 33-299 (309)
49 3fxz_A Serine/threonine-protei 100.0 2.7E-41 9.4E-46 365.1 21.5 250 637-903 19-269 (297)
50 3uim_A Brassinosteroid insensi 100.0 4.4E-41 1.5E-45 369.1 21.9 278 626-908 18-309 (326)
51 2qkw_B Protein kinase; three-h 100.0 4.4E-41 1.5E-45 368.2 21.8 271 631-910 32-315 (321)
52 1jl5_A Outer protein YOPM; leu 100.0 5.5E-41 1.9E-45 383.4 23.1 393 84-534 11-433 (454)
53 3s95_A LIMK-1, LIM domain kina 100.0 5.9E-41 2E-45 365.3 21.9 258 637-909 9-281 (310)
54 2yab_A Death-associated protei 100.0 1.1E-40 3.6E-45 369.2 23.6 255 637-903 11-272 (361)
55 3fe3_A MAP/microtubule affinit 100.0 6.6E-41 2.2E-45 366.5 20.4 249 637-903 14-264 (328)
56 2nru_A Interleukin-1 receptor- 100.0 1.4E-39 4.8E-44 353.9 30.6 276 626-909 13-305 (307)
57 4eqm_A Protein kinase; transfe 100.0 6E-41 2E-45 362.0 19.1 262 637-910 10-275 (294)
58 3zgw_A Maternal embryonic leuc 100.0 6.1E-41 2.1E-45 368.8 19.4 250 636-903 8-260 (347)
59 2c30_A Serine/threonine-protei 100.0 2.7E-40 9.3E-45 361.4 24.4 261 626-903 23-294 (321)
60 3bz5_A Internalin-J, INLJ; leu 100.0 1.7E-40 6E-45 379.6 23.5 357 104-536 37-393 (457)
61 3soa_A Calcium/calmodulin-depe 100.0 1.1E-40 3.8E-45 378.8 21.6 255 636-903 9-267 (444)
62 1tki_A Titin; serine kinase, m 100.0 1.5E-40 5.2E-45 363.0 20.9 251 637-903 4-257 (321)
63 2psq_A Fibroblast growth facto 100.0 3.1E-40 1.1E-44 368.0 23.6 259 637-910 80-364 (370)
64 1o6l_A RAC-beta serine/threoni 100.0 1E-40 3.5E-45 365.9 19.0 251 637-903 4-260 (337)
65 4dc2_A Protein kinase C IOTA t 100.0 5.3E-41 1.8E-45 374.8 16.8 263 637-910 51-322 (396)
66 2bdw_A Hypothetical protein K1 100.0 2.6E-40 9E-45 367.2 21.8 254 636-903 27-284 (362)
67 4euu_A Serine/threonine-protei 100.0 7E-40 2.4E-44 358.3 24.4 265 637-909 8-308 (319)
68 2y0a_A Death-associated protei 100.0 4E-40 1.4E-44 360.9 22.3 255 637-903 10-271 (326)
69 3kul_A Ephrin type-A receptor 100.0 1.4E-40 5E-45 364.2 18.5 257 637-910 48-313 (325)
70 3c0i_A Peripheral plasma membr 100.0 1.5E-40 5E-45 368.2 18.7 258 637-903 23-286 (351)
71 1o6v_A Internalin A; bacterial 100.0 2.6E-39 8.9E-44 372.9 28.9 346 107-483 44-389 (466)
72 1o6v_A Internalin A; bacterial 100.0 1.9E-39 6.7E-44 374.0 27.2 347 130-507 43-389 (466)
73 3a8x_A Protein kinase C IOTA t 100.0 2.1E-40 7.3E-45 365.2 18.3 262 638-910 9-279 (345)
74 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.6E-41 3.3E-45 368.7 15.0 247 636-898 21-269 (353)
75 4hcu_A Tyrosine-protein kinase 100.0 2.6E-40 8.9E-45 352.4 17.7 256 637-910 9-266 (269)
76 3qd2_B Eukaryotic translation 100.0 1.1E-39 3.9E-44 358.8 22.9 251 637-903 5-325 (332)
77 3niz_A Rhodanese family protei 100.0 9.4E-40 3.2E-44 355.5 21.8 257 637-903 20-300 (311)
78 3q4u_A Activin receptor type-1 100.0 1.3E-39 4.3E-44 353.2 21.5 257 637-908 7-300 (301)
79 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.3E-40 1.8E-44 349.8 17.9 256 637-910 7-264 (268)
80 3a62_A Ribosomal protein S6 ki 100.0 8.3E-40 2.8E-44 358.5 19.8 252 637-903 16-276 (327)
81 3lb7_A RAF proto-oncogene seri 100.0 2.3E-39 7.9E-44 351.7 22.5 259 637-909 35-299 (307)
82 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.7E-40 9.2E-45 362.2 15.2 248 638-903 9-258 (336)
83 2qol_A Ephrin receptor; recept 100.0 7.8E-40 2.7E-44 364.9 19.2 257 637-910 44-309 (373)
84 1ob3_A PFPK5, cell division co 100.0 6.8E-40 2.3E-44 352.8 17.8 258 638-903 2-280 (288)
85 3tki_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 357.2 19.3 252 637-903 6-261 (323)
86 3o0g_A Cell division protein k 100.0 1.5E-39 5E-44 351.0 20.4 258 638-903 2-282 (292)
87 2zv2_A Calcium/calmodulin-depe 100.0 1E-39 3.6E-44 353.3 19.1 253 637-903 12-292 (298)
88 3dtc_A Mitogen-activated prote 100.0 6.6E-40 2.3E-44 349.6 17.3 255 637-907 6-270 (271)
89 2izr_A Casein kinase I isoform 100.0 5.1E-40 1.8E-44 361.1 16.8 260 637-911 8-282 (330)
90 1xjd_A Protein kinase C, theta 100.0 2.8E-40 9.7E-45 363.4 14.6 252 635-902 14-268 (345)
91 3gen_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 348.8 20.3 257 637-911 23-281 (283)
92 3kn6_A Ribosomal protein S6 ki 100.0 6.6E-40 2.3E-44 358.8 17.2 247 643-902 16-269 (325)
93 3cbl_A C-FES, proto-oncogene t 100.0 4.6E-40 1.6E-44 367.9 16.1 257 637-910 113-374 (377)
94 3soc_A Activin receptor type-2 100.0 7.4E-40 2.5E-44 358.3 17.4 264 637-910 23-318 (322)
95 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-39 5E-44 359.7 19.8 251 636-903 51-305 (349)
96 1kob_A Twitchin; kinase, intra 100.0 2E-39 6.9E-44 362.2 21.1 252 637-903 50-304 (387)
97 1luf_A Muscle-specific tyrosin 100.0 1E-39 3.4E-44 361.0 18.2 263 635-911 44-336 (343)
98 2ivs_A Proto-oncogene tyrosine 100.0 2.1E-39 7.1E-44 353.8 20.4 260 637-911 22-312 (314)
99 2i0e_A Protein kinase C-beta I 100.0 7.2E-40 2.5E-44 361.4 16.6 247 636-898 18-266 (353)
100 2a2a_A Death-associated protei 100.0 4E-39 1.4E-43 352.5 22.1 255 637-903 11-272 (321)
101 3tt0_A Basic fibroblast growth 100.0 2.8E-39 9.6E-44 362.4 21.3 259 637-910 68-352 (382)
102 1fot_A TPK1 delta, CAMP-depend 100.0 1.3E-39 4.3E-44 354.7 17.8 248 637-903 5-258 (318)
103 3ugc_A Tyrosine-protein kinase 100.0 5.5E-40 1.9E-44 354.9 14.5 262 637-911 9-292 (295)
104 3vhe_A Vascular endothelial gr 100.0 6.9E-40 2.3E-44 364.8 15.7 267 630-910 14-355 (359)
105 3ork_A Serine/threonine protei 100.0 5.5E-40 1.9E-44 357.7 14.5 259 637-907 11-278 (311)
106 2qr7_A Ribosomal protein S6 ki 100.0 1.4E-39 4.8E-44 358.2 17.7 252 636-903 20-277 (342)
107 3qup_A Tyrosine-protein kinase 100.0 3.1E-39 1E-43 354.0 20.2 262 636-911 21-299 (323)
108 4eut_A Serine/threonine-protei 100.0 2.3E-39 8E-44 364.7 19.6 267 637-911 8-310 (396)
109 3f3z_A Calcium/calmodulin-depe 100.0 4.3E-39 1.5E-43 344.6 20.5 251 636-903 7-261 (277)
110 1rjb_A FL cytokine receptor; k 100.0 1.1E-39 3.8E-44 360.8 16.5 263 636-911 43-335 (344)
111 2r5t_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 361.2 17.7 257 637-909 37-296 (373)
112 3kk8_A Calcium/calmodulin depe 100.0 4.2E-39 1.4E-43 346.0 20.4 253 637-903 5-261 (284)
113 4fr4_A YANK1, serine/threonine 100.0 1.5E-39 5.2E-44 361.8 17.4 252 638-903 15-271 (384)
114 2i1m_A Macrophage colony-stimu 100.0 6.5E-40 2.2E-44 360.9 14.0 262 635-911 43-327 (333)
115 2pmi_A Negative RE, cyclin-dep 100.0 3E-39 1E-43 352.6 19.0 261 636-903 3-293 (317)
116 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.7E-39 5.8E-44 358.5 17.1 247 638-903 41-293 (350)
117 1csn_A Casein kinase-1; phosph 100.0 2.1E-39 7.3E-44 350.8 17.6 261 637-911 9-284 (298)
118 1t46_A HOMO sapiens V-KIT hard 100.0 2.7E-39 9.3E-44 352.7 18.5 263 636-911 21-308 (313)
119 3hko_A Calcium/calmodulin-depe 100.0 2.3E-39 7.7E-44 358.5 18.1 263 633-903 21-330 (345)
120 4f0f_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 346.0 20.1 256 637-907 18-286 (287)
121 3og7_A AKAP9-BRAF fusion prote 100.0 3.8E-39 1.3E-43 347.2 18.9 261 637-911 23-289 (289)
122 2h34_A Serine/threonine-protei 100.0 3E-39 1E-43 351.4 18.2 264 635-911 31-297 (309)
123 3l9p_A Anaplastic lymphoma kin 100.0 2.1E-39 7.2E-44 361.0 17.2 260 637-910 70-345 (367)
124 2eva_A TAK1 kinase - TAB1 chim 100.0 4.1E-39 1.4E-43 349.9 18.7 254 638-910 8-263 (307)
125 3bz5_A Internalin-J, INLJ; leu 100.0 1.9E-38 6.5E-43 362.7 25.2 355 84-515 42-396 (457)
126 2wqm_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 349.4 20.1 264 637-909 31-296 (310)
127 2eue_A Carbon catabolite derep 100.0 4.9E-39 1.7E-43 343.7 18.9 248 638-903 13-262 (275)
128 1mp8_A Focal adhesion kinase 1 100.0 4.6E-39 1.6E-43 345.0 18.6 257 637-911 14-277 (281)
129 2x4f_A Myosin light chain kina 100.0 4.4E-39 1.5E-43 358.6 19.0 247 642-903 93-342 (373)
130 3cok_A Serine/threonine-protei 100.0 2.2E-39 7.7E-44 346.9 15.6 252 637-903 10-262 (278)
131 4ejn_A RAC-alpha serine/threon 100.0 1.8E-39 6.1E-44 371.7 15.3 251 637-903 147-404 (446)
132 3t9t_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 342.8 16.9 256 637-910 7-264 (267)
133 4e5w_A Tyrosine-protein kinase 100.0 4.9E-39 1.7E-43 348.8 17.9 260 638-909 21-301 (302)
134 2y94_A 5'-AMP-activated protei 100.0 4.8E-39 1.7E-43 367.5 18.7 249 638-903 16-266 (476)
135 3kmu_A ILK, integrin-linked ki 100.0 5.1E-39 1.7E-43 342.7 17.7 253 637-910 9-270 (271)
136 3v8s_A RHO-associated protein 100.0 3.5E-40 1.2E-44 370.3 9.0 257 632-903 63-329 (410)
137 2rku_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 345.5 19.2 251 637-903 14-265 (294)
138 2y7j_A Phosphorylase B kinase 100.0 2.3E-38 7.8E-43 352.4 23.2 262 630-903 86-359 (365)
139 3bhy_A Death-associated protei 100.0 1.4E-38 4.7E-43 341.7 20.6 255 637-903 4-265 (283)
140 2pvf_A Fibroblast growth facto 100.0 1.1E-38 3.8E-43 351.1 20.2 259 637-910 34-318 (334)
141 4agu_A Cyclin-dependent kinase 100.0 7.8E-39 2.7E-43 348.7 18.7 258 638-903 3-284 (311)
142 1p4o_A Insulin-like growth fac 100.0 1.7E-39 5.8E-44 355.9 13.4 265 632-910 19-299 (322)
143 1k9a_A Carboxyl-terminal SRC k 100.0 1.6E-38 5.5E-43 363.7 22.0 250 637-909 192-444 (450)
144 3uc3_A Serine/threonine-protei 100.0 6.8E-39 2.3E-43 355.9 18.3 252 637-903 19-274 (361)
145 2id5_A Lingo-1, leucine rich r 100.0 2.8E-38 9.4E-43 366.0 24.2 320 112-458 14-333 (477)
146 1qcf_A Haematopoetic cell kina 100.0 4.6E-39 1.6E-43 368.8 17.4 255 636-909 186-443 (454)
147 1nxk_A MAP kinase-activated pr 100.0 1.5E-38 5E-43 357.9 20.6 252 637-903 60-321 (400)
148 3poz_A Epidermal growth factor 100.0 8.7E-39 3E-43 350.7 18.2 255 637-910 14-278 (327)
149 3op5_A Serine/threonine-protei 100.0 1.8E-39 6E-44 361.8 12.9 265 636-911 33-330 (364)
150 3gni_B Strad alpha; kinase fol 100.0 2E-38 6.8E-43 356.8 21.5 256 637-903 24-333 (389)
151 3kfa_A Tyrosine-protein kinase 100.0 1.7E-39 5.8E-44 349.8 12.2 257 636-911 11-272 (288)
152 3gxj_A TGF-beta receptor type- 100.0 5.5E-40 1.9E-44 356.4 8.3 259 637-910 2-297 (303)
153 3p1a_A MYT1 kinase, membrane-a 100.0 2.2E-38 7.7E-43 344.8 21.0 246 638-903 57-304 (311)
154 3fdn_A Serine/threonine-protei 100.0 5.5E-39 1.9E-43 344.1 15.9 249 637-903 8-257 (279)
155 2owb_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 351.2 18.4 251 637-903 40-291 (335)
156 2id5_A Lingo-1, leucine rich r 100.0 3.4E-38 1.2E-42 365.2 23.5 319 161-482 15-333 (477)
157 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.2E-39 1.8E-43 352.8 15.8 260 635-903 31-318 (329)
158 3kex_A Receptor tyrosine-prote 100.0 8.1E-39 2.8E-43 350.7 17.3 255 638-910 13-276 (325)
159 1qpc_A LCK kinase; alpha beta 100.0 1.4E-38 4.7E-43 341.0 18.7 255 637-910 12-269 (279)
160 3mdy_A Bone morphogenetic prot 100.0 6.4E-38 2.2E-42 345.7 24.3 265 634-910 33-331 (337)
161 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.4E-39 2.2E-43 370.4 16.9 254 637-899 184-439 (543)
162 3i6u_A CDS1, serine/threonine- 100.0 1.5E-38 5.1E-43 360.4 19.5 257 635-903 132-399 (419)
163 2ac3_A MAP kinase-interacting 100.0 1.6E-38 5.3E-43 347.2 19.0 257 637-903 11-295 (316)
164 1opk_A P150, C-ABL, proto-onco 100.0 7E-39 2.4E-43 370.7 17.2 255 637-910 219-478 (495)
165 3dls_A PAS domain-containing s 100.0 9.1E-39 3.1E-43 351.2 17.1 247 636-904 22-275 (335)
166 3is5_A Calcium-dependent prote 100.0 1.4E-38 4.9E-43 341.9 18.2 253 637-903 21-278 (285)
167 3nyv_A Calmodulin-domain prote 100.0 1.3E-38 4.5E-43 368.8 19.3 253 637-903 25-281 (484)
168 1u59_A Tyrosine-protein kinase 100.0 3.8E-38 1.3E-42 339.0 21.5 256 638-911 9-273 (287)
169 3lm5_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 349.7 17.6 264 628-903 18-287 (327)
170 3lxp_A Non-receptor tyrosine-p 100.0 1.3E-38 4.4E-43 347.9 18.0 260 640-911 33-311 (318)
171 2jam_A Calcium/calmodulin-depe 100.0 1.9E-38 6.6E-43 344.4 19.2 251 636-903 7-261 (304)
172 2clq_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 340.4 21.5 253 638-903 22-278 (295)
173 3brb_A Proto-oncogene tyrosine 100.0 2.4E-38 8.3E-43 345.2 19.9 263 636-912 32-310 (313)
174 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.1E-38 3.9E-43 365.1 17.9 256 636-910 182-440 (452)
175 1b6c_B TGF-B superfamily recep 100.0 5.7E-38 2E-42 346.8 22.8 265 632-911 36-337 (342)
176 4hgt_A Casein kinase I isoform 100.0 1.4E-38 4.7E-43 344.1 17.5 263 635-911 6-281 (296)
177 3llt_A Serine/threonine kinase 100.0 2.3E-38 7.8E-43 352.6 19.7 199 634-845 31-260 (360)
178 2v62_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 357.1 12.4 264 637-910 36-328 (345)
179 3dbq_A Dual specificity protei 100.0 1.8E-38 6.1E-43 350.7 18.4 250 637-904 8-274 (343)
180 4aw2_A Serine/threonine-protei 100.0 1.6E-39 5.3E-44 367.8 10.1 261 631-903 67-338 (437)
181 3c1x_A Hepatocyte growth facto 100.0 1.6E-38 5.4E-43 354.0 18.0 258 638-911 89-356 (373)
182 3mwu_A Calmodulin-domain prote 100.0 1.9E-38 6.6E-43 367.4 19.4 253 636-903 20-276 (486)
183 1ua2_A CAK, cell division prot 100.0 2.4E-38 8.2E-43 350.1 19.2 264 634-903 6-291 (346)
184 3g33_A Cell division protein k 100.0 2.1E-38 7E-43 344.8 18.4 262 636-903 7-296 (308)
185 3ttj_A Mitogen-activated prote 100.0 3.8E-38 1.3E-42 361.0 21.3 255 637-903 61-355 (464)
186 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-38 7.4E-43 342.6 18.2 261 637-911 8-281 (296)
187 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.2E-38 1.4E-42 351.0 21.0 251 637-910 64-339 (365)
188 3lzb_A Epidermal growth factor 100.0 2.3E-38 7.9E-43 347.1 18.4 255 637-910 14-278 (327)
189 2yex_A Serine/threonine-protei 100.0 5.1E-38 1.8E-42 336.0 20.6 252 637-903 6-261 (276)
190 3f66_A Hepatocyte growth facto 100.0 3.5E-38 1.2E-42 341.3 19.5 259 637-911 24-292 (298)
191 4fvq_A Tyrosine-protein kinase 100.0 1E-38 3.5E-43 343.9 15.1 250 637-909 7-274 (289)
192 3a7i_A MST3 kinase, serine/thr 100.0 3.2E-38 1.1E-42 342.5 19.1 250 637-904 21-271 (303)
193 3lij_A Calcium/calmodulin depe 100.0 3.6E-38 1.2E-42 365.6 20.8 252 637-903 36-291 (494)
194 2zmd_A Dual specificity protei 100.0 3.1E-38 1.1E-42 354.2 19.5 248 638-903 56-320 (390)
195 1mqb_A Ephrin type-A receptor 100.0 3.5E-38 1.2E-42 346.6 19.6 256 638-910 44-309 (333)
196 3mtl_A Cell division protein k 100.0 8.6E-39 3E-43 350.2 14.6 257 638-903 2-281 (324)
197 3pls_A Macrophage-stimulating 100.0 4.8E-38 1.7E-42 340.2 20.3 257 639-911 22-288 (298)
198 1xbb_A Tyrosine-protein kinase 100.0 1.4E-38 4.6E-43 343.3 15.9 257 637-911 15-280 (291)
199 2acx_A G protein-coupled recep 100.0 7.6E-39 2.6E-43 370.3 14.7 256 637-903 183-444 (576)
200 2xir_A Vascular endothelial gr 100.0 2.5E-38 8.4E-43 345.6 18.0 267 630-910 19-310 (316)
201 3q5i_A Protein kinase; CDPK, m 100.0 5.4E-38 1.8E-42 365.1 22.0 255 636-903 34-301 (504)
202 1fvr_A Tyrosine-protein kinase 100.0 2.1E-38 7.3E-43 347.8 17.5 258 638-911 25-301 (327)
203 1u5q_A Serine/threonine protei 100.0 1.7E-38 5.8E-43 350.6 16.8 248 638-903 54-305 (348)
204 2w5a_A Serine/threonine-protei 100.0 9.6E-39 3.3E-43 342.2 14.3 256 637-905 5-269 (279)
205 3lxl_A Tyrosine-protein kinase 100.0 1.5E-38 5E-43 349.1 16.1 263 637-910 22-303 (327)
206 3oz6_A Mitogen-activated prote 100.0 2.2E-38 7.6E-43 356.2 17.5 201 635-845 6-232 (388)
207 2vd5_A DMPK protein; serine/th 100.0 5.7E-39 1.9E-43 360.7 12.2 260 631-903 54-327 (412)
208 3cc6_A Protein tyrosine kinase 100.0 5.1E-38 1.8E-42 336.9 18.8 256 637-910 11-273 (281)
209 4aaa_A Cyclin-dependent kinase 100.0 1.6E-38 5.4E-43 349.4 15.0 259 637-903 24-306 (331)
210 2vgo_A Serine/threonine-protei 100.0 2.7E-38 9.4E-43 339.6 16.4 249 637-903 13-262 (284)
211 2ycf_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 343.1 19.6 256 636-903 8-274 (322)
212 2jii_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 353.0 14.2 261 637-911 41-337 (352)
213 1x8b_A WEE1HU, WEE1-like prote 100.0 8E-38 2.7E-42 336.6 19.6 248 636-903 9-279 (289)
214 3q60_A ROP5B; pseudokinase, tr 100.0 1.8E-38 6E-43 354.7 14.9 254 638-903 62-352 (371)
215 1byg_A CSK, protein (C-termina 100.0 3.1E-38 1E-42 338.1 16.1 250 637-909 20-272 (278)
216 1phk_A Phosphorylase kinase; g 100.0 1.6E-37 5.3E-42 336.2 21.5 256 636-903 15-283 (298)
217 3com_A Serine/threonine-protei 100.0 8E-38 2.7E-42 341.2 19.0 251 636-903 27-278 (314)
218 2ozo_A Tyrosine-protein kinase 100.0 1.2E-37 4E-42 369.0 21.9 254 640-911 337-599 (613)
219 3g2f_A Bone morphogenetic prot 100.0 5.4E-38 1.8E-42 346.1 17.3 262 637-910 12-318 (336)
220 2r3i_A Cell division protein k 100.0 9.8E-38 3.4E-42 338.0 19.0 259 638-903 3-283 (299)
221 2buj_A Serine/threonine-protei 100.0 4.1E-38 1.4E-42 344.0 16.0 259 637-908 28-304 (317)
222 3n9x_A Phosphotransferase; mal 100.0 1.3E-37 4.4E-42 354.4 20.7 200 637-845 25-253 (432)
223 2yfx_A Tyrosine-protein kinase 100.0 7.2E-38 2.4E-42 343.6 17.7 259 637-909 29-303 (327)
224 1t4h_A Serine/threonine-protei 100.0 1.8E-37 6.1E-42 334.4 20.4 249 638-903 26-282 (290)
225 3mi9_A Cell division protein k 100.0 9.2E-38 3.1E-42 346.4 18.3 259 637-903 16-311 (351)
226 3pfq_A PKC-B, PKC-beta, protei 100.0 4.2E-38 1.4E-42 376.2 16.6 247 636-898 339-587 (674)
227 2h6d_A 5'-AMP-activated protei 100.0 5.8E-38 2E-42 335.6 15.9 250 637-903 10-261 (276)
228 1cm8_A Phosphorylated MAP kina 100.0 1.1E-37 3.6E-42 347.1 18.4 254 637-903 24-307 (367)
229 3rp9_A Mitogen-activated prote 100.0 1E-37 3.5E-42 358.8 18.8 195 637-840 52-280 (458)
230 2h8h_A Proto-oncogene tyrosine 100.0 4.1E-38 1.4E-42 367.7 15.6 256 636-910 265-523 (535)
231 2j7t_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 341.4 14.6 253 636-903 17-275 (302)
232 3byv_A Rhoptry kinase; malaria 100.0 3.6E-38 1.2E-42 352.8 14.5 245 637-903 72-359 (377)
233 2a19_B Interferon-induced, dou 100.0 1.2E-37 4.1E-42 334.5 17.9 248 636-909 9-273 (284)
234 2xrw_A Mitogen-activated prote 100.0 4.8E-37 1.7E-41 342.8 23.4 255 637-903 24-318 (371)
235 3ll6_A Cyclin G-associated kin 100.0 5.6E-38 1.9E-42 346.0 15.5 255 637-910 27-308 (337)
236 2wei_A Calmodulin-domain prote 100.0 1.8E-37 6.2E-42 333.7 19.0 255 634-903 18-276 (287)
237 1u46_A ACK-1, activated CDC42 100.0 7.2E-38 2.5E-42 337.6 15.6 259 637-909 17-283 (291)
238 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-37 4.3E-42 341.6 17.7 253 635-903 21-286 (326)
239 1vzo_A Ribosomal protein S6 ki 100.0 1.3E-38 4.4E-43 353.1 9.7 256 638-904 54-322 (355)
240 4fl3_A Tyrosine-protein kinase 100.0 1.3E-37 4.5E-42 369.3 18.6 250 644-911 375-632 (635)
241 3eqc_A Dual specificity mitoge 100.0 6.6E-38 2.3E-42 348.8 14.8 255 637-903 32-324 (360)
242 2w1i_A JAK2; chromosomal rearr 100.0 8.9E-38 3.1E-42 342.6 15.4 262 637-911 40-323 (326)
243 2wtk_C Serine/threonine-protei 100.0 5.1E-37 1.7E-41 333.4 20.6 253 637-903 4-263 (305)
244 2vwi_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 337.2 16.2 258 635-903 12-287 (303)
245 3o6n_A APL1; leucine-rich repe 100.0 1E-36 3.6E-41 343.0 23.6 311 107-483 43-353 (390)
246 3sv0_A Casein kinase I-like; t 100.0 2.1E-37 7.3E-42 354.6 18.2 261 637-911 6-279 (483)
247 3nsz_A CK II alpha, casein kin 100.0 8.4E-37 2.9E-41 335.6 21.8 250 637-903 35-319 (330)
248 4e7w_A Glycogen synthase kinas 100.0 2.9E-37 1E-41 347.0 18.2 255 637-903 39-321 (394)
249 3pg1_A Mitogen-activated prote 100.0 1.4E-37 4.9E-42 346.4 15.4 269 628-903 12-316 (362)
250 3oja_B Anopheles plasmodium-re 100.0 1.2E-36 4E-41 361.5 23.9 311 108-484 50-360 (597)
251 2pml_X PFPK7, Ser/Thr protein 100.0 1.7E-37 5.7E-42 344.0 14.5 256 637-903 30-322 (348)
252 2fst_X Mitogen-activated prote 100.0 1.8E-37 6E-42 344.9 14.1 254 637-903 28-311 (367)
253 3kvw_A DYRK2, dual specificity 100.0 1.2E-36 4E-41 345.7 20.9 196 637-845 96-300 (429)
254 1zy4_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 331.3 18.7 251 636-903 4-283 (303)
255 3eb0_A Putative uncharacterize 100.0 8.1E-37 2.8E-41 342.7 18.9 257 634-903 3-321 (383)
256 3e3p_A Protein kinase, putativ 100.0 9.8E-37 3.3E-41 339.5 19.4 263 631-903 16-314 (360)
257 3fme_A Dual specificity mitoge 100.0 3.2E-37 1.1E-41 332.3 14.8 255 637-903 6-266 (290)
258 1wak_A Serine/threonine-protei 100.0 1.3E-36 4.3E-41 343.4 20.2 255 637-903 36-391 (397)
259 3qyz_A Mitogen-activated prote 100.0 7.7E-37 2.6E-41 340.5 18.0 256 637-903 26-313 (364)
260 3cek_A Dual specificity protei 100.0 1.3E-36 4.5E-41 331.4 18.6 250 636-903 26-292 (313)
261 1j1b_A Glycogen synthase kinas 100.0 1.3E-36 4.4E-41 344.7 19.0 253 638-903 54-336 (420)
262 3an0_A Dual specificity mitoge 100.0 6.4E-37 2.2E-41 338.1 16.1 255 636-903 49-310 (340)
263 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.8E-37 6.2E-42 339.3 11.5 258 636-910 31-302 (319)
264 1blx_A Cyclin-dependent kinase 100.0 1.5E-36 5.2E-41 333.0 18.9 260 636-903 9-296 (326)
265 3fhr_A MAP kinase-activated pr 100.0 1.1E-36 3.8E-41 335.0 17.3 253 636-903 26-287 (336)
266 4exu_A Mitogen-activated prote 100.0 1.2E-36 4E-41 339.7 17.7 253 637-903 41-323 (371)
267 3o6n_A APL1; leucine-rich repe 100.0 1.7E-36 5.8E-41 341.3 18.9 334 180-556 44-377 (390)
268 2i6l_A Mitogen-activated prote 100.0 1.6E-36 5.4E-41 331.8 17.5 255 637-903 10-305 (320)
269 1z57_A Dual specificity protei 100.0 6E-36 2E-40 330.0 22.0 254 637-903 13-328 (339)
270 2j0j_A Focal adhesion kinase 1 100.0 1.7E-36 5.8E-41 361.2 18.7 257 637-911 389-652 (656)
271 3rgf_A Cyclin-dependent kinase 100.0 7.3E-37 2.5E-41 345.8 14.5 199 637-845 19-237 (405)
272 2b9h_A MAP kinase FUS3, mitoge 100.0 2.9E-36 1E-40 334.7 18.5 256 637-903 10-305 (353)
273 3aln_A Dual specificity mitoge 100.0 1.4E-36 4.6E-41 333.5 15.3 256 637-903 21-285 (327)
274 2rio_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 342.6 19.1 248 638-903 15-295 (434)
275 3coi_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 334.1 18.3 252 637-903 23-305 (353)
276 3qa8_A MGC80376 protein; kinas 100.0 1.6E-36 5.4E-41 353.9 16.4 257 637-900 13-294 (676)
277 2iwi_A Serine/threonine-protei 100.0 1.9E-36 6.5E-41 330.0 16.0 248 633-903 26-283 (312)
278 3oja_B Anopheles plasmodium-re 100.0 2.8E-36 9.7E-41 358.2 18.9 335 180-557 50-384 (597)
279 3a99_A Proto-oncogene serine/t 100.0 7.4E-37 2.5E-41 334.2 11.1 247 634-903 39-293 (320)
280 2vx3_A Dual specificity tyrosi 100.0 1.7E-35 5.8E-40 331.8 22.2 199 636-845 52-259 (382)
281 4fcg_A Uncharacterized protein 100.0 7.1E-37 2.4E-41 334.7 10.5 291 33-361 23-313 (328)
282 3p23_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40 336.6 19.3 248 637-903 23-283 (432)
283 2eu9_A Dual specificity protei 100.0 2.4E-35 8.2E-40 327.5 21.0 254 637-903 18-333 (355)
284 1q8y_A SR protein kinase; tran 100.0 1.2E-35 4.1E-40 332.4 18.4 251 637-903 18-333 (373)
285 3uqc_A Probable conserved tran 100.0 2.2E-35 7.5E-40 316.4 19.6 234 637-909 30-264 (286)
286 4fmz_A Internalin; leucine ric 100.0 7E-35 2.4E-39 322.7 23.6 306 106-458 41-346 (347)
287 2dyl_A Dual specificity mitoge 100.0 6.1E-36 2.1E-40 327.0 14.8 253 637-903 24-283 (318)
288 4fmz_A Internalin; leucine ric 100.0 1.3E-34 4.3E-39 320.7 24.2 306 153-505 40-345 (347)
289 2pzi_A Probable serine/threoni 100.0 9E-35 3.1E-39 350.0 19.5 242 637-910 79-328 (681)
290 3m2w_A MAP kinase-activated pr 100.0 2.1E-34 7E-39 311.7 19.3 231 637-903 16-256 (299)
291 1ogq_A PGIP-2, polygalacturona 100.0 4.8E-35 1.6E-39 318.3 10.9 252 109-387 50-306 (313)
292 1z7x_W Ribonuclease inhibitor; 100.0 3E-37 1E-41 355.8 -10.9 383 109-511 3-445 (461)
293 3dzo_A Rhoptry kinase domain; 100.0 6.3E-34 2.2E-38 321.8 16.5 244 638-903 78-363 (413)
294 2ft3_A Biglycan; proteoglycan, 100.0 3E-33 1E-37 307.4 20.9 288 134-480 34-331 (332)
295 1z7x_W Ribonuclease inhibitor; 100.0 3.7E-37 1.3E-41 355.1 -10.7 379 133-531 3-441 (461)
296 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-33 1.1E-37 307.1 20.6 267 254-528 55-331 (332)
297 2vuw_A Serine/threonine-protei 100.0 1.3E-34 4.3E-39 319.0 8.6 246 637-902 19-329 (336)
298 1xku_A Decorin; proteoglycan, 100.0 1.1E-32 3.7E-37 302.7 23.7 291 134-480 32-330 (330)
299 1xku_A Decorin; proteoglycan, 100.0 1.7E-32 5.9E-37 301.1 23.8 270 206-504 53-330 (330)
300 3ogk_B Coronatine-insensitive 100.0 5.6E-35 1.9E-39 348.1 -4.3 448 72-527 41-548 (592)
301 2z80_A TOLL-like receptor 2, v 100.0 2.3E-31 8E-36 294.9 14.4 260 109-412 52-316 (353)
302 2z66_A Variable lymphocyte rec 100.0 3.9E-31 1.3E-35 287.0 13.1 250 73-338 7-261 (306)
303 3ogk_B Coronatine-insensitive 100.0 5.7E-33 2E-37 330.7 -5.5 407 124-532 64-528 (592)
304 2z80_A TOLL-like receptor 2, v 100.0 1.9E-30 6.7E-35 287.5 14.2 261 254-534 53-318 (353)
305 2z66_A Variable lymphocyte rec 100.0 1.5E-29 5E-34 274.6 18.4 241 201-442 48-295 (306)
306 4fcg_A Uncharacterized protein 100.0 2.6E-29 8.8E-34 274.7 16.9 298 38-387 13-315 (328)
307 1wwl_A Monocyte differentiatio 100.0 1.7E-30 5.8E-35 282.5 6.1 250 129-411 39-310 (312)
308 3g06_A SSPH2 (leucine-rich rep 100.0 3.8E-29 1.3E-33 293.9 15.9 268 110-445 41-308 (622)
309 3zyi_A Leucine-rich repeat-con 100.0 1.1E-28 3.7E-33 283.1 19.1 249 255-531 56-304 (452)
310 1wwl_A Monocyte differentiatio 100.0 1.1E-29 3.9E-34 276.0 9.8 250 201-483 39-310 (312)
311 3zyj_A Leucine-rich repeat-con 100.0 1.1E-28 3.8E-33 281.9 18.4 249 255-531 45-293 (440)
312 1ozn_A Reticulon 4 receptor; N 100.0 7.8E-29 2.7E-33 265.9 16.1 224 136-386 14-238 (285)
313 3zyi_A Leucine-rich repeat-con 100.0 1.8E-28 6.1E-33 281.2 20.1 228 109-361 75-302 (452)
314 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-28 4.4E-33 264.2 17.3 205 254-458 33-238 (285)
315 2p1m_B Transport inhibitor res 100.0 1.1E-31 3.8E-36 319.8 -8.5 447 72-528 34-542 (594)
316 3zyj_A Leucine-rich repeat-con 100.0 3E-28 1E-32 278.3 19.8 227 109-360 64-290 (440)
317 3o53_A Protein LRIM1, AGAP0063 100.0 1.3E-29 4.5E-34 276.1 7.8 237 251-501 32-270 (317)
318 3o53_A Protein LRIM1, AGAP0063 100.0 2.3E-29 7.7E-34 274.3 6.3 264 209-486 14-280 (317)
319 3g06_A SSPH2 (leucine-rich rep 99.9 4.8E-27 1.6E-31 276.1 23.7 269 157-493 40-308 (622)
320 3oja_A Leucine-rich immune mol 99.9 2.9E-28 9.9E-33 281.0 9.2 234 254-525 35-270 (487)
321 2o6q_A Variable lymphocyte rec 99.9 6.7E-27 2.3E-31 248.5 18.1 216 71-338 3-218 (270)
322 4azs_A Methyltransferase WBDD; 99.9 1.4E-28 4.9E-33 287.3 5.5 188 646-843 242-437 (569)
323 3oja_A Leucine-rich immune mol 99.9 6.9E-28 2.4E-32 277.8 10.6 239 225-501 30-270 (487)
324 2p1m_B Transport inhibitor res 99.9 3.1E-29 1.1E-33 298.6 -8.4 396 106-505 102-543 (594)
325 2z62_A TOLL-like receptor 4, v 99.9 1.2E-25 4E-30 239.9 18.8 210 326-536 29-243 (276)
326 2z62_A TOLL-like receptor 4, v 99.9 6.2E-26 2.1E-30 242.0 16.1 205 110-338 29-237 (276)
327 3rfs_A Internalin B, repeat mo 99.9 3.6E-25 1.2E-29 235.4 15.4 229 276-517 18-246 (272)
328 3rfs_A Internalin B, repeat mo 99.9 1.5E-25 5.1E-30 238.3 10.1 186 177-371 59-244 (272)
329 2o6q_A Variable lymphocyte rec 99.9 2.5E-24 8.6E-29 228.6 18.8 203 159-364 18-220 (270)
330 1p9a_G Platelet glycoprotein I 99.9 2.8E-24 9.6E-29 230.3 16.4 203 105-338 6-208 (290)
331 1p9a_G Platelet glycoprotein I 99.9 4.8E-24 1.6E-28 228.5 17.5 205 297-532 6-210 (290)
332 4glp_A Monocyte differentiatio 99.9 1.6E-24 5.6E-29 235.0 14.1 199 158-362 92-307 (310)
333 3m19_A Variable lymphocyte rec 99.9 2.7E-24 9.1E-29 225.8 15.2 191 71-291 3-193 (251)
334 3en9_A Glycoprotease, O-sialog 99.9 6.5E-25 2.2E-29 255.0 9.5 187 641-844 339-538 (540)
335 3goz_A Leucine-rich repeat-con 99.9 1.7E-25 5.7E-30 248.5 3.2 260 210-489 3-304 (362)
336 2ast_B S-phase kinase-associat 99.9 2.6E-26 8.8E-31 252.6 -3.7 270 71-371 35-315 (336)
337 3goz_A Leucine-rich repeat-con 99.9 2E-25 6.8E-30 247.9 2.5 255 258-532 3-299 (362)
338 2ca6_A RAN GTPase-activating p 99.9 2.9E-25 1E-29 249.0 1.3 241 293-533 24-319 (386)
339 2xwt_C Thyrotropin receptor; s 99.9 2.5E-23 8.4E-28 216.7 14.9 178 110-290 32-218 (239)
340 2ca6_A RAN GTPase-activating p 99.9 1.5E-25 5E-30 251.5 -2.8 273 136-437 12-319 (386)
341 2ast_B S-phase kinase-associat 99.9 4.7E-25 1.6E-29 242.5 1.4 252 135-418 49-314 (336)
342 2xwt_C Thyrotropin receptor; s 99.9 2.8E-23 9.7E-28 216.2 13.9 198 302-526 32-235 (239)
343 4glp_A Monocyte differentiatio 99.9 1.6E-23 5.6E-28 227.2 11.2 226 108-339 63-308 (310)
344 1h6u_A Internalin H; cell adhe 99.9 1.1E-22 3.7E-27 220.1 16.0 214 277-508 19-232 (308)
345 3m19_A Variable lymphocyte rec 99.9 1.1E-22 3.9E-27 213.3 15.6 181 351-534 16-196 (251)
346 2o6s_A Variable lymphocyte rec 99.9 2.3E-22 8E-27 204.5 15.4 182 73-276 7-188 (208)
347 1h6u_A Internalin H; cell adhe 99.9 1.1E-22 3.6E-27 220.2 12.9 192 107-314 39-230 (308)
348 4ay9_X Follicle-stimulating ho 99.9 6.7E-22 2.3E-26 218.3 14.2 98 423-525 156-254 (350)
349 3cvr_A Invasion plasmid antige 99.9 2.4E-22 8.1E-27 233.2 10.3 193 110-347 60-252 (571)
350 4ay9_X Follicle-stimulating ho 99.9 2.6E-21 8.8E-26 213.6 17.2 221 230-455 31-256 (350)
351 1zar_A RIO2 kinase; serine kin 99.9 6.9E-22 2.4E-26 210.2 11.0 155 632-817 84-252 (282)
352 2o6s_A Variable lymphocyte rec 99.8 8.4E-21 2.9E-25 192.9 16.4 180 113-302 11-190 (208)
353 3cvr_A Invasion plasmid antige 99.8 2.8E-21 9.6E-26 224.2 12.6 188 302-517 60-254 (571)
354 4b8c_D Glucose-repressible alc 99.8 6.2E-22 2.1E-26 238.5 4.7 259 34-338 129-404 (727)
355 1m9s_A Internalin B; cell inva 99.8 1.2E-20 4.1E-25 221.5 9.6 193 111-319 23-215 (605)
356 1h6t_A Internalin B; cell adhe 99.8 7.9E-20 2.7E-24 195.8 14.7 191 276-482 23-213 (291)
357 2xot_A Amphoterin-induced prot 99.8 3.2E-20 1.1E-24 205.7 11.0 157 375-531 41-203 (361)
358 3e6j_A Variable lymphocyte rec 99.8 1.4E-19 4.6E-24 186.7 14.9 158 69-242 15-172 (229)
359 1m9s_A Internalin B; cell inva 99.8 1.8E-20 6E-25 220.1 9.0 193 132-340 20-212 (605)
360 2v70_A SLIT-2, SLIT homolog 2 99.8 7.6E-20 2.6E-24 187.3 12.3 156 376-534 14-170 (220)
361 2v9t_B SLIT homolog 2 protein 99.8 7.4E-20 2.5E-24 187.4 11.9 153 376-531 14-166 (220)
362 1h6t_A Internalin B; cell adhe 99.8 7.5E-20 2.6E-24 196.0 10.7 192 229-460 24-215 (291)
363 1dce_A Protein (RAB geranylger 99.8 2.5E-21 8.7E-26 225.9 -2.5 201 226-484 346-548 (567)
364 3e6j_A Variable lymphocyte rec 99.8 4.2E-19 1.4E-23 183.1 13.3 156 375-534 21-176 (229)
365 1dce_A Protein (RAB geranylger 99.8 5.3E-21 1.8E-25 223.2 -1.9 202 202-437 346-549 (567)
366 2xot_A Amphoterin-induced prot 99.8 1.9E-19 6.6E-24 199.3 10.5 108 111-218 41-149 (361)
367 2v70_A SLIT-2, SLIT homolog 2 99.8 5.9E-19 2E-23 180.6 13.1 131 136-266 35-166 (220)
368 2v9t_B SLIT homolog 2 protein 99.8 6.3E-19 2.2E-23 180.4 13.3 134 109-242 32-165 (220)
369 1xeu_A Internalin C; cellular 99.8 1.3E-18 4.5E-23 183.3 13.3 171 275-460 17-187 (263)
370 4b8c_D Glucose-repressible alc 99.8 1.6E-19 5.5E-24 217.5 6.4 224 109-363 173-405 (727)
371 3sb4_A Hypothetical leucine ri 99.8 6.1E-19 2.1E-23 192.8 7.6 217 300-523 100-327 (329)
372 4ezg_A Putative uncharacterize 99.8 1.3E-18 4.6E-23 174.8 9.5 153 106-265 41-193 (197)
373 1xeu_A Internalin C; cellular 99.7 1.7E-18 5.9E-23 182.3 9.6 149 249-410 37-185 (263)
374 1zth_A RIO1 serine protein kin 99.7 5.6E-18 1.9E-22 177.9 12.6 141 639-794 48-219 (258)
375 3sb4_A Hypothetical leucine ri 99.7 1E-18 3.5E-23 190.9 7.3 265 228-500 48-328 (329)
376 4ezg_A Putative uncharacterize 99.7 4.3E-18 1.5E-22 171.2 11.0 154 370-531 41-195 (197)
377 1w8a_A SLIT protein; signaling 99.7 3.9E-17 1.3E-21 163.3 12.5 110 374-483 30-140 (192)
378 1w8a_A SLIT protein; signaling 99.7 2.3E-17 7.8E-22 164.9 10.5 172 376-554 11-184 (192)
379 2ell_A Acidic leucine-rich nuc 99.7 1.8E-16 6.2E-21 154.8 9.9 132 133-266 24-160 (168)
380 2ell_A Acidic leucine-rich nuc 99.7 2.4E-16 8.1E-21 154.0 10.6 133 397-531 24-161 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 3.5E-16 1.2E-20 156.3 10.6 109 422-531 32-140 (193)
382 2je0_A Acidic leucine-rich nuc 99.6 3.4E-16 1.2E-20 149.5 8.5 127 397-525 17-148 (149)
383 4fdw_A Leucine rich hypothetic 99.6 1.3E-15 4.5E-20 169.8 14.5 264 229-529 113-382 (401)
384 2o6r_A Variable lymphocyte rec 99.6 6.4E-16 2.2E-20 152.3 10.1 132 400-534 10-141 (177)
385 2o6r_A Variable lymphocyte rec 99.6 1.5E-15 5E-20 149.7 12.6 134 73-221 7-140 (177)
386 2je0_A Acidic leucine-rich nuc 99.6 4.2E-16 1.4E-20 148.9 8.0 127 373-501 17-148 (149)
387 4fdw_A Leucine rich hypothetic 99.6 2.6E-15 9E-20 167.4 15.4 270 205-506 113-383 (401)
388 2wfh_A SLIT homolog 2 protein 99.6 1.6E-15 5.6E-20 151.4 12.3 125 114-242 15-139 (193)
389 1ds9_A Outer arm dynein; leuci 99.6 1E-17 3.6E-22 168.5 -6.5 136 106-246 15-157 (198)
390 4gyi_A RIO2 kinase; protein ki 99.6 1.8E-15 6.1E-20 164.4 10.5 143 639-795 96-266 (397)
391 1ds9_A Outer arm dynein; leuci 99.6 7.7E-17 2.6E-21 162.1 -3.1 151 373-530 18-185 (198)
392 4fs7_A Uncharacterized protein 99.6 7.4E-14 2.5E-18 156.4 19.5 316 121-477 59-374 (394)
393 4fs7_A Uncharacterized protein 99.6 9.7E-14 3.3E-18 155.4 20.5 331 101-474 63-393 (394)
394 1a9n_A U2A', U2A'; complex (nu 99.5 7.6E-15 2.6E-19 144.4 8.4 132 395-530 17-153 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 7.5E-15 2.6E-19 144.4 7.7 132 370-507 16-154 (176)
396 3g39_A Variable lymphocyte rec 99.5 5.5E-14 1.9E-18 137.2 8.7 109 423-534 11-119 (170)
397 3g39_A Variable lymphocyte rec 99.4 1.7E-13 5.8E-18 133.7 9.2 105 375-482 11-115 (170)
398 2r9u_A Variable lymphocyte rec 99.4 1.4E-13 4.9E-18 134.7 8.6 107 424-533 15-121 (174)
399 2r9u_A Variable lymphocyte rec 99.4 4.2E-13 1.4E-17 131.3 10.0 103 113-218 16-118 (174)
400 3un9_A NLR family member X1; l 99.3 6E-14 2.1E-18 154.9 -1.8 169 325-513 72-259 (372)
401 3un9_A NLR family member X1; l 99.3 4.8E-14 1.7E-18 155.7 -2.9 171 300-490 71-260 (372)
402 4gt6_A Cell surface protein; l 99.3 6.5E-11 2.2E-15 132.4 19.5 130 391-527 259-388 (394)
403 2ifg_A High affinity nerve gro 99.3 2.9E-12 9.9E-17 140.9 6.2 104 377-483 12-117 (347)
404 4gt6_A Cell surface protein; l 99.3 9.5E-11 3.2E-15 131.0 18.2 133 366-505 258-390 (394)
405 2ifg_A High affinity nerve gro 99.2 8.6E-12 2.9E-16 137.1 8.6 132 401-535 12-146 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.2 3.4E-11 1.2E-15 126.6 11.5 146 634-792 10-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 3.2E-10 1.1E-14 118.9 8.9 137 639-793 21-214 (264)
408 4h09_A Hypothetical leucine ri 99.0 6.7E-09 2.3E-13 115.3 19.1 142 368-514 212-353 (379)
409 2ra8_A Uncharacterized protein 99.0 2.4E-10 8.2E-15 124.9 5.2 83 420-504 251-341 (362)
410 4h09_A Hypothetical leucine ri 99.0 9.5E-09 3.3E-13 114.1 17.7 153 370-527 191-343 (379)
411 3dxp_A Putative acyl-COA dehyd 98.9 3.2E-09 1.1E-13 116.9 12.4 144 642-794 42-249 (359)
412 3rw6_A Nuclear RNA export fact 98.9 7.5E-12 2.6E-16 129.6 -8.3 146 71-220 76-235 (267)
413 2ra8_A Uncharacterized protein 98.9 3E-10 1E-14 124.1 2.9 83 396-480 251-341 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.8 2.5E-09 8.7E-14 114.8 6.8 183 643-844 25-287 (304)
415 3r70_A Aminoglycoside phosphot 98.6 5.2E-07 1.8E-11 97.3 15.0 138 639-795 38-239 (320)
416 3rw6_A Nuclear RNA export fact 98.5 3.8E-08 1.3E-12 101.8 2.4 105 417-523 137-257 (267)
417 4gkh_A Aminoglycoside 3'-phosp 98.4 1.6E-06 5.5E-11 91.0 13.0 136 644-793 30-223 (272)
418 1io0_A Tropomodulin; LRR prote 98.4 4.1E-08 1.4E-12 96.6 0.5 18 369-386 32-50 (185)
419 1io0_A Tropomodulin; LRR prote 98.4 7E-08 2.4E-12 95.0 1.5 43 344-386 31-78 (185)
420 3d1u_A Putative fructosamine-3 98.3 4.1E-06 1.4E-10 88.4 13.4 77 641-725 18-97 (288)
421 3tdw_A Gentamicin resistance p 98.3 6.9E-06 2.4E-10 87.8 14.9 137 643-794 24-225 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 9.5E-06 3.3E-10 88.8 13.8 147 639-795 42-245 (362)
423 3ats_A Putative uncharacterize 98.0 1.1E-05 3.8E-10 88.3 9.2 84 643-727 25-122 (357)
424 2olc_A MTR kinase, methylthior 97.8 6.4E-05 2.2E-09 83.6 11.4 79 643-723 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.8 9.4E-06 3.2E-10 77.6 3.0 83 422-504 62-150 (176)
426 2q83_A YTAA protein; 2635576, 97.8 9.4E-05 3.2E-09 80.3 11.5 141 644-793 38-252 (346)
427 3jr1_A Putative fructosamine-3 97.7 0.00018 6.1E-09 76.5 12.5 139 642-789 40-232 (312)
428 3e4g_A ATP synthase subunit S, 97.7 2.2E-05 7.5E-10 75.1 4.0 82 326-407 62-149 (176)
429 3f7w_A Putative fructosamine-3 97.5 0.00055 1.9E-08 72.2 12.2 79 639-725 16-97 (288)
430 2pyw_A Uncharacterized protein 97.4 0.00089 3E-08 74.8 13.7 76 763-840 232-312 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.2 9.8E-05 3.3E-09 72.0 2.5 89 393-481 66-169 (197)
432 1pgv_A TMD-1, tropomodulin TMD 97.2 7.2E-05 2.4E-09 72.9 1.4 85 395-479 39-136 (197)
433 3dxq_A Choline/ethanolamine ki 97.2 0.0021 7E-08 68.2 12.5 71 643-725 23-95 (301)
434 3csv_A Aminoglycoside phosphot 97.1 0.0028 9.5E-08 68.3 12.7 143 644-795 24-219 (333)
435 2ppq_A HSK, HK, homoserine kin 97.1 0.0018 6E-08 69.5 10.5 159 628-793 7-217 (322)
436 1zyl_A Hypothetical protein YI 96.9 0.0084 2.9E-07 64.2 14.5 159 628-794 11-224 (328)
437 2yle_A Protein spire homolog 1 96.9 0.0033 1.1E-07 61.4 9.8 103 723-843 33-135 (229)
438 3rfe_A Platelet glycoprotein I 96.9 0.00078 2.7E-08 61.3 5.0 57 473-531 12-69 (130)
439 3feg_A Choline/ethanolamine ki 96.9 0.0029 9.9E-08 69.0 10.1 142 643-793 55-254 (379)
440 1nw1_A Choline kinase (49.2 KD 96.8 0.002 6.9E-08 71.9 8.6 73 643-725 78-159 (429)
441 2qg7_A Ethanolamine kinase PV0 96.6 0.012 4.2E-07 65.8 12.4 74 643-725 113-188 (458)
442 3rfe_A Platelet glycoprotein I 96.5 0.0021 7.3E-08 58.4 5.1 56 425-482 12-68 (130)
443 3i1a_A Spectinomycin phosphotr 96.5 0.011 3.6E-07 63.8 11.1 32 763-794 206-237 (339)
444 3c5i_A Choline kinase; choline 96.1 0.0088 3E-07 65.3 8.0 74 643-725 38-121 (369)
445 3f2s_A CK, chetk-alpha, cholin 95.7 0.047 1.6E-06 59.7 11.4 146 644-793 58-280 (401)
446 3mes_A Choline kinase; malaria 95.2 0.06 2E-06 59.5 10.0 141 643-793 75-291 (424)
447 4ann_A ESSB; membrane protein, 93.4 0.28 9.5E-06 48.0 9.1 117 696-846 43-159 (215)
448 4ano_A ESSB; membrane protein, 91.5 0.8 2.7E-05 44.9 9.7 116 696-846 48-164 (219)
449 3g15_A CK, chetk-alpha, cholin 90.7 1 3.5E-05 49.4 10.8 29 765-793 246-280 (401)
450 2ks1_B Epidermal growth factor 77.4 0.48 1.6E-05 33.0 0.0 22 582-603 19-40 (44)
451 2l2t_A Receptor tyrosine-prote 69.7 0.69 2.4E-05 32.1 -0.7 20 584-603 20-39 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 65.8 0.7 2.4E-05 51.6 -2.1 64 641-709 145-215 (463)
453 2jwa_A Receptor tyrosine-prote 61.7 1.7 5.7E-05 30.2 -0.0 27 577-603 14-40 (44)
454 2lz0_A Uncharacterized protein 39.2 53 0.0018 27.4 5.8 42 292-334 11-52 (100)
455 3eps_A Isocitrate dehydrogenas 32.6 2.8E+02 0.0095 30.7 11.4 140 645-796 313-484 (578)
456 1iij_A ERBB-2 receptor protein 31.3 7.8 0.00027 25.4 -0.5 25 577-601 10-34 (35)
457 2lz0_A Uncharacterized protein 28.0 64 0.0022 26.9 4.5 46 265-311 8-53 (100)
458 1cja_A Protein (actin-fragmin 21.4 2E+02 0.007 29.8 7.5 135 644-793 75-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.7e-73 Score=692.18 Aligned_cols=528 Identities=32% Similarity=0.494 Sum_probs=398.4
Q ss_pred hhccCCCCHHHHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCCCccceeEecCCCCeEEEeecccccccc---ccc--
Q 039137 28 SLAISSNSAEEAHALVKWKASLEVHSRSLLHSWSLSSVNATKISPCAWSGIFCNHAERVVGINLTSISLNGT---LLE-- 102 (912)
Q Consensus 28 ~~~~~~~~~~~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~---~~~-- 102 (912)
..+.+++.++|++||++||+++. ||. .+++|+. +.|||+|.||+|+ ++||++++|++.++.|. +++
T Consensus 3 ~~~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~~------~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l 73 (768)
T 3rgz_A 3 QASPSQSLYREIHQLISFKDVLP-DKN-LLPDWSS------NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSL 73 (768)
T ss_dssp -----CCHHHHHHHHHHHHTTCS-CTT-SSTTCCT------TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHT
T ss_pred cCccccCCHHHHHHHHHHHhhCC-Ccc-cccCCCC------CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhH
Confidence 33445567889999999999997 666 8999963 3589999999999 79999999999988887 432
Q ss_pred --------------------cccCCCCCccEEEccCCcccccCCc--cccCCCCCcEEecccccccccccccc-c-----
Q 039137 103 --------------------FSFSSFPHLVYLDLYNNELFGIIPP--QISNLSNLEYLDFSANKLFGQIPSGI-G----- 154 (912)
Q Consensus 103 --------------------~~~~~l~~L~~L~L~~n~l~~~~p~--~~~~l~~L~~L~Ls~n~l~~~~p~~~-~----- 154 (912)
..|+.+++|++|||++|.++|.+|. .++++++|++|||++|.+.+.+|..+ +
T Consensus 74 ~~L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L 153 (768)
T 3rgz_A 74 LSLTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSL 153 (768)
T ss_dssp TTCTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTC
T ss_pred hccCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCC
Confidence 4688889999999999999998888 88888888888888887776665433 2
Q ss_pred --------------------------------------------cccccceeecccccccCCCCccccCcccccEEEccC
Q 039137 155 --------------------------------------------LLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDS 190 (912)
Q Consensus 155 --------------------------------------------~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 190 (912)
.+++|++|+|++|.+++.+|. ++++++|++|++++
T Consensus 154 ~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~ 232 (768)
T 3rgz_A 154 EVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISG 232 (768)
T ss_dssp SEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCS
T ss_pred CEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcC
Confidence 233444444444444444444 66666666666666
Q ss_pred CcCCCCCCccCCCCccceeeeeccCCCcC----------------------ccccccccc-cccceeecccccccCcccc
Q 039137 191 NFLNGSIPRSLGNLTHVVILYLYNNSFFG----------------------SIPQEIGNL-KSLFDLELCINQLSGAIPL 247 (912)
Q Consensus 191 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~----------------------~~p~~~~~l-~~L~~L~l~~n~l~~~~p~ 247 (912)
|++++.+|..++++++|++|+|++|.+.+ .+|..+.++ ++|++|++++|++++.+|.
T Consensus 233 n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~ 312 (768)
T 3rgz_A 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPP 312 (768)
T ss_dssp SCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCG
T ss_pred CcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccch
Confidence 66665555555555444444444444332 333333332 5555555555555544444
Q ss_pred ccccccccceeeeccccC-------------------------cccCCcccCCc--------------------------
Q 039137 248 SISNLTNLRFLFLYHNEL-------------------------SGIIPQEIGNL-------------------------- 276 (912)
Q Consensus 248 ~~~~l~~L~~L~L~~N~l-------------------------~~~~~~~l~~l-------------------------- 276 (912)
.|+++++|++|+|++|++ ++.+|..+.++
T Consensus 313 ~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~ 392 (768)
T 3rgz_A 313 FFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNP 392 (768)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCST
T ss_pred HHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcc
Confidence 444444444444444444 43344333322
Q ss_pred -cccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEe
Q 039137 277 -KKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355 (912)
Q Consensus 277 -~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 355 (912)
++|++|++++|++++.+|..|.++++|++|+|++|.+++.+|..|+.+++|+.|+|++|.+.+..|..+..+++|+.|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 472 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLI 472 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEE
Confidence 2344444444444445666667777777777777777777777788888888888888888878888888888888888
Q ss_pred ccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCc
Q 039137 356 VSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435 (912)
Q Consensus 356 Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 435 (912)
+++|++++.+|..++.+++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..+..+++|++|+|++|++++
T Consensus 473 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g 552 (768)
T 3rgz_A 473 LDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNG 552 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred ecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCC
Confidence 88888888888888888888888888888888888888888888888888888888888888888889999998888876
Q ss_pred ccccc----------------------------------------------------------------------ccccc
Q 039137 436 FVPES----------------------------------------------------------------------LGSLV 445 (912)
Q Consensus 436 ~~~~~----------------------------------------------------------------------~~~l~ 445 (912)
.+|.. +..++
T Consensus 553 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~ 632 (768)
T 3rgz_A 553 TIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNG 632 (768)
T ss_dssp BCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSB
T ss_pred cCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccc
Confidence 66643 33356
Q ss_pred cccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEcc
Q 039137 446 KLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDIS 525 (912)
Q Consensus 446 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls 525 (912)
+|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..++++++|+.|||++|+++|.+|..+..++.|++||++
T Consensus 633 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls 712 (768)
T 3rgz_A 633 SMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712 (768)
T ss_dssp CCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECC
T ss_pred cccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCccCCCCchhhhccCCcccCCcCCCCcccccc
Q 039137 526 YNKLEGQIPNSTTFRDAPLEALQGNKGLYGDIRGFPSCMSYK 567 (912)
Q Consensus 526 ~N~l~~~~~~~~~~~~~~~~~l~~n~~~~~~~~~~~~c~~~~ 567 (912)
+|+++|.+|....|...+...+.||+++||.+.. +|....
T Consensus 713 ~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~--~C~~~~ 752 (768)
T 3rgz_A 713 NNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP--RCDPSN 752 (768)
T ss_dssp SSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC--CCCSCC
T ss_pred CCcccccCCCchhhccCCHHHhcCCchhcCCCCc--CCCCCc
Confidence 9999999999999999999999999999998754 675433
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.5e-60 Score=564.64 Aligned_cols=480 Identities=20% Similarity=0.256 Sum_probs=412.1
Q ss_pred CCCHHHHHHHHHHHHhcccCCcccC-------CCcccCCCCCCCCCCCcc---ceeEecCCCCeEEEeeccccccccccc
Q 039137 33 SNSAEEAHALVKWKASLEVHSRSLL-------HSWSLSSVNATKISPCAW---SGIFCNHAERVVGINLTSISLNGTLLE 102 (912)
Q Consensus 33 ~~~~~~~~all~~k~~~~~~~~~~l-------~~w~~~~~~~~~~~~C~w---~gv~c~~~~~v~~l~l~~~~l~~~~~~ 102 (912)
+....|+.||.+||+++..+.+..- ++|+. ..+||.| .||+|+..+||++++|.+.++.|+++
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~------~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp- 98 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF------NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVP- 98 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC------SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEEC-
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC------CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCC-
Confidence 3445799999999999976544322 36753 3689999 99999888999999999999999987
Q ss_pred cccCCCCCccEEEccCCcc------cc------cCCccccCCCCCcEEecccccccccccccccc-ccccceeecc----
Q 039137 103 FSFSSFPHLVYLDLYNNEL------FG------IIPPQISNLSNLEYLDFSANKLFGQIPSGIGL-LTHLTVLHIS---- 165 (912)
Q Consensus 103 ~~~~~l~~L~~L~L~~n~l------~~------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~L~---- 165 (912)
.+|+++++|++|+|++|.+ .| .+|+.. +..|+ +++++|.+.+.+|..++. +.++..+++.
T Consensus 99 ~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~ 175 (636)
T 4eco_A 99 DAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSI 175 (636)
T ss_dssp GGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCC
T ss_pred hHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccc
Confidence 5799999999999999987 33 455444 56777 899999998888887763 2333333333
Q ss_pred ----------------cccccCCCCccccCcccccEEEccCCcCCCC-----------------CCccCC--CCccceee
Q 039137 166 ----------------RNWLSGSIPHEVGQLTVLNQLALDSNFLNGS-----------------IPRSLG--NLTHVVIL 210 (912)
Q Consensus 166 ----------------~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-----------------~p~~~~--~l~~L~~L 210 (912)
.|+++| +|..++++++|++|+|++|+++|. +|..++ ++++|++|
T Consensus 176 ~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 176 KKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred ccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 688998 999999999999999999999986 999999 99999999
Q ss_pred eeccCCCcCccccccccccccceeeccccc-ccC-ccccccccc------cccceeeeccccCcccCCc--ccCCccccc
Q 039137 211 YLYNNSFFGSIPQEIGNLKSLFDLELCINQ-LSG-AIPLSISNL------TNLRFLFLYHNELSGIIPQ--EIGNLKKLN 280 (912)
Q Consensus 211 ~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~~~--~l~~l~~L~ 280 (912)
+|++|.+.+.+|..++++++|++|++++|+ ++| .+|..++.+ ++|++|+|++|+++ .+|. .++++++|+
T Consensus 255 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~ 333 (636)
T 4eco_A 255 EVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLG 333 (636)
T ss_dssp EEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCC
T ss_pred EecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCC
Confidence 999999999999999999999999999998 998 899988887 99999999999999 6888 899999999
Q ss_pred hhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCC-ccEEEccCCcCcccccccCCCCC--CCCEEecc
Q 039137 281 SLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPN-LTFIDLSNNSFFGEILSDWGRCP--QLSLLDVS 357 (912)
Q Consensus 281 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~Ls 357 (912)
+|++++|+++|.+| .|..+++|++|++++|.++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|+.|+++
T Consensus 334 ~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls 410 (636)
T 4eco_A 334 MLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFS 410 (636)
T ss_dssp EEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECC
T ss_pred EEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECc
Confidence 99999999998888 8999999999999999999 67778999999 999999999998 6777777655 89999999
Q ss_pred CCccccccccccc-------ccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccc-cccc-------cc
Q 039137 358 INNISGSIPLEIG-------ESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRE-LGSL-------IN 422 (912)
Q Consensus 358 ~N~l~~~~~~~~~-------~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~l-------~~ 422 (912)
+|++.+.+|..+. .+.+|++|+|++|++++..+..+..+++|+.|+|++|+++ .+|.. +... ++
T Consensus 411 ~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~ 489 (636)
T 4eco_A 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYL 489 (636)
T ss_dssp SSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGG
T ss_pred CCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCC
Confidence 9999999998888 7889999999999999544445567899999999999999 55544 3332 38
Q ss_pred cccccccCcccCcccccccc--ccccccEEEecccccccccchhhhcccccceeec------cccccCcccccccccccc
Q 039137 423 LEYLDLSANNLSNFVPESLG--SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL------SHNFLGEKISSRICRMES 494 (912)
Q Consensus 423 L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L------s~N~l~~~~~~~~~~l~~ 494 (912)
|++|+|++|+++. +|..+. .+++|+.|+|++|++++ +|..+..+++|++|+| ++|++.+.+|..+..+++
T Consensus 490 L~~L~Ls~N~l~~-lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~ 567 (636)
T 4eco_A 490 LTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPS 567 (636)
T ss_dssp CCEEECCSSCCCB-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSS
T ss_pred ccEEECcCCcCCc-cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCC
Confidence 9999999999995 677776 89999999999999997 8999999999999999 568888999999999999
Q ss_pred cccccccCccccCCCcccccccccceEEEccCCccccCC
Q 039137 495 LEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQI 533 (912)
Q Consensus 495 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 533 (912)
|+.|+|++|+| +.+|..+. ++|+.|++++|++.+..
T Consensus 568 L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 568 LTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISID 603 (636)
T ss_dssp CCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEE
T ss_pred CCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCcccc
Confidence 99999999999 45676665 79999999999998643
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.2e-57 Score=552.90 Aligned_cols=476 Identities=20% Similarity=0.245 Sum_probs=308.4
Q ss_pred CCCHHHHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCC--Ccc------------ceeEecCCCCeEEEeeccccccc
Q 039137 33 SNSAEEAHALVKWKASLEVHSRSLLHSWSLSSVNATKISP--CAW------------SGIFCNHAERVVGINLTSISLNG 98 (912)
Q Consensus 33 ~~~~~~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~--C~w------------~gv~c~~~~~v~~l~l~~~~l~~ 98 (912)
++..+|++||++||+++. +| +|+.+.++. ..+| |.| .||+|+..+||++++|.++++.|
T Consensus 265 ~~~~~d~~ALl~~k~~l~-~~-----~W~~~~~~~-~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALD-GK-----NWRYYSGTI-NNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CHHHHHHHHHHHHHHHTT-GG-----GCCCCCSSC-SSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred ccchHHHHHHHHHHHHcC-CC-----CCCcCCCcc-cccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 455689999999999995 44 797654221 1355 999 99999988999999999999999
Q ss_pred cccccccCCCCCccEEEc-cCCcccccCCccc------------------------------------------------
Q 039137 99 TLLEFSFSSFPHLVYLDL-YNNELFGIIPPQI------------------------------------------------ 129 (912)
Q Consensus 99 ~~~~~~~~~l~~L~~L~L-~~n~l~~~~p~~~------------------------------------------------ 129 (912)
.++ .+|++|++|++|+| ++|.+.|..|-..
T Consensus 338 ~ip-~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 338 RVP-DAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp EEC-GGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred cCc-hHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 986 57999999999999 8898888744221
Q ss_pred ---cCCCCCcEEeccc--cccccccccccccccccceeecccccccC-----------------CCCcccc--CcccccE
Q 039137 130 ---SNLSNLEYLDFSA--NKLFGQIPSGIGLLTHLTVLHISRNWLSG-----------------SIPHEVG--QLTVLNQ 185 (912)
Q Consensus 130 ---~~l~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-----------------~~p~~~~--~l~~L~~ 185 (912)
.....++.+.+.. |++++ +|..|+++++|++|+|++|.++| .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 1112233333333 66766 77777777777777777777776 2677766 7777777
Q ss_pred EEccCCcCCCCCCccCCCCccceeeeeccCC-CcC-cccccccccc-------ccceeecccccccCcccc--ccccccc
Q 039137 186 LALDSNFLNGSIPRSLGNLTHVVILYLYNNS-FFG-SIPQEIGNLK-------SLFDLELCINQLSGAIPL--SISNLTN 254 (912)
Q Consensus 186 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~-~~p~~~~~l~-------~L~~L~l~~n~l~~~~p~--~~~~l~~ 254 (912)
|+|++|.+.+.+|..|+++++|++|+|++|+ ++| .+|..+++++ +|+.|++++|+++ .+|. .++++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 7777777777777777777777777777776 666 6666666555 7777777777776 6666 6777777
Q ss_pred cceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccc-cceEecccccccCCCCcccCCCCC--ccEEE
Q 039137 255 LRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTD-LVKLRLNQNYLTGNISETFGTYPN--LTFID 331 (912)
Q Consensus 255 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~--L~~L~ 331 (912)
|+.|+|++|+++ .+| .|+++++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|+
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 777777777776 455 6667777777777777776 66666666666 777777777766 45555555543 77777
Q ss_pred ccCCcCccccccc---CC--CCCCCCEEeccCCcccccccccc-cccccccEEEccCccccCCCCccccc--------cc
Q 039137 332 LSNNSFFGEILSD---WG--RCPQLSLLDVSINNISGSIPLEI-GESLQLQYLDLSSNYIVGEIPTQLGN--------II 397 (912)
Q Consensus 332 Ls~N~l~~~~~~~---~~--~l~~L~~L~Ls~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~~~~l~~--------l~ 397 (912)
|++|++.+.+|.. +. .+++|+.|++++|++. .+|..+ ..+++|+.|+|++|+++ .+|..+.. ++
T Consensus 651 Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~ 728 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTY 728 (876)
T ss_dssp CCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGG
T ss_pred CcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccC
Confidence 7777766554422 12 2346666666666666 334333 35666666666666666 44443322 22
Q ss_pred cccEEEccCCcccCCCccccc--cccccccccccCcccCccccccccccccccEEEecc------cccccccchhhhccc
Q 039137 398 YLNRLSLSGNKLSGCIPRELG--SLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSH------NKLSQQIPIELDNLI 469 (912)
Q Consensus 398 ~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~------N~l~~~~~~~~~~l~ 469 (912)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..+.+++
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~ 806 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCP 806 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCS
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCC
Confidence 6666666666666 4555554 66666666666666665 455566666666666654 445555555555555
Q ss_pred ccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCcc
Q 039137 470 HLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKL 529 (912)
Q Consensus 470 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l 529 (912)
+|+.|+|++|+| +.+|..+. ++|+.|+|++|++..+.+..|.....+..+.+.+|++
T Consensus 807 ~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 807 SLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp SCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred CCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 566666666655 44444443 3555555555555555545554444444455555544
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.8e-57 Score=550.61 Aligned_cols=444 Identities=33% Similarity=0.480 Sum_probs=355.3
Q ss_pred CeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEecccccccc-----------------
Q 039137 85 RVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFG----------------- 147 (912)
Q Consensus 85 ~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~----------------- 147 (912)
....+++..+.+.+.++. ++++++|++|+|++|++++.+|..|+++++|++|+|++|++++
T Consensus 201 ~L~~L~Ls~n~l~~~~~~--l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~ 278 (768)
T 3rgz_A 201 NLEFLDVSSNNFSTGIPF--LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAE 278 (768)
T ss_dssp TCCEEECCSSCCCSCCCB--CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCS
T ss_pred cCCEEECcCCcCCCCCcc--cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcC
Confidence 344555555555554332 5566666666666666666566556555555555555555544
Q ss_pred -----ccccccccc-cccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCcc-CCCCccceeeeeccCCCcCc
Q 039137 148 -----QIPSGIGLL-THLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRS-LGNLTHVVILYLYNNSFFGS 220 (912)
Q Consensus 148 -----~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~ 220 (912)
.+|..++.+ ++|++|+|++|.+++.+|..|+++++|++|++++|+++|.+|.. +.++++|++|++++|.+++.
T Consensus 279 n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~ 358 (768)
T 3rgz_A 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGE 358 (768)
T ss_dssp SEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEEC
T ss_pred CccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCcc
Confidence 455555443 55666666666666566666666666666666666666555544 56666666666666666666
Q ss_pred ccccccccc-ccceeecccccccCcccccccc--ccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCcccc
Q 039137 221 IPQEIGNLK-SLFDLELCINQLSGAIPLSISN--LTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSF 297 (912)
Q Consensus 221 ~p~~~~~l~-~L~~L~l~~n~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~ 297 (912)
+|..+.+++ +|+.|++++|++++.+|..+.. +++|++|++++|++++.+|..+.++++|++|+|++|++++.+|..|
T Consensus 359 ~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l 438 (768)
T 3rgz_A 359 LPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSL 438 (768)
T ss_dssp CCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGG
T ss_pred ccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHH
Confidence 666666665 6666666666666666666655 6778888888888888899999999999999999999999999999
Q ss_pred ccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccE
Q 039137 298 RNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQY 377 (912)
Q Consensus 298 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~ 377 (912)
..+++|+.|++++|.+++.+|..+..+++|++|+|++|++++..|..++.+++|+.|++++|++++.+|..++.+++|++
T Consensus 439 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 518 (768)
T 3rgz_A 439 GSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred hcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCccccCCCCccccccccccEEEccCCcccCCCcccc----------------------------------------
Q 039137 378 LDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPREL---------------------------------------- 417 (912)
Q Consensus 378 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~---------------------------------------- 417 (912)
|+|++|++++.+|..+.++++|+.|++++|+++|.+|..+
T Consensus 519 L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (768)
T 3rgz_A 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQG 598 (768)
T ss_dssp EECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTT
T ss_pred EECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999998777544
Q ss_pred ------------------------------ccccccccccccCcccCccccccccccccccEEEecccccccccchhhhc
Q 039137 418 ------------------------------GSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDN 467 (912)
Q Consensus 418 ------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 467 (912)
..+++|++|||++|++++.+|..|+.++.|+.|+|++|+++|.+|..+++
T Consensus 599 ~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~ 678 (768)
T 3rgz_A 599 IRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGD 678 (768)
T ss_dssp CCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred ccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhC
Confidence 33567899999999999999999999999999999999999999999999
Q ss_pred ccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCcccc
Q 039137 468 LIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 468 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 531 (912)
+++|+.|||++|+++|.+|..++.+++|+.||+++|+|+|.+|.. ..+..+....+.+|+--|
T Consensus 679 L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lc 741 (768)
T 3rgz_A 679 LRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLC 741 (768)
T ss_dssp CTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEE
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhc
Confidence 999999999999999999999999999999999999999999964 233444455677887444
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-53 Score=510.50 Aligned_cols=468 Identities=20% Similarity=0.188 Sum_probs=381.5
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceee
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (912)
..++.++++.+.+.+ +.+.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 ~~l~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 33 NSTECLEFSFNVLPT-IQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp TTCCEEECTTCCCSE-ECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CcCcEEEccCCccCc-CChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 357888999888875 4466899999999999999999999999999999999999999999988899999999999999
Q ss_pred cccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccc--eeecccccc
Q 039137 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLF--DLELCINQL 241 (912)
Q Consensus 164 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~--~L~l~~n~l 241 (912)
|++|.+++..|..++++++|++|++++|++.+..++.+..+++|++|++++|.+++..|..++.+++|+ .|++++|++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999977688999999999999999999975545566699999999999999988888999999999 889999998
Q ss_pred cCccccccccc---------------------------------------------------cccceeeeccccCcccCC
Q 039137 242 SGAIPLSISNL---------------------------------------------------TNLRFLFLYHNELSGIIP 270 (912)
Q Consensus 242 ~~~~p~~~~~l---------------------------------------------------~~L~~L~L~~N~l~~~~~ 270 (912)
++..|..+... .+|+.|++++|++++..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 87666554321 167778888888887777
Q ss_pred cccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccc-cCCCCC
Q 039137 271 QEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILS-DWGRCP 349 (912)
Q Consensus 271 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~ 349 (912)
..|.++++|++|++++|+++ .+|..+..+++|++|++++|.+++..+..+..+++|++|++++|.+.+..+. .+..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 77888888888888888887 6777788888888888888888877778888888888888888888765544 477888
Q ss_pred CCCEEeccCCcccccc--cccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcc-ccccccccccc
Q 039137 350 QLSLLDVSINNISGSI--PLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPR-ELGSLINLEYL 426 (912)
Q Consensus 350 ~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L 426 (912)
+|+.|++++|++.+.. +..++.+++|++|++++|++.+..|..+..+++|+.|++++|++++..|. .+..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 8888888888887665 66778888888888888888877777888888888888888888766554 37788888888
Q ss_pred cccCcccCccccccccccccccEEEecccccccc---cchhhhcccccceeeccccccCcccccccccccccccccccCc
Q 039137 427 DLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQ---IPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYN 503 (912)
Q Consensus 427 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N 503 (912)
++++|.+++..|..+..+++|++|+|++|++++. .+..+..+++|++|++++|++++..|..|..+++|+.|+|++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 8888888887788888888888888888888762 2356778888888888888888877888888888888888888
Q ss_pred cccCCCcccccccccceEEEccCCccccCCCCC-ccCCCCchhhhccCCccc
Q 039137 504 NLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS-TTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 504 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~l~~n~~~~ 554 (912)
++++..|..|..++.| .|++++|++++.+|.. ..+.......+.+|+-.|
T Consensus 511 ~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 511 RLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp CCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred ccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 8888888888888888 8888888888766543 122333334455665544
No 6
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.3e-52 Score=508.53 Aligned_cols=471 Identities=25% Similarity=0.253 Sum_probs=326.4
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceee
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (912)
.+++.+++.++.+.+ +.+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRR-LPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCC-CCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCC-cCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 468888998888775 4455688999999999999999988899999999999999999999855555799999999999
Q ss_pred cccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccc--cccccceeecccccc
Q 039137 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIG--NLKSLFDLELCINQL 241 (912)
Q Consensus 164 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~l~~n~l 241 (912)
|++|.+++..|..|+++++|++|++++|.+++..|..++++++|++|++++|.+++..+..++ .+++|+.|++++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 999999877778899999999999999999988888899999999999999988876666544 346777777777766
Q ss_pred cCcccccc---------------------------------------------------ccccc--cceeeeccccCccc
Q 039137 242 SGAIPLSI---------------------------------------------------SNLTN--LRFLFLYHNELSGI 268 (912)
Q Consensus 242 ~~~~p~~~---------------------------------------------------~~l~~--L~~L~L~~N~l~~~ 268 (912)
++..|..+ ..++. |++|+|++|++++.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 65554433 33322 66666666666666
Q ss_pred CCcccCCccccchhhhccCccCCCCcccccc---------------------------------ccccceEecccccccC
Q 039137 269 IPQEIGNLKKLNSLLLAKNHFRGTVPKSFRN---------------------------------LTDLVKLRLNQNYLTG 315 (912)
Q Consensus 269 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~---------------------------------l~~L~~L~L~~n~l~~ 315 (912)
.|..|+.+++|++|++++|++++..|..|.. +++|++|++++|.+++
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~ 343 (680)
T 1ziw_A 264 GNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG 343 (680)
T ss_dssp CTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC
T ss_pred CcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC
Confidence 6666666666666666666666554443333 3444444444444444
Q ss_pred CCCcccCCCCCccEEEccCC----------------------------cCcccccccCCCCCCCCEEeccCCccccccc-
Q 039137 316 NISETFGTYPNLTFIDLSNN----------------------------SFFGEILSDWGRCPQLSLLDVSINNISGSIP- 366 (912)
Q Consensus 316 ~~~~~~~~l~~L~~L~Ls~N----------------------------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~- 366 (912)
..+..|..+++|++|++++| ++++..+..+..+++|+.|++++|++.+.+|
T Consensus 344 ~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 423 (680)
T 1ziw_A 344 IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG 423 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS
T ss_pred CChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc
Confidence 44444444444444444333 2223333344444444444444444444333
Q ss_pred ccccccccccEEEccCccccCCCCccccccccccEEEccCCccc--CCCccccccccccccccccCcccCcccccccccc
Q 039137 367 LEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLS--GCIPRELGSLINLEYLDLSANNLSNFVPESLGSL 444 (912)
Q Consensus 367 ~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 444 (912)
..+.++++|++|++++|++.+..+..+..+++|+.|++++|.++ +..|..+..+++|++|+|++|+++++.+..|..+
T Consensus 424 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l 503 (680)
T 1ziw_A 424 QEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGL 503 (680)
T ss_dssp GGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccc
Confidence 34444444555555555544444444555555555555555554 4567777788888888888888888777778888
Q ss_pred ccccEEEecccccccccc--------hhhhcccccceeeccccccCcccccccccccccccccccCccccCCCccccccc
Q 039137 445 VKLYYLNLSHNKLSQQIP--------IELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEM 516 (912)
Q Consensus 445 ~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 516 (912)
++|++|+|++|++++..+ ..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|+|+++.+..|..+
T Consensus 504 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l 583 (680)
T 1ziw_A 504 EKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQ 583 (680)
T ss_dssp TTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred cccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCC
Confidence 888888888888875422 236778888888888888876666678888888888888888888877788888
Q ss_pred ccceEEEccCCccccCCCCCc--cCCCCchhhhccCCcccC
Q 039137 517 HGLLHIDISYNKLEGQIPNST--TFRDAPLEALQGNKGLYG 555 (912)
Q Consensus 517 ~~L~~l~ls~N~l~~~~~~~~--~~~~~~~~~l~~n~~~~~ 555 (912)
++|+.|++++|++++.+|... .+.......+.+|+-.|.
T Consensus 584 ~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 584 VSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp TTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 888888888888887665432 344455555677777664
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-53 Score=520.13 Aligned_cols=470 Identities=24% Similarity=0.246 Sum_probs=355.3
Q ss_pred CccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccC-CccccCCCCCcEEecccccccccccc
Q 039137 73 CAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGII-PPQISNLSNLEYLDFSANKLFGQIPS 151 (912)
Q Consensus 73 C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~Ls~n~l~~~~p~ 151 (912)
|.|..|.+ -..++..++++.+.+.+ +.+.+|.++++|++|+|++|.+.+.+ |..|+++++|++|+|++|++.+..|+
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~-i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRT-VTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCE-ECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCc-cChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888877 56788999999888764 44567999999999999999776666 77899999999999999999988899
Q ss_pred ccccccccceeecccccccCCCCcc--ccCcccccEEEccCCcCCCCCC-ccCCCCccceeeeeccCCCcCccccccccc
Q 039137 152 GIGLLTHLTVLHISRNWLSGSIPHE--VGQLTVLNQLALDSNFLNGSIP-RSLGNLTHVVILYLYNNSFFGSIPQEIGNL 228 (912)
Q Consensus 152 ~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 228 (912)
.|+++++|++|+|++|.+++.+|.. ++++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999877776 9999999999999999987765 579999999999999999999999999888
Q ss_pred --cccceeecccccccCccccccccccc------cceeeeccccCcccCCcccCC-------------------------
Q 039137 229 --KSLFDLELCINQLSGAIPLSISNLTN------LRFLFLYHNELSGIIPQEIGN------------------------- 275 (912)
Q Consensus 229 --~~L~~L~l~~n~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~~~~l~~------------------------- 275 (912)
++|+.|+++.|.+.+..|..++.+++ |+.|++++|.+++..+..+..
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 88999999999998888877777665 888888888777655544332
Q ss_pred -------------ccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccccc
Q 039137 276 -------------LKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEIL 342 (912)
Q Consensus 276 -------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 342 (912)
.++|+.|+|++|.+.+..|..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|.+.+..+
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 1568888888888888778888888888888888888888888888888888888888888888778
Q ss_pred ccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcc-------
Q 039137 343 SDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPR------- 415 (912)
Q Consensus 343 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~------- 415 (912)
..+..+++|+.|++++|++.+..+..+..+++|++|+|++|.+++. +. +++|+.|++++|+++ .+|.
T Consensus 332 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-~~----~~~L~~L~l~~N~l~-~l~~~~~~l~~ 405 (844)
T 3j0a_A 332 SNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-HF----IPSIPDIFLSGNKLV-TLPKINLTANL 405 (844)
T ss_dssp CSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-SS----CCSCSEEEEESCCCC-CCCCCCTTCCE
T ss_pred HHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-cC----CCCcchhccCCCCcc-cccccccccce
Confidence 8888888888888888888877777788888888888888887742 11 334444444444443 1111
Q ss_pred ---------------ccccccccccccccCcccCccccc-cccccccccEEEecccccc-----cccchhhhccccccee
Q 039137 416 ---------------ELGSLINLEYLDLSANNLSNFVPE-SLGSLVKLYYLNLSHNKLS-----QQIPIELDNLIHLSEL 474 (912)
Q Consensus 416 ---------------~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L 474 (912)
.+..+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|++|
T Consensus 406 L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L 485 (844)
T 3j0a_A 406 IHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVL 485 (844)
T ss_dssp EECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECC
T ss_pred eecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEE
Confidence 133566666666666666654332 3444566666666666665 2334456666667777
Q ss_pred eccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCCCCccCCCCchhhhccCCccc
Q 039137 475 DLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 475 ~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~l~~n~~~~ 554 (912)
+|++|+|++.+|..|..+++|+.|+|++|+|+++.|..+. ++|+.|++++|++++.+|.. |.......+.+|+-.|
T Consensus 486 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C 561 (844)
T 3j0a_A 486 YLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFIC 561 (844)
T ss_dssp CCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCC
T ss_pred ECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccc
Confidence 7777777666666666677777777777777666665554 56666666666666666543 3333333445555544
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=7.8e-53 Score=503.56 Aligned_cols=426 Identities=23% Similarity=0.203 Sum_probs=392.7
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
+++++|+|++|++++..|..|+++++|++|+|++|++.+..|..|+++++|++|+|++|.+++..|..|+.+++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999988999999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccc--eeeeccccCc
Q 039137 189 DSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLR--FLFLYHNELS 266 (912)
Q Consensus 189 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~--~L~L~~N~l~ 266 (912)
++|++++..|..++++++|++|++++|.+++..+..+..+++|+.|++++|++++..|..++.+++|+ .|++++|+++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999987788999999999999999999975544555599999999999999988899999999999 8999999999
Q ss_pred ccCCcccCCc---------------------------------------------------cccchhhhccCccCCCCcc
Q 039137 267 GIIPQEIGNL---------------------------------------------------KKLNSLLLAKNHFRGTVPK 295 (912)
Q Consensus 267 ~~~~~~l~~l---------------------------------------------------~~L~~L~L~~N~l~~~~~~ 295 (912)
+..|..+... .+|+.|++++|.+++..+.
T Consensus 193 ~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~ 272 (606)
T 3t6q_A 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN 272 (606)
T ss_dssp EECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT
T ss_pred ccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHH
Confidence 8877665431 1688899999999988888
Q ss_pred ccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccccccc-cccccc
Q 039137 296 SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLE-IGESLQ 374 (912)
Q Consensus 296 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~~~~ 374 (912)
.|..+++|++|++++|.++ .+|..+..+++|++|++++|++.+..+..+..+++|+.|++++|.+.+.+|.. +..+++
T Consensus 273 ~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 273 TFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred HhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 8999999999999999999 56778999999999999999999988999999999999999999999777654 889999
Q ss_pred ccEEEccCccccCCC--CccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccc-cccccccccEEE
Q 039137 375 LQYLDLSSNYIVGEI--PTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPE-SLGSLVKLYYLN 451 (912)
Q Consensus 375 L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~ 451 (912)
|++|++++|++++.. +..+.++++|++|++++|++++..|..+..+++|++|++++|++++..+. .+..+++|++|+
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 431 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLN 431 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEE
Confidence 999999999999765 77899999999999999999988999999999999999999999987654 489999999999
Q ss_pred ecccccccccchhhhcccccceeeccccccCcc---cccccccccccccccccCccccCCCcccccccccceEEEccCCc
Q 039137 452 LSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK---ISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNK 528 (912)
Q Consensus 452 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 528 (912)
+++|++++..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|++++..|..|..+++|+.|++++|+
T Consensus 432 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 511 (606)
T 3t6q_A 432 LSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNR 511 (606)
T ss_dssp CTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCc
Confidence 999999999999999999999999999999873 33678999999999999999999999999999999999999999
Q ss_pred cccCCCC
Q 039137 529 LEGQIPN 535 (912)
Q Consensus 529 l~~~~~~ 535 (912)
+++.+|.
T Consensus 512 l~~~~~~ 518 (606)
T 3t6q_A 512 LTSSSIE 518 (606)
T ss_dssp CCGGGGG
T ss_pred cCcCChh
Confidence 9987764
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3e-52 Score=498.51 Aligned_cols=461 Identities=24% Similarity=0.223 Sum_probs=381.8
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceee
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (912)
.+++.++++++.+.+ +.+.+|+++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKI-LKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCE-eChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 467888888887764 3455789999999999999999988888999999999999999999988899999999999999
Q ss_pred cccccccCCCCccccCcccccEEEccCCcCCC-CCCccCCCCccceeeeeccCCCcCccccccccccccc----eeeccc
Q 039137 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLF----DLELCI 238 (912)
Q Consensus 164 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~l~~ 238 (912)
|++|.+++..|..++++++|++|++++|++.+ .+|..++++++|++|++++|.+++..|..++.+++|+ .|++++
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 99999997777889999999999999999986 6799999999999999999999988888888888776 789999
Q ss_pred ccccCccccccccccccceeeeccccCc----------------------------------------------------
Q 039137 239 NQLSGAIPLSISNLTNLRFLFLYHNELS---------------------------------------------------- 266 (912)
Q Consensus 239 n~l~~~~p~~~~~l~~L~~L~L~~N~l~---------------------------------------------------- 266 (912)
|++++..+..+... +|+.|++++|.++
T Consensus 191 n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 191 NPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 99886555555444 7888888877653
Q ss_pred ------ccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccc
Q 039137 267 ------GIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGE 340 (912)
Q Consensus 267 ------~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (912)
+.+|. +..+++|+.|++++|.+. .+| .+..+++|++|++++|.+ +.+| .+ .+++|+.|++++|+..+.
T Consensus 270 ~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 270 YTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp CCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEE
T ss_pred ccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccc
Confidence 22333 566778888888888886 445 788888888999999888 4556 44 888888899888866543
Q ss_pred ccccCCCCCCCCEEeccCCccccc--ccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCc-ccc
Q 039137 341 ILSDWGRCPQLSLLDVSINNISGS--IPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP-REL 417 (912)
Q Consensus 341 ~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~ 417 (912)
. .+..+++|+.|++++|++++. .|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++++..| ..+
T Consensus 344 ~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 420 (606)
T 3vq2_A 344 F--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAF 420 (606)
T ss_dssp C--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTT
T ss_pred h--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhh
Confidence 3 677889999999999999866 37788888999999999999884 66888889999999999999988777 678
Q ss_pred ccccccccccccCcccCccccccccccccccEEEeccccccc-ccchhhhcccccceeeccccccCcccccccccccccc
Q 039137 418 GSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQ-QIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 496 (912)
Q Consensus 418 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 496 (912)
..+++|++|++++|.+.+..|..+..+++|++|+|++|++++ .+|..+..+++|++|+|++|++++..|..|..+++|+
T Consensus 421 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 421 LSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 889999999999999998888889999999999999999987 4788899999999999999999988888899999999
Q ss_pred cccccCccccCCCcccccccccceEEEccCCccccCCCCCccCC-CCchhhhccCCcccC
Q 039137 497 KLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTFR-DAPLEALQGNKGLYG 555 (912)
Q Consensus 497 ~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~-~~~~~~l~~n~~~~~ 555 (912)
.|++++|++++..|..|..+++|++|++++|+++..++....+. ......+.+|+-.|.
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 99999999999889999999999999999999985333322222 133345667766553
No 10
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.6e-50 Score=488.44 Aligned_cols=432 Identities=25% Similarity=0.265 Sum_probs=309.6
Q ss_pred ccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCcccc--Ccc
Q 039137 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVG--QLT 181 (912)
Q Consensus 104 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~--~l~ 181 (912)
+|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+++..|..++ .++
T Consensus 92 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~ 171 (680)
T 1ziw_A 92 TFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANS 171 (680)
T ss_dssp TTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTC
T ss_pred hhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccc
Confidence 344455555555555555444444455555555555555554444444444444455555544444433333322 224
Q ss_pred cccEEEccCCcCCCCCCccCCCC---------------------------ccceeeeeccCCCcCccccccccccc--cc
Q 039137 182 VLNQLALDSNFLNGSIPRSLGNL---------------------------THVVILYLYNNSFFGSIPQEIGNLKS--LF 232 (912)
Q Consensus 182 ~L~~L~l~~n~l~~~~p~~~~~l---------------------------~~L~~L~L~~n~l~~~~p~~~~~l~~--L~ 232 (912)
+|++|++++|++++..|..+..+ ++|++|++++|.+++..|..+.+++. |+
T Consensus 172 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~ 251 (680)
T 1ziw_A 172 SLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLT 251 (680)
T ss_dssp EESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCC
T ss_pred cccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCC
Confidence 44444444444444333332222 12233333333333333334444433 66
Q ss_pred eeecccccccCccccccccccccceeeeccccCcccCCc---------------------------------ccCCcccc
Q 039137 233 DLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQ---------------------------------EIGNLKKL 279 (912)
Q Consensus 233 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~---------------------------------~l~~l~~L 279 (912)
.|++++|++++..|..|+.+++|++|++++|++++..|. .|..+++|
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L 331 (680)
T 1ziw_A 252 MLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCL 331 (680)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTC
T ss_pred EEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCC
Confidence 666666666555555556666666666666655544433 34456667
Q ss_pred chhhhccCccCCCCccccccccccceEecc----------------------------cccccCCCCcccCCCCCccEEE
Q 039137 280 NSLLLAKNHFRGTVPKSFRNLTDLVKLRLN----------------------------QNYLTGNISETFGTYPNLTFID 331 (912)
Q Consensus 280 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~----------------------------~n~l~~~~~~~~~~l~~L~~L~ 331 (912)
++|++++|++++..+..|.++++|++|+++ +|++++..+..|..+++|+.|+
T Consensus 332 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 411 (680)
T 1ziw_A 332 EHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLD 411 (680)
T ss_dssp CEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEe
Confidence 777777777777777777776666666554 4556666778899999999999
Q ss_pred ccCCcCccccc-ccCCCCCCCCEEeccCCcccccccccccccccccEEEccCcccc--CCCCccccccccccEEEccCCc
Q 039137 332 LSNNSFFGEIL-SDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIV--GEIPTQLGNIIYLNRLSLSGNK 408 (912)
Q Consensus 332 Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~ 408 (912)
|++|.+.+.++ ..+..+++|+.|++++|++.+..+..+..+++|++|++++|.+. +.+|..+.++++|+.|++++|+
T Consensus 412 L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~ 491 (680)
T 1ziw_A 412 LGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNN 491 (680)
T ss_dssp CCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSC
T ss_pred CCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCC
Confidence 99999987665 68899999999999999999989999999999999999999997 5788999999999999999999
Q ss_pred ccCCCccccccccccccccccCcccCcccc--------ccccccccccEEEecccccccccchhhhcccccceeeccccc
Q 039137 409 LSGCIPRELGSLINLEYLDLSANNLSNFVP--------ESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 480 (912)
Q Consensus 409 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 480 (912)
+++..+..|..+++|++|+|++|+++++.+ ..|..+++|++|+|++|+++...+..|.++++|++|+|++|+
T Consensus 492 l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 571 (680)
T 1ziw_A 492 IANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNN 571 (680)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCC
Confidence 998888889999999999999999987533 247889999999999999996666679999999999999999
Q ss_pred cCcccccccccccccccccccCccccCCCccccc-ccccceEEEccCCccccCCCC
Q 039137 481 LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE-EMHGLLHIDISYNKLEGQIPN 535 (912)
Q Consensus 481 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~l~ls~N~l~~~~~~ 535 (912)
|++..+..|..+++|+.|+|++|+|++..|..|. .+++|+.+++++|+|.|..+.
T Consensus 572 l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 572 LNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9998888899999999999999999999998888 899999999999999997653
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-50 Score=477.25 Aligned_cols=443 Identities=23% Similarity=0.239 Sum_probs=384.8
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceee
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (912)
.++..++++++.+.+ +.+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|+
T Consensus 28 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (570)
T 2z63_A 28 FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (570)
T ss_dssp SSCCEEECCSCCCCE-ECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred ccccEEEccCCccCc-cChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccc
Confidence 357788888877764 3455788999999999999999988888899999999999999999877778899999999999
Q ss_pred cccccccCCCCccccCcccccEEEccCCcCCC-CCCccCCCCccceeeeeccCCCcCcccccccccccc----ceeeccc
Q 039137 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSL----FDLELCI 238 (912)
Q Consensus 164 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L----~~L~l~~ 238 (912)
+++|.+++..+..++++++|++|++++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++| +.|++++
T Consensus 107 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp CTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 99999986555579999999999999999986 578999999999999999999998888889988888 8899999
Q ss_pred ccccCccccccccccccceeeeccc-------------------------------------------------------
Q 039137 239 NQLSGAIPLSISNLTNLRFLFLYHN------------------------------------------------------- 263 (912)
Q Consensus 239 n~l~~~~p~~~~~l~~L~~L~L~~N------------------------------------------------------- 263 (912)
|.+++..|..+..+ +|+.|++++|
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99988777777665 7888888776
Q ss_pred ---cCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccc
Q 039137 264 ---ELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGE 340 (912)
Q Consensus 264 ---~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (912)
.+.+..|..+..+++|++|++++|.++ .+|..+..+ +|++|++++|.++.. |. ..+++|+.|++++|.+.+.
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l-~~--~~l~~L~~L~l~~n~~~~~ 340 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQF-PT--LKLKSLKRLTFTSNKGGNA 340 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSC-CB--CBCSSCCEEEEESCBSCCB
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccccc-Cc--ccccccCEEeCcCCccccc
Confidence 334456677778888889999988888 577778777 899999999988843 33 4678899999999988766
Q ss_pred ccccCCCCCCCCEEeccCCcccccc--cccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCc-ccc
Q 039137 341 ILSDWGRCPQLSLLDVSINNISGSI--PLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP-REL 417 (912)
Q Consensus 341 ~~~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~ 417 (912)
.+. ..+++|+.|++++|++++.. +..+..+++|++|++++|.+.+..+ .+..+++|++|++++|++++..| ..+
T Consensus 341 ~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~ 417 (570)
T 2z63_A 341 FSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVF 417 (570)
T ss_dssp CCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTT
T ss_pred ccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhh
Confidence 554 78899999999999998654 6788899999999999999996544 49999999999999999997766 578
Q ss_pred ccccccccccccCcccCccccccccccccccEEEecccccc-cccchhhhcccccceeeccccccCcccccccccccccc
Q 039137 418 GSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLS-QQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 496 (912)
Q Consensus 418 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 496 (912)
..+++|++|++++|.+.+..|..|..+++|++|+|++|+++ +.+|..+..+++|++|+|++|++++..|..|..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 89999999999999999999999999999999999999997 57899999999999999999999999899999999999
Q ss_pred cccccCccccCCCcccccccccceEEEccCCccccCCCCC
Q 039137 497 KLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS 536 (912)
Q Consensus 497 ~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~ 536 (912)
.|++++|++++.+|..|..+++|+.|++++|+++|.+|..
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999999999998899999999999999999999988754
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-50 Score=498.98 Aligned_cols=441 Identities=25% Similarity=0.243 Sum_probs=378.1
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccc--cccccccce
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSG--IGLLTHLTV 161 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~--~~~l~~L~~ 161 (912)
.....++++.+...+.+.+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. |+.+++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 456778888887788888889999999999999999999999999999999999999999999877765 999999999
Q ss_pred eecccccccCCCC-ccccCcccccEEEccCCcCCCCCCccCCCC--ccceeeeeccCCCcCccccccccccc------cc
Q 039137 162 LHISRNWLSGSIP-HEVGQLTVLNQLALDSNFLNGSIPRSLGNL--THVVILYLYNNSFFGSIPQEIGNLKS------LF 232 (912)
Q Consensus 162 L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~------L~ 232 (912)
|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..+ ++|+.|++++|.+.+..|..++.+.+ |+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 9999999997755 579999999999999999999999999888 88999999999999888887777765 89
Q ss_pred eeecccccccCcccccccc--------------------------------------ccccceeeeccccCcccCCcccC
Q 039137 233 DLELCINQLSGAIPLSISN--------------------------------------LTNLRFLFLYHNELSGIIPQEIG 274 (912)
Q Consensus 233 ~L~l~~n~l~~~~p~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~~~~l~ 274 (912)
.|++++|++++..|..+.. .++|+.|+|++|.+++..|..|.
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 287 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE 287 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhh
Confidence 9999999877665544432 26788999999999888888899
Q ss_pred CccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEE
Q 039137 275 NLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLL 354 (912)
Q Consensus 275 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 354 (912)
.+++|+.|+|++|++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|++.+..+..|..+++|+.|
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 367 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTL 367 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEE
T ss_pred cCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEE
Confidence 99999999999999998888889999999999999999988888889999999999999999988888888889999999
Q ss_pred eccCCcccccccccccccccccEEEc--------------------cCccccCC-CCccccccccccEEEccCCcccCCC
Q 039137 355 DVSINNISGSIPLEIGESLQLQYLDL--------------------SSNYIVGE-IPTQLGNIIYLNRLSLSGNKLSGCI 413 (912)
Q Consensus 355 ~Ls~N~l~~~~~~~~~~~~~L~~L~L--------------------~~N~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~ 413 (912)
++++|.+++.. .+++|+.|++ ++|++++. .+..+.++++|+.|+|++|++++..
T Consensus 368 ~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~ 442 (844)
T 3j0a_A 368 DLRDNALTTIH-----FIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCS 442 (844)
T ss_dssp EEETCCSCCCS-----SCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCC
T ss_pred ECCCCCCCccc-----CCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccc
Confidence 99999887421 2444555554 45544432 1123457899999999999999655
Q ss_pred cc-ccccccccccccccCcccC-----ccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccc
Q 039137 414 PR-ELGSLINLEYLDLSANNLS-----NFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISS 487 (912)
Q Consensus 414 p~-~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 487 (912)
+. .+..+++|+.|+|++|.++ +..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+.
T Consensus 443 ~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~ 522 (844)
T 3j0a_A 443 GDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHN 522 (844)
T ss_dssp SSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCC
T ss_pred cccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChh
Confidence 43 4566899999999999997 44456789999999999999999999999999999999999999999998887
Q ss_pred ccccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 488 RICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 488 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
.+. ++|+.|+|++|+|++.+|..|. +|+.+++++|++.|..+
T Consensus 523 ~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 523 DLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDITHNKFICECE 564 (844)
T ss_dssp CCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEEEECCCCSSS
T ss_pred hhh--ccccEEECCCCcCCCCChhHhC---CcCEEEecCCCcccccc
Confidence 776 8999999999999999998764 78899999999999665
No 13
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.8e-50 Score=477.17 Aligned_cols=440 Identities=21% Similarity=0.200 Sum_probs=391.8
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceee
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (912)
.++..++++++.+.+ +.+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 56 ~~L~~L~Ls~n~l~~-i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 134 (606)
T 3vq2_A 56 SELQWLDLSRCEIET-IEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLN 134 (606)
T ss_dssp TTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEE
T ss_pred ccCcEEeCCCCcccc-cCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEe
Confidence 467788888887764 4456799999999999999999998899999999999999999999977778899999999999
Q ss_pred cccccccC-CCCccccCcccccEEEccCCcCCCCCCccCCCCccce----eeeeccCCCcCccccccccccccceeeccc
Q 039137 164 ISRNWLSG-SIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVV----ILYLYNNSFFGSIPQEIGNLKSLFDLELCI 238 (912)
Q Consensus 164 L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 238 (912)
|++|.+++ .+|..++++++|++|++++|++++..|..++++++|+ +|++++|.+++..+..+... +|+.|++++
T Consensus 135 L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~ 213 (606)
T 3vq2_A 135 VAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRG 213 (606)
T ss_dssp CCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEES
T ss_pred CCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccC
Confidence 99999986 6799999999999999999999988888888888765 79999999886555555444 788888887
Q ss_pred cccc----------------------------------------------------------Cccccccccccccceeee
Q 039137 239 NQLS----------------------------------------------------------GAIPLSISNLTNLRFLFL 260 (912)
Q Consensus 239 n~l~----------------------------------------------------------~~~p~~~~~l~~L~~L~L 260 (912)
|.++ +.+|. +..+++|+.|++
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSL 292 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEe
Confidence 7653 33444 777899999999
Q ss_pred ccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccc
Q 039137 261 YHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGE 340 (912)
Q Consensus 261 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (912)
++|.+.. +| .+..+++|++|++++|.+ +.+| .+ .+++|++|++++|...+.. .+..+++|++|++++|.+++.
T Consensus 293 ~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~ 365 (606)
T 3vq2_A 293 AGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFS 365 (606)
T ss_dssp ESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEE
T ss_pred cCccchh-hh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCC
Confidence 9999985 55 899999999999999999 5777 45 9999999999999655433 678999999999999999876
Q ss_pred c--cccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCC-ccccccccccEEEccCCcccCCCcccc
Q 039137 341 I--LSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIP-TQLGNIIYLNRLSLSGNKLSGCIPREL 417 (912)
Q Consensus 341 ~--~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~ 417 (912)
. +..+..+++|+.|++++|.+.+ +|..+..+++|++|++++|++.+..| ..+.++++|+.|++++|++++..|..+
T Consensus 366 ~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 444 (606)
T 3vq2_A 366 GCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIF 444 (606)
T ss_dssp EECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred cchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhh
Confidence 4 7788999999999999999985 66889999999999999999998877 689999999999999999999999999
Q ss_pred ccccccccccccCcccCc-cccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccc
Q 039137 418 GSLINLEYLDLSANNLSN-FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLE 496 (912)
Q Consensus 418 ~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 496 (912)
..+++|++|++++|++++ .+|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++.+|..|+.+++|+
T Consensus 445 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 524 (606)
T 3vq2_A 445 LGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLS 524 (606)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCC
T ss_pred cCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCC
Confidence 999999999999999998 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCccccCCCcccccccc-cceEEEccCCccccCCCC
Q 039137 497 KLNLSYNNLSGLIPRCFEEMH-GLLHIDISYNKLEGQIPN 535 (912)
Q Consensus 497 ~L~ls~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~~~~~~ 535 (912)
.|++++|+|+. +|..+..++ +|+.|++++|++.|..+.
T Consensus 525 ~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 525 TLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp EEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred EEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 99999999995 566699997 599999999999986653
No 14
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-50 Score=437.80 Aligned_cols=249 Identities=27% Similarity=0.392 Sum_probs=210.1
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
+.|++.+.||+|+||+||+|+++ +|+.||||++...... ..+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 56999999999999999999976 7999999998644322 245678999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
||||++|+|.+++.+ ..+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 150 mEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 150 MEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp ECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCC
Confidence 999999999999953 4589999999999999999999999 999999999999999999999999999998876
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKK 876 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (912)
........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+... .+.........
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~~i~~~-~~~~~~~~~~~ 296 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMKMIRDN-LPPRLKNLHKV 296 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHS-SCCCCSCGGGS
T ss_pred CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHHHHcC-CCCCCCccccC
Confidence 656667789999999999999999999999999999999999999998522111 111111111 11111122344
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 877 LMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 877 ~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
+.++.++|.+||++||++|||++|+++
T Consensus 297 s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 297 SPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 567889999999999999999999875
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-50 Score=429.83 Aligned_cols=256 Identities=26% Similarity=0.396 Sum_probs=201.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.+++++.+.||+|+||+||+|+++ ..||||+++.... .....++|.+|++++++++|||||+++|++.+ +..++|
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 467888999999999999999874 3599999865432 23356789999999999999999999999864 568999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
||||++|+|.++++.. ...+++.++..|+.|||.||+|||++ +||||||||+|||+++++.+||+|||+|+....
T Consensus 110 mEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 9999999999999543 35699999999999999999999999 999999999999999999999999999987653
Q ss_pred CC--CCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCC--CCCC
Q 039137 797 DS--SNWSELAGTHGYVAPELAYT---LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSR--LPYP 869 (912)
Q Consensus 797 ~~--~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~ 869 (912)
.. .......||+.|||||++.+ .+|+.++|||||||++|||+||+.||...... .......... .+..
T Consensus 185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-----~~~~~~~~~~~~~p~~ 259 (307)
T 3omv_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-----DQIIFMVGRGYASPDL 259 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHHTTCCCCCS
T ss_pred CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-----HHHHHHHhcCCCCCCc
Confidence 32 22345689999999999864 45899999999999999999999998632111 0111111111 1111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 907 (912)
.......+..+.+++.+||+.||++|||++||++.|+.
T Consensus 260 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 260 SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 11223345678899999999999999999999988764
No 16
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6.9e-51 Score=440.94 Aligned_cols=253 Identities=24% Similarity=0.366 Sum_probs=206.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+++ +|+.||||++...... ....+.+.+|++++++++|||||++++++.+++..|+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yi 100 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYI 100 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEE
Confidence 368999999999999999999876 7999999999765432 2356789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
|||||+||+|.+++... ....+++.+++.|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+...
T Consensus 101 VmEy~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 101 VMDYCEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp EEECCTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred EEeCCCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 99999999999999543 234578999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.........+||+.|||||++.+..|+.++||||+||++|||++|+.||.... .......+.....+... ..
T Consensus 177 ~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~~~~~~---~~ 248 (350)
T 4b9d_A 177 STVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIISGSFPPVS---LH 248 (350)
T ss_dssp HHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCCCCC---TT
T ss_pred CCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCCCCCCC---cc
Confidence 43333345689999999999999999999999999999999999999986321 11122223333332221 22
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+.++.++|.+||++||++|||++|+++
T Consensus 249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 249 YSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3456889999999999999999999975
No 17
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.1e-51 Score=434.86 Aligned_cols=256 Identities=25% Similarity=0.457 Sum_probs=210.5
Q ss_pred cCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
++|.+.+.||+|+||+||+|++. ++..||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 88 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 88 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC----ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC
Confidence 56888999999999999999863 4778999998643 2335678999999999999999999999999999
Q ss_pred eeeEEEeecCCCChhhHhhccC----------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC
Q 039137 712 HSFIIYEYLESGSLDKILCNDA----------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY 781 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 781 (912)
..++|||||++|+|.++++... ....+++.++++|+.|||+||+|||++ +|+||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 9999999999999999996532 245699999999999999999999999 999999999999999999
Q ss_pred cEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccch
Q 039137 782 EAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMN 858 (912)
Q Consensus 782 ~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~ 858 (912)
.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||..... ....
T Consensus 166 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~-----~~~~ 240 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVI 240 (299)
T ss_dssp CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHH
T ss_pred cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHH
Confidence 9999999999866443222 223468999999999999999999999999999999999 8999863211 1122
Q ss_pred hhhccCC-CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 859 IEMLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 859 ~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
..+.... .+.|. ..+.++.+++.+||+.||++|||++||.+.|++..
T Consensus 241 ~~i~~~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 241 ECITQGRVLQRPR----TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 2222222 22222 23456889999999999999999999999998754
No 18
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-50 Score=433.02 Aligned_cols=255 Identities=21% Similarity=0.360 Sum_probs=209.6
Q ss_pred cCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
.++++.+.||+|+||+||+|++. +++.||||+++...... ..++|.+|+.++++++|||||+++|+|.+++
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~---~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~ 102 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGP---LREEFRHEAMLRARLQHPNVVCLLGVVTKDQ 102 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChH---HHHHHHHHHHHHHhCCCCCCCCcceEEEECC
Confidence 35677889999999999999862 56789999997543322 4678999999999999999999999999999
Q ss_pred eeeEEEeecCCCChhhHhhccC-------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc
Q 039137 712 HSFIIYEYLESGSLDKILCNDA-------------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 778 (912)
..++|||||++|+|.+++.... ....+++.++.+|+.|||+||+|||++ +||||||||+|||++
T Consensus 103 ~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 103 PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVY 179 (308)
T ss_dssp SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEEC
Confidence 9999999999999999996532 134689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccc
Q 039137 779 LGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSS 855 (912)
Q Consensus 779 ~~~~~kl~Dfgla~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~ 855 (912)
+++.+||+|||+|+...... .......||++|||||++.+..|+.++|||||||++|||+| |+.||..... .
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~-----~ 254 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----Q 254 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH-----H
T ss_pred CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH-----H
Confidence 99999999999998764332 22345679999999999999999999999999999999999 8999863211 1
Q ss_pred cchhhhccCC-CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 039137 856 NMNIEMLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907 (912)
Q Consensus 856 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 907 (912)
.....+.... .+.|. ..+..+.+++.+||+.||++||||+||++.|+.
T Consensus 255 ~~~~~i~~~~~~~~p~----~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 255 DVVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1112222222 23332 344568899999999999999999999999974
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.6e-51 Score=486.72 Aligned_cols=488 Identities=19% Similarity=0.252 Sum_probs=403.2
Q ss_pred CCCHHHHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCCCccce-eEecCC---CCeEEEeeccccccccccccccCCC
Q 039137 33 SNSAEEAHALVKWKASLEVHSRSLLHSWSLSSVNATKISPCAWSG-IFCNHA---ERVVGINLTSISLNGTLLEFSFSSF 108 (912)
Q Consensus 33 ~~~~~~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~C~w~g-v~c~~~---~~v~~l~l~~~~l~~~~~~~~~~~l 108 (912)
...+++.+.-.++++-...- . -..|..... .....|.|.. ..|... ..|+.- . -
T Consensus 23 ~~~~~~~~d~~aL~~~~~~~-~--~~~w~~~~~--~~~~~~~W~~~~~~c~w~~~~GV~C~---~--------------~ 80 (636)
T 4eco_A 23 SRTAEYIKDYLALKEIWDAL-N--GKNWSQQGF--GTQPGANWNFNKELDMWGAQPGVSLN---S--------------N 80 (636)
T ss_dssp CCCCHHHHHHHHHHHHHHHT-T--GGGCCCCC--------CCCCCSSCGGGTTCCTTEEEC---T--------------T
T ss_pred hhhhhHHHHHHHHHHHHHHc-C--CCCcccCCc--CCccCCCCCCCCCcccccCCCCeEEc---C--------------C
Confidence 35555666666666654322 2 236764321 1112358963 334333 345431 0 1
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEecccccc------cc------ccccccccccccceeecccccccCCCCcc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKL------FG------QIPSGIGLLTHLTVLHISRNWLSGSIPHE 176 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 176 (912)
.+++.|+|++|++.|.+|++|++|++|++|||++|.+ .| .+|... +.+|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 4688999999999999999999999999999999986 33 456554 77888 999999999999888
Q ss_pred ccCc-ccccEEEcc--------------------CCcCCCCCCccCCCCccceeeeeccCCCcCc---------------
Q 039137 177 VGQL-TVLNQLALD--------------------SNFLNGSIPRSLGNLTHVVILYLYNNSFFGS--------------- 220 (912)
Q Consensus 177 ~~~l-~~L~~L~l~--------------------~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--------------- 220 (912)
++.+ ..+..+++. +|+++| +|..++++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~ 236 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQ 236 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHH
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhc
Confidence 7732 222222222 688998 999999999999999999999986
Q ss_pred --cccccc--cccccceeecccccccCccccccccccccceeeecccc-Ccc-cCCcccCCc------cccchhhhccCc
Q 039137 221 --IPQEIG--NLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNE-LSG-IIPQEIGNL------KKLNSLLLAKNH 288 (912)
Q Consensus 221 --~p~~~~--~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~~~~l~~l------~~L~~L~L~~N~ 288 (912)
+|..++ ++++|++|++++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++++ ++|++|++++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred ccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 999999 99999999999999999999999999999999999998 998 889988887 999999999999
Q ss_pred cCCCCcc--ccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCC-CCEEeccCCcccccc
Q 039137 289 FRGTVPK--SFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQ-LSLLDVSINNISGSI 365 (912)
Q Consensus 289 l~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~ 365 (912)
++ .+|. .|.++++|++|++++|.++|.+| .|+.+++|++|+|++|++. .+|..+..+++ |+.|++++|+++ .+
T Consensus 317 l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 317 LK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred CC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 99 7888 89999999999999999998888 9999999999999999998 78888999999 999999999999 78
Q ss_pred cccccccc--cccEEEccCccccCCCCcccc-------ccccccEEEccCCcccCCCccccccccccccccccCcccCcc
Q 039137 366 PLEIGESL--QLQYLDLSSNYIVGEIPTQLG-------NIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNF 436 (912)
Q Consensus 366 ~~~~~~~~--~L~~L~L~~N~l~~~~~~~l~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 436 (912)
|..+.... +|++|++++|++++.+|..+. .+.+|++|+|++|+++...+..+..+++|++|+|++|+++.+
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i 472 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEI 472 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBC
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCc
Confidence 88887765 899999999999999999888 888999999999999954444556699999999999999965
Q ss_pred ccccccccc-------cccEEEecccccccccchhhh--cccccceeeccccccCcccccccccccccccccc------c
Q 039137 437 VPESLGSLV-------KLYYLNLSHNKLSQQIPIELD--NLIHLSELDLSHNFLGEKISSRICRMESLEKLNL------S 501 (912)
Q Consensus 437 ~~~~~~~l~-------~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l------s 501 (912)
.+..+.... +|++|+|++|+++ .+|..+. .+++|++|+|++|+|++ +|..+..+++|+.|+| +
T Consensus 473 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls 550 (636)
T 4eco_A 473 PKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQ 550 (636)
T ss_dssp CSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTT
T ss_pred CHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccc
Confidence 555554433 9999999999998 6888887 99999999999999998 8999999999999999 5
Q ss_pred CccccCCCcccccccccceEEEccCCccccCCCCCccCCCCchhhhccCCccc
Q 039137 502 YNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 502 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~l~~n~~~~ 554 (912)
+|++.+.+|..+..+++|+.|++++|++ +.+|... +.......+.+|+-.|
T Consensus 551 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 551 GNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNIS 601 (636)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCE
T ss_pred cCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCcc
Confidence 6889999999999999999999999999 6777642 2333334455665443
No 20
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.5e-50 Score=435.22 Aligned_cols=256 Identities=26% Similarity=0.450 Sum_probs=204.9
Q ss_pred cCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
++|.+.+.||+|+||+||+|+++ +++.||||+++.. .....++|.+|++++++++|||||+++|+|.+++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~----~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~ 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA----SESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC----SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC----CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 46778899999999999999864 4788999998643 2335678999999999999999999999999999
Q ss_pred eeeEEEeecCCCChhhHhhccC------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC
Q 039137 712 HSFIIYEYLESGSLDKILCNDA------------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL 779 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 779 (912)
..++|||||++|+|.++++... ...++++.++++|+.|||.||+|||++ +|+||||||+|||+++
T Consensus 117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEET
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECC
Confidence 9999999999999999996543 234699999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhcccccccc
Q 039137 780 GYEAHVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSN 856 (912)
Q Consensus 780 ~~~~kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~ 856 (912)
++.+||+|||+|+....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||..... ..
T Consensus 194 ~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~-----~~ 268 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-----TE 268 (329)
T ss_dssp TTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH-----HH
T ss_pred CCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH-----HH
Confidence 99999999999987644322 2234679999999999999999999999999999999999 8999863211 11
Q ss_pred chhhhccC-CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 857 MNIEMLDS-RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 857 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
....+... +.+.|. ..+.++.+++.+||+.||++|||++||++.|+...
T Consensus 269 ~~~~i~~g~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 269 AIDCITQGRELERPR----ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp HHHHHHHTCCCCCCT----TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcc----cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11122222 223332 23456889999999999999999999999998764
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.3e-50 Score=472.07 Aligned_cols=450 Identities=20% Similarity=0.216 Sum_probs=329.3
Q ss_pred CCccceeEecCC------------CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEe
Q 039137 72 PCAWSGIFCNHA------------ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLD 139 (912)
Q Consensus 72 ~C~w~gv~c~~~------------~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 139 (912)
.|.|.|+ |+.. ..++.+++.++.+.+. .+.+|.++++|++|+|++|++++..|..|+++++|++||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYI-GHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEE-CSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCcc-ChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEE
Confidence 4999998 8632 2466677776666543 344677778888888888888777777778888888888
Q ss_pred ccccccccccccccccccccceeecccccccC-CCCccccCcccccEEEccCCcCCCCCC-ccCCCCccceeeeeccCCC
Q 039137 140 FSANKLFGQIPSGIGLLTHLTVLHISRNWLSG-SIPHEVGQLTVLNQLALDSNFLNGSIP-RSLGNLTHVVILYLYNNSF 217 (912)
Q Consensus 140 Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l 217 (912)
|++|++++..|..|+.+++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+| ..+.++++|++|++++|.+
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 88888776666667778888888888887775 356677778888888888777544554 5677788888888888888
Q ss_pred cCccccccccccccceeecccccccCccccccccccccceeeeccccCcccC--C-cccCCccccchhhhccCccCCCCc
Q 039137 218 FGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGII--P-QEIGNLKKLNSLLLAKNHFRGTVP 294 (912)
Q Consensus 218 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--~-~~l~~l~~L~~L~L~~N~l~~~~~ 294 (912)
++..|..++++++|+.|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred cccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 7777777777788888888777776332233355778888888888877642 1 122345667777777776664333
Q ss_pred c----ccccccccceEecccccccCCCC------ccc-----------------------------CCCCCccEEEccCC
Q 039137 295 K----SFRNLTDLVKLRLNQNYLTGNIS------ETF-----------------------------GTYPNLTFIDLSNN 335 (912)
Q Consensus 295 ~----~~~~l~~L~~L~L~~n~l~~~~~------~~~-----------------------------~~l~~L~~L~Ls~N 335 (912)
. .+..+++|+.|++++|.+.+... ..+ ...++|+.|++++|
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESS
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccC
Confidence 2 23455677777777776654211 111 12346777777777
Q ss_pred cCcccccccC-CCCCCCCEEeccCCccccccc---ccccccccccEEEccCccccCCCC--ccccccccccEEEccCCcc
Q 039137 336 SFFGEILSDW-GRCPQLSLLDVSINNISGSIP---LEIGESLQLQYLDLSSNYIVGEIP--TQLGNIIYLNRLSLSGNKL 409 (912)
Q Consensus 336 ~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~---~~~~~~~~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~L~~N~l 409 (912)
.+. .+|..+ ..+++|+.|++++|++.+.+| ..++.+++|++|+|++|++++..+ ..+..+++|++|++++|++
T Consensus 321 ~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 399 (549)
T 2z81_A 321 KVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF 399 (549)
T ss_dssp CCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred ccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCC
Confidence 775 344443 578899999999999987664 346778889999999999885432 4578888999999999998
Q ss_pred cCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccccc
Q 039137 410 SGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRI 489 (912)
Q Consensus 410 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 489 (912)
+ .+|..+..+++|++|++++|+++++ |..+. ++|++|+|++|+|++.+ ..+++|++|+|++|+|+. +|. .
T Consensus 400 ~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~-ip~-~ 469 (549)
T 2z81_A 400 H-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT-LPD-A 469 (549)
T ss_dssp C-CCCSCCCCCTTCCEEECTTSCCSCC-CTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS-CCC-G
T ss_pred c-cCChhhcccccccEEECCCCCcccc-cchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccCc-CCC-c
Confidence 8 6788888888999999999998764 43332 58899999999988643 578899999999999974 554 4
Q ss_pred ccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 490 CRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 490 ~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
..+++|+.|+|++|+|++.+|..|..+++|+.|++++|++.|..|
T Consensus 470 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 470 SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred ccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 678999999999999999888889999999999999999988665
No 22
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7e-50 Score=431.21 Aligned_cols=253 Identities=25% Similarity=0.327 Sum_probs=207.3
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
+.|++.++||+|+||+||+|+++ +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+|
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46788899999999999999976 799999999975422 13699999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC-cEEEeccccccccC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY-EAHVSDFGIAKFLN 795 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfgla~~~~ 795 (912)
||||+||+|.+++++ .+.+++.++..|+.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+.
T Consensus 129 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~ 202 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQ 202 (336)
T ss_dssp ECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC-
T ss_pred EeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEcc
Confidence 999999999999954 35699999999999999999999999 999999999999999987 69999999999775
Q ss_pred CCCCC-----ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCC
Q 039137 796 PDSSN-----WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPS 870 (912)
Q Consensus 796 ~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (912)
..... ....+||+.|||||++.+..|+.++||||+||++|||++|++||..... ......+.....+. .
T Consensus 203 ~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~~~i~~~~~~~-~ 276 (336)
T 4g3f_A 203 PDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR-----GPLCLKIASEPPPI-R 276 (336)
T ss_dssp -----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC-----SCCHHHHHHSCCGG-G
T ss_pred CCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHHcCCCCc-h
Confidence 43221 2345799999999999999999999999999999999999999863211 11122222222111 1
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
......+..+.++|.+||++||++|||+.|+++.+.+.+.+
T Consensus 277 ~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 277 EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 11123456688999999999999999999999999887754
No 23
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.7e-50 Score=430.54 Aligned_cols=249 Identities=21% Similarity=0.329 Sum_probs=210.1
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||+||+|+++ +++.||||++.+..... ....+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~-~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIK-ENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 57999999999999999999876 79999999986422111 11356789999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
||||+||+|.+++.+ .+.+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 111 mEy~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 111 LSYAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp ECCCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 999999999999954 35699999999999999999999999 999999999999999999999999999998754
Q ss_pred CC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 797 DS--SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 797 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||... ........+......++.
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~~~~~~~i~~~~~~~p~---- 255 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-----NEGLIFAKIIKLEYDFPE---- 255 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCT----
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCCCc----
Confidence 33 2345678999999999999999999999999999999999999998621 112222333344444443
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVS 902 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl 902 (912)
..+.++.++|.+||++||++|||++|+.
T Consensus 256 ~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 256 KFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 2345688999999999999999999864
No 24
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-49 Score=416.24 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=193.5
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||+||+|+++ +|+.||||++........ ...+.+.+|+++++.++|||||++++++.+++..|+|
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKS-DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCH-HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 68999999999999999999875 799999999976543322 2456799999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+ +|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 92 mEy~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred EeCC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 9999 6799998854 35699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
. ......+||+.|||||++.+..+ +.++||||+||++|||++|+.||+.. ........+.....+.+. .
T Consensus 165 ~-~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~-----~~~~~~~~i~~~~~~~p~----~ 234 (275)
T 3hyh_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE-----SIPVLFKNISNGVYTLPK----F 234 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHTCCCCCT----T
T ss_pred C-CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCCCCCC----C
Confidence 3 33456789999999999998886 57999999999999999999998621 111122233334444432 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+.++.++|.+||+.||++|||++|+++
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 3456789999999999999999999876
No 25
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=6.8e-49 Score=476.19 Aligned_cols=412 Identities=22% Similarity=0.271 Sum_probs=360.5
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEec-ccccccccccccc----------------------------------
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDF-SANKLFGQIPSGI---------------------------------- 153 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L-s~n~l~~~~p~~~---------------------------------- 153 (912)
.+++.|+|++|++.|.+|++|++|++|++||| ++|.++|..|-..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 8998887744221
Q ss_pred -----------------ccccccceeeccc--ccccCCCCccccCcccccEEEccCCcCCC-----------------CC
Q 039137 154 -----------------GLLTHLTVLHISR--NWLSGSIPHEVGQLTVLNQLALDSNFLNG-----------------SI 197 (912)
Q Consensus 154 -----------------~~l~~L~~L~L~~--n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-----------------~~ 197 (912)
.....++.+.+.. |.+++ +|..|+++++|++|+|++|++++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1122344444544 89997 99999999999999999999998 49
Q ss_pred CccCC--CCccceeeeeccCCCcCccccccccccccceeeccccc-ccC-cccccccccc-------ccceeeeccccCc
Q 039137 198 PRSLG--NLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQ-LSG-AIPLSISNLT-------NLRFLFLYHNELS 266 (912)
Q Consensus 198 p~~~~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~ 266 (912)
|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ +++ .+|..+++++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 998 8998888776 9999999999999
Q ss_pred ccCCc--ccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCC-ccEEEccCCcCcccccc
Q 039137 267 GIIPQ--EIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPN-LTFIDLSNNSFFGEILS 343 (912)
Q Consensus 267 ~~~~~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~ 343 (912)
.+|. .++++++|++|+|++|+++ .+| .|..+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|++. .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8999999999999999999 778 8999999999999999999 78888999999 999999999998 6778
Q ss_pred cCCCCCC--CCEEeccCCccccccccc---cc--ccccccEEEccCccccCCCCccc-cccccccEEEccCCcccCCCcc
Q 039137 344 DWGRCPQ--LSLLDVSINNISGSIPLE---IG--ESLQLQYLDLSSNYIVGEIPTQL-GNIIYLNRLSLSGNKLSGCIPR 415 (912)
Q Consensus 344 ~~~~l~~--L~~L~Ls~N~l~~~~~~~---~~--~~~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~p~ 415 (912)
.+..++. |+.|++++|++.+.+|.. +. .+++|+.|+|++|+++ .+|..+ ..+++|+.|+|++|+++ .+|.
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 7877654 999999999999876643 22 3458999999999999 556554 58899999999999999 5665
Q ss_pred cccc--------ccccccccccCcccCcccccccc--ccccccEEEecccccccccchhhhcccccceeeccc------c
Q 039137 416 ELGS--------LINLEYLDLSANNLSNFVPESLG--SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH------N 479 (912)
Q Consensus 416 ~~~~--------l~~L~~L~Ls~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~------N 479 (912)
.+.. +++|+.|+|++|+|+. +|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~~-lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N 792 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLTS-LSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGN 792 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCCC-CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCC
T ss_pred HHhccccccccccCCccEEECCCCCCcc-chHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccc
Confidence 4433 3499999999999995 677776 99999999999999997 798999999999999977 8
Q ss_pred ccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCC
Q 039137 480 FLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQI 533 (912)
Q Consensus 480 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 533 (912)
++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....
T Consensus 793 ~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 793 RILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp BCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred cccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccC
Confidence 88899999999999999999999999 56777665 69999999999987543
No 26
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.8e-49 Score=438.21 Aligned_cols=250 Identities=27% Similarity=0.390 Sum_probs=210.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.+.|++.+.||+|+||+||+|+++ +|+.||||++...... ..+.+.+|+.+|+.++|||||++++++.+++..|+
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~i 225 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWV 225 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEE
Confidence 357999999999999999999976 7999999999754332 34568899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
|||||+||+|.+++.. ..+++.++..|+.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+.
T Consensus 226 VmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 226 VMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred EEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECC
Confidence 9999999999999943 3589999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.........+||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+... .+........
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~~i~~~-~~~~~~~~~~ 372 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMKMIRDN-LPPRLKNLHK 372 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHS-CCCCCSCTTS
T ss_pred CCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHHHHcC-CCCCCccccc
Confidence 6666667789999999999999999999999999999999999999998522111 111111111 1111111123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.++|.+||+.||++|||++|+++
T Consensus 373 ~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 373 VSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 4566889999999999999999999875
No 27
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-48 Score=460.81 Aligned_cols=437 Identities=21% Similarity=0.202 Sum_probs=387.9
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
+++++|+|++|++++..+..|.++++|++|||++|++++..|..|+++++|++|+|++|.+++..|..|+.+++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 57999999999999988889999999999999999999877889999999999999999999888899999999999999
Q ss_pred cCCcCCCCCCccCCCCccceeeeeccCCCcC-ccccccccccccceeecccccccCcccccccccccc----ceeeeccc
Q 039137 189 DSNFLNGSIPRSLGNLTHVVILYLYNNSFFG-SIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNL----RFLFLYHN 263 (912)
Q Consensus 189 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L----~~L~L~~N 263 (912)
++|++++..+..++++++|++|++++|.+++ .+|..++++++|+.|++++|++++..|..++.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997666689999999999999999987 579999999999999999999998888899999999 89999999
Q ss_pred cCcccCCcccCCccccchhhhccC--------------------------------------------------------
Q 039137 264 ELSGIIPQEIGNLKKLNSLLLAKN-------------------------------------------------------- 287 (912)
Q Consensus 264 ~l~~~~~~~l~~l~~L~~L~L~~N-------------------------------------------------------- 287 (912)
.+++..|..+..+ +|+.|++++|
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9998888887765 7888888776
Q ss_pred --ccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccc
Q 039137 288 --HFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSI 365 (912)
Q Consensus 288 --~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 365 (912)
.+.+..|..|..+++|+.|++++|.+++ +|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 4445667788889999999999999984 67777888 9999999999997 3343 57899999999999998766
Q ss_pred cccccccccccEEEccCccccCCC--CccccccccccEEEccCCcccCCCccccccccccccccccCcccCcccc-cccc
Q 039137 366 PLEIGESLQLQYLDLSSNYIVGEI--PTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVP-ESLG 442 (912)
Q Consensus 366 ~~~~~~~~~L~~L~L~~N~l~~~~--~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 442 (912)
+. ..+++|++|++++|++++.. +..+.++++|++|++++|++++..+. +..+++|++|++++|.+.+..| ..+.
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~ 418 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFL 418 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhh
Confidence 65 78899999999999998654 77889999999999999999965444 9999999999999999998766 5789
Q ss_pred ccccccEEEecccccccccchhhhcccccceeeccccccC-cccccccccccccccccccCccccCCCcccccccccceE
Q 039137 443 SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG-EKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLH 521 (912)
Q Consensus 443 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 521 (912)
.+++|++|++++|++++..|..+.++++|++|+|++|.++ +.+|..+..+++|+.|++++|++++..|..|..+++|++
T Consensus 419 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 498 (570)
T 2z63_A 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498 (570)
T ss_dssp TCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCE
Confidence 9999999999999999999999999999999999999998 578999999999999999999999999999999999999
Q ss_pred EEccCCccccCCCCC-ccCCCCchhhhccCCccc
Q 039137 522 IDISYNKLEGQIPNS-TTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 522 l~ls~N~l~~~~~~~-~~~~~~~~~~l~~n~~~~ 554 (912)
|++++|++++.+|.. ..+.......+.+|+-.|
T Consensus 499 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 532 (570)
T 2z63_A 499 LNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 532 (570)
T ss_dssp EECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred EeCCCCcCCCCCHHHhhcccCCcEEEecCCcccC
Confidence 999999999877653 233444444566665544
No 28
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-48 Score=415.12 Aligned_cols=246 Identities=22% Similarity=0.354 Sum_probs=197.9
Q ss_pred CCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc----CCeeeE
Q 039137 641 NAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH----PKHSFI 715 (912)
Q Consensus 641 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~~~l 715 (912)
++.+.||+|+||+||+|.++ +++.||+|++...... ....+.|.+|++++++++|||||++++++.+ ++..|+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEE
Confidence 56678999999999999876 6899999998654322 2356789999999999999999999999865 356899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCeEEc-CCCcEEEecccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHRDISSKNVLLD-LGYEAHVSDFGIAK 792 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~Dfgla~ 792 (912)
|||||++|+|.+++.+ .+.+++.++..|+.||+.||+|||++ + |+||||||+|||++ .++.+||+|||+|+
T Consensus 107 vmEy~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 9999999999999954 35689999999999999999999998 6 99999999999998 47899999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
.... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||..... .......+..... +...
T Consensus 181 ~~~~--~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~~~--~~~~ 251 (290)
T 3fpq_A 181 LKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGVK--PASF 251 (290)
T ss_dssp GCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTCC--CGGG
T ss_pred eCCC--CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHcCCC--CCCC
Confidence 6432 34456789999999998865 599999999999999999999999852111 0111111111111 1111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....++++.++|.+||++||++|||++|+++
T Consensus 252 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2223456889999999999999999998865
No 29
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.1e-49 Score=424.70 Aligned_cols=244 Identities=24% Similarity=0.293 Sum_probs=198.0
Q ss_pred cCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
++|++.+.||+|+||+||+|+.. +++.||||++........ ...++.+|++++++++|||||++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE--ECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH--HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEE
Confidence 57999999999999999999863 578899999875432211 234578899999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
|+|||||+||+|.+++.+ .+.+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.
T Consensus 102 ~ivmEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~ 175 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 175 (304)
T ss_dssp EEEECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred EEEEEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence 999999999999999954 35699999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
...........+||+.|||||++.+..|+.++||||+||++|||+||+.||.... .......+.....+.|.
T Consensus 176 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~~~~p~--- 247 (304)
T 3ubd_A 176 SIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----RKETMTMILKAKLGMPQ--- 247 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCT---
T ss_pred ccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----HHHHHHHHHcCCCCCCC---
Confidence 6555555667789999999999999999999999999999999999999986221 11222233334444443
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTM 898 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~ 898 (912)
..+.++.++|.+||++||++|||+
T Consensus 248 -~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 248 -FLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -cCCHHHHHHHHHHcccCHHHCCCC
Confidence 234568899999999999999995
No 30
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-48 Score=426.78 Aligned_cols=267 Identities=22% Similarity=0.364 Sum_probs=215.6
Q ss_pred HHHHHHHhcCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCC-Ccccc
Q 039137 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH-RNIVK 702 (912)
Q Consensus 630 ~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~ 702 (912)
..+++...++|++.+.||+|+||+||+|++. .++.||||++.... .....++|.+|++++++++| ||||+
T Consensus 56 ~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~---~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 56 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc---ChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 3455556789999999999999999999854 23679999987543 22356789999999999965 89999
Q ss_pred EEEEEEcC-CeeeEEEeecCCCChhhHhhccCC-------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeec
Q 039137 703 FYGFCSHP-KHSFIIYEYLESGSLDKILCNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHR 768 (912)
Q Consensus 703 l~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 768 (912)
++|+|.++ +..++|||||++|+|.++++.... ...+++.++..|+.|||+||+|||++ +||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecC
Confidence 99999765 568999999999999999965332 34589999999999999999999999 99999
Q ss_pred CCCCCCeEEcCCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcc
Q 039137 769 DISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRD 845 (912)
Q Consensus 769 Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~ 845 (912)
||||+|||+++++.+||+|||+|+........ .....||+.|||||++.+..|+.++|||||||++|||+| |+.||.
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~ 289 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 289 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999876544332 234678999999999999999999999999999999998 999985
Q ss_pred chhccccccccchhhhcc-CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 846 FLFEMSSSSSNMNIEMLD-SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.... .......+.+ .+.+.|. ..+.++.+++.+||+.||++|||++|+++.|++.+.
T Consensus 290 ~~~~----~~~~~~~i~~g~~~~~p~----~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 290 GVKI----DEEFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp TCCC----SHHHHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCH----HHHHHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 3211 1111111112 2233332 234568899999999999999999999999998764
No 31
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-48 Score=454.21 Aligned_cols=412 Identities=20% Similarity=0.205 Sum_probs=291.4
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 56666777777666665566666667777777777666656666666677777777777666 45555 5666777777
Q ss_pred cCCcCCC-CCCccCCCCccceeeeeccCCCcCcccccccccccc--ceeecccccc--cCcccccccc------------
Q 039137 189 DSNFLNG-SIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSL--FDLELCINQL--SGAIPLSISN------------ 251 (912)
Q Consensus 189 ~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~l~~n~l--~~~~p~~~~~------------ 251 (912)
++|++++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|++++|++ .+..|..+..
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 7776665 356666666677777776666654 345555555 6666666666 5555555554
Q ss_pred --------------ccccceeeecccc-------CcccCCcccCCccccchhhhccCccCCCCccccc---cccccceEe
Q 039137 252 --------------LTNLRFLFLYHNE-------LSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFR---NLTDLVKLR 307 (912)
Q Consensus 252 --------------l~~L~~L~L~~N~-------l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~ 307 (912)
+++|+.|++++|. +.+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|+
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred Ccchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence 4455555555554 333333 445555555555555555432221111 124677777
Q ss_pred cccccccCCCCccc-----CCCCCccEEEccCCcCccccc-ccCCCC---CCCCEEeccCCcccccccccccccccccEE
Q 039137 308 LNQNYLTGNISETF-----GTYPNLTFIDLSNNSFFGEIL-SDWGRC---PQLSLLDVSINNISGSIPLEIGESLQLQYL 378 (912)
Q Consensus 308 L~~n~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L 378 (912)
+++|.+++.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... ....+++|++|
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L 329 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHL 329 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEE
T ss_pred eecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEE
Confidence 77777777777766 7777888888888777 333 233332 56888888888876322 12577889999
Q ss_pred EccCccccCCCCccccccccccEEEccCCcccC--CCccccccccccccccccCcccCc-cccccccccccccEEEeccc
Q 039137 379 DLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSG--CIPRELGSLINLEYLDLSANNLSN-FVPESLGSLVKLYYLNLSHN 455 (912)
Q Consensus 379 ~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N 455 (912)
++++|++++.+|..+.++++|++|++++|++++ .+|..+..+++|++|+|++|++++ +++..+..+++|++|+|++|
T Consensus 330 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N 409 (520)
T 2z7x_B 330 DFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSN 409 (520)
T ss_dssp ECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSS
T ss_pred EeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCC
Confidence 999999998888889999999999999999986 556778889999999999999988 44445888899999999999
Q ss_pred ccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 456 KLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 456 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
++++..|..+. ++|++|+|++|+|+ .+|..+..+++|+.|++++|+|+++.+..|..+++|++|++++|++.|..+
T Consensus 410 ~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 410 ILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 99887777664 78999999999997 567777799999999999999997655558889999999999999988543
No 32
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-47 Score=410.96 Aligned_cols=263 Identities=25% Similarity=0.327 Sum_probs=199.7
Q ss_pred cCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC----ee
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK----HS 713 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~~ 713 (912)
.+|.+.+.||+|+||+||+|++ +|+.||||++... ......+.+|+..+..++|||||+++|++.+++ ..
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~-----~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc-----chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 4688889999999999999998 6899999998532 112223345666677889999999999997654 57
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeeecCCCCCCeEEcCCCcEEEecc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC-----FPPIVHRDISSKNVLLDLGYEAHVSDF 788 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~Nill~~~~~~kl~Df 788 (912)
|+|||||++|+|.++++. ..++++++.+++.|++.||+|||+++ .++|+||||||+|||++.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 999999999999999954 35899999999999999999999762 348999999999999999999999999
Q ss_pred ccccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhCCCCccchhcccc------
Q 039137 789 GIAKFLNPDSSN----WSELAGTHGYVAPELAYTL------KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS------ 852 (912)
Q Consensus 789 gla~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~------ 852 (912)
|+|+........ .....||+.|||||++.+. .++.++|||||||++|||+||..||........
T Consensus 153 Gla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~ 232 (303)
T 3hmm_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp TTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTS
T ss_pred CCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcc
Confidence 999876544322 2345799999999998764 367899999999999999999887642211100
Q ss_pred ----ccccchhhhccCCC--CCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 853 ----SSSNMNIEMLDSRL--PYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 853 ----~~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.............. ..|. .........+.+++.+||+.||++||||.||++.|++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 233 PSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 00011111112211 1221 1223455678899999999999999999999999988654
No 33
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.7e-47 Score=409.92 Aligned_cols=250 Identities=22% Similarity=0.433 Sum_probs=194.0
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC-----
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK----- 711 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----- 711 (912)
++|++.+.||+|+||+||+|+++ +|+.||||++.... .....+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 81 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKL 81 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-----
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccc
Confidence 46999999999999999999876 79999999986542 2335678999999999999999999999986543
Q ss_pred -------eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEE
Q 039137 712 -------HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAH 784 (912)
Q Consensus 712 -------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 784 (912)
..|+|||||++|+|.+++.........++..++.|+.||+.||+|||++ +|+||||||+|||++.++.+|
T Consensus 82 ~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 82 QPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp -----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred cccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 3699999999999999997665556677788999999999999999999 999999999999999999999
Q ss_pred EeccccccccCCCCC------------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc
Q 039137 785 VSDFGIAKFLNPDSS------------NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS 852 (912)
Q Consensus 785 l~Dfgla~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~ 852 (912)
|+|||+|+....... .....+||+.|||||++.+..|+.++||||+||++|||++ ||....+.
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~-- 233 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMER-- 233 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHH--
Confidence 999999987654322 1234579999999999999999999999999999999996 76421110
Q ss_pred ccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 853 SSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......... ..++ ......+...++|.+||++||++|||+.|+++
T Consensus 234 --~~~~~~~~~~--~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 234 --VRTLTDVRNL--KFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --HHHHHHHHTT--CCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHHHHhcC--CCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0111111122 2222 23344556778999999999999999999875
No 34
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8.3e-47 Score=445.92 Aligned_cols=459 Identities=23% Similarity=0.208 Sum_probs=369.6
Q ss_pred eEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEecccccccccccccccccc
Q 039137 78 IFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLT 157 (912)
Q Consensus 78 v~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~ 157 (912)
..|...+ | .+..+.++. .+++ .+ .++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+.++
T Consensus 2 ~~C~~~~-~--c~~~~~~l~-~ip~-~~--~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~ 74 (549)
T 2z81_A 2 LSCDASG-V--CDGRSRSFT-SIPS-GL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLG 74 (549)
T ss_dssp CEECTTS-E--EECTTSCCS-SCCS-CC--CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred ccCCCCc-e--EECCCCccc-cccc-cC--CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccc
Confidence 3587544 3 455555544 2222 22 37899999999999999899999999999999999999988889999999
Q ss_pred ccceeecccccccCCCCccccCcccccEEEccCCcCCC-CCCccCCCCccceeeeeccCCCcCccc-cccccccccceee
Q 039137 158 HLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNNSFFGSIP-QEIGNLKSLFDLE 235 (912)
Q Consensus 158 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~ 235 (912)
+|++|+|++|.+++..|..|+.+++|++|++++|++++ .+|..++++++|++|++++|.+.+.+| ..++++++|++|+
T Consensus 75 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 75 SLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp TCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred cCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 99999999999998777789999999999999999987 467899999999999999999655665 6899999999999
Q ss_pred cccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCC--c-cccccccccceEeccccc
Q 039137 236 LCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTV--P-KSFRNLTDLVKLRLNQNY 312 (912)
Q Consensus 236 l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~-~~~~~l~~L~~L~L~~n~ 312 (912)
+++|++++..|..++.+++|++|+++.|.+.......+..+++|++|++++|++++.. | .....+++|+.|++++|.
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred ccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 9999999999999999999999999999987543333467899999999999999752 2 234567899999999999
Q ss_pred ccCCCC----cccCCCCCccEEEccCCcCccccc------ccCC-----------------------------CCCCCCE
Q 039137 313 LTGNIS----ETFGTYPNLTFIDLSNNSFFGEIL------SDWG-----------------------------RCPQLSL 353 (912)
Q Consensus 313 l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~~------~~~~-----------------------------~l~~L~~ 353 (912)
+++..+ ..+..+++|+.+++++|.+.+... ..+. .+++|+.
T Consensus 235 l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~ 314 (549)
T 2z81_A 235 LTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKR 314 (549)
T ss_dssp EEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCE
T ss_pred cchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceE
Confidence 886443 345678899999999998765311 0111 1356788
Q ss_pred EeccCCcccccccccc-cccccccEEEccCccccCCCCc---cccccccccEEEccCCcccCCCc--ccccccccccccc
Q 039137 354 LDVSINNISGSIPLEI-GESLQLQYLDLSSNYIVGEIPT---QLGNIIYLNRLSLSGNKLSGCIP--RELGSLINLEYLD 427 (912)
Q Consensus 354 L~Ls~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~~~---~l~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~ 427 (912)
|++++|++. .+|..+ ..+++|++|+|++|++++.+|. .++.+++|++|++++|++++..+ ..+..+++|++|+
T Consensus 315 L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~ 393 (549)
T 2z81_A 315 ITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLD 393 (549)
T ss_dssp EEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEE
T ss_pred EEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEE
Confidence 888888876 566555 5788999999999999876643 47788999999999999986533 5688899999999
Q ss_pred ccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccC
Q 039137 428 LSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSG 507 (912)
Q Consensus 428 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 507 (912)
+++|+++. +|..+..+++|++|+|++|++++ +|..+. ++|++|+|++|+|++.+ ..+++|+.|+|++|+|+.
T Consensus 394 Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~ 465 (549)
T 2z81_A 394 ISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKT 465 (549)
T ss_dssp CTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSS
T ss_pred CCCCCCcc-CChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccCc
Confidence 99999985 67788889999999999999974 444432 68999999999998753 578999999999999995
Q ss_pred CCcccccccccceEEEccCCccccCCCCC-ccCCCCchhhhccCCccc
Q 039137 508 LIPRCFEEMHGLLHIDISYNKLEGQIPNS-TTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 508 ~~p~~~~~l~~L~~l~ls~N~l~~~~~~~-~~~~~~~~~~l~~n~~~~ 554 (912)
+ |. ...+++|+.|++++|++++.+|.. ..+.......+.+|+-.|
T Consensus 466 i-p~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 466 L-PD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp C-CC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred C-CC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 4 54 467899999999999999877753 344444444566665433
No 35
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-46 Score=439.73 Aligned_cols=425 Identities=22% Similarity=0.212 Sum_probs=335.5
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCC
Q 039137 112 VYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSN 191 (912)
Q Consensus 112 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 191 (912)
++||+++|+++ .+|..+. ++|++|||++|++++..|..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 47999999999 5888776 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cCCCCCCccCCCCccceeeeeccCCCcC-ccccccccccccceeecccccccCcccccccccccc--ceeeeccccC--c
Q 039137 192 FLNGSIPRSLGNLTHVVILYLYNNSFFG-SIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNL--RFLFLYHNEL--S 266 (912)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l--~ 266 (912)
+++ .+|.. .+++|++|+|++|.+++ .+|..++++++|++|++++|++++ ..+..+++| ++|++++|++ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 999 67777 89999999999999997 578999999999999999999986 457778888 9999999999 7
Q ss_pred ccCCcccCC--------------------------ccccchhhhccCc-------cCCCCccccccccccceEecccccc
Q 039137 267 GIIPQEIGN--------------------------LKKLNSLLLAKNH-------FRGTVPKSFRNLTDLVKLRLNQNYL 313 (912)
Q Consensus 267 ~~~~~~l~~--------------------------l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~n~l 313 (912)
+..|..+.. +++|+.|++++|. +.+.+| .+..+++|+.|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 777777766 4455555555554 443333 455556666666666555
Q ss_pred cCCCCccc---CCCCCccEEEccCCcCcccccccC-----CCCCCCCEEeccCCccccccc-cccccc---ccccEEEcc
Q 039137 314 TGNISETF---GTYPNLTFIDLSNNSFFGEILSDW-----GRCPQLSLLDVSINNISGSIP-LEIGES---LQLQYLDLS 381 (912)
Q Consensus 314 ~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~-~~~~~~---~~L~~L~L~ 381 (912)
++..+..+ ...++|++|++++|++.+.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 43221111 013467777777777776667666 6777777777777777 344 333333 467888888
Q ss_pred CccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCc--cccccccccccccEEEeccccccc
Q 039137 382 SNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN--FVPESLGSLVKLYYLNLSHNKLSQ 459 (912)
Q Consensus 382 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~ 459 (912)
+|.+.+.. .+..+++|++|++++|++++..|..+..+++|++|+|++|++++ ..|..+..+++|++|+|++|++++
T Consensus 311 ~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 311 GTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 88776432 12678899999999999999899999999999999999999997 456789999999999999999998
Q ss_pred ccch-hhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCCCC--
Q 039137 460 QIPI-ELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS-- 536 (912)
Q Consensus 460 ~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~-- 536 (912)
.+|. .+..+++|++|++++|++++..|..+. ++|+.|++++|+|+ .+|..+..+++|++|++++|+++. +|..
T Consensus 389 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~ 464 (520)
T 2z7x_B 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIF 464 (520)
T ss_dssp CGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTT
T ss_pred ccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHh
Confidence 5665 488899999999999999988777664 79999999999999 457667799999999999999995 4432
Q ss_pred ccCCCCchhhhccCCccc
Q 039137 537 TTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 537 ~~~~~~~~~~l~~n~~~~ 554 (912)
..+.......+.+|+-.|
T Consensus 465 ~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 465 DRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp TTCTTCCEEECCSSCBCC
T ss_pred ccCCcccEEECcCCCCcc
Confidence 233333334455665433
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.1e-44 Score=431.80 Aligned_cols=419 Identities=21% Similarity=0.224 Sum_probs=218.4
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEcc
Q 039137 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALD 189 (912)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 189 (912)
++++|||++|+|++..|.+|.++++|++|||++|+|++..|.+|++|++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 45566666666655555556666666666666666654444555566666666666666654444455566666666666
Q ss_pred CCcCCCCCCccCCCCccceeeeeccCCCcC-ccccccccccccceeecccccccCccccccccccccc----eeeecccc
Q 039137 190 SNFLNGSIPRSLGNLTHVVILYLYNNSFFG-SIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLR----FLFLYHNE 264 (912)
Q Consensus 190 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~----~L~L~~N~ 264 (912)
+|++++..+..|+++++|++|+|++|.+++ .+|..++++++|++|++++|++++..|..+..+.+++ .++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 666654444455666666666666665543 2455555566666666666666555555554444332 34444554
Q ss_pred CcccCCcccCCc--------------------------------------------------------------------
Q 039137 265 LSGIIPQEIGNL-------------------------------------------------------------------- 276 (912)
Q Consensus 265 l~~~~~~~l~~l-------------------------------------------------------------------- 276 (912)
++.+.+..+..+
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred ccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence 443322222111
Q ss_pred -------------cccchhhhccCccCCCCccccccccccceEecccccccCCCCccc-------------------CCC
Q 039137 277 -------------KKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETF-------------------GTY 324 (912)
Q Consensus 277 -------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~-------------------~~l 324 (912)
.+++.+++.+|.+... ..+....+|+.|++.+|.+.+..+..+ ..+
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l 370 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 370 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC
T ss_pred ccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc
Confidence 1111122222221111 112233445555555555543332211 123
Q ss_pred CCccEEEccCCcCccc--ccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCC-ccccccccccE
Q 039137 325 PNLTFIDLSNNSFFGE--ILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIP-TQLGNIIYLNR 401 (912)
Q Consensus 325 ~~L~~L~Ls~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~ 401 (912)
++|+.|++++|.+... .+..+..+.+|+.++++.|.+. ..+..+..+++|+.+++++|......+ ..+..+.+++.
T Consensus 371 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 371 PSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp TTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred cccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccccc
Confidence 3444444444443221 1222233344444444444443 223344455555555555555443322 34455556666
Q ss_pred EEccCCcccCCCccccccccccccccccCccc-CccccccccccccccEEEecccccccccchhhhcccccceeeccccc
Q 039137 402 LSLSGNKLSGCIPRELGSLINLEYLDLSANNL-SNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 480 (912)
Q Consensus 402 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 480 (912)
++++.|++.+..+..+..++.|+.|+|++|++ .+..|..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~ 529 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 529 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCc
Confidence 66666666655555666666666666666653 33455556666666666666666666566666666666666666666
Q ss_pred cCcccccccccccccccccccCccccCCCccccccc-ccceEEEccCCcccc
Q 039137 481 LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEM-HGLLHIDISYNKLEG 531 (912)
Q Consensus 481 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~l~ls~N~l~~ 531 (912)
|++..+..|..+++|+.|+|++|+|++..|..|..+ ++|++|++++|+|.|
T Consensus 530 l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 530 FFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 666666666666666666666666666666666655 456666666666665
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-44 Score=428.00 Aligned_cols=429 Identities=20% Similarity=0.198 Sum_probs=334.1
Q ss_pred EEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeeccc
Q 039137 87 VGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISR 166 (912)
Q Consensus 87 ~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 166 (912)
..++++++++.+ ++. .+ .++|++|+|++|++++..|..|.++++|++|+|++|++++..|+.|+++++|++|+|++
T Consensus 34 ~~l~ls~~~L~~-ip~-~~--~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPK-DL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CEEECTTSCCCS-CCT-TS--CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred cEEEcCCCCCcc-CCC-CC--CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 456777777664 332 22 27899999999999988888999999999999999999988889999999999999999
Q ss_pred ccccCCCCccccCcccccEEEccCCcCCC-CCCccCCCCccceeeeeccCCCcCcccccccccccc--ceeecccccc--
Q 039137 167 NWLSGSIPHEVGQLTVLNQLALDSNFLNG-SIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSL--FDLELCINQL-- 241 (912)
Q Consensus 167 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~l~~n~l-- 241 (912)
|+++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++. .+..+++| +.|++++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9998 77877 89999999999999986 4568999999999999999999863 45555666 9999999999
Q ss_pred cCcccccccccc--ccceeeeccccCcccCCc-ccCCccccchhhhccCcc-----CCCCccccccc-------------
Q 039137 242 SGAIPLSISNLT--NLRFLFLYHNELSGIIPQ-EIGNLKKLNSLLLAKNHF-----RGTVPKSFRNL------------- 300 (912)
Q Consensus 242 ~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l-----~~~~~~~~~~l------------- 300 (912)
++..|..+..+. .| .++++.|.+.+.++. .+.++++|+.|++++|+. .+. ...|..+
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcC
Confidence 888888877754 33 456677777664443 355677777777777641 110 1112222
Q ss_pred --------------cccceEecccccccCCCCccc-----CCCCCccEEEccCCcCccccc-ccCC---CCCCCCEEecc
Q 039137 301 --------------TDLVKLRLNQNYLTGNISETF-----GTYPNLTFIDLSNNSFFGEIL-SDWG---RCPQLSLLDVS 357 (912)
Q Consensus 301 --------------~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~-~~~~---~l~~L~~L~Ls 357 (912)
++|++|++++|.+++.+|..+ ..++.|+.++++.|.+ .+| ..+. ...+|+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~ 339 (562)
T 3a79_B 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSIS 339 (562)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEE
T ss_pred cHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEcc
Confidence 367777777777776666655 5566666666666655 222 1111 12568888888
Q ss_pred CCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCC--CccccccccccccccccCcccCc
Q 039137 358 INNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGC--IPRELGSLINLEYLDLSANNLSN 435 (912)
Q Consensus 358 ~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~ 435 (912)
+|.+.... ....+++|++|++++|++++.+|..+.++++|++|++++|++++. +|..+..+++|++|++++|++++
T Consensus 340 ~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 340 DTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS
T ss_pred CCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC
Confidence 88875322 126788999999999999998999999999999999999999963 35678999999999999999998
Q ss_pred -cccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCccccc
Q 039137 436 -FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE 514 (912)
Q Consensus 436 -~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 514 (912)
+.+..+..+++|++|+|++|++++..|..+. ++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|+++.+..|.
T Consensus 418 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 494 (562)
T 3a79_B 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFD 494 (562)
T ss_dssp CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTT
T ss_pred ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHh
Confidence 5555688999999999999999887776654 78999999999997 4666666999999999999999976555599
Q ss_pred ccccceEEEccCCccccCCC
Q 039137 515 EMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 515 ~l~~L~~l~ls~N~l~~~~~ 534 (912)
.+++|+.|++++|+|.|..+
T Consensus 495 ~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 495 RLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TCTTCCCEECCSCCBCCCHH
T ss_pred cCCCCCEEEecCCCcCCCcc
Confidence 99999999999999998655
No 38
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-44 Score=402.85 Aligned_cols=257 Identities=22% Similarity=0.326 Sum_probs=200.0
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC------
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP------ 710 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 710 (912)
++|++.+.||+|+||+||+|+++ +|+.||||++...... ....+.+.+|+++|+.++|||||++++++...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV--VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS--HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc--hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence 57999999999999999999876 7999999999754332 23567789999999999999999999998643
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
+..|+|||||+ |+|.+++. ..+.+++.++..+++||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 57999984 345799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----CCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCccchhcccccc---------c-
Q 039137 791 AKFLNPD----SSNWSELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS---------S- 855 (912)
Q Consensus 791 a~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~---------~- 855 (912)
|+.+... .......+||+.|||||++.+.. ++.++||||+||++|||++|++||.......... .
T Consensus 205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284 (398)
T ss_dssp CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCG
T ss_pred eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence 9876432 22345678999999999988754 6999999999999999999999996321100000 0
Q ss_pred --------cchhhhcc---CCCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 --------NMNIEMLD---SRLPYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 --------~~~~~~~~---~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
........ ...+.+. ......+..+.++|.+||+.||++|||++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000 0111110 001122456889999999999999999998764
No 39
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=7.1e-44 Score=410.51 Aligned_cols=391 Identities=21% Similarity=0.207 Sum_probs=286.6
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCC-CccccCcccccEEEccC
Q 039137 112 VYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSI-PHEVGQLTVLNQLALDS 190 (912)
Q Consensus 112 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~-p~~~~~l~~L~~L~l~~ 190 (912)
+.++.++++++ .+|. +. ++|++|||++|++++..|..|+.+++|++|+|++|.+.+.+ |..|+++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 46788888887 5665 33 78999999999998878888999999999999999887665 56788888888998888
Q ss_pred CcCCCCCCccCCCCccceeeeeccCCCcCccccc--cccccccceeecccccccCccccc-cccccccceeeeccccCcc
Q 039137 191 NFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQE--IGNLKSLFDLELCINQLSGAIPLS-ISNLTNLRFLFLYHNELSG 267 (912)
Q Consensus 191 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~--~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~L~~N~l~~ 267 (912)
|++++..|..|+++++|++|+|++|.+++.+|.. ++++++|++|++++|++++..|.. +.++++|++|++++|++++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 8888777888888888888888888888755554 777777888888777777666655 6777777777777777777
Q ss_pred cCCcccCCc--cccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccC
Q 039137 268 IIPQEIGNL--KKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDW 345 (912)
Q Consensus 268 ~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 345 (912)
..+..+..+ .+|+.|++++|.+.+..+..+.. .....+..+++|++|++++|++.+..+..+
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~----------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 232 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW----------------EKCGNPFKNTSITTLDLSGNGFKESMAKRF 232 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH----------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHH
T ss_pred cChhhhhccccccccccccccCcccccchhhccc----------------cccccccccceeeeEecCCCcccccchhhh
Confidence 666666655 45666666666665443332210 000112234455555555555554444433
Q ss_pred CC---CCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccc--cccccEEEccCCcccCCCccccccc
Q 039137 346 GR---CPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGN--IIYLNRLSLSGNKLSGCIPRELGSL 420 (912)
Q Consensus 346 ~~---l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~--l~~L~~L~L~~N~l~~~~p~~~~~l 420 (912)
.. .++|+.|++++|.+.+.. +..+.+.+..+..+.. .++|+.|++++|++++..|..+..+
T Consensus 233 ~~~~~~~~L~~L~l~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 298 (455)
T 3v47_A 233 FDAIAGTKIQSLILSNSYNMGSS--------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHF 298 (455)
T ss_dssp HHHTTTCCEEEEECTTCTTTSCC--------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTC
T ss_pred hccccccceeeEeeccccccccc--------------cchhhhccCcccccccccccCceEEEecCccccccchhhcccC
Confidence 22 245555555555443221 1112222222222332 2578888888888888788888888
Q ss_pred cccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccc
Q 039137 421 INLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 500 (912)
Q Consensus 421 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 500 (912)
++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|++
T Consensus 299 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 378 (455)
T 3v47_A 299 TDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELAL 378 (455)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEEC
Confidence 88888888888888888888888899999999999998888888888999999999999998888888999999999999
Q ss_pred cCccccCCCcccccccccceEEEccCCccccCCCCC
Q 039137 501 SYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS 536 (912)
Q Consensus 501 s~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~ 536 (912)
++|+|++..+..|..+++|+.|++++|+++|.+|..
T Consensus 379 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 379 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCCccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999999888888889999999999999999988754
No 40
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=8.8e-44 Score=409.73 Aligned_cols=364 Identities=23% Similarity=0.261 Sum_probs=284.4
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEecccccccccc-ccccccccccceeecccccccCCCCccccCcccccEEE
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQI-PSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLA 187 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 187 (912)
++|++|+|++|++++..|..|+++++|++|+|++|.+.+.+ |..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999988999999999999999999998666 56799999999999999999988899999999999999
Q ss_pred ccCCcCCCCCCcc--CCCCccceeeeeccCCCcCccccc-cccccccceeecccccccCccccccccc--cccceeeecc
Q 039137 188 LDSNFLNGSIPRS--LGNLTHVVILYLYNNSFFGSIPQE-IGNLKSLFDLELCINQLSGAIPLSISNL--TNLRFLFLYH 262 (912)
Q Consensus 188 l~~n~l~~~~p~~--~~~l~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l--~~L~~L~L~~ 262 (912)
|++|++++.+|.. ++++++|++|+|++|.+++..|.. ++++++|++|++++|++++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866665 999999999999999999888876 8999999999999999999999888877 7999999999
Q ss_pred ccCcccCCcccC--------CccccchhhhccCccCCCCccccccc---cccceEecccccccCCCCcccCCCCCccEEE
Q 039137 263 NELSGIIPQEIG--------NLKKLNSLLLAKNHFRGTVPKSFRNL---TDLVKLRLNQNYLTGNISETFGTYPNLTFID 331 (912)
Q Consensus 263 N~l~~~~~~~l~--------~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 331 (912)
|.+.+..+..+. .+++|++|++++|++++..|..+... ++|+.|++++|.+.+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~---------------- 253 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMG---------------- 253 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTS----------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccc----------------
Confidence 999976554432 44566666666666665555555443 445555555544332
Q ss_pred ccCCcCcccccccCCCCCCCCEEeccCCcccccccccccc--cccccEEEccCccccCCCCccccccccccEEEccCCcc
Q 039137 332 LSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGE--SLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKL 409 (912)
Q Consensus 332 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 409 (912)
... ..+.+....+..+.. .++|++|++++|++++..|..+..+++|++|++++|++
T Consensus 254 --------~~~--------------~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 311 (455)
T 3v47_A 254 --------SSF--------------GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEI 311 (455)
T ss_dssp --------CCT--------------TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred --------ccc--------------chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcc
Confidence 111 111111111122222 24677777777777766677777777777777777777
Q ss_pred cCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccccc
Q 039137 410 SGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRI 489 (912)
Q Consensus 410 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 489 (912)
++..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|
T Consensus 312 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 391 (455)
T 3v47_A 312 NKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIF 391 (455)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred cccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHh
Confidence 77667777777778888888888877777777778888888888888877777778888888888888888877777777
Q ss_pred ccccccccccccCccccCCCc
Q 039137 490 CRMESLEKLNLSYNNLSGLIP 510 (912)
Q Consensus 490 ~~l~~L~~L~ls~N~l~~~~p 510 (912)
..+++|+.|++++|++++..|
T Consensus 392 ~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 392 DRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCTTCCEEECCSSCBCCCTT
T ss_pred ccCCcccEEEccCCCcccCCC
Confidence 788888888888888887766
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=9.4e-44 Score=391.58 Aligned_cols=198 Identities=28% Similarity=0.369 Sum_probs=171.0
Q ss_pred HHHHhcCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEE
Q 039137 633 IISATNDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFC 707 (912)
Q Consensus 633 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 707 (912)
+....++|++.+.||+|+||+||+|+++ +++.||+|++.... ...++.+|+++++.+ +||||+++++++
T Consensus 16 ~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------~~~~~~~E~~~l~~~~~h~nIv~l~~~~ 89 (361)
T 4f9c_A 16 VPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------HPIRIAAELQCLTVAGGQDNVMGVKYCF 89 (361)
T ss_dssp SGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------CHHHHHHHHHHHHHTCSBTTBCCCSEEE
T ss_pred cCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------CHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence 3345688999999999999999999753 46789999986432 245678999999998 699999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC-CcEEEe
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG-YEAHVS 786 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~ 786 (912)
.+.++.|+||||+++|+|.+++ +.+++.+++.+++|++.||+|||++ +|+||||||+|||++.+ +.+||+
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~------~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDIL------NSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHH------TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEEC
T ss_pred EECCEEEEEEeCCCcccHHHHH------cCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEEC
Confidence 9999999999999999999998 2488999999999999999999999 99999999999999876 799999
Q ss_pred ccccccccCCCCC----------------------------CccccccccccccccccccC-CCCcchhHHHHHHHHHHH
Q 039137 787 DFGIAKFLNPDSS----------------------------NWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEV 837 (912)
Q Consensus 787 Dfgla~~~~~~~~----------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~el 837 (912)
|||+|+....... .....+||+.|+|||++.+. .++.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999986543211 12345799999999998875 489999999999999999
Q ss_pred HhCCCCcc
Q 039137 838 IKGKHPRD 845 (912)
Q Consensus 838 ltg~~pf~ 845 (912)
++|+.||.
T Consensus 241 l~G~~Pf~ 248 (361)
T 4f9c_A 241 LSGRYPFY 248 (361)
T ss_dssp HHTCSSSS
T ss_pred HHCCCCCC
Confidence 99999984
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2e-43 Score=412.77 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=212.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+++ +|+.||+|++.... ....+.+.+|+++|+.++|||||++++++.+++..|+
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 368999999999999999999876 79999999986532 2246778899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC--CcEEEeccccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG--YEAHVSDFGIAKF 793 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~--~~~kl~Dfgla~~ 793 (912)
|||||+||+|.+++.. ....+++.++..+++||+.||+|||++ +|+||||||+||+++.+ +.+||+|||+|+.
T Consensus 232 v~E~~~gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 232 IYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEECCCCCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEeecCCCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 9999999999999843 235689999999999999999999999 99999999999999854 8999999999998
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
+... ......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+......++....
T Consensus 307 ~~~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~ 380 (573)
T 3uto_A 307 LDPK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----DETLRNVKSCDWNMDDSAF 380 (573)
T ss_dssp CCTT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHTTCCCCCSGGG
T ss_pred ccCC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-----HHHHHHHHhCCCCCCcccc
Confidence 7543 334566899999999999999999999999999999999999999862211 1122223333333444344
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+..+.++|.+||+.||.+|||+.|+++
T Consensus 381 ~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 381 SGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 455667889999999999999999999875
No 43
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.6e-42 Score=415.02 Aligned_cols=430 Identities=24% Similarity=0.251 Sum_probs=341.1
Q ss_pred CCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCC
Q 039137 118 NNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSI 197 (912)
Q Consensus 118 ~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 197 (912)
+.+++ .+|..+. +++++|||++|+|++..|..|.++++|++|+|++|++++..|..|++|++|++|+|++|+|++..
T Consensus 40 ~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~ 116 (635)
T 4g8a_A 40 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLA 116 (635)
T ss_dssp TSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEEC
T ss_pred CCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCC
Confidence 33454 4666553 47999999999999777789999999999999999999777888999999999999999999777
Q ss_pred CccCCCCccceeeeeccCCCcCccccccccccccceeecccccccC-ccccccccccccceeeeccccCcccCCcccCCc
Q 039137 198 PRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSG-AIPLSISNLTNLRFLFLYHNELSGIIPQEIGNL 276 (912)
Q Consensus 198 p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l 276 (912)
+..|.++++|++|+|++|++++..+..|+++++|++|++++|++++ ..|..++.+++|++|+|++|++++..+..|..+
T Consensus 117 ~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L 196 (635)
T 4g8a_A 117 LGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVL 196 (635)
T ss_dssp GGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHH
T ss_pred HHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccch
Confidence 7889999999999999999998777889999999999999999975 468889999999999999999999888888777
Q ss_pred cccc----hhhhccCccCCCCccccccccccceEecccc-----------------------------------------
Q 039137 277 KKLN----SLLLAKNHFRGTVPKSFRNLTDLVKLRLNQN----------------------------------------- 311 (912)
Q Consensus 277 ~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n----------------------------------------- 311 (912)
++++ .++++.|.++...+..+.. ..++.+++.+|
T Consensus 197 ~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~ 275 (635)
T 4g8a_A 197 HQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSAL 275 (635)
T ss_dssp HTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTT
T ss_pred hhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhcccccccccchhhcCCccccccccccccccccccccccccccc
Confidence 6654 4667777776443333322 12233333322
Q ss_pred -----------------------------------------cccCCCCcccCCCCCccEEEccCCcCcccccc-------
Q 039137 312 -----------------------------------------YLTGNISETFGTYPNLTFIDLSNNSFFGEILS------- 343 (912)
Q Consensus 312 -----------------------------------------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~------- 343 (912)
.+... ..+....+|+.|++++|.+......
T Consensus 276 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~ 353 (635)
T 4g8a_A 276 EGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQHLELVNCKFGQFPTLKLKSLKR 353 (635)
T ss_dssp GGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSEEEEESCEESSCCCCBCTTCCE
T ss_pred ccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccc--cccccchhhhhhhcccccccCcCcccchhhhh
Confidence 22211 1233345667777777765443222
Q ss_pred ------------cCCCCCCCCEEeccCCcccc--cccccccccccccEEEccCccccCCCCccccccccccEEEccCCcc
Q 039137 344 ------------DWGRCPQLSLLDVSINNISG--SIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKL 409 (912)
Q Consensus 344 ------------~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 409 (912)
....+++|+.|++++|.+.. ..+..+..+.+|++|+++.|.+.. .+..+..+++|+.+++.+|+.
T Consensus 354 l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~ 432 (635)
T 4g8a_A 354 LTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNL 432 (635)
T ss_dssp EEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEE
T ss_pred cccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccc
Confidence 22346677777777777753 334455566778888888777763 456677888999999998887
Q ss_pred cCCCc-cccccccccccccccCcccCccccccccccccccEEEeccccc-ccccchhhhcccccceeeccccccCccccc
Q 039137 410 SGCIP-RELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKL-SQQIPIELDNLIHLSELDLSHNFLGEKISS 487 (912)
Q Consensus 410 ~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 487 (912)
....+ ..+..+++++.++++.|.+.+..+..+..++.|+.|+|++|++ .+..|..|..+++|++|+|++|+|++.+|.
T Consensus 433 ~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~ 512 (635)
T 4g8a_A 433 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 512 (635)
T ss_dssp ESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChH
Confidence 75544 5678899999999999999999999999999999999999985 456788999999999999999999999999
Q ss_pred ccccccccccccccCccccCCCcccccccccceEEEccCCccccCCCCCc-cC-CCCchhhhccCCccc
Q 039137 488 RICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNST-TF-RDAPLEALQGNKGLY 554 (912)
Q Consensus 488 ~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~~-~~-~~~~~~~l~~n~~~~ 554 (912)
.|.++++|+.|+|++|+|+++.|..|..+++|++||+++|++++.+|... .+ .......+.+||-.|
T Consensus 513 ~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 513 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp TTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred HHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 99999999999999999999999999999999999999999999888643 22 233344567777666
No 44
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-43 Score=385.17 Aligned_cols=292 Identities=27% Similarity=0.446 Sum_probs=170.3
Q ss_pred CCCHHHHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCCCc--cceeEecCC---CCeEEEeeccccccc--ccccccc
Q 039137 33 SNSAEEAHALVKWKASLEVHSRSLLHSWSLSSVNATKISPCA--WSGIFCNHA---ERVVGINLTSISLNG--TLLEFSF 105 (912)
Q Consensus 33 ~~~~~~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~C~--w~gv~c~~~---~~v~~l~l~~~~l~~--~~~~~~~ 105 (912)
.|.++|++||++||+++. +|. .+++|.. +.+||. |.||+|+.. ++|+.+++.++.+.| .++ .+|
T Consensus 2 ~c~~~~~~aL~~~k~~~~-~~~-~l~~W~~------~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~-~~l 72 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLG-NPT-TLSSWLP------TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIP-SSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTT-CCG-GGTTCCT------TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECC-GGG
T ss_pred CCCHHHHHHHHHHHHhcC-Ccc-cccCCCC------CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccC-hhH
Confidence 589999999999999995 454 7899964 258998 999999753 567766666555555 332 345
Q ss_pred CCCCCccEEEccC-CcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCccccc
Q 039137 106 SSFPHLVYLDLYN-NELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLN 184 (912)
Q Consensus 106 ~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 184 (912)
+++++|++|+|++ |++.+.+|..|+++++|++|+|++|++++.+|..|+.+++|++|+|++|.+++.+|..++.+++|+
T Consensus 73 ~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 152 (313)
T 1ogq_A 73 ANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLV 152 (313)
T ss_dssp GGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred hCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCC
Confidence 5555555555553 555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred EEEccCCcCCCCCCccCCCCc-cceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccc
Q 039137 185 QLALDSNFLNGSIPRSLGNLT-HVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHN 263 (912)
Q Consensus 185 ~L~l~~n~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 263 (912)
+|++++|++++.+|..+.+++ +|++|++++|.+++.+|..++.++ |+.|++++|++++..|..+..+++|++|+|++|
T Consensus 153 ~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 231 (313)
T 1ogq_A 153 GITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231 (313)
T ss_dssp EEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSS
T ss_pred eEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCC
Confidence 555555555555555555554 555555555555555555555444 555555555554444444445555555555555
Q ss_pred cCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccc
Q 039137 264 ELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILS 343 (912)
Q Consensus 264 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 343 (912)
++++ .+|. +..+++|++|+|++|.+++.+|..|..+++|++|+|++|++++.+|.
T Consensus 232 ~l~~------------------------~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 232 SLAF------------------------DLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EECC------------------------BGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred ceee------------------------ecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 4443 3333 44445555555555555555555555555555555555555555544
Q ss_pred cCCCCCCCCEEeccCCc
Q 039137 344 DWGRCPQLSLLDVSINN 360 (912)
Q Consensus 344 ~~~~l~~L~~L~Ls~N~ 360 (912)
. +.+++|+.+++++|.
T Consensus 287 ~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNK 302 (313)
T ss_dssp S-TTGGGSCGGGTCSSS
T ss_pred C-ccccccChHHhcCCC
Confidence 3 455555555555555
No 45
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.5e-43 Score=407.26 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=200.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCC--CchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPG--EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
.++|++.+.||+|+||+||+|+++ +|+.||+|++.+.... ...........++.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999876 7999999998542111 1111112223446677788999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
|+|||||+||+|.+++.+ .+.+++.+++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.
T Consensus 268 ylVmEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~ 341 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 341 (689)
T ss_dssp EEEECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeee
Confidence 999999999999999954 35699999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccc-cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAY-TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
.... .....+||+.|||||++. +..|+.++||||+||++|||++|++||....... ..............++.
T Consensus 342 ~~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i~~~~~~~p~-- 415 (689)
T 3v5w_A 342 FSKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMAVELPD-- 415 (689)
T ss_dssp CSSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHHHHCCCCCCT--
T ss_pred cCCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhhcCCCCCCCc--
Confidence 6543 334578999999999996 4579999999999999999999999996321111 11112223333334432
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC-----HHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPT-----MKRVS 902 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl 902 (912)
..+.++.++|.+||++||.+|++ ++|++
T Consensus 416 --~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 416 --SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp --TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred --cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 23456889999999999999998 56554
No 46
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-42 Score=409.95 Aligned_cols=426 Identities=18% Similarity=0.175 Sum_probs=335.1
Q ss_pred ccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccC
Q 039137 111 LVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDS 190 (912)
Q Consensus 111 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 190 (912)
.+++|+++|++++ +|..+. ++|++|||++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 33 ~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 33 ESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 4789999999995 787665 8999999999999988888999999999999999999988899999999999999999
Q ss_pred CcCCCCCCccCCCCccceeeeeccCCCcC-ccccccccccccceeecccccccCcccccccccccc--ceeeeccccC--
Q 039137 191 NFLNGSIPRSLGNLTHVVILYLYNNSFFG-SIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNL--RFLFLYHNEL-- 265 (912)
Q Consensus 191 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L--~~L~L~~N~l-- 265 (912)
|+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|++
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 9999 78877 89999999999999997 4578999999999999999999863 45555666 9999999999
Q ss_pred cccCCcccCCcc--ccchhhhccCccCCCCcc-ccccccccceEeccccc-----ccCCCCcccCCCC------------
Q 039137 266 SGIIPQEIGNLK--KLNSLLLAKNHFRGTVPK-SFRNLTDLVKLRLNQNY-----LTGNISETFGTYP------------ 325 (912)
Q Consensus 266 ~~~~~~~l~~l~--~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~n~-----l~~~~~~~~~~l~------------ 325 (912)
++..|..+..+. .+ .+++++|.+.+.++. .+..+++|+.|++++|. +.+. ...+..++
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~-~~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTF-LSELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHH-HHHHHSCSSCEEEEEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHH-HHHHhccCcceEEEecCCcC
Confidence 888888887765 33 568899998876665 46789999999999984 1111 11233333
Q ss_pred ---------------CccEEEccCCcCcccccccC-----CCCCCCCEEeccCCccccccc-ccccc---cccccEEEcc
Q 039137 326 ---------------NLTFIDLSNNSFFGEILSDW-----GRCPQLSLLDVSINNISGSIP-LEIGE---SLQLQYLDLS 381 (912)
Q Consensus 326 ---------------~L~~L~Ls~N~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~~-~~~~~---~~~L~~L~L~ 381 (912)
+|++|++++|.+.+.+|..+ ..++.|+.++++.|.+ .+| ..+.. ..+|++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~ 339 (562)
T 3a79_B 262 TWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSIS 339 (562)
T ss_dssp CHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEE
T ss_pred cHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEcc
Confidence 55556666665555555544 4444444444444444 222 11111 2458888888
Q ss_pred CccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccc--cccccccccccEEEeccccccc
Q 039137 382 SNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFV--PESLGSLVKLYYLNLSHNKLSQ 459 (912)
Q Consensus 382 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~ 459 (912)
+|.+.... ....+++|++|++++|++++..|..+..+++|++|+|++|+++++. |..|..+++|++|+|++|++++
T Consensus 340 ~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 417 (562)
T 3a79_B 340 DTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNS 417 (562)
T ss_dssp SSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBS
T ss_pred CCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCC
Confidence 88876322 1267899999999999999989999999999999999999999743 5678999999999999999998
Q ss_pred ccc-hhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCCC-Cc
Q 039137 460 QIP-IELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPN-ST 537 (912)
Q Consensus 460 ~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~-~~ 537 (912)
.+| ..+..+++|++|++++|++++..|..+. ++|+.|+|++|+|+.+ |..+..+++|++|++++|+++..++. -.
T Consensus 418 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~l~~~~~~ 494 (562)
T 3a79_B 418 HAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSI-PKDVTHLQALQELNVASNQLKSVPDGVFD 494 (562)
T ss_dssp CCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCC-CTTTTSSCCCSEEECCSSCCCCCCTTSTT
T ss_pred ccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCccc-ChhhcCCCCCCEEECCCCCCCCCCHHHHh
Confidence 455 4588999999999999999987776554 7999999999999965 55555999999999999999954333 22
Q ss_pred cCCCCchhhhccCCccc
Q 039137 538 TFRDAPLEALQGNKGLY 554 (912)
Q Consensus 538 ~~~~~~~~~l~~n~~~~ 554 (912)
.+.......+.+|+-.|
T Consensus 495 ~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 495 RLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp TCTTCCCEECCSCCBCC
T ss_pred cCCCCCEEEecCCCcCC
Confidence 33334444456665443
No 47
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.6e-42 Score=394.38 Aligned_cols=377 Identities=25% Similarity=0.295 Sum_probs=271.9
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCcEEecccccccccccccccccccc-------------ceeecccccccCCC
Q 039137 107 SFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHL-------------TVLHISRNWLSGSI 173 (912)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~L~~n~l~~~~ 173 (912)
+.++|++|++++|++ |.+|++|+++++|++|+|++|++.|.+|.+++.+++| ++|++++|.+++ +
T Consensus 9 ~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 457889999999999 7899999999999999999999999999999988875 999999999984 5
Q ss_pred CccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCcccccccccc
Q 039137 174 PHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLT 253 (912)
Q Consensus 174 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 253 (912)
|.. .++|++|++++|++++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| .+++++
T Consensus 87 p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 87 PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 553 3789999999999996 7754 3789999999999985 3332 2689999999999996 67 599999
Q ss_pred ccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEcc
Q 039137 254 NLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLS 333 (912)
Q Consensus 254 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 333 (912)
+|++|++++|++++ +|..+ ++|++|++++|++++ +| .+.++++|++|++++|.+++. |.. .++|++|+++
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~ 223 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAG 223 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECc
Confidence 99999999999986 55544 589999999999996 55 689999999999999999863 332 2589999999
Q ss_pred CCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCC
Q 039137 334 NNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCI 413 (912)
Q Consensus 334 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 413 (912)
+|.+. .+| .++.+++|+.|++++|++++ +|.. .++|++|++++|++++ +|.. .++|+.|++++|++++ +
T Consensus 224 ~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l 292 (454)
T 1jl5_A 224 NNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-L 292 (454)
T ss_dssp SSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-E
T ss_pred CCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-c
Confidence 99998 455 48899999999999999985 4432 4789999999999986 5543 3789999999999986 2
Q ss_pred ccccccccccccccccCcccCcccccccccc-ccccEEEecccccccccchhhhcccccceeeccccccCcccccccccc
Q 039137 414 PRELGSLINLEYLDLSANNLSNFVPESLGSL-VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM 492 (912)
Q Consensus 414 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 492 (912)
|.. .++|++|++++|+++++ + .+ ++|++|++++|++++ +|.. +++|++|++++|++++ +|. .+
T Consensus 293 ~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l 356 (454)
T 1jl5_A 293 SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LP 356 (454)
T ss_dssp SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CC
T ss_pred cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hh
Confidence 221 26899999999999873 2 23 589999999999986 5554 5789999999999985 454 47
Q ss_pred cccccccccCccccC--CCccccccc-------------ccceEEEccCCcccc--CCCC
Q 039137 493 ESLEKLNLSYNNLSG--LIPRCFEEM-------------HGLLHIDISYNKLEG--QIPN 535 (912)
Q Consensus 493 ~~L~~L~ls~N~l~~--~~p~~~~~l-------------~~L~~l~ls~N~l~~--~~~~ 535 (912)
++|+.|++++|++++ .+|..+..+ ++|+.|++++|++++ .+|.
T Consensus 357 ~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 357 QNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp TTCCEEECCSSCCSSCCCCCTTCCEEECCC------------------------------
T ss_pred hhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh
Confidence 899999999999999 678888888 889999999999998 5654
No 48
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=7.3e-42 Score=371.54 Aligned_cols=265 Identities=31% Similarity=0.445 Sum_probs=207.4
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
....++|++.+.||+|+||+||+|++ +++.||||++..... .....+++.+|++++++++||||+++++++...+..
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF--HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 33457899999999999999999987 688999999875432 233467789999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
++||||+++|+|.+++........+++.+++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 99999999999999996654445699999999999999999999999 8 999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
+.............||+.|+|||++.+..++.++||||||+++|||++|+.||....... ..............+.
T Consensus 187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~---~~~~~~~~~~~~~~~~- 262 (309)
T 3p86_A 187 RLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ---VVAAVGFKCKRLEIPR- 262 (309)
T ss_dssp ---------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH---HHHHHHHSCCCCCCCT-
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHhcCCCCCCCc-
Confidence 866544444456689999999999999999999999999999999999999986321110 0000111112222221
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..+..+.+++.+||+.||++|||++|+++.|++.+..
T Consensus 263 ---~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 263 ---NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 2345688999999999999999999999999987653
No 49
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.7e-41 Score=365.10 Aligned_cols=250 Identities=26% Similarity=0.425 Sum_probs=208.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|.+. +++.||+|++...... ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 94 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEE
Confidence 468999999999999999999864 7899999998644322 35678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++.. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 95 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (297)
T 3fxz_A 95 VMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT 167 (297)
T ss_dssp EEECCTTCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEECCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999999999999954 3588999999999999999999999 99999999999999999999999999998877
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
..........||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ............. ....
T Consensus 168 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~~~--~~~~ 241 (297)
T 3fxz_A 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA----LYLIATNGTPELQ--NPEK 241 (297)
T ss_dssp STTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHHCSCCCS--CGGG
T ss_pred CcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCC--Cccc
Confidence 665556667899999999999999999999999999999999999999852211100 0000011111111 1123
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 3456889999999999999999999875
No 50
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=4.4e-41 Score=369.10 Aligned_cols=278 Identities=31% Similarity=0.599 Sum_probs=225.4
Q ss_pred CcccHHHHHHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEE
Q 039137 626 GKIVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705 (912)
Q Consensus 626 ~~~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~ 705 (912)
..+...++....++|++.+.||+|+||.||+|+.++++.||||++....... ....+.+|+++++.++||||+++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG---GELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch---HHHHHHHHHHHHHhccCCCccceEE
Confidence 3567788999999999999999999999999998889999999987543322 2235889999999999999999999
Q ss_pred EEEcCCeeeEEEeecCCCChhhHhhccC-CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEE
Q 039137 706 FCSHPKHSFIIYEYLESGSLDKILCNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAH 784 (912)
Q Consensus 706 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 784 (912)
++..++..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||+++.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999996644 334599999999999999999999998666899999999999999999999
Q ss_pred EeccccccccCCCCCC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc---------
Q 039137 785 VSDFGIAKFLNPDSSN-WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS--------- 854 (912)
Q Consensus 785 l~Dfgla~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~--------- 854 (912)
|+|||+++........ .....||+.|+|||++.+..++.++||||+|+++|||++|+.||+.........
T Consensus 175 l~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 175 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp ECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred eccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999999876543332 334568999999999988889999999999999999999999996322111100
Q ss_pred ---ccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 039137 855 ---SNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEK 908 (912)
Q Consensus 855 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 908 (912)
........+.... .......+..+.+++.+||+.||.+|||++|+++.|++.
T Consensus 255 ~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQ--GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp TTSSCCSTTSSCTTCT--TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HhhchhhhhhcChhhc--cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 0011111111111 112355677899999999999999999999999999853
No 51
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.4e-41 Score=368.16 Aligned_cols=271 Identities=32% Similarity=0.503 Sum_probs=220.0
Q ss_pred HHHHHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 631 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
.++...+++|++.+.||+|+||+||+|++++++.||||++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS----QGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS----SHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh----HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 344456789999999999999999999988899999999865422 1467789999999999999999999999999
Q ss_pred CeeeEEEeecCCCChhhHhhccCC-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999999954432 23589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccc----------cc
Q 039137 790 IAKFLNPDS--SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS----------NM 857 (912)
Q Consensus 790 la~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~----------~~ 857 (912)
+++...... .......|++.|+|||++.+..++.++||||||+++|||++|+.||........... ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 998654322 122345689999999999988999999999999999999999999863221111000 00
Q ss_pred hhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 858 NIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.....+... ........+..+.+++.+||+.||++|||++|+++.|++.+.
T Consensus 265 ~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~ 315 (321)
T 2qkw_B 265 LEQIVDPNL--ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315 (321)
T ss_dssp CCSSSSSSC--TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcChhh--ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence 001111111 111234567789999999999999999999999999998764
No 52
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.5e-41 Score=383.43 Aligned_cols=393 Identities=23% Similarity=0.246 Sum_probs=282.0
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCC-------------cEEeccccccccccc
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNL-------------EYLDFSANKLFGQIP 150 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L-------------~~L~Ls~n~l~~~~p 150 (912)
.++..+++.++.+ |.++ .+++++++|++|++++|+++|.+|..++++++| ++|++++|++++ +|
T Consensus 11 ~~L~~L~l~~n~l-~~iP-~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMP-VEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred ccchhhhcccCch-hhCC-hhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 3566778888888 6664 469999999999999999999999999999875 999999999985 56
Q ss_pred cccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccc
Q 039137 151 SGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKS 230 (912)
Q Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 230 (912)
.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|.+++ +| .++++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 52 4799999999999996 7764 4889999999999984 4432 1689999999999996 77 6999999
Q ss_pred cceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEeccc
Q 039137 231 LFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQ 310 (912)
Q Consensus 231 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 310 (912)
|++|++++|++++ +|..+ ++|++|++++|++++ +| .++++++|++|++++|++++ +|... ++|++|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcC
Confidence 9999999999995 66543 589999999999997 55 69999999999999999996 45433 5899999999
Q ss_pred ccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCC
Q 039137 311 NYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIP 390 (912)
Q Consensus 311 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~ 390 (912)
|.++ .+| .++.+++|++|++++|++++. |. .+++|+.|++++|++.+ +|.. .++|++|++++|++++. |
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~ 293 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-S 293 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-S
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-c
Confidence 9999 455 489999999999999999863 33 35899999999999986 5543 37899999999999862 2
Q ss_pred ccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccc
Q 039137 391 TQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 470 (912)
Q Consensus 391 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 470 (912)
.. .++|+.|++++|++++ ++.. .++|++|++++|++++ +|.. +++|++|++++|++++ +|. .+++
T Consensus 294 ~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~ 358 (454)
T 1jl5_A 294 EL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE-VPE---LPQN 358 (454)
T ss_dssp CC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTT
T ss_pred Cc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc-ccc---hhhh
Confidence 21 2689999999999985 3321 2589999999999998 4544 5899999999999984 665 4789
Q ss_pred cceeeccccccCc--ccccccccc-------------cccccccccCccccC--CCcccccccccceEEEccCCccccCC
Q 039137 471 LSELDLSHNFLGE--KISSRICRM-------------ESLEKLNLSYNNLSG--LIPRCFEEMHGLLHIDISYNKLEGQI 533 (912)
Q Consensus 471 L~~L~Ls~N~l~~--~~~~~~~~l-------------~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~l~ls~N~l~~~~ 533 (912)
|++|++++|++++ .+|..+..+ ++|+.|++++|++++ .+|. .++.|.+.+|.+.+.+
T Consensus 359 L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~ 432 (454)
T 1jl5_A 359 LKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPE------SVEDLRMNSERVVDPY 432 (454)
T ss_dssp CCEEECCSSCCSSCCCCCTTCCEEECCC----------------------------------------------------
T ss_pred ccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchh------hHhheeCcCcccCCcc
Confidence 9999999999999 788888888 889999999999998 5564 4567788899888866
Q ss_pred C
Q 039137 534 P 534 (912)
Q Consensus 534 ~ 534 (912)
|
T Consensus 433 ~ 433 (454)
T 1jl5_A 433 E 433 (454)
T ss_dssp -
T ss_pred c
Confidence 5
No 53
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=365.28 Aligned_cols=258 Identities=26% Similarity=0.441 Sum_probs=210.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++... .....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 84 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF----DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF 84 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC----CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC----CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence 367899999999999999999876 6899999988532 23356789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 159 (310)
T 3s95_A 85 ITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159 (310)
T ss_dssp EEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence 99999999999999553 35689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCc--------------cccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 796 PDSSNW--------------SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 796 ~~~~~~--------------~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
...... ....||+.|+|||++.+..++.++||||||+++|||++|..||.................
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~ 239 (310)
T 3s95_A 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGF 239 (310)
T ss_dssp --------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHH
T ss_pred cccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcc
Confidence 432211 145789999999999999999999999999999999999999763322211111111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 862 LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
.....+ ...+..+.+++.+||+.||++|||++|+++.|++..
T Consensus 240 ~~~~~~------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 240 LDRYCP------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp HHHTCC------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccCC------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111 112245788999999999999999999999998754
No 54
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.1e-40 Score=369.22 Aligned_cols=255 Identities=19% Similarity=0.283 Sum_probs=212.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc--hHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM--SFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++........ ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999876 789999999876543221 11357789999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC----cEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY----EAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Dfg 789 (912)
++||||+++|+|.+++.. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 999999999999999943 45689999999999999999999999 999999999999998877 79999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
++...... .......||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+......++
T Consensus 165 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~~~~ 238 (361)
T 2yab_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITAVSYDFD 238 (361)
T ss_dssp SCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTCCCCC
T ss_pred CceEcCCC-CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCCCCC
Confidence 99876543 33455679999999999999899999999999999999999999985221 1112223333344444
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.++|.+||..||++|||+.|+++
T Consensus 239 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred chhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3333445667889999999999999999998874
No 55
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=6.6e-41 Score=366.52 Aligned_cols=249 Identities=23% Similarity=0.375 Sum_probs=208.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|++. +|+.||||++...... ....+.+.+|+++++.++||||+++++++...+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN--PTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 467999999999999999999974 8999999998654322 2356778899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... +.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 165 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFT 165 (328)
T ss_dssp EECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGS
T ss_pred EEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecC
Confidence 99999999999998443 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVT-EKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.. .......||+.|+|||++.+..+. .++||||+||++|||++|+.||+... .......+.......+..
T Consensus 166 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~p~~--- 236 (328)
T 3fe3_A 166 VG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVLRGKYRIPFY--- 236 (328)
T ss_dssp SS-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCTT---
T ss_pred CC-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCCC---
Confidence 43 334566899999999999888775 79999999999999999999986321 111222233333333321
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||.+|||++|+++
T Consensus 237 -~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 237 -MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp -SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred -CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3455789999999999999999999875
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.4e-39 Score=353.93 Aligned_cols=276 Identities=32% Similarity=0.515 Sum_probs=224.9
Q ss_pred CcccHHHHHHHhcCCCCC------ceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc
Q 039137 626 GKIVYEEIISATNDFNAE------HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN 699 (912)
Q Consensus 626 ~~~~~~e~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n 699 (912)
..+.+.++..+++.|... +.||+|+||.||+|+. +++.||+|++............+.+.+|+.+++.++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 356788899999888877 8999999999999987 688999999976543333335678999999999999999
Q ss_pred cccEEEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC
Q 039137 700 IVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL 779 (912)
Q Consensus 700 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~ 779 (912)
|+++++++...+..++||||+++++|.+++........+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999996655556799999999999999999999999 9999999999999999
Q ss_pred CCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc---
Q 039137 780 GYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS--- 854 (912)
Q Consensus 780 ~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~--- 854 (912)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||+.........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 234578999999998875 48899999999999999999999986332211000
Q ss_pred ------ccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 855 ------SNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 855 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
........+..... .....+..+.+++.+||+.||.+|||++++++.|++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSC---CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHhhhhhhhhhhhccccccc---cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 00111122222221 22455677899999999999999999999999998763
No 57
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6e-41 Score=361.99 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=208.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|++. +++.||+|++....... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 88 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL 88 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCC-HHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcccc-HHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence 467999999999999999999875 78999999986654333 3356789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++... +.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 v~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999999443 4689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC-Chhh
Q 039137 796 PDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP-SLHV 873 (912)
Q Consensus 796 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 873 (912)
.... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||+..... ...........+.. ....
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~ 237 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-----SIAIKHIQDSVPNVTTDVR 237 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-----HHHHHHHSSCCCCHHHHSC
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhhccCCCcchhcc
Confidence 4322 233457899999999999999999999999999999999999998632111 11111111111111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhh
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRP-TMKRVSQLLCEKIF 910 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~l~ 910 (912)
...+..+.+++.+||+.||++|| +++++.+.|++.+.
T Consensus 238 ~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 238 KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 22345688999999999999998 99999999987654
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-41 Score=368.78 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=199.4
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||+||+|++. +|+.||||++....... ..+.+.+|+++++.++||||+++++++...+..+
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~---~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~ 84 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS---DLPRIKTEIEALKNLRHQHICQLYHVLETANKIF 84 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch---HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEE
Confidence 3578999999999999999999875 89999999987654322 3456789999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||||+++|+|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||++++++.+||+|||++...
T Consensus 85 lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 85 MVLEYCPGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 99999999999999844 34689999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC-CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 795 NPDS-SNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 795 ~~~~-~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
.... .......||+.|+|||++.+..+ +.++||||+||++|+|++|..||+... .......+.......+..
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~p~~- 232 (347)
T 3zgw_A 159 KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKIMRGKYDVPKW- 232 (347)
T ss_dssp -------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCCCCTT-
T ss_pred cCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCCCCCC-
Confidence 4332 23445679999999999988775 889999999999999999999986321 111222233333333322
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 233 ---~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 233 ---LSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp ---CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 2345778999999999999999999875
No 59
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.7e-40 Score=361.36 Aligned_cols=261 Identities=26% Similarity=0.383 Sum_probs=213.0
Q ss_pred CcccHHHHHHHhcC----------CCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhh
Q 039137 626 GKIVYEEIISATND----------FNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE 694 (912)
Q Consensus 626 ~~~~~~e~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~ 694 (912)
+.+.++++..+.+. |+..+.||+|+||.||+|+.+ +|+.||||++...... ..+.+.+|+.+++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~----~~~~~~~E~~~l~~ 98 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ----RRELLFNEVVIMRD 98 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC----SHHHHHHHHHHHTT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh----HHHHHHHHHHHHHh
Confidence 34566777766654 667789999999999999986 7999999998754322 35678899999999
Q ss_pred cCCCccccEEEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCC
Q 039137 695 IRHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKN 774 (912)
Q Consensus 695 l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 774 (912)
++||||+++++++...+..++||||+++++|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+|
T Consensus 99 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~N 171 (321)
T 2c30_A 99 YQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDS 171 (321)
T ss_dssp CCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGG
T ss_pred CCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHH
Confidence 9999999999999999999999999999999999843 4589999999999999999999999 99999999999
Q ss_pred eEEcCCCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc
Q 039137 775 VLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 854 (912)
Q Consensus 775 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~ 854 (912)
|+++.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 172 Ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~---- 247 (321)
T 2c30_A 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV---- 247 (321)
T ss_dssp EEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----
T ss_pred EEECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 9999999999999999987765544455678999999999999999999999999999999999999998522111
Q ss_pred ccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 855 SNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...........+.. ......+..+.+++.+||+.||++|||++|+++
T Consensus 248 -~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 248 -QAMKRLRDSPPPKL-KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp -HHHHHHHHSSCCCC-TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHHHHhcCCCCCc-CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111111111 111233456889999999999999999999876
No 60
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-40 Score=379.60 Aligned_cols=357 Identities=21% Similarity=0.211 Sum_probs=297.9
Q ss_pred ccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccc
Q 039137 104 SFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVL 183 (912)
Q Consensus 104 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 183 (912)
+++++++|++|+|++|++++. | .++.+++|++|+|++|++++ +| ++.+++|++|++++|.+++. | ++.+++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 567789999999999999974 5 79999999999999999986 45 88999999999999999964 4 8899999
Q ss_pred cEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccc
Q 039137 184 NQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHN 263 (912)
Q Consensus 184 ~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N 263 (912)
++|++++|++++ +| ++++++|++|++++|.+++. + ++++++|++|++++|+..+.+ .++.+++|++|++++|
T Consensus 109 ~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n 180 (457)
T 3bz5_A 109 TYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFN 180 (457)
T ss_dssp CEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCC
Confidence 999999999986 44 88999999999999999874 3 888999999999999665555 4788999999999999
Q ss_pred cCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccc
Q 039137 264 ELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILS 343 (912)
Q Consensus 264 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 343 (912)
++++. | +..+++|+.|++++|++++. .+..+++|+.|++++|++++. | ++.+++|+.|++++|++++..
T Consensus 181 ~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~-- 249 (457)
T 3bz5_A 181 KITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELD-- 249 (457)
T ss_dssp CCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC--
T ss_pred cccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcC--
Confidence 99974 4 88889999999999999875 488889999999999999974 4 788899999999999998754
Q ss_pred cCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcccccccccc
Q 039137 344 DWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINL 423 (912)
Q Consensus 344 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 423 (912)
++.+++|+.|+++.|+ |+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. ...+|
T Consensus 250 -~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L 309 (457)
T 3bz5_A 250 -VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGI 309 (457)
T ss_dssp -CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCC
T ss_pred -HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcc
Confidence 4567888888887763 5677888888887776 56788899999999988777774 34566
Q ss_pred ccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCc
Q 039137 424 EYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYN 503 (912)
Q Consensus 424 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N 503 (912)
+.|++++| ++|++|+|++|++++. + +.++++|+.|++++|+|++ ++.|..|++++|
T Consensus 310 ~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n 365 (457)
T 3bz5_A 310 TELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNN 365 (457)
T ss_dssp SCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGT
T ss_pred eEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCC
Confidence 77766655 6889999999999874 3 8889999999999999976 367788899999
Q ss_pred cccCCCcccccccccceEEEccCCccccCCCCC
Q 039137 504 NLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS 536 (912)
Q Consensus 504 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~ 536 (912)
+++|. ..+..|..+++++|+++|.+|..
T Consensus 366 ~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 366 NFEAE-----GQTITMPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp SEEEE-----EEEEECCCBCCBTTBEEEECCTT
T ss_pred cEEec-----ceeeecCccccccCcEEEEcChh
Confidence 99886 24566778899999999988854
No 61
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=378.81 Aligned_cols=255 Identities=20% Similarity=0.313 Sum_probs=212.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||+||+|.+. +|+.||+|++..... .....+.+.+|+++++.++||||+++++++.+++..+
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 86 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHY 86 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEE
Confidence 4578999999999999999999875 789999999875432 2234567899999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc---CCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Dfgla 791 (912)
+||||+++|+|.+.+... ..+++.++..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 87 lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 87 LIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 999999999999988543 4689999999999999999999999 999999999999998 5678999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
..............||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+.......+..
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----QHRLYQQIKAGAYDFPSP 235 (444)
T ss_dssp BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCCCCTT
T ss_pred EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhCCCCCCcc
Confidence 877665555566789999999999999899999999999999999999999985211 111222233333333333
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 236 EWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 33445567889999999999999999999876
No 62
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-40 Score=363.03 Aligned_cols=251 Identities=22% Similarity=0.302 Sum_probs=211.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+++ +++.||+|.+... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 468999999999999999999876 6889999998633 1245678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC--CCcEEEeccccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL--GYEAHVSDFGIAKF 793 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~Dfgla~~ 793 (912)
||||+++|+|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.
T Consensus 79 v~e~~~g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~ 153 (321)
T 1tki_A 79 IFEFISGLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153 (321)
T ss_dssp EECCCCCCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEE
T ss_pred EEEeCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeE
Confidence 9999999999999943 234689999999999999999999999 9999999999999997 78999999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
.... .......||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+.......+....
T Consensus 154 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~ 227 (321)
T 1tki_A 154 LKPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEYTFDEEAF 227 (321)
T ss_dssp CCTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCCCCHHHH
T ss_pred CCCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHcCCCCCChhhh
Confidence 7543 33455678999999999998889999999999999999999999985221 11222333344444443333
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+..+.+++.+||+.||++|||+.|+++
T Consensus 228 ~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 228 KEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 445677899999999999999999999876
No 63
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.1e-40 Score=367.99 Aligned_cols=259 Identities=22% Similarity=0.376 Sum_probs=211.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC--------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP--------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFC 707 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 707 (912)
.++|++.+.||+|+||.||+|++. ++..||||++.... .....+.+.+|+++++.+ +||||+++++++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 156 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence 467999999999999999999752 45679999987542 233567899999999999 899999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccCC-------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCC
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKN 774 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 774 (912)
...+..|+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+||||||+|
T Consensus 157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~N 233 (370)
T 2psq_A 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 233 (370)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGG
T ss_pred ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchhh
Confidence 999999999999999999999965432 24589999999999999999999999 99999999999
Q ss_pred eEEcCCCcEEEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccc
Q 039137 775 VLLDLGYEAHVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMS 851 (912)
Q Consensus 775 ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~ 851 (912)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 234 Ill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-- 311 (370)
T 2psq_A 234 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 311 (370)
T ss_dssp EEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--
T ss_pred EEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH--
Confidence 9999999999999999987654332 2233456889999999999999999999999999999999 9999863211
Q ss_pred cccccchhhhccCC-CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 852 SSSSNMNIEMLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 852 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
........... ...+ ...+..+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 312 ---~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 312 ---EELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ---GGHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111111111 1111 1234568899999999999999999999999998763
No 64
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1e-40 Score=365.95 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=208.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++...... .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~l 82 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF 82 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEE
Confidence 367999999999999999999876 7999999998643110 11135678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 v~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 83 VMEYANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 9999999999999844 34689999999999999999999999 99999999999999999999999999998655
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+......++. .
T Consensus 157 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~p~----~ 227 (337)
T 1o6l_A 157 SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEEIRFPR----T 227 (337)
T ss_dssp CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCT----T
T ss_pred cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCC----C
Confidence 44455566789999999999999999999999999999999999999985211 11112222233333332 2
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRP-----TMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 903 (912)
.+..+.++|.+||+.||++|| +++|+++
T Consensus 228 ~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 345688999999999999999 8888764
No 65
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=5.3e-41 Score=374.82 Aligned_cols=263 Identities=22% Similarity=0.319 Sum_probs=210.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||+||+|+.+ +++.||+|++........ ...+.+.+|..++.++ +||||+++++++.+++..+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~-~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDD-EDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCH-HHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 468999999999999999999976 688999999875433221 1335577899999887 8999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||||+++|+|.+++.+ .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 130 lV~E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 99999999999999854 34689999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc----ccccchhhhccCCCCCCC
Q 039137 795 NPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----SSSNMNIEMLDSRLPYPS 870 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~ 870 (912)
..........+||+.|+|||++.+..++.++||||+||++|||++|+.||+....... ................+.
T Consensus 204 ~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~ 283 (396)
T 4dc2_A 204 LRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR 283 (396)
T ss_dssp CCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT
T ss_pred ccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC
Confidence 4444556677899999999999999999999999999999999999999963211111 011122223334444443
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHH---HHHHHHHHhhh
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMK---RVSQLLCEKIF 910 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~---evl~~L~~~l~ 910 (912)
. .+..+.++|.+||+.||++||++. .+.+.++..+|
T Consensus 284 ~----~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff 322 (396)
T 4dc2_A 284 S----LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322 (396)
T ss_dssp T----SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred c----CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence 2 345678999999999999999962 44555555444
No 66
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.6e-40 Score=367.19 Aligned_cols=254 Identities=21% Similarity=0.343 Sum_probs=211.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||.||+|.++ +++.||+|++...... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 104 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY 104 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEE
Confidence 3567999999999999999999876 7899999999754332 224577899999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC---cEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY---EAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~Dfgla 791 (912)
+||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 105 lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a 178 (362)
T 2bdw_A 105 LVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA 178 (362)
T ss_dssp EEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcc
Confidence 99999999999998843 35689999999999999999999999 999999999999998654 5999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+......++..
T Consensus 179 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~~~~~~ 252 (362)
T 2bdw_A 179 IEVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----QHRLYAQIKAGAYDYPSP 252 (362)
T ss_dssp BCCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCCCCTT
T ss_pred eEecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCCCCcc
Confidence 876533 33445689999999999999899999999999999999999999985211 111222233333334433
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.++|.+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 253 EWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 33445667889999999999999999999875
No 67
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=7e-40 Score=358.29 Aligned_cols=265 Identities=22% Similarity=0.333 Sum_probs=213.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC--ee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK--HS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~ 713 (912)
.++|++.+.||+|+||+||+|++. +++.||||++...... ...+.+.+|+++++.++||||+++++++...+ ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 84 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG---SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc---chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceE
Confidence 367999999999999999999876 5899999998643221 13567789999999999999999999998765 77
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE----cCCCcEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL----DLGYEAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~Dfg 789 (912)
++||||+++++|.+++........+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp EEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999999997655555599999999999999999999999 99999999999999 778889999999
Q ss_pred cccccCCCCCCccccccccccccccccc--------cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAY--------TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
+++...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||.......... ......
T Consensus 162 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~ 239 (319)
T 4euu_A 162 AARELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNK-EVMYKI 239 (319)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCH-HHHHHH
T ss_pred CceecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhH-HHHHHH
Confidence 998765443 334567999999999886 5678999999999999999999999986322111100 000000
Q ss_pred ---------------------ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 862 ---------------------LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 862 ---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
+....+............+.+++.+||+.||++|||++|+++...+..
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 111222222334566777899999999999999999999999887653
No 68
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=360.89 Aligned_cols=255 Identities=19% Similarity=0.311 Sum_probs=209.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc--hHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM--SFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
.++|++.+.||+|+||.||+|+++ +++.||+|++........ ....+.+.+|+.+++.++||||+++++++..++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356999999999999999999876 689999999875433221 11357789999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC----cEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY----EAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Dfg 789 (912)
++||||+++|+|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 999999999999999943 35689999999999999999999999 999999999999999887 79999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
+++..... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ..............+
T Consensus 164 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~~~ 237 (326)
T 2y0a_A 164 LAHKIDFG-NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANVSAVNYEFE 237 (326)
T ss_dssp TCEECCTT-SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHHTCCCCC
T ss_pred CCeECCCC-CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHHhcCCCcC
Confidence 99876543 233456799999999999988999999999999999999999999852211 111112222233333
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 3233344567889999999999999999999876
No 69
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=364.22 Aligned_cols=257 Identities=26% Similarity=0.450 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||+||+|++. .+..||||++.... .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 467889999999999999999875 34469999997542 23356789999999999999999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999543 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCC
Q 039137 793 FLNPDSSNW---SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLP 867 (912)
Q Consensus 793 ~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 867 (912)
......... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... ..+
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 274 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN-----RDVISSVEEGYRLP 274 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH-----HHHHHHHHTTCCCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHcCCCCC
Confidence 765433221 23345778999999998899999999999999999999 9999852211 1111111111 122
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.+ ...+..+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 275 ~~----~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 275 AP----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp CC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC----CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 22 1234568899999999999999999999999998764
No 70
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.5e-40 Score=368.18 Aligned_cols=258 Identities=20% Similarity=0.260 Sum_probs=210.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCC-CCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLP-GEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||+||+|+++ +++.||||++..... .......+.+.+|+.+++.++||||+++++++...+..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 457999999999999999999876 789999999853210 011113567899999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccC-CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc---EEEecccc
Q 039137 715 IIYEYLESGSLDKILCNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVSDFGI 790 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~Dfgl 790 (912)
+||||+++++|.+++.... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999988875432 334589999999999999999999999 9999999999999986654 99999999
Q ss_pred ccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCC
Q 039137 791 AKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPS 870 (912)
Q Consensus 791 a~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (912)
+..............||+.|+|||++.+..++.++||||+||++|+|++|+.||.... ..............+.
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~------~~~~~~i~~~~~~~~~ 253 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK------ERLFEGIIKGKYKMNP 253 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH------HHHHHHHHHTCCCCCH
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH------HHHHHHHHcCCCCCCc
Confidence 9887655444556789999999999999999999999999999999999999986321 1122223333333333
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 333344567889999999999999999999875
No 71
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.6e-39 Score=372.94 Aligned_cols=346 Identities=30% Similarity=0.391 Sum_probs=207.7
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEE
Q 039137 107 SFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQL 186 (912)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 186 (912)
.+++++.|+++++++.. +| .+..+++|++|||++|.+++. |. ++.+++|++|++++|.+++..| ++++++|++|
T Consensus 44 ~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 34567778888887764 44 377788888888888887744 33 7778888888888888775443 7777788888
Q ss_pred EccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCc
Q 039137 187 ALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS 266 (912)
Q Consensus 187 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 266 (912)
++++|.+++..+ +.++++|++|++++|.+.+ ++ .++++++|+.|+++ |.+.+..+ +.++++|++|++++|.++
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS 190 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC
Confidence 888777774432 7777777777777777764 33 36677777777775 44443322 666777777777777766
Q ss_pred ccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCC
Q 039137 267 GIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWG 346 (912)
Q Consensus 267 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 346 (912)
+. ..+..+++|++|++++|.+.+..| +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+.+..+ +.
T Consensus 191 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~ 262 (466)
T 1o6v_A 191 DI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LS 262 (466)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GT
T ss_pred CC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hh
Confidence 43 235666666666666666665443 55566666666666666543 245555666666666666554433 55
Q ss_pred CCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccc
Q 039137 347 RCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYL 426 (912)
Q Consensus 347 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 426 (912)
.+++|+.|++++|++.+..+ +..+++|++|+|++|++.+..+ +..+++|+.|++++|++++..| +..+++|++|
T Consensus 263 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L 336 (466)
T 1o6v_A 263 GLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL 336 (466)
T ss_dssp TCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEe
Confidence 55555555555555554333 4455555555555555554322 4455555555555555554433 4445555555
Q ss_pred cccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCc
Q 039137 427 DLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483 (912)
Q Consensus 427 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 483 (912)
++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 337 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 337 FFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred ECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 5555555443 234455555555555555544443 4445555555555555544
No 72
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.9e-39 Score=373.97 Aligned_cols=347 Identities=29% Similarity=0.393 Sum_probs=235.0
Q ss_pred cCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCcccee
Q 039137 130 SNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVI 209 (912)
Q Consensus 130 ~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~ 209 (912)
..+++|++|+++++.+. .+|. +..+++|++|+|++|.+++. |. ++++++|++|++++|.+++..| ++++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 45678899999999887 4664 88899999999999999854 44 8889999999999999886544 888889999
Q ss_pred eeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCcc
Q 039137 210 LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHF 289 (912)
Q Consensus 210 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 289 (912)
|++++|.+++..+ +.++++|++|++++|++++ ++ .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+
T Consensus 117 L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l 189 (466)
T 1o6v_A 117 LTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKV 189 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCC
T ss_pred EECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcC
Confidence 9999988886543 7888888888888888875 33 47888888888886 5555433 277788888888888887
Q ss_pred CCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccc
Q 039137 290 RGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEI 369 (912)
Q Consensus 290 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 369 (912)
++. ..+..+++|++|++++|.+++..+ ++.+++|++|++++|++.+. ..+..+++|+.|++++|++.+..+ +
T Consensus 190 ~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~ 261 (466)
T 1o6v_A 190 SDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--L 261 (466)
T ss_dssp CCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G
T ss_pred CCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--h
Confidence 753 346777777777777777776544 56677777777777777543 345566666666666666665443 5
Q ss_pred cccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccE
Q 039137 370 GESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYY 449 (912)
Q Consensus 370 ~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 449 (912)
..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.
T Consensus 262 ~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~ 335 (466)
T 1o6v_A 262 SGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 335 (466)
T ss_dssp TTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCE
T ss_pred hcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCE
Confidence 556666666666666664332 5555666666666666654333 4555566666666666555443 455555566
Q ss_pred EEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccC
Q 039137 450 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSG 507 (912)
Q Consensus 450 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 507 (912)
|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 336 L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 336 LFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred eECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 66665555543 245555555555555555555444 4555555555555555554
No 73
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=2.1e-40 Score=365.15 Aligned_cols=262 Identities=22% Similarity=0.330 Sum_probs=210.5
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeeeE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 715 (912)
++|++.+.||+|+||.||+|+++ +++.||+|++....... ....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVND-DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCS-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcc-hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 57999999999999999999976 68899999997654332 22456788999999988 89999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 v~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~ 161 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161 (345)
T ss_dssp EECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSC
T ss_pred EEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecccccccc
Confidence 9999999999999954 34689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc----ccccchhhhccCCCCCCCh
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----SSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 871 (912)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||+....... ................+.
T Consensus 162 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~- 240 (345)
T 3a8x_A 162 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR- 240 (345)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT-
T ss_pred CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC-
Confidence 444455667899999999999999999999999999999999999999863211110 011111222333333332
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHH---HHHHHHHHhhh
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMK---RVSQLLCEKIF 910 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~---evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++||++. .+.+.++..+|
T Consensus 241 ---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 241 ---SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp ---TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred ---CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 2345688999999999999999962 33444444443
No 74
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=9.6e-41 Score=368.66 Aligned_cols=247 Identities=23% Similarity=0.366 Sum_probs=200.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||+||+|+++ +++.||+|++...... .....+.+.+|..+++.+ +||||+++++++.+++..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~-~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVIL-QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhc-chhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 3578999999999999999999876 6899999998643111 111346678999999988 699999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
|+||||+++|+|.+++... +.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceee
Confidence 9999999999999999543 4689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
...........+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+......++..
T Consensus 174 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~~p~~-- 246 (353)
T 3txo_A 174 GICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILNDEVVYPTW-- 246 (353)
T ss_dssp SCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCTT--
T ss_pred cccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCCCCCC--
Confidence 5544445566789999999999999899999999999999999999999986221 122233334444444432
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTM 898 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~ 898 (912)
.+..+.+++.+||+.||++||++
T Consensus 247 --~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 247 --LHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSTTS
T ss_pred --CCHHHHHHHHHHhhhCHHHccCC
Confidence 33457889999999999999998
No 75
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-40 Score=352.36 Aligned_cols=256 Identities=24% Similarity=0.411 Sum_probs=210.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||+||+|++.+++.||+|++..... ..+++.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 83 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEE
Confidence 367899999999999999999998899999999975432 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 9999999999999543 34689999999999999999999999 999999999999999999999999999986543
Q ss_pred CC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 797 DS-SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 797 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.. .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ...............+ .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~---~ 230 (269)
T 4hcu_A 159 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYKP---R 230 (269)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTTCCCCCC---T
T ss_pred cccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHHHhcCccCCCC---C
Confidence 21 11233456788999999998999999999999999999999 9999863211 1111111111111111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 231 ~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 231 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 124558899999999999999999999999998764
No 76
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=358.78 Aligned_cols=251 Identities=21% Similarity=0.412 Sum_probs=205.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK---- 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 711 (912)
.++|++.+.||+|+||.||+|+++ +++.||||++..... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST---TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 467999999999999999999987 899999999975432 225678999999999999999999999986543
Q ss_pred -----------------------------------------------------eeeEEEeecCCCChhhHhhccCCcccC
Q 039137 712 -----------------------------------------------------HSFIIYEYLESGSLDKILCNDASAKEL 738 (912)
Q Consensus 712 -----------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~l 738 (912)
..++||||+++|+|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 379999999999999999777666677
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCCCCC------------Ccccccc
Q 039137 739 GWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSS------------NWSELAG 806 (912)
Q Consensus 739 ~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~------------~~~~~~g 806 (912)
++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999987765421 2234579
Q ss_pred ccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHH
Q 039137 807 THGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFS 886 (912)
Q Consensus 807 ~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 886 (912)
|+.|+|||++.+..++.++||||+|+++|||++|..|+..... ........ .. +.........+.+++.+
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~-------~~~~~~~~--~~-~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR-------IITDVRNL--KF-PLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH-------HHHHHHTT--CC-CHHHHHHCHHHHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH-------HHHHhhcc--CC-CcccccCChhHHHHHHH
Confidence 9999999999999999999999999999999999888531111 11111111 11 22334455677899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 039137 887 CLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 887 cl~~dP~~RPt~~evl~ 903 (912)
||+.||++|||++|+++
T Consensus 309 ~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHCSSGGGSCCHHHHHH
T ss_pred HccCCCCcCCCHHHHhh
Confidence 99999999999998875
No 77
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=9.4e-40 Score=355.54 Aligned_cols=257 Identities=21% Similarity=0.294 Sum_probs=201.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||+||+|++++++.||+|++...... ....+.+.+|+++++.++||||+++++++.+++..++|
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAED--EGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccccc--chhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 4789999999999999999999988999999998754322 22456788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++ ++.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 98 FEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999985 787777442 34589999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc-------------
Q 039137 797 DSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML------------- 862 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~------------- 862 (912)
.........+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||.......... ......
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~ 249 (311)
T 3niz_A 172 PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLP--KIFSILGTPNPREWPQVQE 249 (311)
T ss_dssp CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHH--HHHHHHCCCCTTTSGGGTT
T ss_pred CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHHHHCCCChHHhhhhhc
Confidence 5555566688999999999876 568999999999999999999999986322111000 000000
Q ss_pred -----cCCCC---CCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 -----DSRLP---YPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 -----~~~~~---~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..... ... ......+.++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp SHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000 000 001112356789999999999999999999875
No 78
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.3e-39 Score=353.21 Aligned_cols=257 Identities=28% Similarity=0.436 Sum_probs=200.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhh--cCCCccccEEEEEEcC----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE--IRHRNIVKFYGFCSHP---- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~~---- 710 (912)
.++|++.+.||+|+||+||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCC
Confidence 46899999999999999999988 7899999998532 34556667777766 7899999999997543
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeeecCCCCCCeEEcCCCc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH--------NNCFPPIVHRDISSKNVLLDLGYE 782 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~ 782 (912)
...++||||+++|+|.+++.. ..+++.++++++.|++.||+||| ++ +|+||||||+||+++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCC
Confidence 458999999999999999932 46899999999999999999999 77 9999999999999999999
Q ss_pred EEEeccccccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CC
Q 039137 783 AHVSDFGIAKFLNPDSSN----WSELAGTHGYVAPELAYTL------KVTEKCDVYSFGVLALEVIKG----------KH 842 (912)
Q Consensus 783 ~kl~Dfgla~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg----------~~ 842 (912)
+||+|||+++........ .....||+.|+|||++.+. .++.++||||||+++|||++| +.
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~ 231 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccc
Confidence 999999999866543322 2334789999999998876 455799999999999999999 77
Q ss_pred Cccchhccccccccchhh-hccC-CCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 039137 843 PRDFLFEMSSSSSNMNIE-MLDS-RLPYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEK 908 (912)
Q Consensus 843 pf~~~~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 908 (912)
||................ .... ....+. ......+..+.+++.+||+.||++|||++|+++.|++.
T Consensus 232 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 232 PFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 764222111111111111 1111 111111 12334667899999999999999999999999999874
No 79
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.3e-40 Score=349.80 Aligned_cols=256 Identities=27% Similarity=0.439 Sum_probs=209.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||.||+|+++++..||+|++..... ..+++.+|+++++.++||||+++++++..++..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEE
Confidence 467999999999999999999998888999999865432 346788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 156 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD 156 (268)
T ss_dssp EECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCT
T ss_pred EEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecch
Confidence 9999999999999543 34589999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCC-ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 797 DSSN-WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 797 ~~~~-~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+..... ..............+ .
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~---~ 228 (268)
T 3sxs_A 157 DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVSQGHRLYRP---H 228 (268)
T ss_dssp TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCC---T
T ss_pred hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHHcCCCCCCC---C
Confidence 3221 223445678999999998889999999999999999999 99998632111 111111111111111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++|||++|+++.|+....
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 229 LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 123458899999999999999999999999987654
No 80
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.3e-40 Score=358.52 Aligned_cols=252 Identities=23% Similarity=0.301 Sum_probs=195.1
Q ss_pred hcCCCCCceeeecCceEEEEEEe----CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||.||+|+. .+++.||+|++..............+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 47899999999765432222245667899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 9999999999999999954 34688999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
.............||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+.......+.
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~p~-- 242 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTIDKILKCKLNLPP-- 242 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHTCCCCCT--
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhCCCCCCC--
Confidence 654444444566799999999999998999999999999999999999999863211 1112222233333332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRP-----TMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 903 (912)
..+..+.+++.+||+.||++|| ++.|+++
T Consensus 243 --~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 243 --YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 2345678999999999999999 5666543
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.3e-39 Score=351.66 Aligned_cols=259 Identities=25% Similarity=0.377 Sum_probs=201.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||+||+|++. ..+|+|+++.... .....+.+.+|+++++.++||||+++++++. .+..++|
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 468999999999999999999864 4689998875432 2335678999999999999999999999875 4568999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~ 184 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred EecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence 9999999999999533 45689999999999999999999999 999999999999999999999999999986542
Q ss_pred C--CCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC-CCCCCC
Q 039137 797 D--SSNWSELAGTHGYVAPELAY---TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPS 870 (912)
Q Consensus 797 ~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 870 (912)
. ........||+.|+|||++. +..++.++||||||+++|||++|+.||....... ......... ..+...
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~~~~~~~~~~~~ 260 (307)
T 3lb7_A 185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFMVGRGYASPDLS 260 (307)
T ss_dssp ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHHHTCCCCCST
T ss_pred ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH----HHHHHHhcCCCCcchh
Confidence 2 22234567999999999886 5668899999999999999999999986321110 000000011 111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
......+..+.+++.+||+.||++||++.|+++.|+...
T Consensus 261 ~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 261 KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 111223456889999999999999999999999998754
No 82
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-40 Score=362.21 Aligned_cols=248 Identities=23% Similarity=0.338 Sum_probs=201.2
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|.+.+.||+|+||+||+|++. +++.||+|++....... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKK-SDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHH-TTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccc-hhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 67999999999999999999974 78999999985321110 01235688999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+ +|+|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 88 ~E~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp ECCC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EECC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999 6788888844 34689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
. .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+..... .............+. .
T Consensus 161 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~~~~~i~~~~~~~p~----~ 230 (336)
T 3h4j_B 161 G-NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----NLFKKVNSCVYVMPD----F 230 (336)
T ss_dssp S-BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----TCBCCCCSSCCCCCT----T
T ss_pred C-cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHcCCCCCcc----c
Confidence 3 23345679999999999988776 78999999999999999999998632111 111111111222221 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||.+|||++|+++
T Consensus 231 ~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 231 LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 3456789999999999999999999875
No 83
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.8e-40 Score=364.94 Aligned_cols=257 Identities=25% Similarity=0.456 Sum_probs=198.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||.||+|+++ ++..||||++.... .....+.+.+|+.++++++||||+++++++...+.
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 120 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence 357999999999999999999865 57789999987542 23356789999999999999999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 195 (373)
T 2qol_A 121 VMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGR 195 (373)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccc
Confidence 99999999999999999543 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCC
Q 039137 793 FLNPDSSNW---SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLP 867 (912)
Q Consensus 793 ~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 867 (912)
......... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... +.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~~~i~~~~~~~ 270 (373)
T 2qol_A 196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLP 270 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHHHHHHTTEECC
T ss_pred ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCC
Confidence 765432211 22335678999999999999999999999999999998 9999852211 1111111111 112
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.+ ...+..+.+++.+||+.||++||+++|+++.|++.+.
T Consensus 271 ~~----~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 271 PP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp CC----TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CC----ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 11 1234568899999999999999999999999998764
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.8e-40 Score=352.82 Aligned_cols=258 Identities=24% Similarity=0.353 Sum_probs=198.4
Q ss_pred cCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIY 717 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 717 (912)
++|++.+.||+|+||+||+|+..+++.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG--GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc--cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 578999999999999999999988999999998654322 113467889999999999999999999999999999999
Q ss_pred eecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCCC
Q 039137 718 EYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPD 797 (912)
Q Consensus 718 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 797 (912)
||+++ +|.+++... .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153 (288)
T ss_dssp ECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred EecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence 99986 898888442 35689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhcccccc----------ccc-----hhhh
Q 039137 798 SSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS----------SNM-----NIEM 861 (912)
Q Consensus 798 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~----------~~~-----~~~~ 861 (912)
........+|+.|+|||++.+. .++.++||||+||++|||++|+.||.......... ... ....
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc
Confidence 4444556789999999998764 58999999999999999999999986321110000 000 0000
Q ss_pred ccCCCC----CC-ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 862 LDSRLP----YP-SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 862 ~~~~~~----~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+.... .+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 00 0001123456789999999999999999998865
No 85
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=9.7e-40 Score=357.19 Aligned_cols=252 Identities=25% Similarity=0.353 Sum_probs=202.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 82 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD---CPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc---hHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 468999999999999999999876 78999999986543221 34668899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 83 v~e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 156 (323)
T 3tki_A 83 FLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (323)
T ss_dssp EEECCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEcCCCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceec
Confidence 999999999999983 334689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 796 PDS--SNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 796 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
... .......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||+..... ..............+ .
T Consensus 157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~--~ 230 (323)
T 3tki_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----CQEYSDWKEKKTYLN--P 230 (323)
T ss_dssp ETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTT----SHHHHHHHTTCTTST--T
T ss_pred cCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchH----HHHHHHHhcccccCC--c
Confidence 322 22345679999999999987775 77899999999999999999998632111 011111111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 1234456789999999999999999998865
No 86
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.5e-39 Score=351.03 Aligned_cols=258 Identities=22% Similarity=0.292 Sum_probs=201.5
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||+||+|+++ +++.||+|++....... ...+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 79 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE--GVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSST--THHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcC--CcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEE
Confidence 57999999999999999999876 68999999997654322 2457788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++ ++.+.+.. ..+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 80 ~e~~~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 153 (292)
T 3o0g_A 80 FEFCDQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGI 153 (292)
T ss_dssp EECCSE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred EecCCC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence 999986 55555533 235689999999999999999999999 999999999999999999999999999988765
Q ss_pred CCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCccchhcccccc-----------ccch--hhhc
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS-----------SNMN--IEML 862 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~-----------~~~~--~~~~ 862 (912)
.........||+.|+|||++.+.. ++.++||||+||++|||++|..||.......... .... ....
T Consensus 154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 154 PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 555556678899999999988766 7999999999999999999888852110000000 0000 0000
Q ss_pred cCCCCC--------CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRLPY--------PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~~~--------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+. ........+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000000 00011123456789999999999999999998875
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=353.29 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=199.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc----------------------hHHHHHHHHHHHHHh
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM----------------------SFQQEEFLNEIQALT 693 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----------------------~~~~~~~~~Ei~~l~ 693 (912)
.++|++.+.||+|+||.||+|++. +++.||||++........ ....+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 468999999999999999999875 788999999865432110 112356889999999
Q ss_pred hcCCCccccEEEEEEc--CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCC
Q 039137 694 EIRHRNIVKFYGFCSH--PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDIS 771 (912)
Q Consensus 694 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 771 (912)
.++||||+++++++.+ .+..++||||+++++|.++. ....+++.+++.++.|++.||+|||++ +|+|||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP----TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS----CSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 9999999999999987 56889999999999998875 234689999999999999999999999 99999999
Q ss_pred CCCeEEcCCCcEEEeccccccccCCCCCCccccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCccchh
Q 039137 772 SKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK---VTEKCDVYSFGVLALEVIKGKHPRDFLF 848 (912)
Q Consensus 772 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltg~~pf~~~~ 848 (912)
|+||+++.++.+||+|||+++.............||+.|+|||++.+.. ++.++||||||+++|||++|+.||....
T Consensus 165 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HHHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999999987765544445668999999999988765 3778999999999999999999985221
Q ss_pred ccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 849 EMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
. ..............+. ....+..+.+++.+||+.||++|||++|+++
T Consensus 245 ~-----~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 I-----MCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H-----HHHHHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H-----HHHHHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 0111111112222211 1123456889999999999999999999864
No 88
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6.6e-40 Score=349.63 Aligned_cols=255 Identities=26% Similarity=0.450 Sum_probs=194.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||.||+|++ .++.||||++............+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 35789999999999999999998 48899999987654443333457789999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC--------CCcEEEecc
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL--------GYEAHVSDF 788 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--------~~~~kl~Df 788 (912)
|||+++++|.+++. ...+++.+++.++.|++.|++|||++...+|+||||||+||+++. ++.+||+||
T Consensus 85 ~e~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 85 MEFARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp EECCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EEcCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 99999999999983 346899999999999999999999992112999999999999986 678999999
Q ss_pred ccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCC--C
Q 039137 789 GIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSR--L 866 (912)
Q Consensus 789 gla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~--~ 866 (912)
|++....... .....|++.|+|||.+.+..++.++||||+|+++|+|++|+.||...... .......... .
T Consensus 161 g~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 233 (271)
T 3dtc_A 161 GLAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-----AVAYGVAMNKLAL 233 (271)
T ss_dssp CC---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHTSCCCC
T ss_pred Cccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHhhhcCCCCC
Confidence 9998664332 23457899999999999999999999999999999999999998632111 1111111111 1
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 907 (912)
+.+ ...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 234 ~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 234 PIP----STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCC----cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 111 1234568899999999999999999999999975
No 89
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.1e-40 Score=361.12 Aligned_cols=260 Identities=17% Similarity=0.200 Sum_probs=208.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||+||+|+.. +++.||||++..... .+.+.+|+++++.+ +||||+++++++...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 81 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNA 81 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccE
Confidence 367999999999999999999864 789999999865422 23477899999999 8999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc-----EEEeccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE-----AHVSDFG 789 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~Dfg 789 (912)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 82 MVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred EEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 999999 89999999543 35799999999999999999999999 9999999999999998887 9999999
Q ss_pred cccccCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 790 IAKFLNPDSSN-------WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 790 la~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
+++........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .........
T Consensus 156 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~ 233 (330)
T 2izr_A 156 LAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIG 233 (330)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHH
T ss_pred cceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHH
Confidence 99876543321 245679999999999999999999999999999999999999986321110 000011111
Q ss_pred cCCCCCCChhh-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 863 DSRLPYPSLHV-QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 863 ~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
....+.+.... ...+ .+.+++..||+.||.+||+++++.+.|++.+.+
T Consensus 234 ~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 234 DTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp HHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 11111111111 1122 788999999999999999999999999977643
No 90
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.8e-40 Score=363.41 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=205.8
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCe
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~ 712 (912)
...++|++.+.||+|+||.||+|+++ +++.||+|++....... ....+.+..|..++..+ +||||+++++++.+.+.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLM-DDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhh-hhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 45678999999999999999999986 68999999986431100 11345677899999887 89999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.|+||||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 166 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166 (345)
T ss_dssp EEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhh
Confidence 9999999999999999954 34689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+......++.
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~p~-- 239 (345)
T 1xjd_A 167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFHSIRMDNPFYPR-- 239 (345)
T ss_dssp CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCCCT--
T ss_pred hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHhCCCCCCc--
Confidence 654444455667899999999999999999999999999999999999999852211 1111222222333332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMK-RVS 902 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~-evl 902 (912)
..+..+.+++.+||+.||++||++. |++
T Consensus 240 --~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 240 --WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp --TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred --ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1345678999999999999999987 543
No 91
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.7e-39 Score=348.78 Aligned_cols=257 Identities=25% Similarity=0.417 Sum_probs=208.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||+||+|++.++..||+|++..... ..+++.+|+++++.++||||+++++++.+.+..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 97 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEE
Confidence 467999999999999999999998888999999975432 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 98 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 98 TEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp ECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 9999999999999542 34689999999999999999999999 999999999999999999999999999986643
Q ss_pred CC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 797 DS-SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 797 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.. .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ..............+ .
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~---~ 244 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQGLRLYRP---H 244 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHTTCCCCCC---T
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhcccCCCCC---C
Confidence 21 11223456788999999998899999999999999999998 99998632111 111111111111111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..+..+.+++.+||+.||++|||++|+++.|++.+.+
T Consensus 245 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 245 LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 1234688999999999999999999999999988754
No 92
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.6e-40 Score=358.85 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=186.0
Q ss_pred CceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCCeeeEEEeec
Q 039137 643 EHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPKHSFIIYEYL 720 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 720 (912)
.+.||+|+||+||+|.++ +++.||||++... ....+.+|+.+++.++ ||||+++++++.+++..++||||+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~ 88 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELL 88 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEcc
Confidence 478999999999999876 6899999998532 3566789999999997 999999999999999999999999
Q ss_pred CCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC---cEEEeccccccccCCC
Q 039137 721 ESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY---EAHVSDFGIAKFLNPD 797 (912)
Q Consensus 721 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~Dfgla~~~~~~ 797 (912)
++|+|.+++... +.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.....
T Consensus 89 ~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 162 (325)
T 3kn6_A 89 NGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162 (325)
T ss_dssp CSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCC
Confidence 999999999543 5689999999999999999999999 999999999999998766 7999999999877665
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc--ccccchhhhccCCCCCCChhhHH
Q 039137 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS--SSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 798 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
........||+.|+|||++.+..++.++||||+|+++|+|++|+.||........ ................+......
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 163 NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKN 242 (325)
T ss_dssp ---------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccC
Confidence 5555667789999999999999999999999999999999999999863222110 11112223334444555545555
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVS 902 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl 902 (912)
.+..+.+++.+||+.||++|||++|++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 677899999999999999999999876
No 93
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.6e-40 Score=367.94 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=209.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+++ +++.||||++.... .....+++.+|+++++.++||||+++++++...+..++
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 467899999999999999999986 78999999987432 22245678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 190 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~ 264 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264 (377)
T ss_dssp EEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECT
T ss_pred EEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecC
Confidence 99999999999999542 34589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhc-cCCCCCCCh
Q 039137 796 PDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEML-DSRLPYPSL 871 (912)
Q Consensus 796 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 871 (912)
..... .....+++.|+|||++.+..++.++|||||||++|||++ |..||...... ....... ..+.+.+.
T Consensus 265 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~- 338 (377)
T 3cbl_A 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-----QTREFVEKGGRLPCPE- 338 (377)
T ss_dssp TSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-----HHHHHHHTTCCCCCCT-
T ss_pred CCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCC-
Confidence 32111 112235778999999998889999999999999999998 99998632111 0111111 11222222
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++|||++++++.|++...
T Consensus 339 ---~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 339 ---LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 234568899999999999999999999999998754
No 94
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.4e-40 Score=358.33 Aligned_cols=264 Identities=25% Similarity=0.365 Sum_probs=205.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC----e
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK----H 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~----~ 712 (912)
.++|++.+.||+|+||+||+|++. ++.||||++... ........+|+.++++++||||+++++++.... .
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCce
Confidence 468999999999999999999884 889999998532 223455667999999999999999999998754 3
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-------CCCeeecCCCCCCeEEcCCCcEEE
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC-------FPPIVHRDISSKNVLLDLGYEAHV 785 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlk~~Nill~~~~~~kl 785 (912)
.++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||+.. .++|+||||||+||+++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 6999999999999999954 34899999999999999999999861 238999999999999999999999
Q ss_pred eccccccccCCCCC--CccccccccccccccccccC-----CCCcchhHHHHHHHHHHHHhCCCCccchhcccccc----
Q 039137 786 SDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTL-----KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS---- 854 (912)
Q Consensus 786 ~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-----~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~---- 854 (912)
+|||+++....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||+...+.....
T Consensus 173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~ 252 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEE 252 (322)
T ss_dssp CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHH
T ss_pred ccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhh
Confidence 99999987654332 23346789999999998863 45678999999999999999999986322111000
Q ss_pred -------ccchhhhccC-CCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 855 -------SNMNIEMLDS-RLPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 855 -------~~~~~~~~~~-~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.......... ..+... ......+..+.+++.+||+.||++|||++|+++.|++.-.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 253 IGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp HCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0000001111 111111 1122345668999999999999999999999999998643
No 95
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=359.70 Aligned_cols=251 Identities=23% Similarity=0.347 Sum_probs=191.6
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||+||+|+++ +++.||||++.... ..+.+.+|+++++.++||||+++++++..++..+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 3567999999999999999999986 68899999987532 3456788999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---CCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~Dfgla 791 (912)
+||||+++|+|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||++
T Consensus 125 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a 198 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198 (349)
T ss_dssp EEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--
T ss_pred EEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccc
Confidence 99999999999999843 35689999999999999999999999 9999999999999975 889999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......+.......+..
T Consensus 199 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~i~~~~~~~~~~ 273 (349)
T 2w4o_A 199 KIVEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERG----DQFMFRRILNCEYYFISP 273 (349)
T ss_dssp ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTC----HHHHHHHHHTTCCCCCTT
T ss_pred cccCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcc----cHHHHHHHHhCCCccCCc
Confidence 866433 223456789999999999999999999999999999999999999852211 111122222233222222
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22334567889999999999999999999875
No 96
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2e-39 Score=362.24 Aligned_cols=252 Identities=20% Similarity=0.322 Sum_probs=207.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|..+ +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 125 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 125 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEE
Confidence 467999999999999999999876 78999999986432 2245678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC--CCcEEEeccccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL--GYEAHVSDFGIAKF 793 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~Dfgla~~ 793 (912)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++.
T Consensus 126 v~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 126 ILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEeccccee
Confidence 99999999999998432 34689999999999999999999999 9999999999999974 56799999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+....
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-----~~~~~i~~~~~~~~~~~~ 274 (387)
T 1kob_A 201 LNPD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-----ETLQNVKRCDWEFDEDAF 274 (387)
T ss_dssp CCTT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHHHHHCCCCCCSSTT
T ss_pred cCCC-cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCCCCCcccc
Confidence 6543 2334557999999999999999999999999999999999999998632111 111112222222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+..+.++|.+||+.||++|||+.|+++
T Consensus 275 ~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 275 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 334567889999999999999999999875
No 97
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1e-39 Score=361.05 Aligned_cols=263 Identities=22% Similarity=0.394 Sum_probs=212.2
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS 708 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 708 (912)
...++|++.+.||+|+||.||+|++. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34678999999999999999999874 34789999987542 2235678999999999999999999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCC---------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeee
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDAS---------------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVH 767 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 767 (912)
..+..++||||+++|+|.+++..... ...+++.+++.++.||+.||+|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 99999999999999999999965321 25689999999999999999999999 9999
Q ss_pred cCCCCCCeEEcCCCcEEEeccccccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCc
Q 039137 768 RDISSKNVLLDLGYEAHVSDFGIAKFLNPDS--SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPR 844 (912)
Q Consensus 768 ~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf 844 (912)
|||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 9999999999999999999999998654322 12234567899999999998899999999999999999999 99998
Q ss_pred cchhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 845 DFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..... ......+.+...+..+ ...+..+.+++.+||+.||++|||+.++++.|++...+
T Consensus 278 ~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 278 YGMAH-----EEVIYYVRDGNILACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp TTSCH-----HHHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred CCCCh-----HHHHHHHhCCCcCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 52211 1111112222221111 12345688999999999999999999999999987653
No 98
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.1e-39 Score=353.78 Aligned_cols=260 Identities=23% Similarity=0.410 Sum_probs=212.4
Q ss_pred hcCCCCCceeeecCceEEEEEEe------CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
.++|.+.+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|+++++.++||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 46799999999999999999985 245789999987432 233567889999999999999999999999999
Q ss_pred CeeeEEEeecCCCChhhHhhccCC---------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecC
Q 039137 711 KHSFIIYEYLESGSLDKILCNDAS---------------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRD 769 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 769 (912)
+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999965432 23489999999999999999999999 999999
Q ss_pred CCCCCeEEcCCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccc
Q 039137 770 ISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDF 846 (912)
Q Consensus 770 lk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~ 846 (912)
|||+||+++.++.+||+|||+++........ .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876543322 233456789999999999889999999999999999999 9999853
Q ss_pred hhccccccccchhhhccCC-CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 847 LFEMSSSSSNMNIEMLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
... ........... ...+ ...+..+.+++.+||+.||++|||+.|+++.|++.+.+
T Consensus 256 ~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 256 IPP-----ERLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp CCG-----GGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCH-----HHHHHHhhcCCcCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 211 11111111111 1111 12345688999999999999999999999999998765
No 99
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=7.2e-40 Score=361.40 Aligned_cols=247 Identities=21% Similarity=0.314 Sum_probs=204.4
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||+||+|+.+ +++.||+|++....... ....+.+.+|..++..+ +||+|+++++++.+.+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhc-chHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 3578999999999999999999986 58899999986432110 11346678999999988 799999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
|+||||+++|+|.+++... +.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~ 170 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 170 (353)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccc
Confidence 9999999999999999543 4689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
............||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+......++.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~~p~--- 242 (353)
T 2i0e_A 171 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEHNVAYPK--- 242 (353)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCT---
T ss_pred cccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhCCCCCCC---
Confidence 5444445566789999999999999999999999999999999999999986221 11222233334444442
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTM 898 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~ 898 (912)
..+..+.++|.+||+.||++||++
T Consensus 243 -~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 243 -SMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp -TSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred -CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 234568899999999999999964
No 100
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4e-39 Score=352.53 Aligned_cols=255 Identities=19% Similarity=0.288 Sum_probs=209.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc--hHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM--SFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
.++|++.+.||+|+||.||+|+++ +++.||+|++........ ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 457999999999999999999976 689999999875443221 11367789999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC----cEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY----EAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Dfg 789 (912)
++||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 999999999999999943 34689999999999999999999999 999999999999999888 79999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
++...... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ..............+
T Consensus 165 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~ 238 (321)
T 2a2a_A 165 LAHEIEDG-VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANITSVSYDFD 238 (321)
T ss_dssp TCEECCTT-CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHTTCCCCC
T ss_pred cceecCcc-ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcccccC
Confidence 99876543 233456789999999999999999999999999999999999999852211 111122222222333
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2222334566889999999999999999999876
No 101
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=362.40 Aligned_cols=259 Identities=23% Similarity=0.368 Sum_probs=211.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC--------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP--------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFC 707 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 707 (912)
.++|++.+.||+|+||+||+|++. ++..||||++.... .....+++.+|+++++.+ +||||+++++++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---TEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---CHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 468999999999999999999852 34579999987542 233567889999999999 899999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccCC-------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCC
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKN 774 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 774 (912)
..++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 999999999999999999999965432 24589999999999999999999999 99999999999
Q ss_pred eEEcCCCcEEEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccc
Q 039137 775 VLLDLGYEAHVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMS 851 (912)
Q Consensus 775 ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~ 851 (912)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-- 299 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 299 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999987654322 2334567889999999999999999999999999999999 9999852211
Q ss_pred cccccchhhhccC-CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 852 SSSSNMNIEMLDS-RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 852 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
......+... ....+ ...+..+.+++.+||+.||++|||++|+++.|++.+.
T Consensus 300 ---~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 352 (382)
T 3tt0_A 300 ---EELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352 (382)
T ss_dssp ---HHHHHHHHTTCCCCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111 11111 1234568899999999999999999999999998764
No 102
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=354.72 Aligned_cols=248 Identities=25% Similarity=0.371 Sum_probs=205.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+..|+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 83 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-LKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM 83 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence 367999999999999999999876 79999999986421110 1134667899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 v~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 84 IMDYIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp EECCCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 9999999999999954 34689999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.. .....||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+......++. .
T Consensus 158 ~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~p~----~ 225 (318)
T 1fot_A 158 DV---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----TMKTYEKILNAELRFPP----F 225 (318)
T ss_dssp SC---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHCCCCCCT----T
T ss_pred Cc---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCC----C
Confidence 32 345679999999999999999999999999999999999999985211 11122233333333332 2
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRP-----TMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 903 (912)
.+..+.+++.+|++.||++|| +++|+++
T Consensus 226 ~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 345678999999999999999 7887763
No 103
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.5e-40 Score=354.95 Aligned_cols=262 Identities=26% Similarity=0.401 Sum_probs=205.6
Q ss_pred hcCCCCCceeeecCceEEEEEEe-----CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV-----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~- 710 (912)
.++|++.+.||+|+||+||+|++ .+++.||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 84 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC----CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 46799999999999999999984 36889999998643 223567889999999999999999999999654
Q ss_pred -CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 711 -KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 711 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
...++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 85 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 5689999999999999999553 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcc-----cccccc-----
Q 039137 790 IAKFLNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEM-----SSSSSN----- 856 (912)
Q Consensus 790 la~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~-----~~~~~~----- 856 (912)
+++........ .....+++.|+|||++.+..++.++||||||+++|||++|..||...... ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T 3ugc_A 160 LTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239 (295)
T ss_dssp SCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHH
T ss_pred ccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHH
Confidence 99876543221 22345677899999999999999999999999999999999997632211 000000
Q ss_pred chhhhc--cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 857 MNIEML--DSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 857 ~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
...... ..+.+.+ ...+..+.+++.+||+.||++|||++|+++.|++...+
T Consensus 240 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 240 HLIELLKNNGRLPRP----DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHTTCCCCCC----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhccCcCCCC----cCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 000111 1122222 22345688999999999999999999999999988754
No 104
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=6.9e-40 Score=364.83 Aligned_cols=267 Identities=22% Similarity=0.367 Sum_probs=212.5
Q ss_pred HHHHHHHhcCCCCCceeeecCceEEEEEEe------CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCcccc
Q 039137 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVK 702 (912)
Q Consensus 630 ~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~ 702 (912)
..++....++|++.+.||+|+||.||+|++ .+++.||||++.... .....+.+.+|+++++++ +||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---CHHHHHHHHHHHHHHHhhcCCcceee
Confidence 445555678999999999999999999973 256889999997532 222457799999999999 7999999
Q ss_pred EEEEEEcCCe-eeEEEeecCCCChhhHhhccCC-----------------------------------------------
Q 039137 703 FYGFCSHPKH-SFIIYEYLESGSLDKILCNDAS----------------------------------------------- 734 (912)
Q Consensus 703 l~~~~~~~~~-~~lv~e~~~~g~L~~~l~~~~~----------------------------------------------- 734 (912)
+++++..++. .++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 9999987654 8999999999999999965432
Q ss_pred ----------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCCCC
Q 039137 735 ----------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDS 798 (912)
Q Consensus 735 ----------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 798 (912)
...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12289999999999999999999999 99999999999999999999999999998664432
Q ss_pred C--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChhhH
Q 039137 799 S--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLHVQ 874 (912)
Q Consensus 799 ~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 874 (912)
. ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .......... ....+.
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~---- 319 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPD---- 319 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHHTCCCCCCT----
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh----HHHHHHHHcCCCCCCCC----
Confidence 2 2234567899999999999999999999999999999998 99998522110 1111111111 112221
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++|||++|+++.|++.+.
T Consensus 320 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 233568899999999999999999999999998764
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.5e-40 Score=357.69 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=198.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe---
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH--- 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--- 712 (912)
.++|++.+.||+|+||.||+|++. +++.||||++....... ....+.+.+|+.+++.++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARD-PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTS-HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCC-HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence 468999999999999999999974 78999999997654433 2345678999999999999999999999876543
Q ss_pred -eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 713 -SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 713 -~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
.++||||+++++|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred ccEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 4999999999999999954 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCC
Q 039137 792 KFLNPDSS---NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPY 868 (912)
Q Consensus 792 ~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 868 (912)
+....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~~ 238 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----VSVAYQHVREDPIP 238 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHCCCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCCCCC
Confidence 87654322 22345689999999999999999999999999999999999999863211 11111122222222
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHH-HHHHH
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVS-QLLCE 907 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl-~~L~~ 907 (912)
+.......+..+.+++.+||+.||++||++.+++ ..+.+
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 278 (311)
T 3ork_A 239 PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 278 (311)
T ss_dssp HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence 2112223456688999999999999999665544 44443
No 106
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.4e-39 Score=358.17 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=204.8
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||+||+|.++ +++.||+|++...... ..+|++++.++ +||||+++++++.+++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~ 91 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD--------PTEEIEILLRYGQHPNIITLKDVYDDGKYV 91 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC--------CHHHHHHHHHHTTSTTBCCEEEEEECSSEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC--------hHHHHHHHHHhcCCCCcCeEEEEEEcCCEE
Confidence 3567999999999999999999876 6889999999754322 23688888888 799999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC----CcEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG----YEAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~----~~~kl~Dfg 789 (912)
|+||||+++|+|.+++.. .+.+++.++..++.||+.||+|||++ +|+||||||+||++.++ +.+||+|||
T Consensus 92 ~lv~E~~~gg~L~~~i~~---~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 92 YVVTELMKGGELLDKILR---QKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEECCCCSCBHHHHHHT---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 999999999999999844 34689999999999999999999999 99999999999998543 359999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
+++.............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........+.......+
T Consensus 166 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~~~~~ 243 (342)
T 2qr7_A 166 FAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSGKFSLS 243 (342)
T ss_dssp TCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHCCCCCC
T ss_pred CcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccCCcccC
Confidence 999776655555667899999999999888899999999999999999999999863211 111111222223333333
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 244 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2223344567889999999999999999998875
No 107
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.1e-39 Score=353.96 Aligned_cols=262 Identities=21% Similarity=0.361 Sum_probs=196.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCCC----CEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPSG----EIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
..++|++.+.||+|+||+||+|++... ..||||++....... ...+.+.+|+++++.++||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIAS--SDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------C--HHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCH--HHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 346899999999999999999987633 279999987543322 24678999999999999999999999998776
Q ss_pred ee------eEEEeecCCCChhhHhhccCC---cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc
Q 039137 712 HS------FIIYEYLESGSLDKILCNDAS---AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE 782 (912)
Q Consensus 712 ~~------~lv~e~~~~g~L~~~l~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 782 (912)
.. ++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 999999999999999854322 22589999999999999999999999 9999999999999999999
Q ss_pred EEEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchh
Q 039137 783 AHVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNI 859 (912)
Q Consensus 783 ~kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 859 (912)
+||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~ 250 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----AEIYN 250 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHH
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----HHHHH
Confidence 99999999987644322 1223456789999999999999999999999999999999 9999863211 11111
Q ss_pred hhccCC-CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 860 EMLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 860 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
...... ...+ ...+..+.+++.+||+.||++|||+.++++.|++.+..
T Consensus 251 ~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~ 299 (323)
T 3qup_A 251 YLIGGNRLKQP----PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH 299 (323)
T ss_dssp HHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHhcCCCCCCC----CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111 1222 12345688999999999999999999999999988753
No 108
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=364.73 Aligned_cols=267 Identities=22% Similarity=0.331 Sum_probs=213.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC--ee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK--HS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~--~~ 713 (912)
.++|++.+.||+|+||+||+|++. +++.||||++...... ...+.+.+|+++++.++||||+++++++...+ ..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG---SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc---chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 367999999999999999999886 5899999998643221 13567789999999999999999999998765 67
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE----cCCCcEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL----DLGYEAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~kl~Dfg 789 (912)
++||||+++|+|.+++........+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG 161 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGG
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCC
Confidence 99999999999999996655445599999999999999999999999 99999999999999 777889999999
Q ss_pred cccccCCCCCCcccccccccccccccccc--------CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYT--------LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......... .......
T Consensus 162 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~-~~~~~~~ 239 (396)
T 4eut_A 162 AARELEDD-EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN-KEVMYKI 239 (396)
T ss_dssp GCEECCCG-GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC-HHHHHHH
T ss_pred CceEccCC-CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch-HHHHHHH
Confidence 99876543 23345679999999998865 45788999999999999999999998632211110 0001111
Q ss_pred ---------------------ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 862 ---------------------LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 862 ---------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
+....+............+.+++.+||+.||++||+++|+++.+++.+.+
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 11122222223356677788999999999999999999999999887653
No 109
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.3e-39 Score=344.57 Aligned_cols=251 Identities=22% Similarity=0.334 Sum_probs=208.9
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||.||+|.++ ++..||+|++...... ..+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE----DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIY 82 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS----CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEE
Confidence 3567999999999999999999876 5778999998754332 3567889999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla 791 (912)
+||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 83 lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~ 156 (277)
T 3f3z_A 83 LVMELCTGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156 (277)
T ss_dssp EEEECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEeccCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccc
Confidence 99999999999998844 34589999999999999999999999 99999999999999 78889999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
...... .......|++.|+|||++.+. ++.++||||+|+++|||++|+.||.... ...............+..
T Consensus 157 ~~~~~~-~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~ 229 (277)
T 3f3z_A 157 ARFKPG-KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPT-----DSEVMLKIREGTFTFPEK 229 (277)
T ss_dssp EECCTT-SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCHH
T ss_pred eeccCc-cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCCCCCch
Confidence 876543 233456799999999988765 8999999999999999999999986321 112222333344444433
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 230 DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 33345667889999999999999999999875
No 110
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=360.80 Aligned_cols=263 Identities=23% Similarity=0.368 Sum_probs=208.1
Q ss_pred HhcCCCCCceeeecCceEEEEEEe------CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCS 708 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 708 (912)
..++|++.+.||+|+||.||+|++ .++..||+|++...... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS---SEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCH---HHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 457899999999999999999985 24568999999754322 2456789999999999 8999999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCC--------------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeec
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDAS--------------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHR 768 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 768 (912)
..+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 99999999999999999999965432 13479999999999999999999999 99999
Q ss_pred CCCCCCeEEcCCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcc
Q 039137 769 DISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRD 845 (912)
Q Consensus 769 Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~ 845 (912)
||||+||+++.++.+||+|||++......... .....+|+.|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999876543322 234557889999999999899999999999999999998 999985
Q ss_pred chhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 846 FLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..... .............+. ....+..+.+++.+||+.||.+|||+.|+++.|+..+.+
T Consensus 277 ~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 277 GIPVD-----ANFYKLIQNGFKMDQ--PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp TCCCS-----HHHHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cCCcH-----HHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 32111 111111111111110 012345688999999999999999999999999987653
No 111
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.6e-39 Score=361.16 Aligned_cols=257 Identities=23% Similarity=0.278 Sum_probs=200.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHH-HhhcCCCccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA-LTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||.||+|+.+ +++.||+|++......... ..+.+.+|..+ ++.++||||+++++++.+.+..|
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~-~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK-EEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhH-HHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 467999999999999999999986 6889999998654322211 34556677776 57789999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||||+++|+|.+++.+ .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 116 lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 99999999999999954 34688999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 795 NPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+......++.
T Consensus 190 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~~~~~---- 260 (373)
T 2r5t_A 190 IEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNKPLQLKP---- 260 (373)
T ss_dssp BCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----HHHHHHHHHHSCCCCCS----
T ss_pred ccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhcccCCCC----
Confidence 544445566789999999999999999999999999999999999999985211 11222233333333332
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHH-HHHHHHhh
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRV-SQLLCEKI 909 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~ev-l~~L~~~l 909 (912)
..+..+.++|.+||+.||++||++.+. .+.+++.+
T Consensus 261 ~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~ 296 (373)
T 2r5t_A 261 NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296 (373)
T ss_dssp SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence 233557899999999999999998643 33344333
No 112
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.2e-39 Score=346.01 Aligned_cols=253 Identities=21% Similarity=0.351 Sum_probs=208.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|.++ +++.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC--HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 478999999999999999999876 6899999998654322 2245778899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc---EEEecccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVSDFGIAK 792 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~Dfgla~ 792 (912)
||||+++++|.+.+... ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||.+.
T Consensus 83 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~ 156 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156 (284)
T ss_dssp EECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence 99999999998888443 4689999999999999999999999 9999999999999986655 9999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
..... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ..............+...
T Consensus 157 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~ 230 (284)
T 3kk8_A 157 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQIKAGAYDYPSPE 230 (284)
T ss_dssp ECCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCCCCCTTT
T ss_pred EcccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-----hHHHHHHHhccccCCchh
Confidence 76543 333456789999999999999999999999999999999999999852111 111222222222233222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2334566889999999999999999999876
No 113
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=361.84 Aligned_cols=252 Identities=25% Similarity=0.382 Sum_probs=203.8
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|+++++.++||||+++++++.+.+..|+|
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV-ERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcc-cHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 67999999999999999999876 6889999998542111 111346788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+.+|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 167 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR 167 (384)
T ss_dssp ECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence 999999999999944 35689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 797 DSSNWSELAGTHGYVAPELAYT---LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..............++.
T Consensus 168 ~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~~~~~~p~--- 241 (384)
T 4fr4_A 168 E-TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFETTVVTYPS--- 241 (384)
T ss_dssp T-CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHHCCCCCCT---
T ss_pred C-CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhhcccCCCC---
Confidence 3 34456789999999999864 458999999999999999999999985221111 11111122222233332
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPT-MKRVSQ 903 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 903 (912)
..+..+.++|.+||+.||++||+ ++++.+
T Consensus 242 -~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 242 -AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 23456889999999999999998 666553
No 114
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.5e-40 Score=360.93 Aligned_cols=262 Identities=26% Similarity=0.418 Sum_probs=210.3
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CC-----CEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEE
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SG-----EIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFC 707 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 707 (912)
...++|++.+.||+|+||.||+|++. ++ ..||+|++.... .....+.+.+|+.+++.+ +||||+++++++
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---HADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 34578999999999999999999864 22 479999987543 222567789999999999 899999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccCC-----------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeE
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDAS-----------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVL 776 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nil 776 (912)
..++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999954321 34579999999999999999999999 9999999999999
Q ss_pred EcCCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccc
Q 039137 777 LDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSS 853 (912)
Q Consensus 777 l~~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~ 853 (912)
++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--- 273 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN--- 273 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS---
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh---
Confidence 999999999999999866443222 233456789999999998899999999999999999998 99998532111
Q ss_pred cccchhhhccC--CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 854 SSNMNIEMLDS--RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 854 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
......... ....+. ..+..+.+++.+||+.||.+|||+.|+++.|++...+
T Consensus 274 --~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~ 327 (333)
T 2i1m_A 274 --SKFYKLVKDGYQMAQPA----FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE 327 (333)
T ss_dssp --HHHHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence 111111111 111111 1235678999999999999999999999999987653
No 115
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3e-39 Score=352.65 Aligned_cols=261 Identities=20% Similarity=0.326 Sum_probs=190.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||+||+|.++ +++.||+|++....... ..+.+.+|+++++.++||||+++++++..++..+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 79 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEG---TPSTAIREISLMKELKHENIVRLYDVIHTENKLT 79 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTC---SCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccc---cHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEE
Confidence 3468999999999999999999876 68999999987543222 3456789999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccC---CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDA---SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
+||||++ |+|.+++.... ....+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 155 (317)
T 2pmi_A 80 LVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLA 155 (317)
T ss_dssp EEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSC
T ss_pred EEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccc
Confidence 9999998 59999885432 224589999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhccccc----------cccchhh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----------SSNMNIE 860 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~----------~~~~~~~ 860 (912)
+.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||......... .......
T Consensus 156 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp EETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGG
T ss_pred eecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhh
Confidence 8776554445566889999999998764 5899999999999999999999998632110000 0000000
Q ss_pred -----hccCCCCC--CC-h-------hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 861 -----MLDSRLPY--PS-L-------HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 861 -----~~~~~~~~--~~-~-------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+. +. . .....+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000 00 0 00012356889999999999999999998875
No 116
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.7e-39 Score=358.50 Aligned_cols=247 Identities=21% Similarity=0.274 Sum_probs=205.2
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||.||+|+++ +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVK-LKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhcc-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 67999999999999999999976 79999999985421110 11346788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++|+|.+++.+. +.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 120 ~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp EECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999999543 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKK 876 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 876 (912)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+......++. ..
T Consensus 194 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~p~----~~ 261 (350)
T 1rdq_E 194 R---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIVSGKVRFPS----HF 261 (350)
T ss_dssp C---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCT----TC
T ss_pred C---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHHHHHcCCCCCCC----CC
Confidence 2 335679999999999999999999999999999999999999985221 11122223333333332 23
Q ss_pred HHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 039137 877 LMSIMQVAFSCLDQNPESRPT-----MKRVSQ 903 (912)
Q Consensus 877 ~~~l~~li~~cl~~dP~~RPt-----~~evl~ 903 (912)
+..+.++|.+||+.||++||+ ++|+++
T Consensus 262 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 456889999999999999998 776653
No 117
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.1e-39 Score=350.84 Aligned_cols=261 Identities=16% Similarity=0.217 Sum_probs=209.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||.||+|++. +++.||+|++..... .+.+.+|+..++.+ +|++++++++++......+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~ 82 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNV 82 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeE
Confidence 467999999999999999999864 789999999864422 23467899999999 7999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc-----EEEeccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE-----AHVSDFG 789 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~Dfg 789 (912)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 83 lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 83 LVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred EEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999999 89999999543 34589999999999999999999999 9999999999999987776 9999999
Q ss_pred cccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 790 IAKFLNPDSS-------NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 790 la~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~--~~~~~~~ 234 (298)
T 1csn_A 157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK--QKYERIG 234 (298)
T ss_dssp TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH--HHHHHHH
T ss_pred cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH--HHHHHHH
Confidence 9987654432 134567999999999999999999999999999999999999998632111110 0001110
Q ss_pred cCCCCCC-ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 863 DSRLPYP-SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 863 ~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
......+ .......+..+.+++.+||+.||++|||++++++.|++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 235 EKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000000 111112345788999999999999999999999999988754
No 118
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.7e-39 Score=352.69 Aligned_cols=263 Identities=25% Similarity=0.400 Sum_probs=212.5
Q ss_pred HhcCCCCCceeeecCceEEEEEEe------CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCS 708 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~ 708 (912)
..++|++.+.||+|+||.||+|++ .+++.||+|++.... .....+.+.+|+.+++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA---HLTEREALMSELKVLSYLGNHMNIVNLLGACT 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch---hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence 346799999999999999999974 256789999987542 222567899999999999 8999999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCC---------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCC
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDAS---------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSK 773 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 773 (912)
.++..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 174 (313)
T 1t46_A 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAAR 174 (313)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGG
T ss_pred cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccc
Confidence 99999999999999999999965432 22589999999999999999999999 9999999999
Q ss_pred CeEEcCCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhcc
Q 039137 774 NVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEM 850 (912)
Q Consensus 774 Nill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~ 850 (912)
||+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......
T Consensus 175 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 254 (313)
T 1t46_A 175 NILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD 254 (313)
T ss_dssp GEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS
T ss_pred eEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch
Confidence 999999999999999999876544322 223456789999999999899999999999999999999 99998532111
Q ss_pred ccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 851 SSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
............... ....+..+.+++.+||+.||.+|||+.|+++.|++.+.+
T Consensus 255 -----~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 255 -----SKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp -----HHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----hHHHHHhccCCCCCC--cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 011111111111100 112345688999999999999999999999999998765
No 119
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-39 Score=358.54 Aligned_cols=263 Identities=24% Similarity=0.291 Sum_probs=206.8
Q ss_pred HHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCC-CCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 633 IISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLP-GEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 633 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
+....++|++.+.||+|+||+||+|++. +++.||+|++..... .......+.+.+|+++++.++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 3456788999999999999999999875 788999999854311 01112467899999999999999999999999999
Q ss_pred CeeeEEEeecCCCChhhHhhccC-------------------------------------CcccCCHHHHHHHHHHHHHH
Q 039137 711 KHSFIIYEYLESGSLDKILCNDA-------------------------------------SAKELGWTQRLNVIKGVADA 753 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~i~~~ 753 (912)
+..++||||+++|+|.+++.... ....+++..++.++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999984211 12234678889999999999
Q ss_pred HHHHHhCCCCCeeecCCCCCCeEEcCCC--cEEEeccccccccCCCCC----Ccccccccccccccccccc--CCCCcch
Q 039137 754 LFYLHNNCFPPIVHRDISSKNVLLDLGY--EAHVSDFGIAKFLNPDSS----NWSELAGTHGYVAPELAYT--LKVTEKC 825 (912)
Q Consensus 754 L~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~Dfgla~~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~s 825 (912)
|+|||++ +|+||||||+||+++.++ .+||+|||+++....... ......||+.|+|||++.+ ..++.++
T Consensus 181 l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 9999999 999999999999998776 899999999986543221 2345678999999999875 6789999
Q ss_pred hHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 826 DVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 826 DvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
||||||+++|||++|+.||..... ..............+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVND-----ADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCh-----HHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999853211 1222233334443333333445567889999999999999999999876
No 120
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.9e-39 Score=346.02 Aligned_cols=256 Identities=27% Similarity=0.422 Sum_probs=202.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHH---HHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQ---EEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~---~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++............ +.+.+|+++++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367999999999999999999875 7899999998765443322111 67899999999999999999999996554
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCeEEcCCCc-----EEE
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHRDISSKNVLLDLGYE-----AHV 785 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~-----~kl 785 (912)
++||||+++|+|.+++... ...+++.+++.++.|++.|++|||++ + |+||||||+||+++.++. +||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred -eEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 7999999999998888543 35689999999999999999999999 8 999999999999988776 999
Q ss_pred eccccccccCCCCCCccccccccccccccccc--cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhcc
Q 039137 786 SDFGIAKFLNPDSSNWSELAGTHGYVAPELAY--TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLD 863 (912)
Q Consensus 786 ~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 863 (912)
+|||+++.... ......|++.|+|||++. ...++.++||||+|+++|||++|+.||+...... .........
T Consensus 171 ~Dfg~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~---~~~~~~~~~ 244 (287)
T 4f0f_A 171 ADFGLSQQSVH---SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK---IKFINMIRE 244 (287)
T ss_dssp CCCTTCBCCSS---CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH---HHHHHHHHH
T ss_pred CCCCccccccc---cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH---HHHHHHHhc
Confidence 99999975432 344567899999999984 4557899999999999999999999986221110 000111111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHH
Q 039137 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCE 907 (912)
Q Consensus 864 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 907 (912)
...... .....+..+.+++.+||+.||++|||++|+++.|++
T Consensus 245 ~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 245 EGLRPT--IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp SCCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred cCCCCC--CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111110 112234568899999999999999999999999986
No 121
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.8e-39 Score=347.20 Aligned_cols=261 Identities=25% Similarity=0.394 Sum_probs=197.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||+||+|++. ..||+|++...... ....+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPT--PQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCC--HHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 468999999999999999999864 35999998755332 33567899999999999999999999965 55678999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 172 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR 172 (289)
T ss_dssp EECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred EEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceecccccc
Confidence 9999999999998433 35689999999999999999999999 999999999999999999999999999986543
Q ss_pred C--CCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCC-CCC
Q 039137 797 D--SSNWSELAGTHGYVAPELAY---TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLP-YPS 870 (912)
Q Consensus 797 ~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~ 870 (912)
. ........|++.|+|||++. +..++.++||||+|+++|||++|+.||....... ............ ...
T Consensus 173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~ 248 (289)
T 3og7_A 173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIEMVGRGSLSPDLS 248 (289)
T ss_dssp -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH----HHHHHHHHTSCCCCTT
T ss_pred ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH----HHHHHhcccccCcchh
Confidence 2 22234567899999999886 5678889999999999999999999986321111 011111111111 111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
......+..+.+++.+||+.||++|||++|+++.|++...|
T Consensus 249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~e 289 (289)
T 3og7_A 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELARE 289 (289)
T ss_dssp SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTCC
T ss_pred hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhhC
Confidence 11123345688999999999999999999999999988654
No 122
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3e-39 Score=351.45 Aligned_cols=264 Identities=20% Similarity=0.287 Sum_probs=203.2
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
...++|++.+.||+|+||.||+|++. +++.||+|++....... ....+.+.+|+.+++.++||||+++++++..++..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSD-PVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccC-HHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 34578999999999999999999976 78899999987543222 22457789999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
++||||+++++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 110 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~ 183 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASA 183 (309)
T ss_dssp EEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC---
T ss_pred EEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcc
Confidence 9999999999999999543 4689999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 794 LNPDS-SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 794 ~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
..... .......+++.|+|||++.+..++.++||||||+++|||++|+.||...... ..........+.+...
T Consensus 184 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~ 257 (309)
T 2h34_A 184 TTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------VMGAHINQAIPRPSTV 257 (309)
T ss_dssp -------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH------HHHHHHHSCCCCGGGT
T ss_pred ccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH------HHHHHhccCCCCcccc
Confidence 65432 2233557899999999999989999999999999999999999998632111 1111122222222122
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhhc
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRP-TMKRVSQLLCEKIFE 911 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~l~~ 911 (912)
....+..+.+++.+||+.||++|| +++++++.|++.+.+
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 223345688999999999999999 999999999987643
No 123
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=361.02 Aligned_cols=260 Identities=24% Similarity=0.335 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
.++|++.+.||+|+||+||+|++. +++.||||++.... ......++.+|+.+++.++||||+++++++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 367899999999999999999843 56789999986432 223556788999999999999999999999999
Q ss_pred CeeeEEEeecCCCChhhHhhccC----CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC---cE
Q 039137 711 KHSFIIYEYLESGSLDKILCNDA----SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY---EA 783 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~ 783 (912)
+..++||||+++|+|.+++.... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999996543 224589999999999999999999999 999999999999999555 59
Q ss_pred EEeccccccccCCCC--CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhh
Q 039137 784 HVSDFGIAKFLNPDS--SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIE 860 (912)
Q Consensus 784 kl~Dfgla~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 860 (912)
||+|||+++...... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-----~~~~~~ 298 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----QEVLEF 298 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHHH
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH
Confidence 999999997543221 22334567899999999999999999999999999999998 9999852211 111111
Q ss_pred hccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 861 MLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.......... ...+..+.+++.+||+.||++|||++|+++.|+....
T Consensus 299 i~~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 299 VTSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp HHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 1111111111 1233458899999999999999999999999987643
No 124
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=349.94 Aligned_cols=254 Identities=26% Similarity=0.453 Sum_probs=199.1
Q ss_pred cCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIY 717 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~ 717 (912)
++|++.+.||+|+||+||+|++ .++.||+|++... ...+.+.+|++++++++||||+++++++. +..++||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~ 78 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE------SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVM 78 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST------THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh------hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEE
Confidence 5788999999999999999988 4788999998532 14678899999999999999999999886 4589999
Q ss_pred eecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc-EEEeccccccccCC
Q 039137 718 EYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE-AHVSDFGIAKFLNP 796 (912)
Q Consensus 718 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~-~kl~Dfgla~~~~~ 796 (912)
||+++|+|.+++........+++.+++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++.....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 99999999999976655556889999999999999999999932129999999999999998886 79999999976543
Q ss_pred CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCC-CCCCChhhHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSR-LPYPSLHVQK 875 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 875 (912)
. .....|++.|+|||++.+..++.++||||||+++|||++|+.||+...... ........... .+.+ ..
T Consensus 159 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~----~~ 228 (307)
T 2eva_A 159 H---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPA---FRIMWAVHNGTRPPLI----KN 228 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSH---HHHHHHHHTTCCCCCB----TT
T ss_pred c---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccH---HHHHHHHhcCCCCCcc----cc
Confidence 2 234468999999999999999999999999999999999999986321100 00111111111 1111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999988654
No 125
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.9e-38 Score=362.71 Aligned_cols=355 Identities=20% Similarity=0.218 Sum_probs=307.4
Q ss_pred CCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceee
Q 039137 84 ERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLH 163 (912)
Q Consensus 84 ~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 163 (912)
.++..+++.++.+.+. + +|+.+++|++|+|++|++++. | ++.+++|++|+|++|++++ +| ++.+++|++|+
T Consensus 42 ~~L~~L~Ls~n~l~~~--~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM--T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLN 112 (457)
T ss_dssp TTCCEEECCSSCCCCC--T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEE
T ss_pred CCCCEEEccCCCcccC--h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEE
Confidence 4678889998888864 2 689999999999999999974 4 9999999999999999986 44 89999999999
Q ss_pred cccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccC
Q 039137 164 ISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSG 243 (912)
Q Consensus 164 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 243 (912)
+++|++++ +| ++.+++|++|++++|++++ ++ ++++++|++|++++|...+.+ .++.+++|+.|++++|++++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 99999996 55 8999999999999999997 43 899999999999999776666 58899999999999999996
Q ss_pred ccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCC
Q 039137 244 AIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGT 323 (912)
Q Consensus 244 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 323 (912)
+| ++.+++|+.|++++|++++. .++.+++|++|++++|++++ +| +..+++|+.|++++|++++.+ ++.
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~ 252 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VST 252 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHH
Confidence 45 88999999999999999975 48899999999999999997 55 889999999999999999864 567
Q ss_pred CCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEE
Q 039137 324 YPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLS 403 (912)
Q Consensus 324 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 403 (912)
+++|+.|++++|+ |+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|.. ..+|+.|+
T Consensus 253 l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~---~~~L~~L~ 313 (457)
T 3bz5_A 253 LSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ---AAGITELD 313 (457)
T ss_dssp CTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT---TCCCSCCC
T ss_pred CCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC---CCcceEec
Confidence 7899999998764 5678899999888887 467899999999999988877753 34566665
Q ss_pred ccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCc
Q 039137 404 LSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483 (912)
Q Consensus 404 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 483 (912)
+++| ++|++|++++|+++++ .+..+++|+.|++++|++++ ++.|..|++++|.+.|
T Consensus 314 l~~~-------------~~L~~L~L~~N~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g 369 (457)
T 3bz5_A 314 LSQN-------------PKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEA 369 (457)
T ss_dssp CTTC-------------TTCCEEECTTCCCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEE
T ss_pred hhhc-------------ccCCEEECCCCccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEe
Confidence 5554 6899999999999985 38899999999999999986 3577888999999987
Q ss_pred ccccccccccccccccccCccccCCCcccccc
Q 039137 484 KISSRICRMESLEKLNLSYNNLSGLIPRCFEE 515 (912)
Q Consensus 484 ~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 515 (912)
. ..+..|..+++++|+++|.+|..+..
T Consensus 370 ~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 370 E-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp E-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred c-----ceeeecCccccccCcEEEEcChhHhc
Confidence 5 46778999999999999999876543
No 126
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.1e-39 Score=349.37 Aligned_cols=264 Identities=22% Similarity=0.311 Sum_probs=200.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... ....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMD-AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 467999999999999999999874 78999999987543222 3356788999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccC-CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 716 IYEYLESGSLDKILCNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 999999999999985432 345689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 795 NPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
...........+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ..............+.. ...
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~--~~~ 261 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQCDYPPL--PSD 261 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTTCSCCC--CTT
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcccCCCC--ccc
Confidence 5544444556789999999999998999999999999999999999999852110 00011111111111111 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
..+..+.+++.+||+.||++|||++++++.|++..
T Consensus 262 ~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 262 HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 23456889999999999999999999999998764
No 127
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.9e-39 Score=343.69 Aligned_cols=248 Identities=21% Similarity=0.308 Sum_probs=181.5
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||.||+|++. +++.||+|++........ ...+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKS-DMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 57999999999999999999865 789999999876543222 2456788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+ ++++.+++.. ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 92 ~e~~-~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 92 IEYA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp EECC-CEEHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred ehhc-CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 9999 5678777743 34689999999999999999999999 999999999999999999999999999986644
Q ss_pred CCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
. .......||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||+.... ..............+. .
T Consensus 165 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~----~ 234 (275)
T 2eue_A 165 G-NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNISNGVYTLPK----F 234 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCCCCCT----T
T ss_pred c-ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCCCCc----c
Confidence 3 22344578999999999988765 7899999999999999999999863211 1111222222223322 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 3455789999999999999999999864
No 128
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.6e-39 Score=345.05 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=197.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeCC----CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPS----GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+..++.++||||+++++++. .+.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 89 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSS
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCc
Confidence 4678999999999999999998742 4569999986432 2335678999999999999999999999984 567
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 90 VWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp CEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred cEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 89999999999999999543 24689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCC
Q 039137 793 FLNPDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYP 869 (912)
Q Consensus 793 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~ 869 (912)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||..... ......+... ..+.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~ 239 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----NDVIGRIENGERLPMP 239 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----HHHHHHHHcCCCCCCC
Confidence 7654322 1233456789999999998899999999999999999997 9999863211 1111111111 11222
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
...+..+.+++.+||+.||++|||+.|+++.|++.+.+
T Consensus 240 ----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 240 ----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp ----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 12345688999999999999999999999999988653
No 129
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=358.65 Aligned_cols=247 Identities=20% Similarity=0.284 Sum_probs=199.3
Q ss_pred CCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEEEeec
Q 039137 642 AEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYL 720 (912)
Q Consensus 642 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 720 (912)
..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 3578999999999999875 78999999987532 225678999999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE--cCCCcEEEeccccccccCCCC
Q 039137 721 ESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL--DLGYEAHVSDFGIAKFLNPDS 798 (912)
Q Consensus 721 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill--~~~~~~kl~Dfgla~~~~~~~ 798 (912)
++++|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+++......
T Consensus 169 ~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~ 243 (373)
T 2x4f_A 169 DGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE 243 (373)
T ss_dssp TTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC
T ss_pred CCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc
Confidence 999999988542 34689999999999999999999999 99999999999999 567899999999998765432
Q ss_pred CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHHHH
Q 039137 799 SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLM 878 (912)
Q Consensus 799 ~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (912)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.......+.
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~ 317 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-----AETLNNILACRWDLEDEEFQDISE 317 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHTCCCSCSGGGTTSCH
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhccCCCChhhhccCCH
Confidence 33445799999999999988899999999999999999999999853211 111222223333333333334556
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 879 SIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 879 ~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+.++|.+||+.||.+|||+.|+++
T Consensus 318 ~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 318 EAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHhc
Confidence 7889999999999999999999986
No 130
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=346.93 Aligned_cols=252 Identities=23% Similarity=0.398 Sum_probs=183.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+.. +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMY-KAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhh-hhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 467999999999999999999874 7999999998532110 01124678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 99999999999999543 35689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
..........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .............+. .
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~----~ 234 (278)
T 3cok_A 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK-----NTLNKVVLADYEMPS----F 234 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSSCCCCCT----T
T ss_pred CCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH-----HHHHHHhhcccCCcc----c
Confidence 4444444567899999999999888999999999999999999999998632111 111111111112221 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 235 LSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 3356789999999999999999999875
No 131
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.8e-39 Score=371.75 Aligned_cols=251 Identities=22% Similarity=0.284 Sum_probs=197.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhh-hHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 467999999999999999999875 78999999986432111 1134567889999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||+++..
T Consensus 226 v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 226 VMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp EECCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EEeeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 9999999999999844 3468999999999999999999998 8 9999999999999999999999999999875
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 795 NPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+......++.
T Consensus 300 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~p~---- 370 (446)
T 4ejn_A 300 IKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEEIRFPR---- 370 (446)
T ss_dssp CC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCCCT----
T ss_pred cCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHHhCCCCCCc----
Confidence 5554555667899999999999999999999999999999999999999852211 1111222223333332
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 039137 875 KKLMSIMQVAFSCLDQNPESRP-----TMKRVSQ 903 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 903 (912)
..+..+.++|.+||+.||++|| +++|+++
T Consensus 371 ~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 371 TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 2345688999999999999999 9998874
No 132
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4e-39 Score=342.79 Aligned_cols=256 Identities=24% Similarity=0.402 Sum_probs=209.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|+++++.++||||+++++++..++..++|
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEE
Confidence 357899999999999999999998889999999975432 246788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 156 (267)
T 3t9t_A 82 TEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 156 (267)
T ss_dssp ECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred EeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccc
Confidence 9999999999999543 34688999999999999999999999 999999999999999999999999999986543
Q ss_pred CC-CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 797 DS-SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 797 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.. .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ...............+ .
T Consensus 157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~i~~~~~~~~~---~ 228 (267)
T 3t9t_A 157 DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDISTGFRLYKP---R 228 (267)
T ss_dssp HHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTTCCCCCC---T
T ss_pred ccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHHHhcCCcCCCC---c
Confidence 21 11223456788999999998889999999999999999999 8999852211 1111111111111111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 229 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 229 LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 224568899999999999999999999999998764
No 133
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.9e-39 Score=348.78 Aligned_cols=260 Identities=25% Similarity=0.396 Sum_probs=206.5
Q ss_pred cCCCCCceeeecCceEEEEEEe-----CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC--
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKV-----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP-- 710 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-- 710 (912)
++|++.+.||+|+||.||+|++ .+++.||+|++....... ..+.+.+|+++++.++||||+++++++...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGN---HIADLKKEIEILRNLYHENIVKYKGICTEDGG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----C---CHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccch---hHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 4588999999999999999983 378899999997543222 457788999999999999999999999876
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
...++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 172 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGL 172 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccc
Confidence 6689999999999999999543 24589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccc-----cc----cccch
Q 039137 791 AKFLNPDSS---NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMS-----SS----SSNMN 858 (912)
Q Consensus 791 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~-----~~----~~~~~ 858 (912)
+........ ......+|+.|+|||++.+..++.++||||+|+++|||++|..|+....... .. .....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 252 (302)
T 4e5w_A 173 TKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRL 252 (302)
T ss_dssp CEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred cccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHH
Confidence 987765432 2234567888999999999889999999999999999999999875321100 00 00000
Q ss_pred hhhcc--CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 859 IEMLD--SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 859 ~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
..... ...+.+ ...+..+.+++.+||+.||.+|||+.|+++.|++.+
T Consensus 253 ~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 253 VNTLKEGKRLPCP----PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhccCCCCCC----CCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 11111 111111 123456889999999999999999999999999875
No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.8e-39 Score=367.53 Aligned_cols=249 Identities=25% Similarity=0.386 Sum_probs=206.0
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|.+.+.||+|+||.||+|++. +|+.||||++....... ....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRS-LDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHH-TTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 67999999999999999999976 79999999986421110 11346788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++|+|.+++.. .+.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 ~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 95 MEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 999999999999943 45699999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+... .......+.+.....+. .
T Consensus 169 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~~~p~----~ 238 (476)
T 2y94_A 169 G-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKICDGIFYTPQ----Y 238 (476)
T ss_dssp T-CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHHHTTCCCCCT----T
T ss_pred c-ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCCcCCCc----c
Confidence 3 33445679999999999988766 689999999999999999999986211 11122222333333222 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 239 LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 2345789999999999999999999986
No 135
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=5.1e-39 Score=342.66 Aligned_cols=253 Identities=19% Similarity=0.299 Sum_probs=205.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC--Ceee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP--KHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~~~ 714 (912)
.++|++.+.||+|+||+||+|++ +++.||+|++..... .....+.+.+|+.+++.++||||+++++++..+ +..+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 85 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDW--STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTC--CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCE
T ss_pred HHHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeE
Confidence 35799999999999999999998 488999999976432 233567799999999999999999999999887 7889
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
+||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ + |+||||||+||+++.++.++++|||++.
T Consensus 86 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 86 LITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp EEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred eeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEecccee
Confidence 999999999999999543 233589999999999999999999998 7 9999999999999999999999999876
Q ss_pred ccCCCCCCccccccccccccccccccCCCCc---chhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC--CCC
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTE---KCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS--RLP 867 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~--~~~ 867 (912)
.... ....+|+.|+|||.+.+..++. ++||||||+++|||++|+.||...... ......... ...
T Consensus 162 ~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~ 231 (271)
T 3kmu_A 162 SFQS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-----EIGMKVALEGLRPT 231 (271)
T ss_dssp TTSC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-----HHHHHHHHSCCCCC
T ss_pred eecc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-----HHHHHHHhcCCCCC
Confidence 4322 2346899999999988765544 799999999999999999998632111 111111111 111
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.+ ...+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 232 ~~----~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 232 IP----PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 11 1234568899999999999999999999999998753
No 136
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-40 Score=370.31 Aligned_cols=257 Identities=19% Similarity=0.294 Sum_probs=204.3
Q ss_pred HHHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 632 EIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 632 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
++....++|++.+.||+|+||+||+|+++ +++.||+|++....... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~-~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK-RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHH-TCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhh-hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 33445688999999999999999999986 68899999985311000 00123477899999999999999999999999
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
+..|+||||+++|+|.+++.. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccce
Confidence 999999999999999999854 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC-CccccccccccccccccccCC----CCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC-
Q 039137 791 AKFLNPDSS-NWSELAGTHGYVAPELAYTLK----VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS- 864 (912)
Q Consensus 791 a~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~- 864 (912)
++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ......+...
T Consensus 215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~ 289 (410)
T 3v8s_A 215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNHK 289 (410)
T ss_dssp CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTHH
T ss_pred eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----hhHHHHHHhcc
Confidence 987654322 233568999999999988765 78899999999999999999999852211 1111111111
Q ss_pred -CCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 039137 865 -RLPYPSLHVQKKLMSIMQVAFSCLDQNPES--RPTMKRVSQ 903 (912)
Q Consensus 865 -~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~ 903 (912)
...++.. ...+..+.++|.+|++.+|.+ ||+++|+++
T Consensus 290 ~~~~~p~~--~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 290 NSLTFPDD--NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHCCCCTT--CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccccCCCc--ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 1122211 123456889999999999988 999998875
No 137
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=8.4e-39 Score=345.48 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=209.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+++ +++.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccC-HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 467999999999999999999976 68899999986543332 2356778999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++.. ...+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 93 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 93 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EEECCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 9999999999998843 34689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
..........|++.|+|||.+.+..++.++||||+|+++|+|++|+.||+.... ..............+. .
T Consensus 167 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~----~ 237 (294)
T 2rku_A 167 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIKKNEYSIPK----H 237 (294)
T ss_dssp STTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTTCCCCCT----T
T ss_pred cCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhhccCCCcc----c
Confidence 554455566799999999999998899999999999999999999999863211 1111112222222222 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 238 INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 2345788999999999999999999876
No 138
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.3e-38 Score=352.41 Aligned_cols=262 Identities=23% Similarity=0.386 Sum_probs=211.6
Q ss_pred HHHHHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCch----HHHHHHHHHHHHHhhc-CCCccccE
Q 039137 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMS----FQQEEFLNEIQALTEI-RHRNIVKF 703 (912)
Q Consensus 630 ~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~----~~~~~~~~Ei~~l~~l-~h~niv~l 703 (912)
........++|++.+.||+|+||.||+|+++ +|+.||||++......... ...+.+.+|+.+++.+ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999986 7999999998765432221 1245688999999999 79999999
Q ss_pred EEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcE
Q 039137 704 YGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA 783 (912)
Q Consensus 704 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 783 (912)
++++...+..++||||+++++|.+++.. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~i 239 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQI 239 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCE
Confidence 9999999999999999999999999953 34689999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCCCcccccccccccccccccc------CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccc
Q 039137 784 HVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT------LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNM 857 (912)
Q Consensus 784 kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~ 857 (912)
||+|||++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ...
T Consensus 240 kl~DfG~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~~~ 313 (365)
T 2y7j_A 240 RLSDFGFSCHLEPG-EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-----ILM 313 (365)
T ss_dssp EECCCTTCEECCTT-CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH
T ss_pred EEEecCcccccCCC-cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence 99999999876543 33445679999999998863 3578899999999999999999999852111 111
Q ss_pred hhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 858 NIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 314 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 314 LRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1122223333332222234566889999999999999999998875
No 139
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.4e-38 Score=341.74 Aligned_cols=255 Identities=21% Similarity=0.325 Sum_probs=205.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc--hHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM--SFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
.++|++.+.||+|+||.||+|++. +++.||+|++........ ....+.+.+|+++++.++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 356999999999999999999986 789999999875433221 11367789999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC----cEEEeccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY----EAHVSDFG 789 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~Dfg 789 (912)
++||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999944 34689999999999999999999999 999999999999999877 79999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
.+....... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ..............+
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~ 231 (283)
T 3bhy_A 158 IAHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----QETLTNISAVNYDFD 231 (283)
T ss_dssp TCEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTTCCCCC
T ss_pred cceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----HHHHHHhHhcccCCc
Confidence 998765432 23455789999999999988999999999999999999999999853211 111111222222222
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred chhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 2222334566889999999999999999999986
No 140
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.1e-38 Score=351.13 Aligned_cols=259 Identities=22% Similarity=0.385 Sum_probs=208.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC--------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP--------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFC 707 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~ 707 (912)
.++|++.+.||+|+||.||+|++. ++..||+|++.... .....+.+.+|+++++.+ +||||+++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 110 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEE
Confidence 468999999999999999999863 56789999987542 223567789999999999 899999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccCC-------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCC
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKN 774 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 774 (912)
...+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+|
T Consensus 111 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 999999999999999999999965432 23489999999999999999999999 99999999999
Q ss_pred eEEcCCCcEEEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccc
Q 039137 775 VLLDLGYEAHVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMS 851 (912)
Q Consensus 775 ill~~~~~~kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~ 851 (912)
|+++.++.+||+|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-- 265 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-- 265 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred EEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH--
Confidence 9999999999999999987654322 1223456789999999988889999999999999999999 9999853211
Q ss_pred cccccchhhhccC-CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 852 SSSSNMNIEMLDS-RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 852 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.......... ....+ ...+..+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 266 ---~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 266 ---EELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp ---HHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0111111111 11111 1234568899999999999999999999999998763
No 141
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=348.74 Aligned_cols=258 Identities=21% Similarity=0.345 Sum_probs=198.3
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||+||+|++. +++.||+|++..... .....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--DPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--chHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 67999999999999999999986 689999999865432 233467788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 154 (311)
T 4agu_A 81 FEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154 (311)
T ss_dssp EECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccC
Confidence 999999999998843 34589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccc------c----------chh
Q 039137 797 DSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS------N----------MNI 859 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~------~----------~~~ 859 (912)
.........|++.|+|||++.+ ..++.++||||+|+++|+|++|+.||........... . ...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 5445556688999999999876 5689999999999999999999999863211100000 0 000
Q ss_pred hhccCCCCCCC------hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 860 EMLDSRLPYPS------LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 860 ~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+.+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000111110 011223456889999999999999999999875
No 142
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.7e-39 Score=355.87 Aligned_cols=265 Identities=21% Similarity=0.332 Sum_probs=212.2
Q ss_pred HHHHHhcCCCCCceeeecCceEEEEEEeC------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEE
Q 039137 632 EIISATNDFNAEHCIGKGGHGSVYRAKVP------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYG 705 (912)
Q Consensus 632 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~ 705 (912)
++....++|++.+.||+|+||.||+|++. +++.||+|++.... .......+.+|+.+++.++||||+++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---SMRERIEFLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---CHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---CHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence 33445678999999999999999999764 36789999987432 2224567899999999999999999999
Q ss_pred EEEcCCeeeEEEeecCCCChhhHhhccCC-------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc
Q 039137 706 FCSHPKHSFIIYEYLESGSLDKILCNDAS-------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778 (912)
Q Consensus 706 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 778 (912)
++...+..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~ 172 (322)
T 1p4o_A 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVA 172 (322)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEEC
T ss_pred EEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEc
Confidence 99999999999999999999999854321 24578999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccc
Q 039137 779 LGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSS 855 (912)
Q Consensus 779 ~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~ 855 (912)
.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .
T Consensus 173 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~ 247 (322)
T 1p4o_A 173 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----E 247 (322)
T ss_dssp TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----H
T ss_pred CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----H
Confidence 9999999999999865433211 223456889999999999899999999999999999999 8999853211 1
Q ss_pred cchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 856 NMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
............... ...+..+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 248 ~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 248 QVLRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 111111122211111 1234568899999999999999999999999998754
No 143
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.6e-38 Score=363.65 Aligned_cols=250 Identities=28% Similarity=0.409 Sum_probs=204.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC-eeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK-HSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~-~~~l 715 (912)
.++|++.+.||+|+||.||+|++ .++.||||+++... ..+.+.+|++++++++||||+++++++...+ ..++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 46788999999999999999988 47899999997542 3467899999999999999999999987765 7899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 265 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999996532 23478999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChhh
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLHV 873 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 873 (912)
.. .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... +.+.+
T Consensus 341 ~~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~~~~~~i~~~~~~~~p---- 408 (450)
T 1k9a_A 341 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAP---- 408 (450)
T ss_dssp ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----TTHHHHHHTTCCCCCC----
T ss_pred cc---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCC----
Confidence 22 223367889999999999999999999999999999998 9999863211 1111111111 22222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
...+..+.+++.+||+.||++|||+.++++.|++..
T Consensus 409 ~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~ 444 (450)
T 1k9a_A 409 DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444 (450)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 223456889999999999999999999999998764
No 144
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=6.8e-39 Score=355.91 Aligned_cols=252 Identities=25% Similarity=0.324 Sum_probs=194.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+.+ +++.||+|++...... .+.+.+|+.+++.++||||+++++++..++..++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 93 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAI 93 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEE
Confidence 468999999999999999999986 7899999999754322 3557899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc--EEEeccccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE--AHVSDFGIAKF 793 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~Dfgla~~ 793 (912)
||||+++|+|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++.
T Consensus 94 v~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~ 167 (361)
T 3uc3_A 94 IMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKS 167 (361)
T ss_dssp EEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred EEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence 9999999999999854 34689999999999999999999999 9999999999999987765 99999999975
Q ss_pred cCCCCCCccccccccccccccccccCCCCcc-hhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEK-CDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
.... .......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||......... ..............+..
T Consensus 168 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~- 244 (361)
T 3uc3_A 168 SVLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY-RKTIQRILSVKYSIPDD- 244 (361)
T ss_dssp --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH-HHHHHHHHTTCCCCCTT-
T ss_pred cccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH-HHHHHHHhcCCCCCCCc-
Confidence 4322 22345579999999999988887655 89999999999999999998632211110 11111122222222211
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+..+.++|.+||+.||++|||+.|+++
T Consensus 245 -~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 245 -IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp -SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred -CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 123456789999999999999999999875
No 145
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=365.97 Aligned_cols=320 Identities=22% Similarity=0.255 Sum_probs=188.5
Q ss_pred cEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCC
Q 039137 112 VYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSN 191 (912)
Q Consensus 112 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n 191 (912)
+.++.++++++ .+|..+. ++|++|||++|++++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 45777777777 4665553 47778888888877666677777777777777777777666666777777777777666
Q ss_pred cCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCc
Q 039137 192 FLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQ 271 (912)
Q Consensus 192 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 271 (912)
++++..+..|.++++|++|+|++|.+.+..|.. |..+++|++|+|++|++++..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~------------------------~~~l~~L~~L~l~~n~l~~~~~~ 146 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYM------------------------FQDLYNLKSLEVGDNDLVYISHR 146 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTT------------------------TTTCTTCCEEEECCTTCCEECTT
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhH------------------------ccccccCCEEECCCCccceeChh
Confidence 666444444555555555555555555444444 44444555555555555444444
Q ss_pred ccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCC
Q 039137 272 EIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQL 351 (912)
Q Consensus 272 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 351 (912)
.|.++++|++|+|++|++++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+..+.......+|
T Consensus 147 ~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L 226 (477)
T 2id5_A 147 AFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNL 226 (477)
T ss_dssp SSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCC
T ss_pred hccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccc
Confidence 55555555555555555554444455555566666666666555555556666666666666665555555444444455
Q ss_pred CEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCc
Q 039137 352 SLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSAN 431 (912)
Q Consensus 352 ~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 431 (912)
+.|++++|++++..+..+..+++|++|+|++|++++..+..+.++++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 227 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 227 TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 55555555555333344555555555555555555544455555555555555555555555555555555555555555
Q ss_pred ccCccccccccccccccEEEecccccc
Q 039137 432 NLSNFVPESLGSLVKLYYLNLSHNKLS 458 (912)
Q Consensus 432 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 458 (912)
+|+++.+..|..+++|+.|+|++|++.
T Consensus 307 ~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 307 QLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp CCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred cCceeCHhHcCCCcccCEEEccCCCcc
Confidence 555555555555555555555555554
No 146
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.6e-39 Score=368.78 Aligned_cols=255 Identities=23% Similarity=0.407 Sum_probs=208.5
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
..++|++.+.||+|+||+||+|+++++..||||++..... ..+.+.+|+.+++.++||||+++++++. .+..++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~l 259 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYI 259 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEE
Confidence 3567899999999999999999998889999999875321 3678999999999999999999999986 667899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ....+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 260 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 260 ITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp EECCCTTCBHHHHHHSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred EEeecCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 99999999999999543 223578999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhcc-CCCCCCChh
Q 039137 796 PDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLD-SRLPYPSLH 872 (912)
Q Consensus 796 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 872 (912)
.... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+.. .+.+.+
T Consensus 336 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~--- 407 (454)
T 1qcf_A 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIRALERGYRMPRP--- 407 (454)
T ss_dssp CHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHHHHHHTCCCCCC---
T ss_pred CCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCC---
Confidence 3211 1223346788999999998899999999999999999999 99998532111 11111111 122222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
...+..+.+++.+||+.||++|||++++++.|++.+
T Consensus 408 -~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 408 -ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 123456889999999999999999999999998765
No 147
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.5e-38 Score=357.94 Aligned_cols=252 Identities=22% Similarity=0.325 Sum_probs=193.6
Q ss_pred hcCCCCC-ceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEc----
Q 039137 637 TNDFNAE-HCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSH---- 709 (912)
Q Consensus 637 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~---- 709 (912)
.++|.+. +.||+|+||+||+|.++ +++.||||++.. ...+.+|++++.++ +||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~---------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc---------chhHHHHHHHHHHhcCCCCcceEeEEEeecccC
Confidence 3567766 68999999999999876 789999999852 23466888887554 89999999999875
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---CCcEEEe
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVS 786 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~ 786 (912)
.+..|+||||+++|+|.+++... ....+++.+++.|+.||+.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEE
Confidence 56789999999999999999543 234689999999999999999999999 9999999999999997 7889999
Q ss_pred ccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCC
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRL 866 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 866 (912)
|||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+.....
T Consensus 207 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~-~~~~~~i~~~~~ 284 (400)
T 1nxk_A 207 DFGFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQY 284 (400)
T ss_dssp CCTTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC-CSHHHHHHHTCC
T ss_pred ecccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc-HHHHHHHHcCcc
Confidence 99999866433 2334567899999999999999999999999999999999999998632221110 111122222233
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+.......+..+.++|.+||+.||++|||+.|+++
T Consensus 285 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 285 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3332222344567889999999999999999999986
No 148
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.7e-39 Score=350.66 Aligned_cols=255 Identities=23% Similarity=0.404 Sum_probs=200.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCE----EEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEI----FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
.++|++.+.||+|+||+||+|++. +++. ||+|.+..... ....+++.+|+.++++++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 90 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---PKANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccC---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 367999999999999999999865 4443 58888754322 124577899999999999999999999998754
Q ss_pred eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 712 HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
.++||||+++|+|.+++... ...+++.+++.|+.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a 164 (327)
T 3poz_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHH
T ss_pred -eEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcce
Confidence 78999999999999999553 35689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC--CC
Q 039137 792 KFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS--RL 866 (912)
Q Consensus 792 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~--~~ 866 (912)
+........ .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||+.... ......... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~~~~~~~~~~~~ 238 (327)
T 3poz_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SEISSILEKGERL 238 (327)
T ss_dssp HHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG------GGHHHHHHTTCCC
T ss_pred eEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH------HHHHHHHHcCCCC
Confidence 876544332 223456889999999999999999999999999999999 9999863211 111111111 12
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
+.+. ..+..+.+++.+||+.||++|||+.|+++.|++...
T Consensus 239 ~~~~----~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 239 PQPP----ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCCT----TBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred CCCc----cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 2221 234568899999999999999999999999988653
No 149
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.8e-39 Score=361.83 Aligned_cols=265 Identities=19% Similarity=0.257 Sum_probs=202.6
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCC------CCEEEEEEccCCCCCCch-------HHHHHHHHHHHHHhhcCCCcccc
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPS------GEIFAVKKFHSPLPGEMS-------FQQEEFLNEIQALTEIRHRNIVK 702 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~-------~~~~~~~~Ei~~l~~l~h~niv~ 702 (912)
..++|++.+.||+|+||+||+|.++. ++.||||++......... .....+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34689999999999999999998764 478999998654211000 01123445666778889999999
Q ss_pred EEEEEEcC----CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc
Q 039137 703 FYGFCSHP----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778 (912)
Q Consensus 703 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 778 (912)
+++++... ...++||||+ +++|.+++... ...+++.+++.|+.||+.||+|||++ +|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 99998764 4589999999 99999999543 35699999999999999999999999 999999999999999
Q ss_pred --CCCcEEEeccccccccCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhc
Q 039137 779 --LGYEAHVSDFGIAKFLNPDSSN-------WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFE 849 (912)
Q Consensus 779 --~~~~~kl~Dfgla~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~ 849 (912)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 187 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~ 266 (364)
T 3op5_A 187 YKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLK 266 (364)
T ss_dssp SSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred cCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 8899999999999876433211 1344599999999999999999999999999999999999999863211
Q ss_pred ccccccc-------chhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 850 MSSSSSN-------MNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 850 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
....... ......+...+. ...+..+.+++..||+.||++||+++++++.|++.+.+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~ 330 (364)
T 3op5_A 267 DPKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA 330 (364)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 1100000 000011100000 11245688999999999999999999999999988764
No 150
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2e-38 Score=356.81 Aligned_cols=256 Identities=19% Similarity=0.277 Sum_probs=203.0
Q ss_pred hcCCCCCceeeec--CceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 637 TNDFNAEHCIGKG--GHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
.++|++.+.||+| +||+||+|+++ +++.||||++...... ....+.+.+|+.+++.++||||+++++++..++..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 101 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS--NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNEL 101 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEE
Confidence 4679999999999 99999999986 7999999999754322 23567788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
++||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 102 WVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 99999999999999996532 34589999999999999999999999 999999999999999999999999998865
Q ss_pred cCCCC-------CCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC
Q 039137 794 LNPDS-------SNWSELAGTHGYVAPELAYT--LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS 864 (912)
Q Consensus 794 ~~~~~-------~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 864 (912)
..... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ .......
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-----~~~~~~~ 252 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-----LLEKLNG 252 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-----HHHC---
T ss_pred eccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-----HHHHhcC
Confidence 43211 11233478999999999987 5789999999999999999999999863211100 0000000
Q ss_pred CCC------------------------------------------CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 039137 865 RLP------------------------------------------YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVS 902 (912)
Q Consensus 865 ~~~------------------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 902 (912)
..+ .........+..+.+++.+||+.||++|||++|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell 332 (389)
T 3gni_B 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332 (389)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 000 00001122345688999999999999999999987
Q ss_pred H
Q 039137 903 Q 903 (912)
Q Consensus 903 ~ 903 (912)
+
T Consensus 333 ~ 333 (389)
T 3gni_B 333 N 333 (389)
T ss_dssp T
T ss_pred c
Confidence 4
No 151
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.7e-39 Score=349.81 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=212.3
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||+||+|.++ +++.||+|++.... ...+.+.+|+++++.++||||+++++++..++..+
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 4567999999999999999999986 58889999986432 14677899999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||||+++++|.+++... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 86 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 999999999999999553 335689999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCC--CCCCC
Q 039137 795 NPDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSR--LPYPS 870 (912)
Q Consensus 795 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~ 870 (912)
..... ......+++.|+|||++.+..++.++||||+|+++|+|++ |..||..... .......... ...+
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~------~~~~~~~~~~~~~~~~- 234 (288)
T 3kfa_A 162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEKDYRMERP- 234 (288)
T ss_dssp CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHTTCCCCCC-
T ss_pred cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HHHHHHHhccCCCCCC-
Confidence 54332 2233456788999999998899999999999999999999 9999853211 1111111111 1111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
...+..+.+++.+||+.||.+|||++|+++.|++.+.+
T Consensus 235 ---~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 235 ---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 12345688999999999999999999999999987653
No 152
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.5e-40 Score=356.37 Aligned_cols=259 Identities=25% Similarity=0.381 Sum_probs=189.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhh--cCCCccccEEEEEEcCC---
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE--IRHRNIVKFYGFCSHPK--- 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~~~--- 711 (912)
.++|++.+.||+|+||.||+|++ +++.||||++... ....+.+|.+++.. ++||||+++++++...+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 73 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T-------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSS
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc-------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcc
Confidence 46899999999999999999987 5899999998532 34567778888887 68999999999998776
Q ss_pred -eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeeecCCCCCCeEEcCCCc
Q 039137 712 -HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH--------NNCFPPIVHRDISSKNVLLDLGYE 782 (912)
Q Consensus 712 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill~~~~~ 782 (912)
..++||||+++|+|.+++.+ ..+++.+++.++.|++.|++||| ++ +|+||||||+||+++.++.
T Consensus 74 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~ 146 (303)
T 3gxj_A 74 TQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGT 146 (303)
T ss_dssp EEEEEEEECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCC
T ss_pred ceeEEEEeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCC
Confidence 78999999999999999944 35788999999999999999999 77 9999999999999999999
Q ss_pred EEEeccccccccCCCCCC----ccccccccccccccccccC------CCCcchhHHHHHHHHHHHHhC----------CC
Q 039137 783 AHVSDFGIAKFLNPDSSN----WSELAGTHGYVAPELAYTL------KVTEKCDVYSFGVLALEVIKG----------KH 842 (912)
Q Consensus 783 ~kl~Dfgla~~~~~~~~~----~~~~~g~~~y~aPE~~~~~------~~~~~sDvwslG~vl~elltg----------~~ 842 (912)
+||+|||++......... .....||+.|+|||++.+. .++.++|||||||++|||++| +.
T Consensus 147 ~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 147 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp C-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred EEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 999999999766544322 2334789999999998776 344689999999999999999 56
Q ss_pred CccchhccccccccchhhhccCCC--CCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 843 PRDFLFEMSSSSSNMNIEMLDSRL--PYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 843 pf~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
||...................... ..+. ......+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 227 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 654222211111222222222211 1111 1223556679999999999999999999999999987654
No 153
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=344.77 Aligned_cols=246 Identities=22% Similarity=0.262 Sum_probs=195.6
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeeeE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 715 (912)
++|++.+.||+|+||+||+|++. +++.||||++....... .......+|+..+..+ +||||+++++++.+++..++
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGP--KDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSH--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccCh--HHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 57999999999999999999987 79999999987554332 2344556666666666 89999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+ +++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 135 v~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~ 208 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELG 208 (311)
T ss_dssp EEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred EEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence 99999 56898888543 34699999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ........ .+......
T Consensus 209 ~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~--------~~~~~~~~--~~~~~~~~ 276 (311)
T 3p1a_A 209 TA-GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG--------WQQLRQGY--LPPEFTAG 276 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH--------HHHHTTTC--CCHHHHTT
T ss_pred cC-CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH--------HHHHhccC--CCcccccC
Confidence 43 23344568999999998876 689999999999999999999766431111 11111111 11112223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 277 ~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 277 LSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 4567889999999999999999999875
No 154
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.5e-39 Score=344.07 Aligned_cols=249 Identities=27% Similarity=0.432 Sum_probs=200.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLE-KAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccc-hhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 467999999999999999999876 6779999998532111 11124668899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ..+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.++|+|||++....
T Consensus 87 v~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 99999999999998443 4589999999999999999999999 99999999999999999999999999986543
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.. ......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... ..............+. .
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~----~ 229 (279)
T 3fdn_A 161 SS--RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYKRISRVEFTFPD----F 229 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHTCCCCCT----T
T ss_pred cc--cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHHHHHhCCCCCCC----c
Confidence 32 23456789999999999999999999999999999999999999862211 1111112222222222 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 230 VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 3345789999999999999999999986
No 155
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-38 Score=351.23 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=209.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|.+.+.||+|+||.||+|++. +++.||+|++....... ....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLK-PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 467999999999999999999876 68899999986543322 2356778999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 119 v~e~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 119 VLELCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp EECCCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEecCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 9999999999999844 34689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
..........|++.|+|||++.+..++.++||||||+++|||++|+.||..... ..............+. .
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~----~ 263 (335)
T 2owb_A 193 YDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIKKNEYSIPK----H 263 (335)
T ss_dssp STTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHTCCCCCT----T
T ss_pred cCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHhcCCCCCCc----c
Confidence 554455567799999999999998899999999999999999999999863211 1111112222222222 1
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 264 INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2345788999999999999999999875
No 156
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=365.24 Aligned_cols=319 Identities=22% Similarity=0.210 Sum_probs=216.0
Q ss_pred eeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeeccccc
Q 039137 161 VLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQ 240 (912)
Q Consensus 161 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 240 (912)
.++.+++.++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 15 AVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp EEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 3444444444 3443332 345555555555554445555666666666666666665556666666666666666666
Q ss_pred ccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcc
Q 039137 241 LSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320 (912)
Q Consensus 241 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 320 (912)
+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 171 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHH
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhH
Confidence 66555556777888888888888888777888888888888888888888777788888888888888888888777777
Q ss_pred cCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCcccccccccc
Q 039137 321 FGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLN 400 (912)
Q Consensus 321 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 400 (912)
|..+++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|++|+|++|++++..+..+.++++|+
T Consensus 172 l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 251 (477)
T 2id5_A 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLR 251 (477)
T ss_dssp HTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCC
T ss_pred hcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccC
Confidence 88888888888888888777777777777888888877777666666655555677777777766644334566666666
Q ss_pred EEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccc
Q 039137 401 RLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNF 480 (912)
Q Consensus 401 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 480 (912)
.|+|++|++++..+..|..+++|+.|+|++|+++++.|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+
T Consensus 252 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 331 (477)
T 2id5_A 252 FLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNP 331 (477)
T ss_dssp EEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSC
T ss_pred eeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCC
Confidence 66666666665555556666666666666666666556666666666666666666665555555566666666666666
Q ss_pred cC
Q 039137 481 LG 482 (912)
Q Consensus 481 l~ 482 (912)
+.
T Consensus 332 l~ 333 (477)
T 2id5_A 332 LA 333 (477)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 157
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.2e-39 Score=352.76 Aligned_cols=260 Identities=18% Similarity=0.260 Sum_probs=192.3
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
...++|++.+.||+|+||+||+|++. +++.||||++...... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE--EGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc--cccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 45678999999999999999999865 7899999999754322 22356678999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc-----CCCcEEEecc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD-----LGYEAHVSDF 788 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-----~~~~~kl~Df 788 (912)
++||||+++ +|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+||
T Consensus 109 ~lv~e~~~~-~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Df 181 (329)
T 3gbz_A 109 HLIFEYAEN-DLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181 (329)
T ss_dssp EEEEECCSE-EHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCT
T ss_pred EEEEecCCC-CHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcC
Confidence 999999985 999998543 4589999999999999999999999 999999999999994 4556999999
Q ss_pred ccccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhcccccccc-----------
Q 039137 789 GIAKFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN----------- 856 (912)
Q Consensus 789 gla~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~----------- 856 (912)
|+++.............+|+.|+|||++.+. .++.++||||+||++|||++|+.||............
T Consensus 182 g~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 261 (329)
T 3gbz_A 182 GLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261 (329)
T ss_dssp THHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred CCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhh
Confidence 9998776554555566789999999998875 4899999999999999999999998632111000000
Q ss_pred ----chhhhccCCCC---CCCh---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 857 ----MNIEMLDSRLP---YPSL---HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 857 ----~~~~~~~~~~~---~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..........+ .... .....+..+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 262 WPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp STTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00000000000 0000 00112356889999999999999999998875
No 158
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.1e-39 Score=350.70 Aligned_cols=255 Identities=25% Similarity=0.383 Sum_probs=201.4
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCE----EEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEI----FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
++|++.+.||+|+||+||+|++. +++. ||+|.+....... ..+.+.+|+.+++.++||||+++++++. .+.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~ 88 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQ---SFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSS 88 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCS---CBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSS
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHH---HHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCc
Confidence 57899999999999999999865 4544 7888875433221 2345678999999999999999999986 567
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred cEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccc
Confidence 89999999999999999543 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCC
Q 039137 793 FLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPY 868 (912)
Q Consensus 793 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 868 (912)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .......... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~ 238 (325)
T 3kex_A 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----AEVPDLLEKGERLAQ 238 (325)
T ss_dssp GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----THHHHHHHTTCBCCC
T ss_pred ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCC
Confidence 7754432 2345567889999999998999999999999999999999 9999863211 1111111111 1111
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
+. ..+..+.+++.+||+.||++|||++|+++.|++...
T Consensus 239 ~~----~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 239 PQ----ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp CT----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred CC----cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 11 123357789999999999999999999999988753
No 159
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.4e-38 Score=341.02 Aligned_cols=255 Identities=23% Similarity=0.407 Sum_probs=207.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
.++|++.+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|+++++.++||||+++++++. .+..++|
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v 85 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYII 85 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEE
Confidence 467999999999999999999988888999999865422 3567889999999999999999999986 4568999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 86 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EECCTTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 9999999999999432 223689999999999999999999999 999999999999999999999999999987654
Q ss_pred CCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChhh
Q 039137 797 DSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLHV 873 (912)
Q Consensus 797 ~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 873 (912)
... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .......... ....+
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~---- 232 (279)
T 1qpc_A 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-----PEVIQNLERGYRMVRP---- 232 (279)
T ss_dssp SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHHHTTCCCCCC----
T ss_pred cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-----HHHHHHHhcccCCCCc----
Confidence 321 1233456788999999988889999999999999999999 9999853211 0111111111 11111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
...+..+.+++.+||+.||++|||++++++.|++.+.
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 1234568899999999999999999999999998764
No 160
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.4e-38 Score=345.66 Aligned_cols=265 Identities=27% Similarity=0.390 Sum_probs=202.5
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc--CCCccccEEEEEEcC-
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI--RHRNIVKFYGFCSHP- 710 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~h~niv~l~~~~~~~- 710 (912)
....++|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT-------EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc-------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 345678999999999999999999984 899999998532 234455566666555 899999999999877
Q ss_pred ---CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----CCCeeecCCCCCCeEEcCCCc
Q 039137 711 ---KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC-----FPPIVHRDISSKNVLLDLGYE 782 (912)
Q Consensus 711 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~Nill~~~~~ 782 (912)
...++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||++. .++|+||||||+||+++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 678999999999999999944 35899999999999999999999762 238999999999999999999
Q ss_pred EEEeccccccccCCCCCC----ccccccccccccccccccCCCCcc------hhHHHHHHHHHHHHhC----------CC
Q 039137 783 AHVSDFGIAKFLNPDSSN----WSELAGTHGYVAPELAYTLKVTEK------CDVYSFGVLALEVIKG----------KH 842 (912)
Q Consensus 783 ~kl~Dfgla~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~------sDvwslG~vl~elltg----------~~ 842 (912)
+||+|||+++........ .....||+.|+|||++.+.....+ +|||||||++|||++| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 999999999866543322 124579999999999987766655 9999999999999999 55
Q ss_pred CccchhccccccccchhhhccC--CCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 843 PRDFLFEMSSSSSNMNIEMLDS--RLPYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 843 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
||.................... +...+. ......+..+.+++.+||+.||++|||+.|+++.|++...
T Consensus 261 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 261 PYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp TTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 5532211111111111111111 111121 1123566779999999999999999999999999998764
No 161
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.4e-39 Score=370.40 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=207.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+++ +|+.||+|++....... ....+.+.+|+.+++.++||||+++++++...+..|+
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~-~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK-RKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhh-hHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 367899999999999999999986 79999999985422111 1134678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCC-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 716 IYEYLESGSLDKILCNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
||||+++|+|.+++..... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~ 339 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeec
Confidence 9999999999999865432 44699999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 795 NPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
...........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ...............++.
T Consensus 340 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~~~~~~p~---- 414 (543)
T 3c4z_A 340 KAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLEQAVTYPD---- 414 (543)
T ss_dssp CTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHHCCCCCCT----
T ss_pred cCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhhcccCCCc----
Confidence 655444455689999999999999999999999999999999999999986321110 011122222333333332
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHH
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMK 899 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~ 899 (912)
..+..+.++|.+||+.||++||++.
T Consensus 415 ~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 415 KFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ccCHHHHHHHHHhccCCHhHCCCCc
Confidence 2345678999999999999999763
No 162
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.5e-38 Score=360.43 Aligned_cols=257 Identities=22% Similarity=0.288 Sum_probs=196.5
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCC----chHHHHHHHHHHHHHhhcCCCccccEEEEEEc
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGE----MSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH 709 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 709 (912)
...++|.+.+.||+|+||+||+|.++ +++.||||++....... .......+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999876 68999999986432111 11122357899999999999999999999864
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC---cEEEe
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY---EAHVS 786 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~ 786 (912)
+..++||||+++|+|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred -CceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 55799999999999999884 345689999999999999999999999 999999999999997544 59999
Q ss_pred ccccccccCCCCCCcccccccccccccccccc---CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhcc
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYT---LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLD 863 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 863 (912)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.... ...........
T Consensus 285 DFG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~i~~ 359 (419)
T 3i6u_A 285 DFGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQITS 359 (419)
T ss_dssp CSSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS----SSCCHHHHHHT
T ss_pred ecccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc----chHHHHHHHhc
Confidence 99999876533 33345679999999998853 567889999999999999999999985211 11112222233
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 864 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+......+..+.+++.+||+.||++|||++|+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 3333333333345667899999999999999999998875
No 163
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.6e-38 Score=347.20 Aligned_cols=257 Identities=19% Similarity=0.339 Sum_probs=199.9
Q ss_pred hcCCCCC-ceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 637 TNDFNAE-HCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 637 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
.++|++. +.||+|+||+||+|++. +++.||||++...... ..+.+.+|+++++++ +||||+++++++.+++..
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~ 86 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGH----IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRF 86 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSC----CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcch----hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 3568874 78999999999999865 7899999999754322 456788999999985 799999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc---EEEecccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVSDFGI 790 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~Dfgl 790 (912)
++||||+++|+|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~ 160 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDL 160 (316)
T ss_dssp EEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTC
T ss_pred EEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccC
Confidence 9999999999999999543 4689999999999999999999999 9999999999999998776 99999999
Q ss_pred ccccCCCC-------CCcccccccccccccccccc-----CCCCcchhHHHHHHHHHHHHhCCCCccchhccccc-----
Q 039137 791 AKFLNPDS-------SNWSELAGTHGYVAPELAYT-----LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS----- 853 (912)
Q Consensus 791 a~~~~~~~-------~~~~~~~g~~~y~aPE~~~~-----~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~----- 853 (912)
+....... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 240 (316)
T 2ac3_A 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240 (316)
T ss_dssp CC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----
T ss_pred ccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc
Confidence 98654221 11224468999999999875 45889999999999999999999998632211100
Q ss_pred -----cccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 854 -----SSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 854 -----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00111222233333333222334567889999999999999999999876
No 164
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7e-39 Score=370.74 Aligned_cols=255 Identities=25% Similarity=0.412 Sum_probs=210.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+++ ++..||||++..... ..+++.+|+.++++++||||+++++++...+..++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 457889999999999999999987 488999999875322 35779999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 294 v~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 294 ITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999653 235689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCC--CCCCCh
Q 039137 796 PDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSR--LPYPSL 871 (912)
Q Consensus 796 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 871 (912)
.... ......+++.|+|||++.+..++.++|||||||++|||++ |..||..... ......+... .+.+
T Consensus 370 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~------~~~~~~~~~~~~~~~~-- 441 (495)
T 1opk_A 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------SQVYELLEKDYRMERP-- 441 (495)
T ss_dssp TCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG------GGHHHHHHTTCCCCCC--
T ss_pred CCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH------HHHHHHHHcCCCCCCC--
Confidence 3321 1223445788999999998889999999999999999999 9999853211 1111111111 1222
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
...+..+.+++.+||+.||++|||+.++++.|+..+.
T Consensus 442 --~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 442 --EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred --CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1234568899999999999999999999999987653
No 165
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=351.19 Aligned_cols=247 Identities=21% Similarity=0.293 Sum_probs=204.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc----hHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM----SFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
..++|++.+.||+|+||+||+|++. +++.||||++........ ....+.+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 4578999999999999999999865 788999999876543221 11234567899999999999999999999999
Q ss_pred CeeeEEEeecCCC-ChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 711 KHSFIIYEYLESG-SLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 711 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
+..++||||+.+| +|.+++.. ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDR---HPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHT---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 99999843 34689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPY 868 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 868 (912)
+++..... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....+. .......
T Consensus 176 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----------~~~~~~~ 243 (335)
T 3dls_A 176 SAAYLERG-KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-----------VEAAIHP 243 (335)
T ss_dssp TCEECCTT-CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-----------TTTCCCC
T ss_pred cceECCCC-CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-----------HhhccCC
Confidence 99876543 23345679999999999988876 78999999999999999999998632111 1111111
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 904 (912)
+. ..+..+.+++.+||+.||++|||++|+++.
T Consensus 244 ~~----~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 PY----LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred Cc----ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 123458899999999999999999998863
No 166
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-38 Score=341.86 Aligned_cols=253 Identities=25% Similarity=0.361 Sum_probs=197.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|.+.+.||+|+||+||+|+.. +++.||+|++....... ..+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch---hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 357999999999999999999875 68899999987543222 35778899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccC-CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEeccccc
Q 039137 716 IYEYLESGSLDKILCNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIA 791 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla 791 (912)
||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 999999999999885432 235689999999999999999999999 99999999999999 45678999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
...... .......|++.|+|||++. ..++.++||||+|+++|||++|+.||...... ...............
T Consensus 175 ~~~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~~~~~~~~~~~~~~~- 246 (285)
T 3is5_A 175 ELFKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----EVQQKATYKEPNYAV- 246 (285)
T ss_dssp CC-----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHCCCCCCC-
T ss_pred eecCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----HHHhhhccCCccccc-
Confidence 866443 2334567899999999876 46899999999999999999999998632110 000011111111110
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp --CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11112356789999999999999999999875
No 167
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.3e-38 Score=368.85 Aligned_cols=253 Identities=25% Similarity=0.393 Sum_probs=210.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+.+ +++.||||++........ ...+.+.+|+++++.++||||+++++++...+..++
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQK-TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBS-SCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 457999999999999999999986 799999999865543222 246778999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEecccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIAK 792 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla~ 792 (912)
||||+.+|+|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 104 v~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS---RKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EECCCCSCBHHHHHHT---CSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 9999999999998844 34689999999999999999999999 99999999999999 567899999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|++||..... ......+.......+...
T Consensus 178 ~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~ 250 (484)
T 3nyv_A 178 HFEAS-KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-----YDILKKVEKGKYTFELPQ 250 (484)
T ss_dssp HBCCC-CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCCCSGG
T ss_pred Ecccc-cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCCCCCCCcc
Confidence 76543 33455679999999999876 699999999999999999999999863211 112222333333333334
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+.++|.+||+.||.+|||+.|+++
T Consensus 251 ~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 251 WKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 4455677899999999999999999999875
No 168
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=339.00 Aligned_cols=256 Identities=24% Similarity=0.355 Sum_probs=207.4
Q ss_pred cCCCCCc-eeeecCceEEEEEEeC---CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 638 NDFNAEH-CIGKGGHGSVYRAKVP---SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 638 ~~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
++|.+.+ .||+|+||.||+|.+. ++..||+|++.... .....+.+.+|+++++.++||||+++++++ ..+..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~ 84 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEAL 84 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCc
Confidence 4566666 9999999999999854 67789999997542 233567899999999999999999999999 45678
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
++||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~ 159 (287)
T 1u59_A 85 MLVMEMAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKA 159 (287)
T ss_dssp EEEEECCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceee
Confidence 999999999999999843 235689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCC
Q 039137 794 LNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPY 868 (912)
Q Consensus 794 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 868 (912)
....... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .......... ....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~i~~~~~~~~ 234 (287)
T 1u59_A 160 LGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMEC 234 (287)
T ss_dssp CTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT-----HHHHHHHHTTCCCCC
T ss_pred eccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHhcCCcCCC
Confidence 7543322 223456889999999988889999999999999999998 9999853211 1111111111 1122
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
+ ...+..+.+++.+||+.||++||++.++++.|++.+.+
T Consensus 235 ~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 235 P----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp C----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C----CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 2 12345688999999999999999999999999998764
No 169
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.1e-38 Score=349.74 Aligned_cols=264 Identities=21% Similarity=0.337 Sum_probs=208.2
Q ss_pred ccHHHHHHHhcCCCCC-ceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEE
Q 039137 628 IVYEEIISATNDFNAE-HCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFY 704 (912)
Q Consensus 628 ~~~~e~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~ 704 (912)
+.+.......++|.+. +.||+|+||.||+|..+ +++.||+|++........ ....+.+|+.+++.++ ||||++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD--CRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEE--CHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchH--HHHHHHHHHHHHHhccCCCCEEEEE
Confidence 3334445566778887 89999999999999876 689999999876443322 4577889999999995 79999999
Q ss_pred EEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---CC
Q 039137 705 GFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL---GY 781 (912)
Q Consensus 705 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~ 781 (912)
+++...+..++||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCC
Confidence 9999999999999999999999998432 345689999999999999999999999 9999999999999998 78
Q ss_pred cEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 782 EAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 782 ~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
.+||+|||+++..... .......|++.|+|||++.+..++.++||||||+++|||++|+.||..... .......
T Consensus 172 ~~kL~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i 245 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHA-CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN-----QETYLNI 245 (327)
T ss_dssp CEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH
T ss_pred cEEEeeCccccccCCc-cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHH
Confidence 9999999999876543 223456799999999999999999999999999999999999999852211 1111112
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 862 LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 246 SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 222222222222334566889999999999999999999864
No 170
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.3e-38 Score=347.92 Aligned_cols=260 Identities=24% Similarity=0.340 Sum_probs=206.3
Q ss_pred CCCCceeeecCceEEEEEEeC-----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC--Ce
Q 039137 640 FNAEHCIGKGGHGSVYRAKVP-----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP--KH 712 (912)
Q Consensus 640 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~--~~ 712 (912)
|++.+.||+|+||+||+|.++ +++.||||++.... .....+.+.+|+++++.++||||+++++++.+. ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 489999999999999988642 68899999997542 223567799999999999999999999999874 67
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++.. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp EEEEECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccc
Confidence 8999999999999999944 2489999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc----c-----cccchhh
Q 039137 793 FLNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS----S-----SSNMNIE 860 (912)
Q Consensus 793 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~----~-----~~~~~~~ 860 (912)
........ .....+++.|+|||++.+..++.++||||+|+++|||++|..||........ . .......
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (318)
T 3lxp_A 183 AVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTE 262 (318)
T ss_dssp ECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHH
Confidence 77544321 2345678889999999998899999999999999999999999863221100 0 0000111
Q ss_pred hccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 861 MLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
........+. ....+..+.+++.+||+.||++|||++|+++.|++...+
T Consensus 263 ~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 311 (318)
T 3lxp_A 263 LLERGERLPR--PDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311 (318)
T ss_dssp HHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhcccCCCC--CccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHh
Confidence 1111111110 122345688999999999999999999999999987643
No 171
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.9e-38 Score=344.38 Aligned_cols=251 Identities=25% Similarity=0.364 Sum_probs=204.2
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|.+.+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|+++++.++||||+++++++...+..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF----RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYY 82 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc----chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEE
Confidence 3467999999999999999999876 7999999998754322 3456889999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla 791 (912)
+||||+++++|.+++.. .+.+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 83 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~ 156 (304)
T 2jam_A 83 LVMQLVSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLS 156 (304)
T ss_dssp EEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTT
T ss_pred EEEEcCCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcc
Confidence 99999999999999844 34689999999999999999999999 99999999999999 78889999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
..... .......|++.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+.......+..
T Consensus 157 ~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~ 229 (304)
T 2jam_A 157 KMEQN--GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-----SKLFEKIKEGYYEFESP 229 (304)
T ss_dssp CCCCC--BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHCCCCCCTT
T ss_pred eecCC--CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCCCCCCcc
Confidence 75432 223445689999999999999999999999999999999999999852211 11111222222222222
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 FWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 22334566889999999999999999999875
No 172
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=340.38 Aligned_cols=253 Identities=25% Similarity=0.341 Sum_probs=199.5
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|.....||+|+||.||+|++. +++.||+|++..... ...+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 97 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS----RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 97 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC-------HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch----HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEE
Confidence 34555669999999999999875 788999999875422 2456788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC-CCcEEEeccccccccC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL-GYEAHVSDFGIAKFLN 795 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfgla~~~~ 795 (912)
|||+++++|.+++........+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||.+....
T Consensus 98 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~ 174 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA 174 (295)
T ss_dssp EECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred EEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence 99999999999997654455678999999999999999999999 9999999999999987 8999999999998765
Q ss_pred CCCCCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLK--VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
..........|++.|+|||++.+.. ++.++||||||+++|+|++|+.||......... .............+
T Consensus 175 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~---- 248 (295)
T 2clq_A 175 GINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA--MFKVGMFKVHPEIP---- 248 (295)
T ss_dssp C-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH--HHHHHHHCCCCCCC----
T ss_pred CCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH--HHhhcccccccccc----
Confidence 5444445567899999999987653 789999999999999999999998532111000 00000111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+..+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 249 ESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 123456789999999999999999998864
No 173
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=2.4e-38 Score=345.17 Aligned_cols=263 Identities=24% Similarity=0.373 Sum_probs=201.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
..++|.+.+.||+|+||.||+|+.. +++.||+|++...... ....+.+.+|+.+++.++||||+++++++...+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSS--QREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCC--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccc--hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 4567899999999999999999764 3457999998754322 234577899999999999999999999997755
Q ss_pred -----eeeEEEeecCCCChhhHhhcc---CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcE
Q 039137 712 -----HSFIIYEYLESGSLDKILCND---ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEA 783 (912)
Q Consensus 712 -----~~~lv~e~~~~g~L~~~l~~~---~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 783 (912)
..++||||+++|+|.+++... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 359999999999999998433 2345699999999999999999999999 99999999999999999999
Q ss_pred EEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhh
Q 039137 784 HVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIE 860 (912)
Q Consensus 784 kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 860 (912)
||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||..... ......
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~ 261 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----HEMYDY 261 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHH
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----HHHHHH
Confidence 9999999986644321 1233457889999999999999999999999999999999 8899853211 111111
Q ss_pred hccCC-CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhcC
Q 039137 861 MLDSR-LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFEV 912 (912)
Q Consensus 861 ~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~~ 912 (912)
..... ...+ ...+..+.+++.+||+.||++|||++++++.|++.+.++
T Consensus 262 ~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 262 LLHGHRLKQP----EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HHTTCCCCCB----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHcCCCCCCC----ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11111 1111 223456889999999999999999999999999987653
No 174
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.1e-38 Score=365.10 Aligned_cols=256 Identities=26% Similarity=0.435 Sum_probs=204.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
..++|++.+.||+|+||+||+|+++.+..||||++..... ..+++.+|++++++++||||+++++++.. +..++
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~i 255 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 255 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEE
Confidence 3467889999999999999999998888899999875432 35678999999999999999999999876 77899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 256 v~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 256 VTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EECCCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EehhhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 99999999999999532 234589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChh
Q 039137 796 PDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLH 872 (912)
Q Consensus 796 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 872 (912)
.... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... +.+.+.
T Consensus 332 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i~~~~~~~~~~-- 404 (452)
T 1fmk_A 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQVERGYRMPCPP-- 404 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCCT--
T ss_pred CCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCCC--
Confidence 4322 1233456789999999998899999999999999999999 99998532110 111111111 222221
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.+++.+||+.||++|||++++++.|++.+.
T Consensus 405 --~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 405 --ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred --CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 234568899999999999999999999999988653
No 175
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.7e-38 Score=346.81 Aligned_cols=265 Identities=25% Similarity=0.364 Sum_probs=209.0
Q ss_pred HHHHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhh--cCCCccccEEEEEEc
Q 039137 632 EIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTE--IRHRNIVKFYGFCSH 709 (912)
Q Consensus 632 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~--l~h~niv~l~~~~~~ 709 (912)
......++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|+++++. ++||||+++++++..
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~ 107 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-------EERSWFREAEIYQTVMLRHENILGFIAADNK 107 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence 3345567899999999999999999998 6899999998532 34567789998887 689999999999988
Q ss_pred CC----eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHH--------hCCCCCeeecCCCCCCeEE
Q 039137 710 PK----HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLH--------NNCFPPIVHRDISSKNVLL 777 (912)
Q Consensus 710 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~Nill 777 (912)
.+ ..++||||+++|+|.+++.. ..+++.+++.++.|++.||+||| ++ +|+||||||+||++
T Consensus 108 ~~~~~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll 180 (342)
T 1b6c_B 108 DNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILV 180 (342)
T ss_dssp CCSSCCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEE
T ss_pred cCCccceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEE
Confidence 76 78999999999999999954 35899999999999999999999 77 99999999999999
Q ss_pred cCCCcEEEeccccccccCCCCCC----ccccccccccccccccccCC------CCcchhHHHHHHHHHHHHhC-------
Q 039137 778 DLGYEAHVSDFGIAKFLNPDSSN----WSELAGTHGYVAPELAYTLK------VTEKCDVYSFGVLALEVIKG------- 840 (912)
Q Consensus 778 ~~~~~~kl~Dfgla~~~~~~~~~----~~~~~g~~~y~aPE~~~~~~------~~~~sDvwslG~vl~elltg------- 840 (912)
+.++.+||+|||++......... .....|++.|+|||++.+.. ++.++||||||+++|||++|
T Consensus 181 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 181 KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999999999876544321 24457899999999987652 34689999999999999999
Q ss_pred ---CCCccchhccccccccchhhhccCCC--CCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 841 ---KHPRDFLFEMSSSSSNMNIEMLDSRL--PYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 841 ---~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
+.||...................... ..+. .........+.+++.+||+.||++|||+.|+++.|++...+
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 67765322111111111111111111 1111 11234566789999999999999999999999999987654
No 176
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.4e-38 Score=344.08 Aligned_cols=263 Identities=17% Similarity=0.261 Sum_probs=202.5
Q ss_pred HHhcCCCCCceeeecCceEEEEEEe-CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEE-EcCCe
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFC-SHPKH 712 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~ 712 (912)
...++|++.+.||+|+||+||+|++ .+++.||+|++..... .+.+.+|+++++.++|++++..++++ ...+.
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDY 79 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHHHHHHHHHHHhcCCCCCCeeeeecCCCCc
Confidence 3457899999999999999999987 4789999998754332 23467899999999988777666655 66778
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEeccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFG 789 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfg 789 (912)
.++||||+ +++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 80 NVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred eEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 89999999 88999998532 34689999999999999999999999 99999999999999 788999999999
Q ss_pred cccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 790 IAKFLNPDSS-------NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 790 la~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
+++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .......
T Consensus 154 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~ 231 (296)
T 4hgt_A 154 LAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QKYERIS 231 (296)
T ss_dssp TCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SHHHHHH
T ss_pred cceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh--hhhhhhh
Confidence 9987654432 223567899999999999999999999999999999999999998632221111 1111111
Q ss_pred cCCCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 863 DSRLPYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 863 ~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
......+. ......+..+.+++.+||+.||++|||++++++.|++.+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 11111110 00112245688999999999999999999999999987653
No 177
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.3e-38 Score=352.59 Aligned_cols=199 Identities=26% Similarity=0.322 Sum_probs=175.2
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-----CCccccEEEEE
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-----HRNIVKFYGFC 707 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----h~niv~l~~~~ 707 (912)
....++|++.+.||+|+||+||+|++. +++.||||++... ....+.+.+|+++++.++ ||||+++++++
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~ 105 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF 105 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----hhhhhhhHHHHHHHHHhcccCCCCCCeeccccee
Confidence 344678999999999999999999875 7899999998632 224566788999999996 99999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC--------
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL-------- 779 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-------- 779 (912)
...+..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.
T Consensus 106 ~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 106 MYYDHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EETTEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEE
T ss_pred eECCeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccccccccc
Confidence 9999999999999 889999995533 34589999999999999999999999 9999999999999975
Q ss_pred -----------------CCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCC
Q 039137 780 -----------------GYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKH 842 (912)
Q Consensus 780 -----------------~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~ 842 (912)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~ 257 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCC
Confidence 788999999999865432 235678999999999999999999999999999999999999
Q ss_pred Ccc
Q 039137 843 PRD 845 (912)
Q Consensus 843 pf~ 845 (912)
||.
T Consensus 258 pf~ 260 (360)
T 3llt_A 258 LFR 260 (360)
T ss_dssp SCC
T ss_pred CCC
Confidence 985
No 178
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=357.08 Aligned_cols=264 Identities=20% Similarity=0.259 Sum_probs=199.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCch-------HHHHHHHHHHHHHhhcCCCccccEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMS-------FQQEEFLNEIQALTEIRHRNIVKFYG 705 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~-------~~~~~~~~Ei~~l~~l~h~niv~l~~ 705 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++......... ...+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367999999999999999999875 5788999998754321100 01234678889999999999999999
Q ss_pred EEEc----CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC
Q 039137 706 FCSH----PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY 781 (912)
Q Consensus 706 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 781 (912)
++.. ....++||||+ +++|.+++... +.+++.+++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 9987 67899999999 99999999443 3799999999999999999999999 999999999999999887
Q ss_pred --cEEEeccccccccCCCC-------CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc
Q 039137 782 --EAHVSDFGIAKFLNPDS-------SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS 852 (912)
Q Consensus 782 --~~kl~Dfgla~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~ 852 (912)
.+||+|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 189 ~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~ 268 (345)
T 2v62_A 189 PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPV 268 (345)
T ss_dssp TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHH
T ss_pred CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccH
Confidence 99999999998764321 112455789999999999999999999999999999999999999852111100
Q ss_pred ccccchhhhccCCCCCCChhhH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 853 SSSNMNIEMLDSRLPYPSLHVQ-----KKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
........ ..... +..... ..+..+.+++.+||+.||++|||++++++.|++.-+
T Consensus 269 ~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 269 AVQTAKTN-LLDEL--PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHH-HHHTT--THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHHh-hcccc--cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 00000000 00111 100000 234568899999999999999999999999987543
No 179
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=350.66 Aligned_cols=250 Identities=22% Similarity=0.382 Sum_probs=196.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCC--CccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH--RNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.+++.++| |||+++++++..++..+
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 85 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEE
Confidence 457999999999999999999998999999999875432 23345778999999999976 99999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||| +.+++|.+++.. ...+++.++..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++..
T Consensus 86 lv~e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~ 157 (343)
T 3dbq_A 86 MVME-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQM 157 (343)
T ss_dssp EEEC-CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred EEEe-CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence 9999 567899999954 34689999999999999999999999 999999999999997 578999999999876
Q ss_pred CCCCC--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 795 NPDSS--NWSELAGTHGYVAPELAYT-----------LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 795 ~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~ 233 (343)
T 3dbq_A 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----ISKLHAI 233 (343)
T ss_dssp ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----HHHHHHH
T ss_pred CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH----HHHHHHH
Confidence 54332 2335679999999999865 66889999999999999999999998632111 0111111
Q ss_pred ccCC--CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 039137 862 LDSR--LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQL 904 (912)
Q Consensus 862 ~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 904 (912)
.+.. ...+.. .+..+.+++.+||+.||.+|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~----~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 234 IDPNHEIEFPDI----PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HCTTSCCCCCCC----SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hcCCcccCCccc----CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111 112211 12457899999999999999999998753
No 180
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.6e-39 Score=367.83 Aligned_cols=261 Identities=20% Similarity=0.274 Sum_probs=205.1
Q ss_pred HHHHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc
Q 039137 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH 709 (912)
Q Consensus 631 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 709 (912)
.++....++|++.+.||+|+||+||+|+++ +++.||+|++....... ....+.+.+|..++..++||||+++++++.+
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK-RAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhh-HHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344445689999999999999999999987 57899999985321000 0012337889999999999999999999999
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
++..|+||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 99999999999999999999542 35689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC-ccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhcc
Q 039137 790 IAKFLNPDSSN-WSELAGTHGYVAPELAY-----TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLD 863 (912)
Q Consensus 790 la~~~~~~~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~ 863 (912)
+|+........ .....||+.|+|||++. ...++.++||||+||++|||++|+.||...... .....+..
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-----~~~~~i~~ 295 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMN 295 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHHHHT
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-----HHHHhhhh
Confidence 99876544332 23467999999999987 456899999999999999999999998622111 11111111
Q ss_pred --CCCCCCChhhHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 039137 864 --SRLPYPSLHVQKKLMSIMQVAFSCLDQNPES--RPTMKRVSQ 903 (912)
Q Consensus 864 --~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~ 903 (912)
....++.. ....+..+.++|.+|+..+|++ ||+++|+++
T Consensus 296 ~~~~~~~p~~-~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 296 HKERFQFPTQ-VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHHHCCCCSS-CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred ccccccCCcc-cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 11222211 1123456789999999988888 999998764
No 181
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=353.97 Aligned_cols=258 Identities=23% Similarity=0.360 Sum_probs=195.3
Q ss_pred cCCCCCceeeecCceEEEEEEeC--C--CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc-CCe
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP--S--GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH-PKH 712 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~-~~~ 712 (912)
..|++.+.||+|+||+||+|++. + +..||+|.+.... .....+++.+|+.++++++||||+++++++.. .+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 165 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 165 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSC
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCC
Confidence 34677889999999999999864 2 2368999886432 22356789999999999999999999999754 567
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~ 240 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLAR 240 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----
T ss_pred eEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccc
Confidence 89999999999999999542 34578999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC----CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCCC
Q 039137 793 FLNPDSS----NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRLP 867 (912)
Q Consensus 793 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 867 (912)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |.+||..... .............
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~-----~~~~~~~~~~~~~ 315 (373)
T 3c1x_A 241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-----FDITVYLLQGRRL 315 (373)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS-----SCHHHHHHTTCCC
T ss_pred cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH-----HHHHHHHHcCCCC
Confidence 6643321 1233456789999999999999999999999999999999 6777652211 1111112222211
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..+ ...+..+.+++.+||+.||++|||++|+++.|++.+..
T Consensus 316 ~~p---~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 316 LQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp CCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 111 12345688999999999999999999999999987653
No 182
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.9e-38 Score=367.35 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=206.6
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||+||+|+++ +++.||||++....... ...+.+.+|+++++.++||||+++++++...+..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 97 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEE
Confidence 3467999999999999999999876 78999999985432111 13567889999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc---CCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD---LGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~Dfgla 791 (912)
+||||+++|+|.+.+... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 171 (486)
T 3mwu_A 98 IVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (486)
T ss_dssp EEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence 999999999999988443 4689999999999999999999999 999999999999995 4567999999999
Q ss_pred cccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCCh
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSL 871 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (912)
+..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+.......+..
T Consensus 172 ~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~ 244 (486)
T 3mwu_A 172 TCFQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILKRVETGKYAFDLP 244 (486)
T ss_dssp TTBCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCCCSCSG
T ss_pred eECCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCCCCCc
Confidence 876543 33445679999999999876 599999999999999999999999852211 11222233333333333
Q ss_pred hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 872 HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 872 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+..+.++|.+||+.||.+|||+.|+++
T Consensus 245 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 245 QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp GGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 44455677889999999999999999999886
No 183
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=350.06 Aligned_cols=264 Identities=21% Similarity=0.276 Sum_probs=197.6
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCch-HHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMS-FQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
....++|++.+.||+|+||.||+|++. +|+.||+|++......... ...+.+.+|+++++.++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 344678999999999999999999976 6899999998754322211 12346789999999999999999999999999
Q ss_pred eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 712 HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
..++||||+++ +|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLA 159 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGG
T ss_pred ceEEEEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccc
Confidence 99999999986 88888843 234688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhccccccc------cchhhhc--
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS------NMNIEML-- 862 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~------~~~~~~~-- 862 (912)
+.............+|+.|+|||++.+. .++.++|||||||++|||++|.+||........... ......+
T Consensus 160 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 160 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp STTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred eeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence 8776555555667899999999998764 488999999999999999999999853211100000 0000000
Q ss_pred ---------cCCCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 ---------DSRLPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ---------~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+ ......+..+.++|.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 00000000 001223456889999999999999999999875
No 184
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=344.84 Aligned_cols=262 Identities=25% Similarity=0.335 Sum_probs=197.9
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCC-chHHHHHHHHHHHHHhhcC---CCccccEEEEEEcC
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGE-MSFQQEEFLNEIQALTEIR---HRNIVKFYGFCSHP 710 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~~~~ 710 (912)
..++|++.+.||+|+||+||+|++. +++.||+|++....... .......+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999974 78999999986433211 1112345667888777774 99999999999775
Q ss_pred C-----eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEE
Q 039137 711 K-----HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHV 785 (912)
Q Consensus 711 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 785 (912)
. ..++||||++ ++|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 5 5799999997 59999985433 34489999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccc--------
Q 039137 786 SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNM-------- 857 (912)
Q Consensus 786 ~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~-------- 857 (912)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.............
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999876433 33455678999999999999999999999999999999999999985321110000000
Q ss_pred ---------hhhhccCCCCCC-ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 858 ---------NIEMLDSRLPYP-SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 858 ---------~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.........+.+ .......+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 000000000000 0011123456889999999999999999998875
No 185
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.8e-38 Score=361.01 Aligned_cols=255 Identities=19% Similarity=0.273 Sum_probs=195.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP----- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 710 (912)
.++|++.+.||+|+||+||+|.+. +++.||||++..... .....+++.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGG--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcccc--ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCcccc
Confidence 468999999999999999999875 789999999975422 233567788999999999999999999999655
Q ss_pred -CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 711 -KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 711 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
...|+||||++++ +.+.+. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~~-l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDAN-LCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSEE-HHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCCC-HHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 3569999999874 655552 2488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccc----------------
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS---------------- 853 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~---------------- 853 (912)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.........
T Consensus 210 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 210 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp CC-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred eeeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99876543 3345578999999999999999999999999999999999999999632110000
Q ss_pred -cccchhhhccCC----------------CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 854 -SSNMNIEMLDSR----------------LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 854 -~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
............ .+.........+..+.+++.+||+.||++|||++|+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000001111 11112222333667899999999999999999998875
No 186
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-38 Score=342.59 Aligned_cols=261 Identities=17% Similarity=0.263 Sum_probs=205.8
Q ss_pred hcCCCCCceeeecCceEEEEEEe-CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEE-EcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFC-SHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~-~~~~~~~ 714 (912)
.++|++.+.||+|+||.||+|++ .+++.||+|++..... .+++.+|+.+++.++|++++..++++ ...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHHHHHHHHHHHhhcCCCCCccccccCCCCceE
Confidence 46899999999999999999997 4899999999865432 23577999999999988766666555 6677889
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla 791 (912)
+||||+ +++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~ 155 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence 999999 88999999532 34689999999999999999999999 99999999999999 48889999999999
Q ss_pred cccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC
Q 039137 792 KFLNPDSS-------NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS 864 (912)
Q Consensus 792 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 864 (912)
........ ......|++.|+|||++.+..++.++||||||+++|||++|+.||......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~ 233 (296)
T 3uzp_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR--QKYERISEK 233 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS--SHHHHHHHH
T ss_pred ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhh--hhhhhhccc
Confidence 87655432 124567899999999999999999999999999999999999998632211111 111111111
Q ss_pred CCCCCC-hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 865 RLPYPS-LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 865 ~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
....+. ......+..+.+++.+||+.||++|||++++++.|++.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 281 (296)
T 3uzp_A 234 KMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp HHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence 111110 01112345688999999999999999999999999988754
No 187
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.2e-38 Score=350.96 Aligned_cols=251 Identities=15% Similarity=0.149 Sum_probs=203.3
Q ss_pred hcCCCCCceeeecCceEEEEEE------eCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC---CCccccEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAK------VPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR---HRNIVKFYGFC 707 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~ 707 (912)
.++|.+.+.||+|+||+||+|. ..+++.||+|++... ...++.+|+++++.++ |+||+++++++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-------~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~ 136 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-------NPWEFYIGTQLMERLKPSMQHMFMKFYSAH 136 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-------CHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-------ChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence 4679999999999999999994 347889999998643 2456778888888886 99999999999
Q ss_pred EcCCeeeEEEeecCCCChhhHhhccC--CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC------
Q 039137 708 SHPKHSFIIYEYLESGSLDKILCNDA--SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL------ 779 (912)
Q Consensus 708 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~------ 779 (912)
...+..++||||+++|+|.+++.... ....+++.+++.|+.||+.||+|||++ +|+||||||+||+++.
T Consensus 137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~ 213 (365)
T 3e7e_A 137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQD 213 (365)
T ss_dssp ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC-
T ss_pred ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcc
Confidence 99999999999999999999995432 345699999999999999999999999 9999999999999998
Q ss_pred -----CCcEEEeccccccccCC--CCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc
Q 039137 780 -----GYEAHVSDFGIAKFLNP--DSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS 852 (912)
Q Consensus 780 -----~~~~kl~Dfgla~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~ 852 (912)
++.+||+|||+|+.+.. .........||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 214 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~- 292 (365)
T 3e7e_A 214 DEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE- 292 (365)
T ss_dssp -----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-
T ss_pred ccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc-
Confidence 89999999999976542 2233455679999999999999999999999999999999999999985221100
Q ss_pred ccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHHHHhhh
Q 039137 853 SSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESR-PTMKRVSQLLCEKIF 910 (912)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~~l~ 910 (912)
. ......... .....+.+++..|++.+|.+| |+++++.+.|++.+.
T Consensus 293 ----~---~~~~~~~~~-----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 293 ----C---KPEGLFRRL-----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp ----E---EECSCCTTC-----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred ----e---eechhcccc-----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 0 011111111 113346688889999999998 688888888887664
No 188
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=347.05 Aligned_cols=255 Identities=23% Similarity=0.394 Sum_probs=199.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCE----EEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEI----FAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
.++|++.+.||+|+||+||+|++. +++. ||+|.+...... ...+.+.+|+.+++.++||||+++++++..+.
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP---KANKEILDEAYVMASVDNPHVCRLLGICLTST 90 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSC---CCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCH---HHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC
Confidence 367999999999999999999865 4544 577777543322 24677899999999999999999999998754
Q ss_pred eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 712 HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
.++|+||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 -~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a 164 (327)
T 3lzb_A 91 -VQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLA 164 (327)
T ss_dssp -EEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-
T ss_pred -ceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcce
Confidence 78999999999999999553 34689999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC--CC
Q 039137 792 KFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS--RL 866 (912)
Q Consensus 792 ~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~--~~ 866 (912)
+........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||+..... ........ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~~~~~~~ 238 (327)
T 3lzb_A 165 KLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS------EISSILEKGERL 238 (327)
T ss_dssp ---------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHHHHHTTCCC
T ss_pred eEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH------HHHHHHHcCCCC
Confidence 876543222 233456788999999999999999999999999999999 99998632111 11111111 12
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
+.+. ..+..+.+++.+||+.||.+|||+.|+++.|++...
T Consensus 239 ~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 239 PQPP----ICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp CCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred CCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 2221 234468899999999999999999999999998763
No 189
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.1e-38 Score=335.95 Aligned_cols=252 Identities=25% Similarity=0.344 Sum_probs=204.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+.+ +++.||+|++...... ...+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV---DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYL 82 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT---THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch---hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEE
Confidence 467999999999999999999876 7899999998643322 245778999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+....
T Consensus 83 v~e~~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 156 (276)
T 2yex_A 83 FLEYCSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFR 156 (276)
T ss_dssp EEECCTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred EEEecCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence 999999999999983 335689999999999999999999999 99999999999999999999999999998654
Q ss_pred CCC--CCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 796 PDS--SNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 796 ~~~--~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
... .......|++.|+|||++.+..+ +.++||||||+++|||++|+.||+..... ..............+ .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~--~ 230 (276)
T 2yex_A 157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDS----CQEYSDWKEKKTYLN--P 230 (276)
T ss_dssp ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTT----SHHHHHHHTTCTTST--T
T ss_pred CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchH----HHHHHHhhhcccccC--c
Confidence 322 22345678999999999987765 77999999999999999999998632111 001111111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 1234456889999999999999999999875
No 190
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.5e-38 Score=341.33 Aligned_cols=259 Identities=23% Similarity=0.366 Sum_probs=203.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeCC----CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE-cCC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPS----GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS-HPK 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~-~~~ 711 (912)
..+|++.+.||+|+||+||+|++.+ ...||+|.+.... .....+.+.+|+.++++++||||+++++++. .++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 100 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC
Confidence 3568889999999999999998642 2358999886532 2235677899999999999999999999964 456
Q ss_pred eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccc
Q 039137 712 HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIA 791 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla 791 (912)
..++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a 175 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLA 175 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGG
T ss_pred ceEEEEeCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccc
Confidence 78999999999999999954 235688999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC----CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCC
Q 039137 792 KFLNPDS----SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRL 866 (912)
Q Consensus 792 ~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 866 (912)
+...... .......+++.|+|||.+.+..++.++||||+|+++|||++ |.+||.... .............
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~ 250 (298)
T 3f66_A 176 RDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLLQGRR 250 (298)
T ss_dssp CCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----TTTHHHHHHTTCC
T ss_pred ccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHHHhcCCC
Confidence 8664332 12234567789999999999999999999999999999999 555654211 1111111122221
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
...+ ...+..+.+++.+||+.||++|||++|+++.|++.+.+
T Consensus 251 ~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 251 LLQP---EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCC---ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 11234588999999999999999999999999998764
No 191
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1e-38 Score=343.92 Aligned_cols=250 Identities=22% Similarity=0.405 Sum_probs=201.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CC-------CEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SG-------EIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS 708 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~ 708 (912)
.++|++.+.||+|+||+||+|++. ++ ..||+|++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----RNYSESFFEAASMMSKLSHKHLVLNYGVCV 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----GGGHHHHHHHHHHHHTSCCTTBCCEEEEEC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 367899999999999999999865 33 469999985422 225678999999999999999999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc------
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE------ 782 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~------ 782 (912)
.++..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 157 (289)
T 4fvq_A 83 CGDENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNP 157 (289)
T ss_dssp CTTCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBC
T ss_pred eCCCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccccccc
Confidence 999999999999999999999543 24489999999999999999999999 9999999999999998887
Q ss_pred --EEEeccccccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCC-Cccchhccccccccch
Q 039137 783 --AHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKH-PRDFLFEMSSSSSNMN 858 (912)
Q Consensus 783 --~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~-pf~~~~~~~~~~~~~~ 858 (912)
+||+|||++..... .....+++.|+|||++.+ ..++.++||||+|+++|||++|.. ||..... ...
T Consensus 158 ~~~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~------~~~ 227 (289)
T 4fvq_A 158 PFIKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS------QRK 227 (289)
T ss_dssp CEEEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HHH
T ss_pred ceeeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch------HHH
Confidence 99999999975432 234567899999999887 678999999999999999999554 4431110 111
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 859 IEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
..........+.. .+..+.+++.+||+.||++|||++|+++.|++.+
T Consensus 228 ~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 228 LQFYEDRHQLPAP----KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HHHHHTTCCCCCC----SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred HHHhhccCCCCCC----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1111111111111 1234778999999999999999999999998754
No 192
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.2e-38 Score=342.48 Aligned_cols=250 Identities=27% Similarity=0.419 Sum_probs=207.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.+.|++.+.||+|+||.||+|+.. +++.||+|++....... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 97 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED---EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWI 97 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCST---THHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHH---HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 456999999999999999999865 78999999987553322 46778999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++.. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 98 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 170 (303)
T 3a7i_A 98 IMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 170 (303)
T ss_dssp EEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECB
T ss_pred EEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecC
Confidence 9999999999999843 4689999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
..........|++.|+|||++.+..++.++||||||+++|+|++|+.||....... ..........+.. ...
T Consensus 171 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~---~~~ 242 (303)
T 3a7i_A 171 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK-----VLFLIPKNNPPTL---EGN 242 (303)
T ss_dssp TTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCC---CSS
T ss_pred ccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH-----HHHHhhcCCCCCC---ccc
Confidence 55444556678999999999999999999999999999999999999986321110 0011111111111 012
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQL 904 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~~ 904 (912)
.+..+.+++.+||+.||++|||+.|+++.
T Consensus 243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 YSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred cCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 23458899999999999999999999763
No 193
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.6e-38 Score=365.61 Aligned_cols=252 Identities=22% Similarity=0.362 Sum_probs=203.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|+++ +++.||+|++........ ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTS--SNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----C--TTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCch--HHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 457999999999999999999976 788999999876543222 35678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC---CcEEEecccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG---YEAHVSDFGIAK 792 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~Dfgla~ 792 (912)
||||+++|+|.+.+... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.. +.+||+|||+++
T Consensus 114 v~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~ 187 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187 (494)
T ss_dssp EEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence 99999999999988443 4689999999999999999999999 99999999999999764 459999999998
Q ss_pred ccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChh
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLH 872 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (912)
..... .......||+.|+|||++.+ .++.++||||+||++|+|++|..||..... ......+......++...
T Consensus 188 ~~~~~-~~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~ 260 (494)
T 3lij_A 188 VFENQ-KKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTD-----QEILRKVEKGKYTFDSPE 260 (494)
T ss_dssp ECBTT-BCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCCCCCSGG
T ss_pred ECCCC-ccccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCCCCchh
Confidence 76543 23445679999999998864 699999999999999999999999863211 112222333344444334
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+.++|.+||+.||.+|||+.|+++
T Consensus 261 ~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 261 WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 4455667889999999999999999999875
No 194
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.1e-38 Score=354.20 Aligned_cols=248 Identities=22% Similarity=0.380 Sum_probs=197.1
Q ss_pred cCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC--CCccccEEEEEEcCCeeeE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR--HRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~~l 715 (912)
.+|++.+.||+|+||+||+|...+++.||||++..... .....+.+.+|+++++.++ ||||+++++++..++..++
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~l 133 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 133 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEE
Confidence 46999999999999999999988899999999875433 2335678999999999996 5999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||| +.+++|.+++... ..+++.+++.++.||+.||+|||++ +|+||||||+||+++ ++.+||+|||+++...
T Consensus 134 v~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 134 VME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred EEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 999 5678999999543 3688999999999999999999999 999999999999996 5799999999998765
Q ss_pred CCCC--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 796 PDSS--NWSELAGTHGYVAPELAYT-----------LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 796 ~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ........
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~~~~~~~ 281 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----ISKLHAII 281 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HHHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH----HHHHHHHh
Confidence 4322 2345679999999999865 36889999999999999999999998532111 01111222
Q ss_pred cCCC--CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRL--PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
+... ..+.. .+..+.+++.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 282 DPNHEIEFPDI----PEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CTTSCCCCCCC----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccccCCCCcc----chHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 2221 22211 1345789999999999999999999975
No 195
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=346.63 Aligned_cols=256 Identities=30% Similarity=0.470 Sum_probs=201.6
Q ss_pred cCCCCCceeeecCceEEEEEEeCC-----CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVPS-----GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
++|++.+.||+|+||+||+|++.. +..||+|++.... .......+.+|+.+++.++||||+++++++...+.
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 120 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 120 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCC
Confidence 567788999999999999998642 2359999987543 22356678999999999999999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 195 (333)
T 1mqb_A 121 MMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSR 195 (333)
T ss_dssp EEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred cEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcch
Confidence 99999999999999999543 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCC
Q 039137 793 FLNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLP 867 (912)
Q Consensus 793 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 867 (912)
........ .....+++.|+|||++.+..++.++||||||+++|||++ |+.||..... ......+... +.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~~~~~~~~~~~ 270 (333)
T 1mqb_A 196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HEVMKAINDGFRLP 270 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTTCCCC
T ss_pred hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHCCCcCC
Confidence 76543221 123345788999999998899999999999999999999 9999852211 1111111111 122
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.+ ...+..+.+++.+||+.||++||++.++++.|++.+.
T Consensus 271 ~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 309 (333)
T 1mqb_A 271 TP----MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309 (333)
T ss_dssp CC----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred Cc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22 1234568899999999999999999999999998764
No 196
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.6e-39 Score=350.20 Aligned_cols=257 Identities=17% Similarity=0.248 Sum_probs=192.0
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||+||+|+.. +++.||+|++....... ....+.+|+++++.++||||+++++++..++..++|
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG---APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 78 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc---cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEE
Confidence 57999999999999999999976 78999999986543221 122345799999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++ +|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 152 (324)
T 3mtl_A 79 FEYLDK-DLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSI 152 (324)
T ss_dssp EECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC--
T ss_pred eccccc-CHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccC
Confidence 999985 888888543 34689999999999999999999999 999999999999999999999999999987655
Q ss_pred CCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc----------ccch------h
Q 039137 797 DSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS----------SNMN------I 859 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~----------~~~~------~ 859 (912)
.........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... .... .
T Consensus 153 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcch
Confidence 5445556678999999999876 568999999999999999999999986321100000 0000 0
Q ss_pred hhccCCCC---CC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 860 EMLDSRLP---YP--SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 860 ~~~~~~~~---~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+ .. .......+..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 00 0011123456789999999999999999999875
No 197
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-38 Score=340.20 Aligned_cols=257 Identities=25% Similarity=0.361 Sum_probs=203.3
Q ss_pred CCCCCceeeecCceEEEEEEeC-C---CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee-
Q 039137 639 DFNAEHCIGKGGHGSVYRAKVP-S---GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS- 713 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~- 713 (912)
.|+..+.||+|+||+||+|++. + +..||+|++.... .....+.+.+|+.+++.++||||+++++++..++..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 98 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---EMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLP 98 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCc
Confidence 4666789999999999999853 2 2369999986432 223567889999999999999999999999776655
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
++||||+.+|+|.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 99 ~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 173 (298)
T 3pls_A 99 HVLLPYMCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARD 173 (298)
T ss_dssp EEEECCCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCT
T ss_pred EEEEecccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccc
Confidence 999999999999999954 235688999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC----CCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC-CCCC
Q 039137 794 LNPDS----SNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS-RLPY 868 (912)
Q Consensus 794 ~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~ 868 (912)
..... .......+++.|+|||.+.+..++.++||||||+++|+|++|..|+..... ........... ..+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~ 249 (298)
T 3pls_A 174 ILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID----PFDLTHFLAQGRRLPQ 249 (298)
T ss_dssp TTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----GGGHHHHHHTTCCCCC
T ss_pred ccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC----HHHHHHHhhcCCCCCC
Confidence 54321 223345678999999999999999999999999999999996655321111 11111111111 1111
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
+ ...+..+.+++.+||+.||.+|||++++++.|++.+.+
T Consensus 250 ~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 250 P----EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp C----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C----ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1 12335688999999999999999999999999998764
No 198
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-38 Score=343.25 Aligned_cols=257 Identities=25% Similarity=0.375 Sum_probs=204.7
Q ss_pred hcCCCCCc-eeeecCceEEEEEEe--C-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEH-CIGKGGHGSVYRAKV--P-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~-~lg~G~~g~Vy~~~~--~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+ .||+|+||+||+|.+ + +++.||||++...... ....+++.+|+++++.++||||+++++++ ..+.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccC--HHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 46788888 999999999999954 2 5688999999755322 22467899999999999999999999999 5677
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp EEEEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred cEEEEEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 8999999999999999954 34589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCC
Q 039137 793 FLNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLP 867 (912)
Q Consensus 793 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~ 867 (912)
........ .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||...... ......... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 240 (291)
T 1xbb_A 166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMG 240 (291)
T ss_dssp ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCC
T ss_pred eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCC
Confidence 76544322 122345788999999988889999999999999999999 99998632111 111111111 111
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
.+ ...+..+.+++.+||+.||++||++.++++.|++.+.+
T Consensus 241 ~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 241 CP----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp CC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 11 12345688999999999999999999999999987653
No 199
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.6e-39 Score=370.32 Aligned_cols=256 Identities=22% Similarity=0.295 Sum_probs=205.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+++ +|+.||+|++...... .....+.+.+|+++++.++||||+++++++.+.+..|+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 467999999999999999999876 7999999998542111 01134568899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++.... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 262 VmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~ 337 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVP 337 (576)
T ss_dssp EECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecc
Confidence 999999999999985432 34589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..............++ ..
T Consensus 338 ~~-~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~i~~~~~~~p----~~ 411 (576)
T 2acx_A 338 EG-QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERLVKEVPEEYS----ER 411 (576)
T ss_dssp TT-CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHHHHHCCCCCC----TT
T ss_pred cC-ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHHhhcccccCC----cc
Confidence 43 233456899999999999998999999999999999999999999863211100 0111111112222222 22
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRP-----TMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 903 (912)
.+..+.++|.+||+.||++|| +++|+++
T Consensus 412 ~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 412 FSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred CCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 345688999999999999999 6676653
No 200
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.5e-38 Score=345.61 Aligned_cols=267 Identities=22% Similarity=0.365 Sum_probs=212.6
Q ss_pred HHHHHHHhcCCCCCceeeecCceEEEEEEe------CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCcccc
Q 039137 630 YEEIISATNDFNAEHCIGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVK 702 (912)
Q Consensus 630 ~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~ 702 (912)
..++....++|++.+.||+|+||+||+|++ .+++.||||++.... .....+.+.+|+.+++.+ +||||++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---CcHHHHHHHHHHHHHHhcccCCCeee
Confidence 344455578999999999999999999974 356889999987543 222456789999999999 6999999
Q ss_pred EEEEEEcCC-eeeEEEeecCCCChhhHhhccCC-------------cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeec
Q 039137 703 FYGFCSHPK-HSFIIYEYLESGSLDKILCNDAS-------------AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHR 768 (912)
Q Consensus 703 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 768 (912)
+++++..++ ..++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||++ +|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccccc
Confidence 999997654 58999999999999999965432 12388999999999999999999999 99999
Q ss_pred CCCCCCeEEcCCCcEEEeccccccccCCCCCC--ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCcc
Q 039137 769 DISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN--WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRD 845 (912)
Q Consensus 769 Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~ 845 (912)
||||+||+++.++.+||+|||+++........ .....+++.|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 99999999999999999999999876543322 234567889999999999999999999999999999998 999985
Q ss_pred chhccccccccchhhhccC-CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 846 FLFEMSSSSSNMNIEMLDS-RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..... .......... ....+. ..+..+.+++.+||+.||.+|||+.|+++.|++.+.
T Consensus 253 ~~~~~----~~~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 253 GVKID----EEFCRRLKEGTRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp TCCCS----HHHHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccchh----HHHHHHhccCccCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 32110 1111111111 111111 134568899999999999999999999999998764
No 201
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.4e-38 Score=365.14 Aligned_cols=255 Identities=24% Similarity=0.353 Sum_probs=206.4
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc---------hHHHHHHHHHHHHHhhcCCCccccEEE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM---------SFQQEEFLNEIQALTEIRHRNIVKFYG 705 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---------~~~~~~~~~Ei~~l~~l~h~niv~l~~ 705 (912)
..++|++.+.||+|+||+||+|+++ +++.||+|++........ ....+.+.+|+.+++.++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 4578999999999999999999976 688999999875432211 123567899999999999999999999
Q ss_pred EEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC---c
Q 039137 706 FCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY---E 782 (912)
Q Consensus 706 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~---~ 782 (912)
++.+++..++||||+++|+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++ .
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 99999999999999999999998844 34689999999999999999999999 999999999999999776 6
Q ss_pred EEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 783 AHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 783 ~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
+||+|||++...... .......||+.|+|||++.+ .++.++||||+||++|+|++|..||..... ......+.
T Consensus 188 ~kl~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~ 260 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD-YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND-----QDIIKKVE 260 (504)
T ss_dssp EEECCCTTCEECCTT-SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH
T ss_pred EEEEECCCCEEcCCC-CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH
Confidence 999999999876543 33455679999999999874 589999999999999999999999863211 12222333
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....++.......+..+.+++.+||+.||.+|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 261 KGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 33444443333445677899999999999999999999875
No 202
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.1e-38 Score=347.80 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=204.7
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCE--EEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEI--FAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
++|++.+.||+|+||.||+|++. ++.. +|+|.+...... ...+.+.+|+++++++ +||||+++++++...+..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 101 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK---DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 101 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccch---HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCce
Confidence 67999999999999999999875 5654 499988643222 2456788999999999 899999999999999999
Q ss_pred eEEEeecCCCChhhHhhccC-------------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC
Q 039137 714 FIIYEYLESGSLDKILCNDA-------------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG 780 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 780 (912)
++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~ 178 (327)
T 1fvr_A 102 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 178 (327)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGG
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCC
Confidence 99999999999999996542 234689999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchh
Q 039137 781 YEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNI 859 (912)
Q Consensus 781 ~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~ 859 (912)
+.+||+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ....
T Consensus 179 ~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~ 252 (327)
T 1fvr_A 179 YVAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 252 (327)
T ss_dssp GCEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH
T ss_pred CeEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHHH
Confidence 99999999999743321 12233456889999999998889999999999999999998 99998532110 1111
Q ss_pred hhccC-CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 860 EMLDS-RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 860 ~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..... ....+ ...+..+.+++.+||+.||++|||++|+++.|++.+.+
T Consensus 253 ~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 253 KLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HGGGTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HhhcCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11111 11111 12345688999999999999999999999999988754
No 203
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-38 Score=350.65 Aligned_cols=248 Identities=26% Similarity=0.405 Sum_probs=199.9
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
+.|+..+.||+|+||+||+|+.. +++.||||++...... .....+.+.+|+++++.++||||+++++++..++..++|
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEcccccc-chHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 45889999999999999999864 7899999998754332 222456789999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+. |++.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 99998 5788877432 35689999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 797 DSSNWSELAGTHGYVAPELAY---TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||....... ..........+.. ..
T Consensus 207 ~----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-----~~~~~~~~~~~~~--~~ 275 (348)
T 1u5q_A 207 A----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALYHIAQNESPAL--QS 275 (348)
T ss_dssp B----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCC--CC
T ss_pred C----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhcCCCCC--CC
Confidence 2 3457899999999884 5678999999999999999999999985221110 0111111111111 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+..+.+++.+||+.||++|||++++++
T Consensus 276 ~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 123455789999999999999999999875
No 204
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=9.6e-39 Score=342.21 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=204.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc--CCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH--PKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~~~~ 713 (912)
.++|++.+.||+|+||.||+|+.+ +++.||+|++...... ....+.+.+|+++++.++||||+++++++.. .+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTL 82 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC--HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC--HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceE
Confidence 468999999999999999999876 7899999999754332 2356789999999999999999999998853 5688
Q ss_pred eEEEeecCCCChhhHhhccC-CcccCCHHHHHHHHHHHHHHHHHHHhCCCCC-----eeecCCCCCCeEEcCCCcEEEec
Q 039137 714 FIIYEYLESGSLDKILCNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPP-----IVHRDISSKNVLLDLGYEAHVSD 787 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlk~~Nill~~~~~~kl~D 787 (912)
++||||+++++|.+++.... ....+++.+++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~d 159 (279)
T 2w5a_A 83 YIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGD 159 (279)
T ss_dssp EEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECC
T ss_pred EEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEec
Confidence 99999999999999995532 234589999999999999999999998 7 99999999999999999999999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCC
Q 039137 788 FGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLP 867 (912)
Q Consensus 788 fgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 867 (912)
||.++.............|++.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+.....+
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~i~~~~~~ 234 (279)
T 2w5a_A 160 FGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----KELAGKIREGKFR 234 (279)
T ss_dssp CCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCCC
T ss_pred CchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----HHHHHHHhhcccc
Confidence 99998765443333455789999999999998899999999999999999999999863211 1111112222221
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHH
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLL 905 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L 905 (912)
... ...+..+.+++.+||+.||++|||++|+++.+
T Consensus 235 ~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 235 RIP---YRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cCC---cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 111 12345688999999999999999999998754
No 205
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.5e-38 Score=349.08 Aligned_cols=263 Identities=24% Similarity=0.319 Sum_probs=207.8
Q ss_pred hcCCCCCceeeecCceEEEEEEe-----CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE--c
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV-----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS--H 709 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~ 709 (912)
.++|++.+.||+|+||.||+|++ .+++.||||++... .....+.+.+|+++++.++||||+++++++. .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 97 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG 97 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC
Confidence 36799999999999999999983 36889999998743 2235677899999999999999999999987 4
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
.+..++||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 98 RQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp SCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred CceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 45689999999999999999543 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCC---CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccc------ccc---cc
Q 039137 790 IAKFLNPDSS---NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS------SSS---NM 857 (912)
Q Consensus 790 la~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~------~~~---~~ 857 (912)
++........ ......+++.|+|||++.+..++.++||||||+++|+|++|+.||........ ... ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 252 (327)
T 3lxl_A 173 LAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252 (327)
T ss_dssp GCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHH
T ss_pred cceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHH
Confidence 9987654332 12334578889999999998899999999999999999999999853211100 000 00
Q ss_pred hhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 858 NIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
...........+. ....+..+.+++.+||+.||++|||++|+++.|++.+.
T Consensus 253 ~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 253 LLELLEEGQRLPA--PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHHHTTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHHHhhcccCCCC--CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0111111111110 12234568899999999999999999999999998764
No 206
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-38 Score=356.17 Aligned_cols=201 Identities=26% Similarity=0.446 Sum_probs=164.0
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCC-
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPK- 711 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~- 711 (912)
...++|++.+.||+|+||.||+|.+. +++.||||++...... ....+.+.+|+.+++.+. ||||+++++++..++
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQN--STDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccC--hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 34578999999999999999999875 7899999998754332 335677889999999997 999999999997654
Q ss_pred -eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 712 -HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 712 -~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
..|+||||++ ++|.+++.. ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 155 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGL 155 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence 6899999998 589988843 4688999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---------------------CCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCcc
Q 039137 791 AKFLNPD---------------------SSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRD 845 (912)
Q Consensus 791 a~~~~~~---------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~ 845 (912)
|+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|++||.
T Consensus 156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 9865321 112334679999999999876 678999999999999999999999985
No 207
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.7e-39 Score=360.72 Aligned_cols=260 Identities=22% Similarity=0.250 Sum_probs=203.6
Q ss_pred HHHHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc
Q 039137 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH 709 (912)
Q Consensus 631 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 709 (912)
.+.....++|++.+.||+|+||+||+|+.+ +++.||+|++.+.... .....+.+.+|..++..++||||+++++++.+
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~-~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDML-KRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHH-HHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344445689999999999999999999986 7999999998532110 01123447889999999999999999999999
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
.+..|+||||+++|+|.+++.+.. ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 999999999999999999995432 3689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC-ccccccccccccccccc-------cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 790 IAKFLNPDSSN-WSELAGTHGYVAPELAY-------TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 790 la~~~~~~~~~-~~~~~g~~~y~aPE~~~-------~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
+++........ ....+||+.|+|||++. +..++.++|||||||++|||++|+.||..... ......+
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i 282 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST-----AETYGKI 282 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHH
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 99876544332 23468999999999987 35689999999999999999999999852211 1111111
Q ss_pred cc--CCCCCCChhhHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 039137 862 LD--SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESR---PTMKRVSQ 903 (912)
Q Consensus 862 ~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~evl~ 903 (912)
.. .....+. .....+..+.++|.+||. +|++| |+++|+++
T Consensus 283 ~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 283 VHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 11 1111111 112234568899999999 99998 58887753
No 208
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.1e-38 Score=336.91 Aligned_cols=256 Identities=23% Similarity=0.345 Sum_probs=203.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeCC----CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPS----GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||+||+|++.. +..||+|++.... .....+.+.+|+.+++.++||||+++++++.+ +.
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~ 86 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EP 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SS
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CC
Confidence 4679999999999999999998542 3459999987542 22356789999999999999999999999865 56
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 161 (281)
T 3cc6_A 87 TWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSR 161 (281)
T ss_dssp CEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred CEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCc
Confidence 78999999999999999543 24589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhcc-CCCCCC
Q 039137 793 FLNPDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLD-SRLPYP 869 (912)
Q Consensus 793 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~ 869 (912)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||...... ........ ...+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~ 236 (281)
T 3cc6_A 162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDRLPKP 236 (281)
T ss_dssp CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCCCCCC
T ss_pred ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCCCCCC
Confidence 7654322 2234456889999999998899999999999999999998 99998522111 11111111 112222
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
. ..+..+.+++.+||+.||++|||+.|+++.|++.+.
T Consensus 237 ~----~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 237 D----LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 1 234568899999999999999999999999988653
No 209
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.6e-38 Score=349.42 Aligned_cols=259 Identities=24% Similarity=0.389 Sum_probs=198.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|++. +++.||+|++..... .....+.+.+|+.+++.++||||+++++++...+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--chHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 467999999999999999999876 589999999865432 23346678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||++++++.++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 175 (331)
T 4aaa_A 102 VFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLA 175 (331)
T ss_dssp EEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred EEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence 9999999999888733 34589999999999999999999999 99999999999999999999999999998766
Q ss_pred CCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhccccccccc----------------h
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNM----------------N 858 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~----------------~ 858 (912)
..........|++.|+|||++.+. .++.++||||+|+++|+|++|+.||............. .
T Consensus 176 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 176 APGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp --------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred CCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhc
Confidence 554555566799999999998875 68999999999999999999999986321110000000 0
Q ss_pred hhhccCCCCC---C---ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 859 IEMLDSRLPY---P---SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 859 ~~~~~~~~~~---~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
........+. . .......+..+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000 0 0011123566889999999999999999998875
No 210
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.7e-38 Score=339.60 Aligned_cols=249 Identities=25% Similarity=0.408 Sum_probs=204.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+.. +++.||+|++....... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 91 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEK-EGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYL 91 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHH-TTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccch-HHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEE
Confidence 367999999999999999999876 67889999985321110 1124678899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... +.+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 92 MLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999998543 4589999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||+.... ..............+. .
T Consensus 166 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~----~ 234 (284)
T 2vgo_A 166 SL--RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIVNVDLKFPP----F 234 (284)
T ss_dssp SS--CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTTCCCCCT----T
T ss_pred cc--ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----hHHHHHHhccccCCCC----c
Confidence 32 23456789999999999999999999999999999999999999863211 1111122222233322 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+..+.+++.+||+.||.+|||++|+++
T Consensus 235 ~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 3356789999999999999999999875
No 211
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.5e-38 Score=343.13 Aligned_cols=256 Identities=23% Similarity=0.296 Sum_probs=199.6
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCC----CchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPG----EMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
..++|++.+.||+|+||.||+|++. +++.||||++...... ........+.+|+++++.++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 3467999999999999999999876 6889999998654321 1111234588999999999999999999999765
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc---EEEec
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVSD 787 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~D 787 (912)
+ .++||||+++++|.+++. ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp S-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred c-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 5 899999999999999984 345689999999999999999999999 9999999999999987664 99999
Q ss_pred cccccccCCCCCCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC
Q 039137 788 FGIAKFLNPDSSNWSELAGTHGYVAPELAY---TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS 864 (912)
Q Consensus 788 fgla~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 864 (912)
||+++..... .......|++.|+|||++. ...++.++||||||+++|+|++|+.||...... ..........
T Consensus 161 fg~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~ 235 (322)
T 2ycf_A 161 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ----VSLKDQITSG 235 (322)
T ss_dssp CTTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS----SCHHHHHHHT
T ss_pred Cccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH----HHHHHHHHhC
Confidence 9999876432 2223456899999999874 466889999999999999999999998622111 1111222223
Q ss_pred CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 865 RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 865 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 333322222334567889999999999999999999874
No 212
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=353.02 Aligned_cols=261 Identities=19% Similarity=0.245 Sum_probs=204.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeCC---------CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCcccc-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPS---------GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVK----- 702 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~----- 702 (912)
.++|++.+.||+|+||.||+|++.. ++.||+|++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~~~E~~~l~~l~h~niv~~~~~~ 111 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRLFNEQNFFQRAAKPLQVNKWKKL 111 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chHHHHHHHHHHhcccchhhhhhhh
Confidence 3679999999999999999998763 789999998643 34678999999999999987
Q ss_pred ----------EEEEEEc-CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCC
Q 039137 703 ----------FYGFCSH-PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDIS 771 (912)
Q Consensus 703 ----------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 771 (912)
+++++.. .+..++||||+ +++|.+++... ....+++.+++.++.|++.||+|||++ +|+|||||
T Consensus 112 ~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dik 186 (352)
T 2jii_A 112 YSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVT 186 (352)
T ss_dssp TTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCC
T ss_pred ccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCC
Confidence 6777765 67899999999 99999999643 235799999999999999999999999 99999999
Q ss_pred CCCeEEcCCC--cEEEeccccccccCCCCC-------CccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCC
Q 039137 772 SKNVLLDLGY--EAHVSDFGIAKFLNPDSS-------NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKH 842 (912)
Q Consensus 772 ~~Nill~~~~--~~kl~Dfgla~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~ 842 (912)
|+||+++.++ .+||+|||+++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.
T Consensus 187 p~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 266 (352)
T 2jii_A 187 AENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL 266 (352)
T ss_dssp GGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9999999998 899999999986653321 1234578999999999999899999999999999999999999
Q ss_pred CccchhccccccccchhhhccCCCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 843 PRDFLFEMSSSSSNMNIEMLDSRLPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 843 pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
||.......................... ......+..+.+++.+||+.||++|||++++++.|++.+.+
T Consensus 267 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 267 PWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp TTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 9864321111001111111111111000 00011245688999999999999999999999999998754
No 213
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8e-38 Score=336.64 Aligned_cols=248 Identities=21% Similarity=0.341 Sum_probs=200.7
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||+||+|++. +++.||+|++........ ...++.+|+..+..+ +||||+++++++.+++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~ 86 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV--DEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHM 86 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSH--HHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccH--HHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeE
Confidence 3467999999999999999999986 799999999976543332 467788999999999 899999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCC-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC------------
Q 039137 714 FIIYEYLESGSLDKILCNDAS-AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG------------ 780 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~------------ 780 (912)
++||||+++++|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~ 163 (289)
T 1x8b_A 87 LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDE 163 (289)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC--------------
T ss_pred EEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccc
Confidence 999999999999999955322 25689999999999999999999999 99999999999999844
Q ss_pred -------CcEEEeccccccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhcccc
Q 039137 781 -------YEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSS 852 (912)
Q Consensus 781 -------~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~ 852 (912)
..+||+|||.+....... ...|++.|+|||++.+. .++.++||||||+++|+|++|.+|+....
T Consensus 164 ~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---- 235 (289)
T 1x8b_A 164 DDWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---- 235 (289)
T ss_dssp ------CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----
T ss_pred ccccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----
Confidence 479999999998765432 34589999999998765 56689999999999999999998753111
Q ss_pred ccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 853 SSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..........+..+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 236 ----~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 ----QWHEIRQGRLPRIP---QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHHHHHTTCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHcCCCCCCC---cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 11111222221111 123356889999999999999999999875
No 214
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.8e-38 Score=354.70 Aligned_cols=254 Identities=10% Similarity=0.011 Sum_probs=184.3
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc--CCCccccEE-------EEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI--RHRNIVKFY-------GFC 707 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l--~h~niv~l~-------~~~ 707 (912)
.+|++.+.||+|+||+||+|++. +++.||||++...... .....+.+.+|+.+++.+ +||||++++ +++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAEN-SRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTT-HHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccc-cccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 45889999999999999999976 7899999999875432 223556778886655555 699988755 555
Q ss_pred EcCC-----------------eeeEEEeecCCCChhhHhhccCCcccCCHHHH------HHHHHHHHHHHHHHHhCCCCC
Q 039137 708 SHPK-----------------HSFIIYEYLESGSLDKILCNDASAKELGWTQR------LNVIKGVADALFYLHNNCFPP 764 (912)
Q Consensus 708 ~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~ 764 (912)
..++ ..++||||++ |+|.+++.... ..+.+..+ ..++.||+.||+|||++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 4432 3799999999 89999996532 23455555 68889999999999999 9
Q ss_pred eeecCCCCCCeEEcCCCcEEEeccccccccCCCCCCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCC
Q 039137 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT--LKVTEKCDVYSFGVLALEVIKGKH 842 (912)
Q Consensus 765 ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~ 842 (912)
|+||||||+||+++.++.+||+|||+++..... .....+++.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR---GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTCE---EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCCC---ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999866422 224567799999999987 679999999999999999999999
Q ss_pred Cccchhcccccccc--chhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 843 PRDFLFEMSSSSSN--MNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 843 pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
||............ ............+ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCcccccchhhhhhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 98643221111000 0011111111111 11234566889999999999999999999864
No 215
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=3.1e-38 Score=338.09 Aligned_cols=250 Identities=27% Similarity=0.399 Sum_probs=197.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-CeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP-KHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-~~~~l 715 (912)
.++|++.+.||+|+||+||+|++ +++.||+|++.... ..+.+.+|+++++.++||||+++++++... +..++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~l 92 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC--------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEE
Confidence 46799999999999999999988 58899999986432 356788999999999999999999997554 57899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 168 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168 (278)
T ss_dssp EECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred EEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccc
Confidence 999999999999995432 23478999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChhh
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLHV 873 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 873 (912)
.. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .......... ....+
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~---- 236 (278)
T 1byg_A 169 ST---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAP---- 236 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHHHHTTTCCCCCC----
T ss_pred cc---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCc----
Confidence 32 223457889999999998899999999999999999998 9999863211 1111111111 11111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
...+..+.+++.+||+.||++|||+.|+++.|++..
T Consensus 237 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 237 DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 223456889999999999999999999999998864
No 216
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.6e-37 Score=336.24 Aligned_cols=256 Identities=21% Similarity=0.341 Sum_probs=208.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCc-----hHHHHHHHHHHHHHhhcC-CCccccEEEEEE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEM-----SFQQEEFLNEIQALTEIR-HRNIVKFYGFCS 708 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-----~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~ 708 (912)
..++|++.+.||+|+||.||+|+++ +++.||+|++........ ....+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 4578999999999999999999986 789999999875532211 123467889999999995 999999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecc
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDF 788 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 788 (912)
..+..++||||+++++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred cCCeEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 99999999999999999999954 34689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCccccccccccccccccc------cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 789 GIAKFLNPDSSNWSELAGTHGYVAPELAY------TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 789 gla~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
|.+...... .......+++.|+|||++. ...++.++||||||+++|+|++|+.||..... ........
T Consensus 169 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~ 242 (298)
T 1phk_A 169 GFSCQLDPG-EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----MLMLRMIM 242 (298)
T ss_dssp TTCEECCTT-CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH
T ss_pred cchhhcCCC-cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-----HHHHHHHh
Confidence 999876543 2334567899999999875 45688999999999999999999999852211 11111222
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 22222222222344567889999999999999999999875
No 217
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=341.25 Aligned_cols=251 Identities=26% Similarity=0.407 Sum_probs=201.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||.||+|.+. +|+.||+|++.... ..+.+.+|+.+++.++||||+++++++...+..+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLW 100 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence 4578999999999999999999876 68999999987532 2456889999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||||+++++|.+++.. ....+++.+++.++.|++.||+|||++ +|+|+||||+||+++.++.+||+|||.+...
T Consensus 101 lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 175 (314)
T 3com_A 101 IVMEYCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQL 175 (314)
T ss_dssp EEEECCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEeecCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhh
Confidence 99999999999999853 235689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 795 NPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
...........|++.|+|||.+.+..++.++||||||+++|+|++|+.||....... ..........+ ......
T Consensus 176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~-~~~~~~ 249 (314)
T 3com_A 176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-----AIFMIPTNPPP-TFRKPE 249 (314)
T ss_dssp BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCC-CCSSGG
T ss_pred hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHhcCCCc-ccCCcc
Confidence 655444556678999999999999899999999999999999999999986321110 00000011100 000112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+..+.+++.+||+.||.+|||+.++++
T Consensus 250 ~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 23456889999999999999999999875
No 218
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=368.96 Aligned_cols=254 Identities=24% Similarity=0.356 Sum_probs=201.3
Q ss_pred CCCCc-eeeecCceEEEEEEeC---CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 640 FNAEH-CIGKGGHGSVYRAKVP---SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 640 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
+.+.+ .||+|+||.||+|.++ ++..||||+++..... ...+++.+|+++++.++||||+++++++.. +..++
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK---ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSS---TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCCh---HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 34444 7999999999999764 4667999999754322 246789999999999999999999999976 56899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 413 v~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~ 487 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487 (613)
T ss_dssp EEECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred EEEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence 99999999999999442 45689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCc---cccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCC
Q 039137 796 PDSSNW---SELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPS 870 (912)
Q Consensus 796 ~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~ 870 (912)
...... ....+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+... +.+.+.
T Consensus 488 ~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~-----~~~~~~i~~~~~~~~p~ 562 (613)
T 2ozo_A 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG-----PEVMAFIEQGKRMECPP 562 (613)
T ss_dssp --------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS-----HHHHHHHHTTCCCCCCT
T ss_pred CCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCC
Confidence 432221 22345689999999998999999999999999999998 9999863211 1111111111 222221
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..+..+.+++.+||+.||++||++.++++.|+..+..
T Consensus 563 ----~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 563 ----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp ----TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 2345688999999999999999999999999987653
No 219
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.4e-38 Score=346.11 Aligned_cols=262 Identities=24% Similarity=0.363 Sum_probs=196.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHH--HhhcCCCccccEEEEEEc-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA--LTEIRHRNIVKFYGFCSH----- 709 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~--l~~l~h~niv~l~~~~~~----- 709 (912)
.++|++.+.||+|+||+||+|+. +++.||||++... ....+..|.++ +..++||||+++++++..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 83 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA-------NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADG 83 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG-------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTS
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc-------chhhHHHHHHHHHHHhccCcchhhheecccccccCC
Confidence 46899999999999999999987 7899999998532 23334444444 555899999999986643
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC------CCCeeecCCCCCCeEEcCCCcE
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC------FPPIVHRDISSKNVLLDLGYEA 783 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~Nill~~~~~~ 783 (912)
....++||||+++|+|.+++... ..++.+++.++.|++.||+|||++. .++|+||||||+||+++.++.+
T Consensus 84 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 84 RMEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp CEEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred CceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 23568999999999999999443 3588999999999999999999873 2389999999999999999999
Q ss_pred EEeccccccccCCCC--------CCcccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHhCCCCccchh
Q 039137 784 HVSDFGIAKFLNPDS--------SNWSELAGTHGYVAPELAYT-------LKVTEKCDVYSFGVLALEVIKGKHPRDFLF 848 (912)
Q Consensus 784 kl~Dfgla~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwslG~vl~elltg~~pf~~~~ 848 (912)
||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||....
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~ 239 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTS
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCcc
Confidence 999999998765321 11234569999999999876 456679999999999999999987763211
Q ss_pred ccccccccc-----------------hhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 849 EMSSSSSNM-----------------NIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 849 ~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
......... .........+.........+..+.++|.+||+.||++|||++|+++.|++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp CCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 111000000 00000111111111223355679999999999999999999999999998774
No 220
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.8e-38 Score=337.99 Aligned_cols=259 Identities=22% Similarity=0.323 Sum_probs=200.7
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
++|++.+.||+|+||.||+|+.+ +++.||+|++....... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE--GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccch--hhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 57999999999999999999876 78999999986543221 1346788999999999999999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||++ ++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+.....
T Consensus 81 ~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 155 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV 155 (299)
T ss_dssp EECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred EEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence 99998 59999985432 34588999999999999999999999 999999999999999999999999999987755
Q ss_pred CCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCccchhccccccc----------cc---hhhhc
Q 039137 797 DSSNWSELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS----------NM---NIEML 862 (912)
Q Consensus 797 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~----------~~---~~~~~ 862 (912)
.........+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||........... .. .....
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 156 PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCc
Confidence 444445567899999999988765 78999999999999999999999863221100000 00 00000
Q ss_pred cCCCCCCC-------hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRLPYPS-------LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~~~~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
+.....+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 001123456889999999999999999998875
No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=344.04 Aligned_cols=259 Identities=21% Similarity=0.341 Sum_probs=203.6
Q ss_pred hcCCCCCceeeecCceEEEEEEe-CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE----cCC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS----HPK 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~----~~~ 711 (912)
.++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+++++.++||||+++++++. ...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCc
Confidence 46799999999999999999987 47999999988542 2235678899999999999999999999986 335
Q ss_pred eeeEEEeecCCCChhhHhhccC-CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 712 HSFIIYEYLESGSLDKILCNDA-SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 712 ~~~lv~e~~~~g~L~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
..++||||+++|+|.+++.... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 7899999999999999985532 345689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC---------ccccccccccccccccccCC---CCcchhHHHHHHHHHHHHhCCCCccchhccccccccch
Q 039137 791 AKFLNPDSSN---------WSELAGTHGYVAPELAYTLK---VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMN 858 (912)
Q Consensus 791 a~~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~---~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~ 858 (912)
+......... .....|++.|+|||++.+.. ++.++||||||+++|||++|+.||+........ ..
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~ 257 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---VA 257 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---HH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---hh
Confidence 8765321111 12345799999999987654 688999999999999999999998643221111 11
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHh
Q 039137 859 IEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEK 908 (912)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 908 (912)
.........+. ....+..+.+++.+||+.||.+|||++++++.|+..
T Consensus 258 -~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 258 -LAVQNQLSIPQ--SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp -HHHHCC--CCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred -HHhhccCCCCc--cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 11111111111 112345688999999999999999999999999864
No 222
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-37 Score=354.40 Aligned_cols=200 Identities=24% Similarity=0.376 Sum_probs=169.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP----- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 710 (912)
.++|++.+.||+|+||.||+|+++ +++.||||++..... .....+++.+|+.+++.++||||+++++++...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFE--DLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTT--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhc--ChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 468999999999999999999876 688999999975432 233567899999999999999999999999766
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
+..|+||||++ |+|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGl 175 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGL 175 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCC
Confidence 57899999987 499999843 35689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC----------------------Ccccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhCCCCcc
Q 039137 791 AKFLNPDSS----------------------NWSELAGTHGYVAPELA-YTLKVTEKCDVYSFGVLALEVIKGKHPRD 845 (912)
Q Consensus 791 a~~~~~~~~----------------------~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltg~~pf~ 845 (912)
++....... .....+||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 987654321 23566889999999986 56679999999999999999999766653
No 223
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7.2e-38 Score=343.61 Aligned_cols=259 Identities=25% Similarity=0.362 Sum_probs=203.7
Q ss_pred hcCCCCCceeeecCceEEEEEEe------CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV------PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~ 710 (912)
.++|++.+.||+|+||.||+|++ .+++.||||++.... ......++.+|+.+++.++||||+++++++...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---SEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 46799999999999999999984 257789999986432 223566789999999999999999999999999
Q ss_pred CeeeEEEeecCCCChhhHhhccCC----cccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---CCcE
Q 039137 711 KHSFIIYEYLESGSLDKILCNDAS----AKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL---GYEA 783 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~ 783 (912)
+..++||||+++++|.+++..... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999965432 24589999999999999999999999 9999999999999994 4469
Q ss_pred EEeccccccccCCCCC--CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhh
Q 039137 784 HVSDFGIAKFLNPDSS--NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIE 860 (912)
Q Consensus 784 kl~Dfgla~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~ 860 (912)
||+|||++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||..... ......
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~ 257 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----QEVLEF 257 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHHH
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-----HHHHHH
Confidence 9999999976543321 2234567899999999998899999999999999999998 9999852211 111111
Q ss_pred hccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 861 MLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 861 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
.......... ...+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 258 ~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 258 VTSGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1111111111 123456889999999999999999999999998764
No 224
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.8e-37 Score=334.36 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=198.2
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc----CCe
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH----PKH 712 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----~~~ 712 (912)
..|.+.+.||+|+||+||+|.+. ++..||+|++...... ....+.+.+|+.+++.++||||+++++++.. ...
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCce
Confidence 34788889999999999999875 6889999998654322 2356788999999999999999999999865 356
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCeEEc-CCCcEEEeccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHRDISSKNVLLD-LGYEAHVSDFG 789 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~Dfg 789 (912)
.++||||+++++|.+++.. ...+++..++.++.|++.||+|||++ + |+||||||+||+++ .++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 8999999999999999954 24689999999999999999999999 7 99999999999998 78999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
++..... .......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||...... ............ +
T Consensus 178 ~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~~~--~ 248 (290)
T 1t4h_A 178 LATLKRA--SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRRVTSGVK--P 248 (290)
T ss_dssp GGGGCCT--TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHHHTTTCC--C
T ss_pred Ccccccc--cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHHHhccCC--c
Confidence 9975433 23345678999999998765 5899999999999999999999998521111 111111111111 1
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1111222356889999999999999999998875
No 225
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=9.2e-38 Score=346.37 Aligned_cols=259 Identities=20% Similarity=0.303 Sum_probs=197.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc------
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH------ 709 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 709 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++........ ....+.+|+++++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEG--FPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSS--SCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccccc--chHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 367999999999999999999975 789999999866543322 34567899999999999999999999976
Q ss_pred --CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEec
Q 039137 710 --PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSD 787 (912)
Q Consensus 710 --~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 787 (912)
.+..++||||+++ ++.+.+... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 94 RCKGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp ---CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred cCCceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEcc
Confidence 3468999999986 777766332 34589999999999999999999999 999999999999999999999999
Q ss_pred cccccccCCC----CCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccc---------
Q 039137 788 FGIAKFLNPD----SSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS--------- 853 (912)
Q Consensus 788 fgla~~~~~~----~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~--------- 853 (912)
||+++..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~ 247 (351)
T 3mi9_A 168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGS 247 (351)
T ss_dssp CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC
T ss_pred chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 9999876532 222345678999999998876 45799999999999999999999998632110000
Q ss_pred ------cccchhhhcc---C-CCCCCChh--h--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 854 ------SSNMNIEMLD---S-RLPYPSLH--V--QKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 854 ------~~~~~~~~~~---~-~~~~~~~~--~--~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......... . ........ . ...+..+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 248 ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000000000 0 00000000 0 011345889999999999999999998875
No 226
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.2e-38 Score=376.16 Aligned_cols=247 Identities=21% Similarity=0.321 Sum_probs=206.8
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||.||+|+++ +++.||||++....... ....+.+..|..++..+ +||+|+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ-DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHH-TTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccccc-HHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 4578999999999999999999876 68899999986421110 11345678899999988 799999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
|+||||+++|+|.+++... +.+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 418 ~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~ 491 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKE 491 (674)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEE
T ss_pred EEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeec
Confidence 9999999999999999543 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhh
Q 039137 794 LNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHV 873 (912)
Q Consensus 794 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 873 (912)
............||+.|+|||++.+..++.++|||||||++|||++|+.||... ........+......++.
T Consensus 492 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~-----~~~~~~~~i~~~~~~~p~--- 563 (674)
T 3pfq_A 492 NIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE-----DEDELFQSIMEHNVAYPK--- 563 (674)
T ss_dssp CCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHSSCCCCCT---
T ss_pred cccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhCCCCCCc---
Confidence 555555566778999999999999999999999999999999999999998632 112233344444444443
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 039137 874 QKKLMSIMQVAFSCLDQNPESRPTM 898 (912)
Q Consensus 874 ~~~~~~l~~li~~cl~~dP~~RPt~ 898 (912)
..+.++.++|.+||+.||++||++
T Consensus 564 -~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 564 -SMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp -TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred -cCCHHHHHHHHHHccCCHHHCCCC
Confidence 234568899999999999999997
No 227
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=5.8e-38 Score=335.56 Aligned_cols=250 Identities=24% Similarity=0.377 Sum_probs=195.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+++ +++.||+|++...... .....+.+.+|+..++.++||||+++++++..++..++
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIR-SLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccccc-chhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 367999999999999999999986 7999999998532110 01134578899999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++... ..+++.+++.++.|++.||+|||++ +|+|+||||+||+++.++.+||+|||++....
T Consensus 89 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~ 162 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162 (276)
T ss_dssp EEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred EEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccC
Confidence 99999999999999543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQ 874 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (912)
.. .......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||+.... ..............+.
T Consensus 163 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~---- 232 (276)
T 2h6d_A 163 DG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFKKIRGGVFYIPE---- 232 (276)
T ss_dssp C--------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCCCT----
T ss_pred CC-cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHHhhcCcccCch----
Confidence 43 22344578999999999988765 6899999999999999999999862111 1111111122222221
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 875 KKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 875 ~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 233 YLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 12345789999999999999999999986
No 228
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=347.12 Aligned_cols=254 Identities=20% Similarity=0.316 Sum_probs=194.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK---- 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 711 (912)
.++|++.+.||+|+||.||+|.+. +|+.||||++..... .....+++.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc--CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcccc
Confidence 467999999999999999999875 799999999976532 2335677899999999999999999999997653
Q ss_pred --eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 712 --HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 712 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
..|+||||+ +++|.+++.. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 459999999 7799999854 4589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc------ccchh---
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS------SNMNI--- 859 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~------~~~~~--- 859 (912)
+++..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.......... .....
T Consensus 174 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 174 LARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFV 250 (367)
T ss_dssp TCEECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99875432 345678999999999877 679999999999999999999999986321110000 00000
Q ss_pred ---------hhcc--CCCCCC--ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 860 ---------EMLD--SRLPYP--SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 860 ---------~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.... ...... .......+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 000000 0001123456889999999999999999998876
No 229
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1e-37 Score=358.77 Aligned_cols=195 Identities=24% Similarity=0.368 Sum_probs=155.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP----- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 710 (912)
.++|++.+.||+|+||+||+|+++ +++.||||++..... .....+++.+|+++++.++||||+++++++...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE--DLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhc--CHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 368999999999999999999876 789999999865432 233567899999999999999999999999443
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
...|+||||+. ++|.+++.. ...+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 130 ~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGl 202 (458)
T 3rp9_A 130 DELYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGL 202 (458)
T ss_dssp CCEEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeeccccc
Confidence 56899999985 689998843 35699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCC---------------------------CCcccccccccccccccc-ccCCCCcchhHHHHHHHHHHHHhC
Q 039137 791 AKFLNPDS---------------------------SNWSELAGTHGYVAPELA-YTLKVTEKCDVYSFGVLALEVIKG 840 (912)
Q Consensus 791 a~~~~~~~---------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~sDvwslG~vl~elltg 840 (912)
++...... ......+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 98764321 123445789999999976 566799999999999999999994
No 230
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=367.69 Aligned_cols=256 Identities=26% Similarity=0.437 Sum_probs=208.2
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
..++|++.+.||+|+||+||+|+++.+..||||++..... ..++|.+|+++++.++||||+++++++.+ +..++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 3467889999999999999999998888899999975432 35678999999999999999999999876 67899
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++|+|.+++... ....+++.+++.|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 339 v~e~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp EECCCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred eeehhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 99999999999999532 224589999999999999999999999 99999999999999999999999999998664
Q ss_pred CCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChh
Q 039137 796 PDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLH 872 (912)
Q Consensus 796 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 872 (912)
.... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+... +.+.+.
T Consensus 415 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~-----~~~~~~i~~~~~~~~~~-- 487 (535)
T 2h8h_A 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVLDQVERGYRMPCPP-- 487 (535)
T ss_dssp CHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH-----HHHHHHHHTTCCCCCCT--
T ss_pred CCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCC--
Confidence 3211 1123456788999999998899999999999999999999 9999853211 0111111111 222221
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 873 VQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 873 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
..+..+.++|.+||+.||++|||++++++.|++.+.
T Consensus 488 --~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 488 --ECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred --CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 234568899999999999999999999999988653
No 231
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.3e-38 Score=341.36 Aligned_cols=253 Identities=26% Similarity=0.406 Sum_probs=198.1
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
..++|++.+.||+|+||.||+|+++ +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..+
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 92 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE----ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----C----CHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHH----HHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEE
Confidence 3468999999999999999999986 6899999998654322 4577889999999999999999999999999999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 167 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN 167 (302)
T ss_dssp EEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHH
T ss_pred EEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccc
Confidence 999999999999988542 34589999999999999999999999 9999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccc-----ccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 795 NPDSSNWSELAGTHGYVAPELA-----YTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
...........|++.|+|||++ .+..++.++||||||+++|+|++|+.||....... ..........+..
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~ 242 (302)
T 2j7t_A 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-----VLLKIAKSDPPTL 242 (302)
T ss_dssp HHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHHHHSCCCCC
T ss_pred cccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-----HHHHHhccCCccc
Confidence 2221222345789999999988 46678999999999999999999999986321110 1111111111110
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 -~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 243 -LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011223456889999999999999999999875
No 232
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=3.6e-38 Score=352.84 Aligned_cols=245 Identities=16% Similarity=0.145 Sum_probs=190.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHH---HHhhcCCCccccEE-------E
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQ---ALTEIRHRNIVKFY-------G 705 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~---~l~~l~h~niv~l~-------~ 705 (912)
.++|++.+.||+|+||+||+|++. +|+.||||++......... ..+.+.+|+. .++.++||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSN-AIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTT-HHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchH-HHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 467889999999999999999974 7999999999754332222 5678899995 55555799999998 7
Q ss_pred EEEcCCe-----------------eeEEEeecCCCChhhHhhccCC----cccCCHHHHHHHHHHHHHHHHHHHhCCCCC
Q 039137 706 FCSHPKH-----------------SFIIYEYLESGSLDKILCNDAS----AKELGWTQRLNVIKGVADALFYLHNNCFPP 764 (912)
Q Consensus 706 ~~~~~~~-----------------~~lv~e~~~~g~L~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ 764 (912)
++..++. .++||||+ +|+|.+++..... ...+++..++.|+.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 7766543 78999999 5799999954321 12344688899999999999999999 9
Q ss_pred eeecCCCCCCeEEcCCCcEEEeccccccccCCCCCCccccccccccccccccccC-----------CCCcchhHHHHHHH
Q 039137 765 IVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTL-----------KVTEKCDVYSFGVL 833 (912)
Q Consensus 765 ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~sDvwslG~v 833 (912)
|+||||||+||+++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||+
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA---RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC---EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC---cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 99999999999999999999999999986432 3345567 999999999887 89999999999999
Q ss_pred HHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 834 ALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 834 l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
+|||++|+.||....... ....... .. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~-----~~~~~~~-~~-------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALG-----GSEWIFR-SC-------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------C-----CSGGGGS-SC-------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCccccccc-----chhhhhh-hc-------cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999985322111 1111111 11 112345789999999999999999999875
No 233
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.2e-37 Score=334.55 Aligned_cols=248 Identities=23% Similarity=0.377 Sum_probs=204.4
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc-----
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH----- 709 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 709 (912)
...+|++.+.||+|+||.||+|++. +++.||+|++.... +.+.+|+++++.++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 80 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDP 80 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCc
Confidence 3467999999999999999999986 79999999986432 245689999999999999999999854
Q ss_pred -----------CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc
Q 039137 710 -----------PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD 778 (912)
Q Consensus 710 -----------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~ 778 (912)
....++||||+++++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp --------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred ccccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 345799999999999999995432 35689999999999999999999999 999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccch
Q 039137 779 LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMN 858 (912)
Q Consensus 779 ~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~ 858 (912)
.++.+||+|||++....... ......+++.|+|||++.+..++.++||||||+++|||++|..|+..... ..
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-------~~ 228 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK-------FF 228 (284)
T ss_dssp ETTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH-------HH
T ss_pred CCCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH-------HH
Confidence 99999999999998765442 23445789999999999999999999999999999999999999642111 11
Q ss_pred hhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 859 IEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
........+. ..+..+.+++.+||+.||++|||+.|+++.|+..-
T Consensus 229 ~~~~~~~~~~------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 229 TDLRDGIISD------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHTTCCCT------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred HHhhcccccc------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 1111111111 12345778999999999999999999999988653
No 234
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=4.8e-37 Score=342.80 Aligned_cols=255 Identities=20% Similarity=0.270 Sum_probs=193.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK---- 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~---- 711 (912)
.++|++.+.||+|+||.||+|.+. +++.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--ChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 368999999999999999999875 788999999975432 2335677889999999999999999999997654
Q ss_pred --eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 712 --HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 712 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
..++||||+++ +|.+++. ..+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 67999999985 7877773 3488999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc------c--------
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS------S-------- 855 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~------~-------- 855 (912)
+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .
T Consensus 173 ~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 251 (371)
T 2xrw_A 173 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251 (371)
T ss_dssp C-----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHT
T ss_pred cccccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99866432 22345678999999999999999999999999999999999999986321110000 0
Q ss_pred ---cchhhhcc----------------CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 ---NMNIEMLD----------------SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 ---~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
........ ...+.........+..+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00000000 0011112223334667899999999999999999999876
No 235
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=346.03 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=189.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEE------
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCS------ 708 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~------ 708 (912)
..+|++.+.||+|+||.||+|++. +++.||+|++... .....+.+.+|+.+++++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~ 102 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES 102 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence 357999999999999999999975 7899999998533 2235677899999999996 999999999994
Q ss_pred --cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCC--eeecCCCCCCeEEcCCCcEE
Q 039137 709 --HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPP--IVHRDISSKNVLLDLGYEAH 784 (912)
Q Consensus 709 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~k 784 (912)
.....++||||+. |+|.+++........+++.+++.++.|++.||+|||++ + |+||||||+||+++.++.+|
T Consensus 103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 103 DTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEE
T ss_pred ccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEE
Confidence 2345799999996 69999886655556799999999999999999999999 8 99999999999999999999
Q ss_pred EeccccccccCCCCCC------------cccccccccccccccc---ccCCCCcchhHHHHHHHHHHHHhCCCCccchhc
Q 039137 785 VSDFGIAKFLNPDSSN------------WSELAGTHGYVAPELA---YTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFE 849 (912)
Q Consensus 785 l~Dfgla~~~~~~~~~------------~~~~~g~~~y~aPE~~---~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~ 849 (912)
|+|||+++........ .....|++.|+|||++ .+..++.++||||||+++|||++|+.||+....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 9999999876543221 1134589999999988 566789999999999999999999999863211
Q ss_pred cccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 850 MSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
. .........+.. ......+.+++.+||+.||++|||+.|+++.|++...
T Consensus 259 ~---------~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 259 L---------RIVNGKYSIPPH--DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ----------------CCCCTT--CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H---------HhhcCcccCCcc--cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1 111111111110 1112346789999999999999999999999988653
No 236
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.8e-37 Score=333.71 Aligned_cols=255 Identities=23% Similarity=0.363 Sum_probs=206.7
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
....++|++.+.||+|+||.||+|+.+ +++.||+|++....... ...+.+.+|++++++++||||+++++++...+.
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 95 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSS--SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccch--HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCe
Confidence 345678999999999999999999986 78999999986543222 145778899999999999999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC---CcEEEeccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG---YEAHVSDFG 789 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~Dfg 789 (912)
.++||||+++++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|||
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 96 FYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 99999999999999988443 4689999999999999999999999 99999999999999754 469999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
++....... ......+++.|+|||.+.+. ++.++||||||+++|+|++|+.||..... ..............+
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~ 242 (287)
T 2wei_A 170 LSTCFQQNT-KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILKRVETGKYAFD 242 (287)
T ss_dssp GGGTBCCCS-SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCCCCC
T ss_pred cceeecCCC-ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCCCCCC
Confidence 998765432 23345689999999988764 89999999999999999999999853211 111112222222222
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 2223344567889999999999999999999987
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=7.2e-38 Score=337.58 Aligned_cols=259 Identities=24% Similarity=0.373 Sum_probs=197.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC--CCC--EEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP--SGE--IFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||+||+|++. +++ .||+|++....... ....+.+.+|+++++.++||||+++++++..+.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQ-PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP- 94 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCC-HHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-
Confidence 367999999999999999999853 333 68999987543322 225678999999999999999999999998755
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 95 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 95 MKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp CEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 88999999999999999543 35689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccCCCCC
Q 039137 793 FLNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDSRLPY 868 (912)
Q Consensus 793 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 868 (912)
........ .....+++.|+|||++.+..++.++||||||+++|+|++ |+.||..... ..............
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 244 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILHKIDKEGERL 244 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTSCCCC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHHHHHccCCCC
Confidence 76544322 223457788999999998889999999999999999999 9999853211 11111111111111
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
+. ....+..+.+++.+||+.||++|||+.++++.|++..
T Consensus 245 ~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 245 PR--PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp CC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CC--CcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 11 1123456889999999999999999999999998764
No 238
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=341.57 Aligned_cols=253 Identities=25% Similarity=0.410 Sum_probs=195.6
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEc---
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSH--- 709 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~--- 709 (912)
...++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 35678999999999999999999875 789999999865422 346688999999999 79999999999976
Q ss_pred ---CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEe
Q 039137 710 ---PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVS 786 (912)
Q Consensus 710 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 786 (912)
.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999996532 35689999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAY-----TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
|||++..............|++.|+|||++. +..++.++||||||+++|+|++|+.||....... .....
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~ 246 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-----ALFLI 246 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHHHH
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HHHHh
Confidence 9999987654433445567899999999987 5668999999999999999999999985321110 00111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 862 LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.....+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 247 PRNPAPR--LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHSCCCC--CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hcCcccc--CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111110 011122456889999999999999999999876
No 239
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=353.13 Aligned_cols=256 Identities=23% Similarity=0.332 Sum_probs=200.6
Q ss_pred cCCCCCceeeecCceEEEEEEe----CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCe
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKV----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~ 712 (912)
++|++.+.||+|+||.||+|+. .+++.||||++............+.+.+|+++++.+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 6799999999999999999987 378999999986432111111234566899999999 69999999999999999
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999543 4689999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCC-CCcccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 793 FLNPDS-SNWSELAGTHGYVAPELAYT--LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 793 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .............+.+
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 286 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSEPPYP 286 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHCCCCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhccCCCCC
Confidence 654322 22334679999999999885 3478999999999999999999999863211110 0111112222222332
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRP-----TMKRVSQL 904 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 904 (912)
. ..+..+.++|.+||+.||++|| +++|+++.
T Consensus 287 ~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 287 Q----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp T----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred c----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 2 2334578899999999999999 88888753
No 240
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.3e-37 Score=369.27 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=199.6
Q ss_pred ceeeecCceEEEEEEeC---CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEEEeec
Q 039137 644 HCIGKGGHGSVYRAKVP---SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFIIYEYL 720 (912)
Q Consensus 644 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 720 (912)
+.||+|+||+||+|.+. .++.||||+++..... ....+++.+|+++++.++||||+++++++.. +..++||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~ 451 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMA 451 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGC--GGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECC
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEcc
Confidence 47999999999999653 5678999998754322 2246789999999999999999999999975 5688999999
Q ss_pred CCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCCCCCC
Q 039137 721 ESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSN 800 (912)
Q Consensus 721 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 800 (912)
++|+|.+++.. ...+++.+++.|+.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++........
T Consensus 452 ~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 452 ELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp TTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred CCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999999953 34689999999999999999999999 9999999999999999999999999999876544321
Q ss_pred ---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhccC-CCCCCChhhHH
Q 039137 801 ---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLDS-RLPYPSLHVQK 875 (912)
Q Consensus 801 ---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 875 (912)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .....+... +...+ ..
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~i~~~~~~~~p----~~ 596 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAMLEKGERMGCP----AG 596 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHHHTTCCCCCC----TT
T ss_pred cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHcCCCCCCC----CC
Confidence 223456788999999999999999999999999999998 99998632111 111111111 11222 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
.+..+.+++.+||+.||++||+++++++.|++.+.+
T Consensus 597 ~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 597 CPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp CCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 345688999999999999999999999999998765
No 241
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.6e-38 Score=348.80 Aligned_cols=255 Identities=24% Similarity=0.348 Sum_probs=201.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++.... .....+.+.+|+.+++.++||||+++++++..++..++
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 108 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI 108 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEE
Confidence 467999999999999999999876 78999999987543 23356788999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++... +.+++..+..++.|++.||+|||++. +|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 183 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 183 (360)
T ss_dssp EECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence 99999999999999543 46899999999999999999999831 89999999999999999999999999997553
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc---------------------
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS--------------------- 854 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~--------------------- 854 (912)
.. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||..........
T Consensus 184 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 184 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp HH--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred cc--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 22 2234578999999999999999999999999999999999999986321100000
Q ss_pred ------------c----cchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 855 ------------S----NMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 855 ------------~----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
. ...........+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCC--CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCC--CCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0 0000000000000 001112456889999999999999999999875
No 242
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=342.62 Aligned_cols=262 Identities=26% Similarity=0.397 Sum_probs=208.0
Q ss_pred hcCCCCCceeeecCceEEEEEEe-----CCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCC
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV-----PSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPK 711 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~ 711 (912)
.++|++.+.||+|+||.||+|++ .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC--
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC
Confidence 45689999999999999999983 368899999987532 225678999999999999999999999986544
Q ss_pred --eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 712 --HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 712 --~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
..++||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 116 RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp --CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred CCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 789999999999999999553 24589999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCC---ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcc-----ccccc-c----
Q 039137 790 IAKFLNPDSSN---WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEM-----SSSSS-N---- 856 (912)
Q Consensus 790 la~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~-----~~~~~-~---- 856 (912)
++......... .....+++.|+|||.+.+..++.++||||||+++|||++|..||...... ..... .
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 191 LTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp TCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHH
T ss_pred chhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHH
Confidence 99876544321 12345677899999999888999999999999999999999997532110 00000 0
Q ss_pred chhhhccC--CCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 857 MNIEMLDS--RLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 857 ~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
........ +.+.+ ...+..+.+++.+||+.||++|||+.|+++.|++...+
T Consensus 271 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 271 HLIELLKNNGRLPRP----DGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHTTCCCCCC----TTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCC----CcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 00111111 12222 22345688999999999999999999999999987654
No 243
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-37 Score=333.37 Aligned_cols=253 Identities=22% Similarity=0.309 Sum_probs=198.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE--cCCee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS--HPKHS 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~--~~~~~ 713 (912)
.++|++.+.||+|+||.||+|.+. +++.||+|++............+.+.+|+++++.++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 478999999999999999999975 788999999864321111124577899999999999999999999984 44578
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
++||||++++ +.+++... ....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999986 77776443 345689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCC--CCccccccccccccccccccCC--CCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 794 LNPDS--SNWSELAGTHGYVAPELAYTLK--VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 794 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
..... .......|++.|+|||++.+.. ++.++||||||+++|||++|+.||+.... ..............+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~i~~~~~~~~ 233 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----YKLFENIGKGSYAIP 233 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHCCCCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHHhcCCCCCC
Confidence 65322 2233556899999999987654 37799999999999999999999863211 111111222222222
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
. ..+..+.+++.+||+.||++|||++|+++
T Consensus 234 ~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 234 G----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp S----SSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred C----ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2 22345789999999999999999999986
No 244
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.5e-37 Score=337.22 Aligned_cols=258 Identities=26% Similarity=0.407 Sum_probs=185.7
Q ss_pred HHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee
Q 039137 635 SATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 635 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~ 713 (912)
...++|++.+.||+|+||.||+|.+. +++.||||++...... ...+++.+|+.+++.++||||+++++++...+..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 88 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQ---TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDEL 88 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------CCCCCCCTTBCCEEEEEESSSCE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcc---hhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCc
Confidence 34578999999999999999999865 7899999998644321 2456788999999999999999999999999999
Q ss_pred eEEEeecCCCChhhHhhcc-----CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecc
Q 039137 714 FIIYEYLESGSLDKILCND-----ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDF 788 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 788 (912)
++||||+++++|.+++... .....+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 165 (303)
T 2vwi_A 89 WLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADF 165 (303)
T ss_dssp EEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCC
T ss_pred EEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEec
Confidence 9999999999999998531 1245689999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCC-----Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 789 GIAKFLNPDSS-----NWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 789 gla~~~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
|.+........ ......|++.|+|||++.+ ..++.++||||||+++|||++|+.||....... ......
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~ 240 (303)
T 2vwi_A 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK-----VLMLTL 240 (303)
T ss_dssp HHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-----HHHHHH
T ss_pred cchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh-----HHHHHh
Confidence 99986643321 1234578999999998875 568999999999999999999999986322111 000011
Q ss_pred cCCCCCCC------hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRLPYPS------LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~~~~~------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 241 QNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11110000 000122346889999999999999999999875
No 245
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1e-36 Score=342.98 Aligned_cols=311 Identities=21% Similarity=0.180 Sum_probs=168.4
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEE
Q 039137 107 SFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQL 186 (912)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 186 (912)
.++++++|++++|.++...+..|..+++|++|+|++|++++..|..|+.+++|++|+|++|.+++..|..++.+++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35667777777777765444446677777777777777765555667777777777777777776656666666666666
Q ss_pred EccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCc
Q 039137 187 ALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS 266 (912)
Q Consensus 187 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 266 (912)
++++|+++...+..|.++++|++|++++|.+++..|..++++++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 6666666633333345666666666666666555555555555555555555555432 1333444444444444443
Q ss_pred ccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCC
Q 039137 267 GIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWG 346 (912)
Q Consensus 267 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 346 (912)
+. ...++|+.|++++|.++..... ..++|+.|++++|.+++. ..+
T Consensus 200 ~~-----------------------------~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l- 244 (390)
T 3o6n_A 200 TL-----------------------------AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWL- 244 (390)
T ss_dssp EE-----------------------------ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGG-
T ss_pred cc-----------------------------CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHH-
Confidence 21 1123444445554444432111 123444455554444332 233
Q ss_pred CCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccc
Q 039137 347 RCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYL 426 (912)
Q Consensus 347 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 426 (912)
..+++|++|+|++|.+++..|..+..+++|+.|+|++|++++ +|..+..+++|++|
T Consensus 245 -----------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L 300 (390)
T 3o6n_A 245 -----------------------LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVL 300 (390)
T ss_dssp -----------------------GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEE
T ss_pred -----------------------cCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEE
Confidence 334444444444444444444444444445555555554442 33334445556666
Q ss_pred cccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCc
Q 039137 427 DLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483 (912)
Q Consensus 427 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 483 (912)
+|++|++++ +|..+..+++|++|+|++|+++.. + +..+++|++|++++|+++.
T Consensus 301 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 301 DLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp ECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred ECCCCccee-cCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 666665554 344455556666666666666533 2 4555666666666666654
No 246
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.1e-37 Score=354.60 Aligned_cols=261 Identities=17% Similarity=0.269 Sum_probs=205.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCC-CccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH-RNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||.||+|++. +++.||||++..... .+++.+|+++++.++| +++..+..++...+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~------~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK------HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS------SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 468999999999999999999874 799999998765432 2346789999999976 66666777778888999
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE---cCCCcEEEeccccc
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL---DLGYEAHVSDFGIA 791 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Dfgla 791 (912)
+||||+ +++|.+++... ...+++.+++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 80 lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla 153 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153 (483)
T ss_dssp EEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence 999999 88999999532 34699999999999999999999999 99999999999999 68899999999999
Q ss_pred cccCCCCCC-------ccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccC
Q 039137 792 KFLNPDSSN-------WSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDS 864 (912)
Q Consensus 792 ~~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 864 (912)
+........ .....||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~--~~~~~i~~~ 231 (483)
T 3sv0_A 154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK--QKYEKISEK 231 (483)
T ss_dssp EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH--HHHHHHHHH
T ss_pred eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH--HHHHHHhhc
Confidence 876554321 22567999999999999999999999999999999999999998632211100 000000000
Q ss_pred CCCCC-ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 865 RLPYP-SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 865 ~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
..... .......+.++.+++..||+.||++||++++|++.|++.+.+
T Consensus 232 ~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~ 279 (483)
T 3sv0_A 232 KVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR 279 (483)
T ss_dssp HHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence 00000 001122345688999999999999999999999999988653
No 247
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8.4e-37 Score=335.63 Aligned_cols=250 Identities=18% Similarity=0.265 Sum_probs=197.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEc--CCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSH--PKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~--~~~ 712 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++... ..+.+.+|+++++.++ ||||+++++++.. ...
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 367999999999999999999864 7899999998632 3567889999999997 9999999999988 567
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC-cEEEeccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY-EAHVSDFGIA 791 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfgla 791 (912)
.++||||+++++|.+++. .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||++
T Consensus 108 ~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a 178 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178 (330)
T ss_dssp EEEEEECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eEEEEeccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCc
Confidence 899999999999999882 388899999999999999999999 999999999999999776 8999999999
Q ss_pred cccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc--------ccchhh-h
Q 039137 792 KFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS--------SNMNIE-M 861 (912)
Q Consensus 792 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~--------~~~~~~-~ 861 (912)
+...... ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.......... ...... .
T Consensus 179 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~ 257 (330)
T 3nsz_A 179 EFYHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257 (330)
T ss_dssp EECCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred eEcCCCC-ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHH
Confidence 8765432 3445678999999999877 668999999999999999999999983111000000 000000 0
Q ss_pred ccCCCCC--------------------CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 862 LDSRLPY--------------------PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 862 ~~~~~~~--------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....... ........+..+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 258 DKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000000 00011123567889999999999999999999876
No 248
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.9e-37 Score=347.04 Aligned_cols=255 Identities=21% Similarity=0.270 Sum_probs=194.1
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH---- 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~---- 712 (912)
..+|++.+.||+|+||+||+|++..+..||+|++....... .+|+++++.++||||+++++++...+.
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~--------~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFK--------NRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSC--------CHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchH--------HHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 35799999999999999999999877779999986543221 269999999999999999999965433
Q ss_pred --eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc-CCCcEEEeccc
Q 039137 713 --SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVSDFG 789 (912)
Q Consensus 713 --~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~Dfg 789 (912)
.++||||++++.+............+++..++.++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 789999998855544443333456799999999999999999999999 999999999999999 79999999999
Q ss_pred cccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhccccccc-------------
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS------------- 855 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~------------- 855 (912)
+++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...........
T Consensus 188 ~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 266 (394)
T 4e7w_A 188 SAKILIAGE-PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266 (394)
T ss_dssp TCEECCTTC-CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred CcccccCCC-CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 998764432 33456789999999998765 589999999999999999999999863211100000
Q ss_pred -cchhhhccCCCCC---CCh---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 -NMNIEMLDSRLPY---PSL---HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 -~~~~~~~~~~~~~---~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...........+. ... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000001111110 000 01113457889999999999999999998875
No 249
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.4e-37 Score=346.42 Aligned_cols=269 Identities=20% Similarity=0.264 Sum_probs=199.6
Q ss_pred ccHHHHHHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCc-------hHHHHHHHHHHHHHhhcCCCcc
Q 039137 628 IVYEEIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEM-------SFQQEEFLNEIQALTEIRHRNI 700 (912)
Q Consensus 628 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~~~~Ei~~l~~l~h~ni 700 (912)
...+++....++|++.+.||+|+||.||+|.+.+++.||||++........ ....+.+.+|+++++.++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345678888999999999999999999999988899999999865433221 1234788999999999999999
Q ss_pred ccEEEEEEcC-----CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCe
Q 039137 701 VKFYGFCSHP-----KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV 775 (912)
Q Consensus 701 v~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 775 (912)
+++++++... ...++||||++ |++.+++.. ....+++.+++.++.|++.||+|||++ +|+||||||+||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 9999998542 36799999998 588887743 334689999999999999999999999 999999999999
Q ss_pred EEcCCCcEEEeccccccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc
Q 039137 776 LLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 854 (912)
Q Consensus 776 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~ 854 (912)
+++.++.+||+|||+++..... .......+++.|+|||++.+ ..++.++||||+||++|+|++|+.||..........
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 244 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLN 244 (362)
T ss_dssp EECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EEcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 9999999999999999754433 23345678999999998877 678999999999999999999999986321100000
Q ss_pred c------------------cchhhhccC---CCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 855 S------------------NMNIEMLDS---RLPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 855 ~------------------~~~~~~~~~---~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
. ......... ..+... ......+..+.+++.+||+.||++|||+.|+++
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 245 KIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0 000000000 001000 011122456889999999999999999999875
No 250
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-36 Score=361.52 Aligned_cols=311 Identities=21% Similarity=0.177 Sum_probs=173.1
Q ss_pred CCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEE
Q 039137 108 FPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLA 187 (912)
Q Consensus 108 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 187 (912)
+++++.|++++|.+.+..+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45667777777777655445566677777777777777666666667777777777777776665566666666666666
Q ss_pred ccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcc
Q 039137 188 LDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSG 267 (912)
Q Consensus 188 l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 267 (912)
|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|+.|++++|++++.. ++.+++|+.|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 6666666433344456666666666666655555555555555555555555554321 2334444444444444432
Q ss_pred cCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCC
Q 039137 268 IIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGR 347 (912)
Q Consensus 268 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 347 (912)
. ...++|+.|++++|.++...+.. .++|+.|+|++|.+++
T Consensus 207 l-----------------------------~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~-------- 246 (597)
T 3oja_B 207 L-----------------------------AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD-------- 246 (597)
T ss_dssp E-----------------------------ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--------
T ss_pred c-----------------------------cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--------
Confidence 1 11223444444444444322211 1344444444444432
Q ss_pred CCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcccccccccccccc
Q 039137 348 CPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLD 427 (912)
Q Consensus 348 l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 427 (912)
+..++.+++|++|+|++|.+.+..|..++++++|+.|+|++|++++ +|..+..+++|+.|+
T Consensus 247 ------------------~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 247 ------------------TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLD 307 (597)
T ss_dssp ------------------CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEE
T ss_pred ------------------ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEE
Confidence 1334444445555555555554445555555555555555555553 344445556666666
Q ss_pred ccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcc
Q 039137 428 LSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEK 484 (912)
Q Consensus 428 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 484 (912)
|++|.+++ +|..+..+++|++|+|++|++++. + +..+++|+.|+|++|++++.
T Consensus 308 Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 308 LSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCc-cCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 66666664 445556666666666666666543 2 45566777777777777543
No 251
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.7e-37 Score=343.98 Aligned_cols=256 Identities=22% Similarity=0.355 Sum_probs=204.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCch-------------HHHHHHHHHHHHHhhcCCCccccE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMS-------------FQQEEFLNEIQALTEIRHRNIVKF 703 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------~~~~~~~~Ei~~l~~l~h~niv~l 703 (912)
.++|++.+.||+|+||.||+|+. +++.||+|++......... ...+.+.+|+++++.++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 36899999999999999999999 9999999998643221110 112778999999999999999999
Q ss_pred EEEEEcCCeeeEEEeecCCCChhhH------hhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCCeE
Q 039137 704 YGFCSHPKHSFIIYEYLESGSLDKI------LCNDASAKELGWTQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVL 776 (912)
Q Consensus 704 ~~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nil 776 (912)
++++.+.+..++||||+++|+|.++ +.. .....+++.+++.++.|++.||+|||+ + +|+||||||+||+
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil 184 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDK-NYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNIL 184 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCS-SSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhh-ccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEE
Confidence 9999999999999999999999998 522 224679999999999999999999999 8 9999999999999
Q ss_pred EcCCCcEEEeccccccccCCCCCCccccccccccccccccccC-CCCc-chhHHHHHHHHHHHHhCCCCccchhcccccc
Q 039137 777 LDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTL-KVTE-KCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 854 (912)
Q Consensus 777 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~sDvwslG~vl~elltg~~pf~~~~~~~~~~ 854 (912)
++.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||||+++|||++|+.||......
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 258 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL---- 258 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS----
T ss_pred EcCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH----
Confidence 999999999999999876433 34456789999999999877 5666 999999999999999999998632110
Q ss_pred ccchhhhccCCCCCCC---------------hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 855 SNMNIEMLDSRLPYPS---------------LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 855 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..............+. ......+..+.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111111111111110 001233456889999999999999999999876
No 252
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.8e-37 Score=344.91 Aligned_cols=254 Identities=19% Similarity=0.315 Sum_probs=182.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP----- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 710 (912)
.++|++.+.||+|+||.||+|.+. +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 468999999999999999999865 789999999876432 233567888999999999999999999999654
Q ss_pred -CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 711 -KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 711 -~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
...++|||++ +++|.+++.. ..+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 5679999999 6799988843 4689999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc--------------
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS-------------- 854 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~-------------- 854 (912)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||..........
T Consensus 178 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~ 254 (367)
T 2fst_X 178 LARHTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred cccccccc---CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99865432 345678999999999877 678999999999999999999999986321110000
Q ss_pred ----ccchhhhccC--CCCCCCh--hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 855 ----SNMNIEMLDS--RLPYPSL--HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 855 ----~~~~~~~~~~--~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......... ..+.... .....+..+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000000000 0010000 01122456889999999999999999998875
No 253
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-36 Score=345.70 Aligned_cols=196 Identities=20% Similarity=0.288 Sum_probs=171.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc------CCCccccEEEEEEc
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI------RHRNIVKFYGFCSH 709 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l------~h~niv~l~~~~~~ 709 (912)
..+|++.+.||+|+||+||+|.+. +++.||||++... ....+.+.+|+.+++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 467999999999999999999876 6899999998642 22456677888888887 57799999999999
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc--EEEec
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE--AHVSD 787 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~D 787 (912)
.+..++||||+. ++|.+++.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 171 ~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 171 RNHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp TTEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECC
T ss_pred CCeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEee
Confidence 999999999996 58999885533 34589999999999999999999999 9999999999999999887 99999
Q ss_pred cccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcc
Q 039137 788 FGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845 (912)
Q Consensus 788 fgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~ 845 (912)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 246 FG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 246 FGSSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp CTTCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cccceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 9999765432 334678999999999999999999999999999999999999986
No 254
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=8.2e-37 Score=331.26 Aligned_cols=251 Identities=25% Similarity=0.441 Sum_probs=193.5
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc-----
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH----- 709 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~----- 709 (912)
..++|++.+.||+|+||.||+|+.. +++.||+|++.. .....+.+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-----TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFV 78 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-----EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-----cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchh
Confidence 3467999999999999999999975 799999999853 22356778999999999999999999998854
Q ss_pred --------CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC
Q 039137 710 --------PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY 781 (912)
Q Consensus 710 --------~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~ 781 (912)
.+..++||||+++|+|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~ 153 (303)
T 1zy4_A 79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESR 153 (303)
T ss_dssp C------CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTS
T ss_pred hhhcccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCC
Confidence 35679999999999999999543 34578899999999999999999999 999999999999999999
Q ss_pred cEEEeccccccccCCCC--------------CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccc
Q 039137 782 EAHVSDFGIAKFLNPDS--------------SNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDF 846 (912)
Q Consensus 782 ~~kl~Dfgla~~~~~~~--------------~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~ 846 (912)
.+||+|||++....... .......|++.|+|||++.+. .++.++||||+|+++|||++ ||..
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 154 NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 99999999998664321 122345689999999998764 68999999999999999998 4431
Q ss_pred hhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 847 LFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.... ..............+.......+..+.+++.+||+.||.+|||++|+++
T Consensus 231 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 231 GMER----VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHH----HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred chhH----HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1110 0111111112222222222333456789999999999999999999985
No 255
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=8.1e-37 Score=342.68 Aligned_cols=257 Identities=23% Similarity=0.249 Sum_probs=193.5
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC--
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP-- 710 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~-- 710 (912)
....++|++.+.||+|+||+||+|++. +|+.||||++...... ..+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------~~~E~~il~~l~hpnIv~l~~~~~~~~~ 74 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------KNRELDIMKVLDHVNIIKLVDYFYTTGD 74 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------CCHHHHHHTTCCCTTBCCEEEEEEEC--
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------HHHHHHHHHHcCCCCccchhheeeecCc
Confidence 345678999999999999999999874 7999999998654322 22699999999999999999998442
Q ss_pred ------------------------------------CeeeEEEeecCCCChhhHhhcc-CCcccCCHHHHHHHHHHHHHH
Q 039137 711 ------------------------------------KHSFIIYEYLESGSLDKILCND-ASAKELGWTQRLNVIKGVADA 753 (912)
Q Consensus 711 ------------------------------------~~~~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~ 753 (912)
...++||||+++ +|.+.+... .....+++..++.++.|++.|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a 153 (383)
T 3eb0_A 75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRA 153 (383)
T ss_dssp -----------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 348899999985 887777432 234579999999999999999
Q ss_pred HHHHHhCCCCCeeecCCCCCCeEEc-CCCcEEEeccccccccCCCCCCccccccccccccccccccC-CCCcchhHHHHH
Q 039137 754 LFYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFG 831 (912)
Q Consensus 754 L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG 831 (912)
|+|||++ +|+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||++.+. .++.++||||+|
T Consensus 154 L~~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (383)
T 3eb0_A 154 VGFIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIG 229 (383)
T ss_dssp HHHHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred HHHHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence 9999999 999999999999998 68899999999998765432 33455789999999988775 489999999999
Q ss_pred HHHHHHHhCCCCccchhcccccccc-------chh-------hhccCCCCC---CCh---hhHHHHHHHHHHHHHcccCC
Q 039137 832 VLALEVIKGKHPRDFLFEMSSSSSN-------MNI-------EMLDSRLPY---PSL---HVQKKLMSIMQVAFSCLDQN 891 (912)
Q Consensus 832 ~vl~elltg~~pf~~~~~~~~~~~~-------~~~-------~~~~~~~~~---~~~---~~~~~~~~l~~li~~cl~~d 891 (912)
|++|||++|+.||............ ... .......+. ... .....+..+.+++.+||+.|
T Consensus 230 ~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (383)
T 3eb0_A 230 CVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYE 309 (383)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCC
Confidence 9999999999998632111000000 000 000000000 000 00113456889999999999
Q ss_pred CCCCCCHHHHHH
Q 039137 892 PESRPTMKRVSQ 903 (912)
Q Consensus 892 P~~RPt~~evl~ 903 (912)
|++|||+.|+++
T Consensus 310 P~~R~t~~e~l~ 321 (383)
T 3eb0_A 310 PDLRINPYEAMA 321 (383)
T ss_dssp GGGSCCHHHHHT
T ss_pred hhhCCCHHHHhc
Confidence 999999999874
No 256
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.8e-37 Score=339.48 Aligned_cols=263 Identities=22% Similarity=0.211 Sum_probs=187.6
Q ss_pred HHHHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc
Q 039137 631 EEIISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH 709 (912)
Q Consensus 631 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 709 (912)
++.....++|++.+.||+|+||+||+|++. +++.||||++...... .....+|++.++.++||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNRELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----CCHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHHHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 445667789999999999999999999975 7899999998654322 2345678888899999999999999965
Q ss_pred CCe-------eeEEEeecCCCChhhHh-hccCCcccCCHHHHHHHHHHHHHHHHHHH--hCCCCCeeecCCCCCCeEEcC
Q 039137 710 PKH-------SFIIYEYLESGSLDKIL-CNDASAKELGWTQRLNVIKGVADALFYLH--NNCFPPIVHRDISSKNVLLDL 779 (912)
Q Consensus 710 ~~~-------~~lv~e~~~~g~L~~~l-~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlk~~Nill~~ 779 (912)
.+. .++||||+++ ++.+.+ ........+++..++.++.|++.|++||| ++ +|+||||||+||+++.
T Consensus 91 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~ 166 (360)
T 3e3p_A 91 LGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNE 166 (360)
T ss_dssp ECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEET
T ss_pred cccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeC
Confidence 433 7899999987 444433 22244567899999999999999999999 87 9999999999999996
Q ss_pred -CCcEEEeccccccccCCCCCCccccccccccccccccccCC-CCcchhHHHHHHHHHHHHhCCCCccchhcccccccc-
Q 039137 780 -GYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLK-VTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN- 856 (912)
Q Consensus 780 -~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~- 856 (912)
++.+||+|||+++...... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||............
T Consensus 167 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 245 (360)
T 3e3p_A 167 ADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245 (360)
T ss_dssp TTTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CCCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHH
Confidence 8999999999998765432 334557899999999986654 899999999999999999999998632110000000
Q ss_pred --------chhhhccCCC---------CCCC-----hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 857 --------MNIEMLDSRL---------PYPS-----LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 857 --------~~~~~~~~~~---------~~~~-----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.......... ..+. ......+..+.+++.+||+.||.+|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 0000000000 0000 000113467889999999999999999998875
No 257
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.2e-37 Score=332.30 Aligned_cols=255 Identities=24% Similarity=0.340 Sum_probs=187.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||+||+|++. +++.||+|++..... .....+.+.++...++.++||||+++++++..++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~l 83 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 83 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEE
Confidence 467999999999999999999875 789999999875432 22233445556666888899999999999999999999
Q ss_pred EEeecCCCChhhHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 716 IYEYLESGSLDKILCND-ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
||||+++ +|.+++... .....+++.+++.++.|++.||+|||++. +|+||||||+||+++.++.+||+|||++...
T Consensus 84 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 84 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 9999985 887777432 23457999999999999999999999852 8999999999999999999999999999876
Q ss_pred CCCCCCcccccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCC
Q 039137 795 NPDSSNWSELAGTHGYVAPELA----YTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPS 870 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 870 (912)
.... ......|++.|+|||++ .+..++.++||||+|+++|||++|+.||+.... .............+...
T Consensus 161 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~ 235 (290)
T 3fme_A 161 VDDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQVVEEPSPQLP 235 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHHHHSCCCCCC
T ss_pred cccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc----hHHHHHHHhccCCCCcc
Confidence 5432 23345789999999996 566789999999999999999999999862111 01111111111111111
Q ss_pred hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 871 LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 871 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+..+.+++.+||+.||++|||++|+++
T Consensus 236 --~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 --ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1123456889999999999999999999876
No 258
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.3e-36 Score=343.41 Aligned_cols=255 Identities=21% Similarity=0.305 Sum_probs=197.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC--------CCccccEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR--------HRNIVKFYGFC 707 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--------h~niv~l~~~~ 707 (912)
.++|++.+.||+|+||+||+|++. +++.||||++... ....+.+.+|+++++.++ |+||+++++++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~ 110 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDF 110 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecce
Confidence 468999999999999999999865 6889999998632 224677889999999995 78899999999
Q ss_pred E----cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCC--
Q 039137 708 S----HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGY-- 781 (912)
Q Consensus 708 ~----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~-- 781 (912)
. .....++||||+. +++.+++... ....+++.+++.++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 111 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 111 KISGVNGTHICMVFEVLG-HHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp EEEETTEEEEEEEECCCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred eecCCCCceEEEEEeccC-ccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 7 5568899999995 4665555332 2356899999999999999999999963 899999999999999775
Q ss_pred -----------------------------------------------cEEEeccccccccCCCCCCcccccccccccccc
Q 039137 782 -----------------------------------------------EAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPE 814 (912)
Q Consensus 782 -----------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE 814 (912)
.+||+|||+++..... .....||+.|+|||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE 263 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHH
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCCh
Confidence 7999999999876432 34457899999999
Q ss_pred ccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccccc----chhhh------------------ccC--------
Q 039137 815 LAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN----MNIEM------------------LDS-------- 864 (912)
Q Consensus 815 ~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~----~~~~~------------------~~~-------- 864 (912)
++.+..++.++|||||||++|||++|+.||+........... ..... ...
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 999999999999999999999999999998632111000000 00000 000
Q ss_pred -CCCCC--------ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 865 -RLPYP--------SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 865 -~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+.. .......+..+.+++.+||+.||++|||++|+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00000 0012445667899999999999999999999875
No 259
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=7.7e-37 Score=340.49 Aligned_cols=256 Identities=22% Similarity=0.310 Sum_probs=198.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP----- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 710 (912)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... .....+.+.+|+++++.++||||+++++++..+
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcccc
Confidence 468999999999999999999876 78899999986422 233457789999999999999999999999765
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
...++||||+++ +|.+++.. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~~-~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLMET-DLYKLLKT----QHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCSE-EHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccCc-CHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 368999999985 89998843 3589999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCC---Ccccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhcccccccc------chh-
Q 039137 791 AKFLNPDSS---NWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN------MNI- 859 (912)
Q Consensus 791 a~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~------~~~- 859 (912)
++....... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||............ ...
T Consensus 175 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 254 (364)
T 3qyz_A 175 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254 (364)
T ss_dssp CEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHH
T ss_pred eEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 987653322 1244579999999998654 45899999999999999999999998532111100000 000
Q ss_pred -----------hhcc---CCCCCC-ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 860 -----------EMLD---SRLPYP-SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 860 -----------~~~~---~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.... .....+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 000000 0001122456889999999999999999999875
No 260
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.3e-36 Score=331.36 Aligned_cols=250 Identities=22% Similarity=0.382 Sum_probs=195.6
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC--CCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR--HRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||.||+|++.+++.||+|++...... ....+.+.+|++++++++ ||||+++++++..++..
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~ 103 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEAD--NQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYI 103 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCC--HHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccccc--ccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEE
Confidence 45679999999999999999999988999999998754322 335678899999999997 59999999999999999
Q ss_pred eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 714 FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
++||| +.+++|.+++... ..+++.+++.++.|++.||+|||++ +|+||||||+||++++ +.+||+|||++..
T Consensus 104 ~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~ 175 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQ 175 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC
T ss_pred EEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccccc
Confidence 99999 5678999999543 4689999999999999999999999 9999999999999975 8999999999987
Q ss_pred cCCCCC--Ccccccccccccccccccc-----------CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhh
Q 039137 794 LNPDSS--NWSELAGTHGYVAPELAYT-----------LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIE 860 (912)
Q Consensus 794 ~~~~~~--~~~~~~g~~~y~aPE~~~~-----------~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~ 860 (912)
...... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ......
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~----~~~~~~ 251 (313)
T 3cek_A 176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----ISKLHA 251 (313)
T ss_dssp --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH----HHHHHH
T ss_pred ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH----HHHHHH
Confidence 654322 1234578999999999875 46888999999999999999999998532111 011111
Q ss_pred hccCC--CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 861 MLDSR--LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 861 ~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+.. ...+.. .+..+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 252 IIDPNHEIEFPDI----PEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHCTTSCCCCCCC----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcccccCCccc----chHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11211 112211 1345789999999999999999999875
No 261
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.3e-36 Score=344.65 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=190.9
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC------
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP------ 710 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~------ 710 (912)
.+|++.+.||+|+||+||+|++. +++.||||++...... ..+|+++++.++||||+++++++...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~--------~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF--------KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS--------CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh--------HHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 46889999999999999999986 6999999998654321 23699999999999999999998542
Q ss_pred CeeeEEEeecCCCChhhHhhc-cCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC-CcEEEecc
Q 039137 711 KHSFIIYEYLESGSLDKILCN-DASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG-YEAHVSDF 788 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl~Df 788 (912)
...++||||+++ ++.+.+.. ......+++..++.++.||+.||+|||++ +|+||||||+||+++.+ +.+||+||
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DF 201 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDF 201 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccc
Confidence 236799999986 66655532 23346799999999999999999999999 99999999999999965 57899999
Q ss_pred ccccccCCCCCCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCccchhcccccccc---------ch
Q 039137 789 GIAKFLNPDSSNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSN---------MN 858 (912)
Q Consensus 789 gla~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~---------~~ 858 (912)
|+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||............ ..
T Consensus 202 G~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~ 280 (420)
T 1j1b_A 202 GSAKQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280 (420)
T ss_dssp TTCEECCTTC-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred hhhhhcccCC-CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998764432 23456789999999998764 6899999999999999999999998632111000000 00
Q ss_pred hhhccC-----CCCC---CCh---hhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 859 IEMLDS-----RLPY---PSL---HVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 859 ~~~~~~-----~~~~---~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...... ..+. ... .....+..+.+++.+||+.||++|||+.|+++
T Consensus 281 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 000000 1110 000 00122456889999999999999999998874
No 262
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=6.4e-37 Score=338.06 Aligned_cols=255 Identities=24% Similarity=0.357 Sum_probs=198.7
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHH-HhhcCCCccccEEEEEEcCCee
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQA-LTEIRHRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~-l~~l~h~niv~l~~~~~~~~~~ 713 (912)
..++|++.+.||+|+||+||+|++. +|+.||||++...... ....++..|... ++.++||||+++++++..++..
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 125 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 125 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---HHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcE
Confidence 3467889999999999999999875 7899999999755332 134555566665 7778999999999999999999
Q ss_pred eEEEeecCCCChhhHhhcc-CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 714 FIIYEYLESGSLDKILCND-ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
++||||+++ +|.+++... .....+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++
T Consensus 126 ~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 126 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 999999986 998888532 23457999999999999999999999742 89999999999999999999999999998
Q ss_pred ccCCCCCCccccccccccccccccc----cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCC
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELAY----TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPY 868 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 868 (912)
..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||+.... .............+.
T Consensus 203 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~ 277 (340)
T 3an0_A 203 YLVDS-VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT----PFQQLKQVVEEPSPQ 277 (340)
T ss_dssp HHSCH-HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC----HHHHHHHHHHSCCCC
T ss_pred ecccc-cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc----hHHHHHHHhcCCCCC
Confidence 76432 1223357899999999964 34689999999999999999999999862111 001111111111111
Q ss_pred CChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 869 PSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 869 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.. ....+..+.+++.+||+.||++|||+.|+++
T Consensus 278 ~~--~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 278 LP--ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CC--GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC--cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11 1223456889999999999999999999876
No 263
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=339.25 Aligned_cols=258 Identities=23% Similarity=0.324 Sum_probs=198.9
Q ss_pred HhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
..++|++.+.||+|+||.||+|++.. .||+|++........ ..+.+.+|+.+++.++||||+++++++..++..++
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~i 106 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNED--QLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAI 106 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCC--CCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHH--HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEE
Confidence 45789999999999999999998743 499999875433221 23456789999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+++...
T Consensus 107 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 107 ITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp ECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 99999999999999442 34689999999999999999999999 999999999999998 6799999999987653
Q ss_pred CC-----CCCcccccccccccccccccc---------CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhh
Q 039137 796 PD-----SSNWSELAGTHGYVAPELAYT---------LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEM 861 (912)
Q Consensus 796 ~~-----~~~~~~~~g~~~y~aPE~~~~---------~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~ 861 (912)
.. ........|++.|+|||++.+ ..++.++||||||+++|||++|+.||...... ......
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~ 255 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQM 255 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHHH
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHh
Confidence 21 122334568999999998874 34788999999999999999999998632111 111111
Q ss_pred ccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhh
Q 039137 862 LDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIF 910 (912)
Q Consensus 862 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~ 910 (912)
.....+... ....+..+.+++.+||+.||++|||++++++.|++...
T Consensus 256 ~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 256 GTGMKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp HTTCCCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC--
T ss_pred ccCCCCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 111111110 01123457899999999999999999999999987654
No 264
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.5e-36 Score=332.95 Aligned_cols=260 Identities=19% Similarity=0.286 Sum_probs=198.0
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC--CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc---CCCccccEEEEEE--
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP--SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI---RHRNIVKFYGFCS-- 708 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l---~h~niv~l~~~~~-- 708 (912)
+.++|++.+.||+|+||.||+|++. +++.||+|++........ ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--CCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 4578999999999999999999873 688999999864332211 123455777777766 8999999999987
Q ss_pred ---cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEE
Q 039137 709 ---HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHV 785 (912)
Q Consensus 709 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 785 (912)
.....++||||++ |+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl 161 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKL 161 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEE
Confidence 5567899999998 59999985533 34589999999999999999999999 9999999999999999999999
Q ss_pred eccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccc----------
Q 039137 786 SDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS---------- 855 (912)
Q Consensus 786 ~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~---------- 855 (912)
+|||+++..... .......+++.|+|||++.+..++.++||||||+++|||++|+.||...........
T Consensus 162 ~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 162 ADFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred ecCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 999999865432 223456789999999999998999999999999999999999999863211100000
Q ss_pred cc-------hhhhcc-CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 NM-------NIEMLD-SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 ~~-------~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.. ...... .............+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000000 0000000111223456789999999999999999999874
No 265
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.1e-36 Score=334.97 Aligned_cols=253 Identities=21% Similarity=0.282 Sum_probs=173.9
Q ss_pred HhcCCCCCc-eeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc----
Q 039137 636 ATNDFNAEH-CIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH---- 709 (912)
Q Consensus 636 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~---- 709 (912)
..++|++.+ .||+|+||+||+|+++ +++.||+|++... .....+....++.++||||+++++++..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 97 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS--------PKARQEVDHHWQASGGPHIVCILDVYENMHHG 97 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc--------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCC
Confidence 356888854 6999999999999886 7999999998532 1111223334566789999999999976
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---CCcEEEe
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVS 786 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~ 786 (912)
....++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 98 ~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 98 KRCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred CceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEe
Confidence 455899999999999999995532 34689999999999999999999999 9999999999999986 4559999
Q ss_pred ccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCC
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRL 866 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 866 (912)
|||+++..... ......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||......... ............
T Consensus 174 Dfg~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~ 250 (336)
T 3fhr_A 174 DFGFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-PGMKRRIRLGQY 250 (336)
T ss_dssp CCTTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------
T ss_pred ccccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-hhHHHhhhcccc
Confidence 99999865432 234557899999999998888999999999999999999999998632221110 000111111111
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+.......+..+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 251 GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2222222334566889999999999999999999987
No 266
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.2e-36 Score=339.67 Aligned_cols=253 Identities=20% Similarity=0.333 Sum_probs=195.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCee--
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHS-- 713 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~-- 713 (912)
.++|.+.+.||+|+||+||+|.+. +|+.||+|++...... ....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQS--EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSS--HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccc--hhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 468999999999999999999876 7899999999765322 33467889999999999999999999999877654
Q ss_pred ----eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 714 ----FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 714 ----~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
++||||+. ++|.+++. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999998 58888772 3489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccc-------------
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS------------- 855 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~------------- 855 (912)
+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...........
T Consensus 190 ~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 266 (371)
T 4exu_A 190 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266 (371)
T ss_dssp CC-----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred cccccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHH
Confidence 99865432 344578999999999887 6789999999999999999999999863211000000
Q ss_pred -----cchhhhccC--CCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 -----NMNIEMLDS--RLPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 -----~~~~~~~~~--~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......... ..+... ......+..+.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000000000 000000 001123467889999999999999999998875
No 267
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-36 Score=341.27 Aligned_cols=334 Identities=22% Similarity=0.227 Sum_probs=201.1
Q ss_pred cccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceee
Q 039137 180 LTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLF 259 (912)
Q Consensus 180 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 259 (912)
+++++.|++++|.++...+..+.++++|++|+|++|.+++..+..|+++++|++|++++|++++..|..|+++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 46677888888877743333456677777777777777665556666666666666666666666566666666666666
Q ss_pred eccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcc
Q 039137 260 LYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFG 339 (912)
Q Consensus 260 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 339 (912)
|++|+++...+..|.++++|++|++++|++++..|..|..+++|++|++++|.+++. .+..+++|+.|++++|.+.+
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 666666644444456666666666666666655555566666666666666655543 13334555555555554432
Q ss_pred cccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcccccc
Q 039137 340 EILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGS 419 (912)
Q Consensus 340 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 419 (912)
. ....+|++|++++|.+... |.. ..++|+.|++++|++++. ..+..
T Consensus 201 ~-----------------------------~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l~~ 246 (390)
T 3o6n_A 201 L-----------------------------AIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWLLN 246 (390)
T ss_dssp E-----------------------------ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGGGG
T ss_pred c-----------------------------CCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHHcC
Confidence 1 1223455555555555432 221 134566666666666542 35666
Q ss_pred ccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccccccccccccccc
Q 039137 420 LINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLN 499 (912)
Q Consensus 420 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 499 (912)
+++|++|+|++|.+++..|..|..+++|++|+|++|++++ +|..+..+++|++|+|++|++++ +|..+..+++|+.|+
T Consensus 247 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 247 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLY 324 (390)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEE
T ss_pred CCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEE
Confidence 6667777777777766666666667777777777777753 45555666777777777777753 445566677777777
Q ss_pred ccCccccCCCcccccccccceEEEccCCccccCCCCCccCCCCchhhhccCCcccCC
Q 039137 500 LSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNKGLYGD 556 (912)
Q Consensus 500 ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~l~~n~~~~~~ 556 (912)
+++|++++.. +..+++|+.|++++|++.|.... ..+.......+.+++..|..
T Consensus 325 L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 325 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred CCCCccceeC---chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 7777776652 55667777788888877763221 12223333334455555543
No 268
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=331.81 Aligned_cols=255 Identities=22% Similarity=0.308 Sum_probs=190.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEE-------
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCS------- 708 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~------- 708 (912)
.++|++.+.||+|+||.||+|.+. +++.||+|++... .....+++.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 468999999999999999999986 5899999998643 2235678899999999999999999999984
Q ss_pred -------cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc-CC
Q 039137 709 -------HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD-LG 780 (912)
Q Consensus 709 -------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~ 780 (912)
..+..++||||++ |+|.+++.. +.+++.+++.++.|++.||+|||++ +|+||||||+||+++ ++
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 157 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTED 157 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCC
Confidence 3467899999998 599999832 4689999999999999999999999 999999999999997 56
Q ss_pred CcEEEeccccccccCCCC---CCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccc-
Q 039137 781 YEAHVSDFGIAKFLNPDS---SNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS- 855 (912)
Q Consensus 781 ~~~kl~Dfgla~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~- 855 (912)
+.+||+|||+++...... .......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...........
T Consensus 158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 237 (320)
T 2i6l_A 158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI 237 (320)
T ss_dssp TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 799999999998764321 22334567899999998765 6789999999999999999999999863221100000
Q ss_pred ---------cchhhhc---------cCCCCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 ---------NMNIEML---------DSRLPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 ---------~~~~~~~---------~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
....+.. +...+... ......+..+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000000 00000000 001123466889999999999999999999875
No 269
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=6e-36 Score=330.04 Aligned_cols=254 Identities=22% Similarity=0.327 Sum_probs=199.0
Q ss_pred hcCCCCCceeeecCceEEEEEEe-C-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc------cccEEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKV-P-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN------IVKFYGFCS 708 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~l~~~~~ 708 (912)
.++|++.+.||+|+||+||+|.+ + +++.||+|++... ....+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 46899999999999999999986 3 6889999998632 224577889999999997654 999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---------
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL--------- 779 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~--------- 779 (912)
..+..++||||+ +++|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 88 ~~~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~ 162 (339)
T 1z57_A 88 HHGHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNP 162 (339)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC-
T ss_pred cCCcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCC
Confidence 999999999999 789999985532 24688999999999999999999999 9999999999999987
Q ss_pred ----------CCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhc
Q 039137 780 ----------GYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFE 849 (912)
Q Consensus 780 ----------~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~ 849 (912)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 163 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 163 KIKRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp ---CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999865432 3445789999999999999999999999999999999999999863211
Q ss_pred ccccc------ccchhhhc----------cCCCCCC-------------------ChhhHHHHHHHHHHHHHcccCCCCC
Q 039137 850 MSSSS------SNMNIEML----------DSRLPYP-------------------SLHVQKKLMSIMQVAFSCLDQNPES 894 (912)
Q Consensus 850 ~~~~~------~~~~~~~~----------~~~~~~~-------------------~~~~~~~~~~l~~li~~cl~~dP~~ 894 (912)
..... ........ ....... .......+..+.+++.+||+.||++
T Consensus 240 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 10000 00000000 0000000 0001234567889999999999999
Q ss_pred CCCHHHHHH
Q 039137 895 RPTMKRVSQ 903 (912)
Q Consensus 895 RPt~~evl~ 903 (912)
|||++|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999875
No 270
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.7e-36 Score=361.16 Aligned_cols=257 Identities=24% Similarity=0.369 Sum_probs=204.6
Q ss_pred hcCCCCCceeeecCceEEEEEEeC----CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP----SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~ 712 (912)
.++|++.+.||+|+||+||+|.+. .+..||+|++.... .....+.+.+|+.+++.++||||+++++++. ++.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 467899999999999999999874 24579999986432 2235678999999999999999999999984 567
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 89999999999999999543 24589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCCCC-CccccccccccccccccccCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhcc-CCCCCC
Q 039137 793 FLNPDSS-NWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLD-SRLPYP 869 (912)
Q Consensus 793 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~ 869 (912)
....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||...... .....+.. ...+.+
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~ 614 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMP 614 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHHHHTCCCCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHcCCCCCCC
Confidence 7654322 1223456789999999998899999999999999999997 99998632111 11111111 112222
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhhhc
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKIFE 911 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l~~ 911 (912)
. ..+..+.+++.+||+.||++|||+.|+++.|++.+.+
T Consensus 615 ~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~ 652 (656)
T 2j0j_A 615 P----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 652 (656)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence 1 2345688999999999999999999999999988753
No 271
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.3e-37 Score=345.78 Aligned_cols=199 Identities=23% Similarity=0.378 Sum_probs=154.4
Q ss_pred hcCCCC-CceeeecCceEEEEEEeC---CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc--C
Q 039137 637 TNDFNA-EHCIGKGGHGSVYRAKVP---SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH--P 710 (912)
Q Consensus 637 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~--~ 710 (912)
.+.|++ +++||+|+||+||+|+++ +++.||+|++.... ..+.+.+|+.+++.++||||+++++++.. .
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG------ISMSACREIALLRELKHPNVISLQKVFLSHAD 92 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS------CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTT
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC------CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCC
Confidence 345666 558999999999999865 57889999986432 13457799999999999999999999954 6
Q ss_pred CeeeEEEeecCCCChhhHhhccC------CcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE----cCC
Q 039137 711 KHSFIIYEYLESGSLDKILCNDA------SAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL----DLG 780 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----~~~ 780 (912)
...++||||+++ +|.+++.... ....+++.+++.++.||+.||+|||++ +|+||||||+||++ +.+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 93 RKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTT
T ss_pred CeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCC
Confidence 789999999975 7877774321 223489999999999999999999999 99999999999999 678
Q ss_pred CcEEEeccccccccCCCC---CCccccccccccccccccccC-CCCcchhHHHHHHHHHHHHhCCCCcc
Q 039137 781 YEAHVSDFGIAKFLNPDS---SNWSELAGTHGYVAPELAYTL-KVTEKCDVYSFGVLALEVIKGKHPRD 845 (912)
Q Consensus 781 ~~~kl~Dfgla~~~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~sDvwslG~vl~elltg~~pf~ 845 (912)
+.+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 237 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 237 (405)
T ss_dssp TCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCC
Confidence 899999999998765432 223456789999999998874 48999999999999999999999985
No 272
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.9e-36 Score=334.67 Aligned_cols=256 Identities=24% Similarity=0.338 Sum_probs=197.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcC-----
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHP----- 710 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~----- 710 (912)
.++|++.+.||+|+||.||+|++. +|+.||||++... ........+.+|+++++.++||||+++++++..+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF---DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc---ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 468999999999999999999876 7899999998642 2233466788999999999999999999998654
Q ss_pred CeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccc
Q 039137 711 KHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGI 790 (912)
Q Consensus 711 ~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgl 790 (912)
...++||||++ ++|.+++.. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 67899999997 589998844 4689999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCCCCC----------cccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccc------
Q 039137 791 AKFLNPDSSN----------WSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS------ 853 (912)
Q Consensus 791 a~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~------ 853 (912)
++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 238 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGI 238 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Confidence 9876532211 223568999999998754 67899999999999999999999998632110000
Q ss_pred -------------cccchhhhccCC--CCCCC--hhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 854 -------------SSNMNIEMLDSR--LPYPS--LHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 854 -------------~~~~~~~~~~~~--~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+..... .+... ......+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000000 00000 011123456889999999999999999999875
No 273
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1.4e-36 Score=333.47 Aligned_cols=256 Identities=25% Similarity=0.333 Sum_probs=179.2
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHH-HHhhcCCCccccEEEEEEcCCeee
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQ-ALTEIRHRNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~-~l~~l~h~niv~l~~~~~~~~~~~ 714 (912)
.++|++.+.||+|+||.||+|..+ +++.||||++..... .....++.+|+. +++.++||||+++++++..++..+
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~ 97 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCW 97 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceE
Confidence 367999999999999999999985 789999999975432 223455666666 677789999999999999999999
Q ss_pred EEEeecCCCChhhHhhcc--CCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 715 IIYEYLESGSLDKILCND--ASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
+||||+++ +|.+++... .....+++..+..++.|++.||+|||++. +|+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999986 887777431 12456899999999999999999999952 89999999999999999999999999998
Q ss_pred ccCCCCCCcccccccccccccccc----ccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCC-C
Q 039137 793 FLNPDSSNWSELAGTHGYVAPELA----YTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRL-P 867 (912)
Q Consensus 793 ~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~ 867 (912)
...... ......|++.|+|||++ .+..++.++||||||+++|||++|+.||........ .......... .
T Consensus 175 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~ 249 (327)
T 3aln_A 175 QLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----QLTQVVKGDPPQ 249 (327)
T ss_dssp C-------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCSCCCC
T ss_pred eccccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----HHHHHhcCCCCC
Confidence 764332 22344789999999998 456789999999999999999999999863211100 0011111111 1
Q ss_pred CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 868 YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 868 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111111123456889999999999999999999875
No 274
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.5e-36 Score=342.58 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=187.4
Q ss_pred cCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeeeEE
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv 716 (912)
+.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++|
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv 87 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIA 87 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEE
Confidence 345567889999999998776678999999998532 245678999999987 899999999999999999999
Q ss_pred EeecCCCChhhHhhccCCcc----cCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC------------
Q 039137 717 YEYLESGSLDKILCNDASAK----ELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG------------ 780 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~----~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~------------ 780 (912)
|||++ |+|.+++....... ..++.+++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 88 ~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~ 163 (434)
T 2rio_A 88 LELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAE 163 (434)
T ss_dssp ECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCC
T ss_pred EecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCC
Confidence 99996 59999996543221 124456788999999999999999 99999999999999754
Q ss_pred -CcEEEeccccccccCCCCCC----cccccccccccccccccc-------CCCCcchhHHHHHHHHHHHHh-CCCCccch
Q 039137 781 -YEAHVSDFGIAKFLNPDSSN----WSELAGTHGYVAPELAYT-------LKVTEKCDVYSFGVLALEVIK-GKHPRDFL 847 (912)
Q Consensus 781 -~~~kl~Dfgla~~~~~~~~~----~~~~~g~~~y~aPE~~~~-------~~~~~~sDvwslG~vl~ellt-g~~pf~~~ 847 (912)
+.+||+|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||+..
T Consensus 164 ~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 164 NLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp SCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred ceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 47999999999877554322 234579999999999875 568999999999999999999 99998632
Q ss_pred hccccccccchhhhccCCCC---CCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 848 FEMSSSSSNMNIEMLDSRLP---YPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
.... ......... .........+..+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 244 YSRE-------SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTHH-------HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhH-------HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1110 111111111 111122455677899999999999999999999875
No 275
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=334.10 Aligned_cols=252 Identities=19% Similarity=0.327 Sum_probs=194.5
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe---
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH--- 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~--- 712 (912)
.++|.+.+.||+|+||.||+|.++ +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS--SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 357999999999999999999875 789999999976432 23346778999999999999999999999987654
Q ss_pred ---eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 713 ---SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 713 ---~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
.++||||++ ++|.+++. ..+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999998 58888772 2489999999999999999999999 99999999999999999999999999
Q ss_pred cccccCCCCCCcccccccccccccccccc-CCCCcchhHHHHHHHHHHHHhCCCCccchhccccccc-------------
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYT-LKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSS------------- 855 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~------------- 855 (912)
+++..... .....+++.|+|||++.+ ..++.++||||+|+++|||++|+.||...........
T Consensus 172 ~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 172 LARHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248 (353)
T ss_dssp CTTC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHH
T ss_pred cccCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 99865432 344578999999998877 6789999999999999999999999863211000000
Q ss_pred -----cchhhhcc-----CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 856 -----NMNIEMLD-----SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 856 -----~~~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
........ ...... ......+..+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDFT-QLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCTT-TTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccHH-HhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000 000000 011233566889999999999999999998874
No 276
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-36 Score=353.89 Aligned_cols=257 Identities=28% Similarity=0.348 Sum_probs=200.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc------
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH------ 709 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~------ 709 (912)
.++|++.+.||+|+||+||+|.+. +|+.||||++.... .....+.+.+|+++++.++||||+++++++..
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~ 89 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAP 89 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccC
Confidence 378999999999999999999875 68999999986542 23356779999999999999999999999755
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCc---EEEe
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYE---AHVS 786 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~ 786 (912)
.+..++||||+++|+|.+++........+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 90 ~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 90 NDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp TSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 677899999999999999997665555799999999999999999999999 9999999999999997765 9999
Q ss_pred ccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccc---------cccc
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSS---------SSNM 857 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~---------~~~~ 857 (912)
|||.+....... ......|++.|+|||++.+..++.++||||+|+++|+|++|..||......... ....
T Consensus 167 DFG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 167 DLGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245 (676)
T ss_dssp SCCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CC
T ss_pred cccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhh
Confidence 999998765432 334567899999999999999999999999999999999999998532110000 0000
Q ss_pred hhh------hccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHH
Q 039137 858 NIE------MLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKR 900 (912)
Q Consensus 858 ~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 900 (912)
... ......+.+.......+..+.+++.+||+.||++|||++|
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 000 0111222222233345677899999999999999999977
No 277
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=329.98 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=192.8
Q ss_pred HHHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCch--HHHHHHHHHHHHHhhc----CCCccccEEE
Q 039137 633 IISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMS--FQQEEFLNEIQALTEI----RHRNIVKFYG 705 (912)
Q Consensus 633 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~~~~~Ei~~l~~l----~h~niv~l~~ 705 (912)
.....++|++.+.||+|+||.||+|++. +++.||+|++......... .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3455688999999999999999999875 7889999999754332111 1233456799999998 8999999999
Q ss_pred EEEcCCeeeEEEee-cCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc-CCCcE
Q 039137 706 FCSHPKHSFIIYEY-LESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD-LGYEA 783 (912)
Q Consensus 706 ~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~ 783 (912)
++...+..++|||| +.+++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 789999999954 34689999999999999999999999 999999999999999 88999
Q ss_pred EEeccccccccCCCCCCccccccccccccccccccCCCC-cchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhc
Q 039137 784 HVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVT-EKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEML 862 (912)
Q Consensus 784 kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~ 862 (912)
||+|||+++..... ......|++.|+|||++.+..+. .++||||||+++|||++|+.||+.... ..
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----------~~ 246 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-----------IL 246 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-----------HH
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-----------Hh
Confidence 99999999876543 33456789999999998877664 589999999999999999999863211 11
Q ss_pred cCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 863 DSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 863 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
......+. ..+..+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 247 EAELHFPA----HVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HTCCCCCT----TSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhccCCcc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 12222221 22345789999999999999999999976
No 278
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-36 Score=358.19 Aligned_cols=335 Identities=22% Similarity=0.215 Sum_probs=210.6
Q ss_pred cccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceee
Q 039137 180 LTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLF 259 (912)
Q Consensus 180 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 259 (912)
+++++.|++++|.+....+..+.++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 45677888888887754444566777777777777777766666777777777777777777766666666777777777
Q ss_pred eccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcc
Q 039137 260 LYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFG 339 (912)
Q Consensus 260 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 339 (912)
|++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. ++.+++|+.|++++|.+.+
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCcccc
Confidence 7777776555555566666666666666666666666666666666666666665432 3334555555555555543
Q ss_pred cccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcccccc
Q 039137 340 EILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGS 419 (912)
Q Consensus 340 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 419 (912)
. ...+ +|+.|++++|.+... +..+ .++|+.|+|++|.+++ +..+..
T Consensus 207 l-----~~~~------------------------~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~ 252 (597)
T 3oja_B 207 L-----AIPI------------------------AVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLN 252 (597)
T ss_dssp E-----ECCT------------------------TCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGG
T ss_pred c-----cCCc------------------------hhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--Chhhcc
Confidence 2 1223 455555555555422 1111 1356666666666654 245666
Q ss_pred ccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccccccccccccccc
Q 039137 420 LINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLN 499 (912)
Q Consensus 420 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 499 (912)
+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLY 330 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEE
T ss_pred CCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEE
Confidence 6667777777777766666666667777777777777764 4555566677777777777775 3455566777777777
Q ss_pred ccCccccCCCcccccccccceEEEccCCccccCCCCCccCCCCchhhhccCCcccCCc
Q 039137 500 LSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNSTTFRDAPLEALQGNKGLYGDI 557 (912)
Q Consensus 500 ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~~~~~~~~~~~l~~n~~~~~~~ 557 (912)
|++|+|++.. +..++.|+.|++++|+|.|.... ..+.......+.+++..|+..
T Consensus 331 L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 331 LDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 7777776653 55567778888888888774321 223444444556677777653
No 279
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=7.4e-37 Score=334.20 Aligned_cols=247 Identities=21% Similarity=0.334 Sum_probs=200.5
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCch--HHHHHHHHHHHHHhhcC--CCccccEEEEEE
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMS--FQQEEFLNEIQALTEIR--HRNIVKFYGFCS 708 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~ 708 (912)
....++|++.+.||+|+||.||+|++. +++.||||++......... ...+.+.+|+.+++.++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 345678999999999999999999865 7899999998654322210 01244668999999996 599999999999
Q ss_pred cCCeeeEEEeecCC-CChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc-CCCcEEEe
Q 039137 709 HPKHSFIIYEYLES-GSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD-LGYEAHVS 786 (912)
Q Consensus 709 ~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~ 786 (912)
.++..++|||++.+ ++|.+++.. ...+++.+++.++.|++.||+|||++ +|+||||||+||+++ +++.+||+
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEEC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEe
Confidence 99999999999976 899999854 35689999999999999999999999 999999999999999 78899999
Q ss_pred ccccccccCCCCCCccccccccccccccccccCCC-CcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCC
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKV-TEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSR 865 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 865 (912)
|||+++..... ......|++.|+|||++.+..+ +.++||||||+++|||++|+.||...... ....
T Consensus 193 Dfg~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-----------~~~~ 259 (320)
T 3a99_A 193 DFGSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI-----------IRGQ 259 (320)
T ss_dssp CCTTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH-----------HHCC
T ss_pred eCccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhh-----------hccc
Confidence 99999876532 3345678999999999887766 67899999999999999999998632211 1111
Q ss_pred CCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 866 LPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 866 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
...+. ..+..+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 260 VFFRQ----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCSS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccccc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111 12345789999999999999999999876
No 280
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.7e-35 Score=331.80 Aligned_cols=199 Identities=21% Similarity=0.295 Sum_probs=170.1
Q ss_pred HhcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CC-----ccccEEEEEE
Q 039137 636 ATNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HR-----NIVKFYGFCS 708 (912)
Q Consensus 636 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~-----niv~l~~~~~ 708 (912)
..++|++.+.||+|+||+||+|++. +++.||||++... ....+++.+|+.+++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 3578999999999999999999876 6889999998632 224566778999988885 55 4999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc--CCCcEEEe
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD--LGYEAHVS 786 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~--~~~~~kl~ 786 (912)
..+..++||||+++ +|.+++.... ...+++..++.++.|++.||+|||++. .+|+||||||+||+++ .++.+||+
T Consensus 127 ~~~~~~lv~e~~~~-~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~ 203 (382)
T 2vx3_A 127 FRNHLCLVFEMLSY-NLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIV 203 (382)
T ss_dssp ETTEEEEEEECCCC-BHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred cCCceEEEEecCCC-CHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEE
Confidence 99999999999965 9999985533 345899999999999999999999531 1899999999999995 47789999
Q ss_pred ccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCcc
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRD 845 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~ 845 (912)
|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 204 DFG~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 204 DFGSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp CCTTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eccCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999876432 345678999999999999999999999999999999999999996
No 281
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=7.1e-37 Score=334.71 Aligned_cols=291 Identities=21% Similarity=0.247 Sum_probs=188.2
Q ss_pred CCCHHHHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCCCccceeEecCCCCeEEEeeccccccccccccccCCCCCcc
Q 039137 33 SNSAEEAHALVKWKASLEVHSRSLLHSWSLSSVNATKISPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLV 112 (912)
Q Consensus 33 ~~~~~~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~ 112 (912)
++..+|++||++||+++..++.+++.+|.... ....++|.|.|++|+..... ......++++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~--~~~~~~~~~~g~~~~~~~~~----------------l~~~~~~~l~ 84 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN--SNNPQIETRTGRALKATADL----------------LEDATQPGRV 84 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT--TTCTTSCCSHHHHHHHHHHH----------------HHHHTSTTCC
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc--cccccccccCCcchhhhHHH----------------Hhccccccee
Confidence 34567999999999999888888899995321 12458999999999631100 0012356788
Q ss_pred EEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCc
Q 039137 113 YLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNF 192 (912)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 192 (912)
.|+|++|+++ .+|+.++++++|++|+|++|.++ .+|..++.+++|++|+|++|.++ .+|..++.+++|++|++++|+
T Consensus 85 ~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~ 161 (328)
T 4fcg_A 85 ALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACP 161 (328)
T ss_dssp EEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEET
T ss_pred EEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCC
Confidence 8999999998 78888999999999999999998 88999999999999999999998 889889999999999999988
Q ss_pred CCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcc
Q 039137 193 LNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQE 272 (912)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 272 (912)
+.+.+|..+... .++..+.++++|++|++++|+++ .+|..++++++|++|+|++|++++ +|..
T Consensus 162 ~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~ 224 (328)
T 4fcg_A 162 ELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPA 224 (328)
T ss_dssp TCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGG
T ss_pred CccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchh
Confidence 888888876540 11122333444444444444444 344444444444444444444443 2333
Q ss_pred cCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCC
Q 039137 273 IGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLS 352 (912)
Q Consensus 273 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 352 (912)
+..+++|++|+|++|++.+.+|..|..+++|++|+|++|.+.+.+|..+..+++|++|+|++|++.+.+|..++.+++|+
T Consensus 225 l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 225 IHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp GGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred hccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 44444444455554444444444455555555555555554444554555555555555555555555555555555555
Q ss_pred EEeccCCcc
Q 039137 353 LLDVSINNI 361 (912)
Q Consensus 353 ~L~Ls~N~l 361 (912)
.+++..+.+
T Consensus 305 ~l~l~~~~~ 313 (328)
T 4fcg_A 305 IILVPPHLQ 313 (328)
T ss_dssp EEECCGGGS
T ss_pred EEeCCHHHH
Confidence 555554443
No 282
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=336.65 Aligned_cols=248 Identities=23% Similarity=0.313 Sum_probs=185.9
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~l 715 (912)
..+|++.+.||+|+||+||.....+++.||||++..... +.+.+|+++++.+ +||||+++++++.+.+..|+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~l 95 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYI 95 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEE
Confidence 356888999999999997665556899999999864321 2245799999999 79999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC-----CCcEEEecccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL-----GYEAHVSDFGI 790 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~-----~~~~kl~Dfgl 790 (912)
||||++ |+|.+++.... ....+.+++.++.||+.||+|||++ +|+||||||+||+++. ...+||+|||+
T Consensus 96 v~E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~ 169 (432)
T 3p23_A 96 AIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGL 169 (432)
T ss_dssp EEECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTE
T ss_pred EEECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccc
Confidence 999997 59999985433 3355567789999999999999999 9999999999999953 23588999999
Q ss_pred ccccCCCC---CCccccccccccccccccc---cCCCCcchhHHHHHHHHHHHHh-CCCCccchhccccccccchhhhcc
Q 039137 791 AKFLNPDS---SNWSELAGTHGYVAPELAY---TLKVTEKCDVYSFGVLALEVIK-GKHPRDFLFEMSSSSSNMNIEMLD 863 (912)
Q Consensus 791 a~~~~~~~---~~~~~~~g~~~y~aPE~~~---~~~~~~~sDvwslG~vl~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 863 (912)
++...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||+..... .......
T Consensus 170 a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~~~~~~ 243 (432)
T 3p23_A 170 CKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QANILLG 243 (432)
T ss_dssp EECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HHHHHTT
T ss_pred eeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HHHHHhc
Confidence 98765432 2234567999999999987 4567889999999999999999 99998522110 0000111
Q ss_pred CCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 864 SRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 864 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
................+.++|.+||+.||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 244 ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 1000000011233455789999999999999999999984
No 283
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.4e-35 Score=327.50 Aligned_cols=254 Identities=20% Similarity=0.298 Sum_probs=196.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CC-CEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc------cccEEEEEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SG-EIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN------IVKFYGFCS 708 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n------iv~l~~~~~ 708 (912)
.++|++.+.||+|+||+||+|.+. ++ +.||+|++... ....+.+.+|+.+++.++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 468999999999999999999875 44 68999998632 224667889999999997765 999999999
Q ss_pred cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE-----------
Q 039137 709 HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL----------- 777 (912)
Q Consensus 709 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill----------- 777 (912)
..+..++||||+ ++++.+++... ....+++.+++.++.||+.||+|||++ +|+||||||+||++
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 167 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNE 167 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECC
T ss_pred eCCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccc
Confidence 999999999999 55676666442 234689999999999999999999999 99999999999999
Q ss_pred --------cCCCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhc
Q 039137 778 --------DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFE 849 (912)
Q Consensus 778 --------~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~ 849 (912)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 168 HKSCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp C-CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999865432 3445789999999999999999999999999999999999999863211
Q ss_pred ccccc------ccchhhh----------ccCCCCCC-------------------ChhhHHHHHHHHHHHHHcccCCCCC
Q 039137 850 MSSSS------SNMNIEM----------LDSRLPYP-------------------SLHVQKKLMSIMQVAFSCLDQNPES 894 (912)
Q Consensus 850 ~~~~~------~~~~~~~----------~~~~~~~~-------------------~~~~~~~~~~l~~li~~cl~~dP~~ 894 (912)
..... ....... .......+ ..........+.+++.+||+.||++
T Consensus 245 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 324 (355)
T 2eu9_A 245 REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324 (355)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhh
Confidence 00000 0000000 00000000 0001123457889999999999999
Q ss_pred CCCHHHHHH
Q 039137 895 RPTMKRVSQ 903 (912)
Q Consensus 895 RPt~~evl~ 903 (912)
|||++|+++
T Consensus 325 Rpt~~e~l~ 333 (355)
T 2eu9_A 325 RITLAEALL 333 (355)
T ss_dssp SCCHHHHTT
T ss_pred CcCHHHHhc
Confidence 999999874
No 284
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=1.2e-35 Score=332.42 Aligned_cols=251 Identities=20% Similarity=0.276 Sum_probs=196.4
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-----------CCccccEE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-----------HRNIVKFY 704 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-----------h~niv~l~ 704 (912)
.++|++.+.||+|+||+||+|++. +++.||||++... ....+.+.+|+.++++++ ||||++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~ 92 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 92 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCC
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----ccchhhhhHHHHHHHHhhcccccchhccccchHHHHH
Confidence 367999999999999999999875 7899999998632 224567889999999886 89999999
Q ss_pred EEEEcCC----eeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEc--
Q 039137 705 GFCSHPK----HSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLD-- 778 (912)
Q Consensus 705 ~~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~-- 778 (912)
+++...+ ..++||||+ +++|.+++.... ...+++.+++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 93 DHFNHKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEEEEEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred HHhhccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 9997654 789999999 889999985533 345899999999999999999999953 899999999999994
Q ss_pred ----CCCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhcccccc
Q 039137 779 ----LGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSS 854 (912)
Q Consensus 779 ----~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~ 854 (912)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||+.........
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CCCcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4447999999999876432 334578999999999999999999999999999999999999986322110000
Q ss_pred -ccchhh------------------------------------------hccCCCCCCChhhHHHHHHHHHHHHHcccCC
Q 039137 855 -SNMNIE------------------------------------------MLDSRLPYPSLHVQKKLMSIMQVAFSCLDQN 891 (912)
Q Consensus 855 -~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 891 (912)
...... ....... .....+..+.++|.+||+.|
T Consensus 246 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~d 321 (373)
T 1q8y_A 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK----FSKDEAKEISDFLSPMLQLD 321 (373)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTC----CCHHHHHHHHHHHGGGGCSS
T ss_pred hHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhccc----CCcchHHHHHHHHHHHhccC
Confidence 000000 0000001 11345677899999999999
Q ss_pred CCCCCCHHHHHH
Q 039137 892 PESRPTMKRVSQ 903 (912)
Q Consensus 892 P~~RPt~~evl~ 903 (912)
|++|||++|+++
T Consensus 322 P~~Rpt~~ell~ 333 (373)
T 1q8y_A 322 PRKRADAGGLVN 333 (373)
T ss_dssp TTTCBCHHHHHT
T ss_pred ccccCCHHHHhh
Confidence 999999999875
No 285
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.2e-35 Score=316.45 Aligned_cols=234 Identities=11% Similarity=0.041 Sum_probs=186.8
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|++. +++.||+|++....... ....+.+.+|+..++.++||||+++++++...+..|+
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLP-DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccC-HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 367999999999999999999986 58999999998654432 2355789999999999999999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
||||+++++|.+++... ....++.+|+.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 109 v~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 99999999999999331 35567899999999999999999 99999999999999999999998543
Q ss_pred CCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHH
Q 039137 796 PDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQK 875 (912)
Q Consensus 796 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (912)
|++ .++.++|||||||++|||++|+.||......... ...........+.+......
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 231 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL--APAERDTAGQPIEPADIDRD 231 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS--EECCBCTTSCBCCHHHHCTT
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh--HHHHHHhccCCCChhhcccC
Confidence 333 2688999999999999999999998632221100 00001111111111112223
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHHHHhh
Q 039137 876 KLMSIMQVAFSCLDQNPESRPTMKRVSQLLCEKI 909 (912)
Q Consensus 876 ~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~l 909 (912)
.+..+.+++.+||+.||++| |+.|+++.|++..
T Consensus 232 ~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~ 264 (286)
T 3uqc_A 232 IPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT 264 (286)
T ss_dssp SCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence 45668899999999999999 9999999998864
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7e-35 Score=322.72 Aligned_cols=306 Identities=28% Similarity=0.391 Sum_probs=185.4
Q ss_pred CCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccE
Q 039137 106 SSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQ 185 (912)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 185 (912)
..+++|++|++++|.+.. +| .+..+++|++|+|++|++++ +|. +..+++|++|++++|.+++ +| .++.+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 456777888888887764 33 37778888888888888764 444 7777888888888887773 33 5777777777
Q ss_pred EEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccC
Q 039137 186 LALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNEL 265 (912)
Q Consensus 186 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 265 (912)
|++++|.+++. |. +.++++|++|++++|.....++ .+..+++|++|++++|++.+..+ +..+++|+.|++++|.+
T Consensus 115 L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCc-hh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 77777777643 33 6677777777777775543333 36666666666666666654333 55666666666666666
Q ss_pred cccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccC
Q 039137 266 SGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDW 345 (912)
Q Consensus 266 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 345 (912)
++..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|++|
T Consensus 190 ~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L--------------- 248 (347)
T 4fmz_A 190 EDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWL--------------- 248 (347)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE---------------
T ss_pred ccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEE---------------
Confidence 54322 5555555555555555553322 4455555555555555544332 4444444444
Q ss_pred CCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcccccccccccc
Q 039137 346 GRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEY 425 (912)
Q Consensus 346 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 425 (912)
++++|.+++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|++++..|..+..+++|++
T Consensus 249 ---------~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 315 (347)
T 4fmz_A 249 ---------EIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTT 315 (347)
T ss_dssp ---------ECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSE
T ss_pred ---------ECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCE
Confidence 4444444432 2344555566666666655542 34556666666666666666666666666666666
Q ss_pred ccccCcccCccccccccccccccEEEecccccc
Q 039137 426 LDLSANNLSNFVPESLGSLVKLYYLNLSHNKLS 458 (912)
Q Consensus 426 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 458 (912)
|++++|++++..| +..+++|++|++++|+|+
T Consensus 316 L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 316 LFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEccCCccccccC--hhhhhccceeehhhhccc
Confidence 7777766666544 666667777777777664
No 287
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=326.95 Aligned_cols=253 Identities=21% Similarity=0.317 Sum_probs=180.0
Q ss_pred hcCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~l 715 (912)
.++|++.+.||+|+||.||+|+++ +++.||||++..... .....+.+.++..+++.++||||+++++++..++..++
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC--HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 367899999999999999999986 789999999875432 22233444555567888899999999999999999999
Q ss_pred EEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh-CCCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 716 IYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 716 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
||||+ ++.+..+... ....+++..++.++.|++.||+|||+ + +|+||||||+||+++.++.+||+|||++...
T Consensus 102 v~e~~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 175 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175 (318)
T ss_dssp EECCC-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC---
T ss_pred EEecc-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhc
Confidence 99999 4456555532 23568999999999999999999998 6 8999999999999999999999999999766
Q ss_pred CCCCCCccccccccccccccccc-----cCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 795 NPDSSNWSELAGTHGYVAPELAY-----TLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 795 ~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
.... ......+++.|+|||++. +..++.++||||||+++|||++|+.||..... .............+..
T Consensus 176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~~~~ 250 (318)
T 2dyl_A 176 VDDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEPPLL 250 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCCCCC
T ss_pred cCCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCCCCC
Confidence 4432 233457899999999984 45688999999999999999999999863111 0111111111111111
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
+ .....+..+.+++.+||+.||.+|||++|+++
T Consensus 251 ~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 251 P-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp C-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred C-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 00123456889999999999999999999876
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-34 Score=320.67 Aligned_cols=306 Identities=25% Similarity=0.344 Sum_probs=139.1
Q ss_pred cccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccc
Q 039137 153 IGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLF 232 (912)
Q Consensus 153 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 232 (912)
+..+++|++|++++|.+. .+|. ++.+++|++|++++|++++ +|. +.++++|++|++++|.+++ +| .+.++++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 345666666666666665 3432 5556666666666666553 222 5555555555555555542 11 344444444
Q ss_pred eeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEeccccc
Q 039137 233 DLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNY 312 (912)
Q Consensus 233 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 312 (912)
+|++++|++ ++..+ +..+++|++|++++|.....++ .+..+++|++|++++|.
T Consensus 114 ~L~l~~n~i------------------------~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~ 166 (347)
T 4fmz_A 114 ELYLNEDNI------------------------SDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESK 166 (347)
T ss_dssp EEECTTSCC------------------------CCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSC
T ss_pred EEECcCCcc------------------------cCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCC
Confidence 444444444 43211 3344444444444443222221 24444444444444444
Q ss_pred ccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCcc
Q 039137 313 LTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQ 392 (912)
Q Consensus 313 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~ 392 (912)
+++..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|++++..+
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-- 238 (347)
T 4fmz_A 167 VKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-- 238 (347)
T ss_dssp CCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--
T ss_pred cCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--
Confidence 443222 3444444444444444433222 3344444444444444443222 3444445555555554443222
Q ss_pred ccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccc
Q 039137 393 LGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLS 472 (912)
Q Consensus 393 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 472 (912)
+..+++|++|++++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 314 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCS
T ss_pred hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCC
Confidence 44444444444444444432 2344444444444444444442 2344444444444444444444444444444444
Q ss_pred eeeccccccCcccccccccccccccccccCccc
Q 039137 473 ELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 505 (912)
Q Consensus 473 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l 505 (912)
+|++++|++++..| +..+++|+.|++++|+|
T Consensus 315 ~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp EEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred EEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 44444444444333 44444444444444444
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9e-35 Score=350.03 Aligned_cols=242 Identities=25% Similarity=0.352 Sum_probs=196.7
Q ss_pred hcCCCCCceeeecCceEEEEEEeC--CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEcCCe--
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVP--SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKH-- 712 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~-- 712 (912)
.++|++.+.||+|+||+||+|.+. +++.||||++.... .....+.+.+|+++++.++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 155 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHG 155 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTS
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCC
Confidence 368999999999999999999875 68999999986432 22356678999999999999999999999987665
Q ss_pred ---eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 713 ---SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 713 ---~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
.|+||||+++++|.+++.. .+++.+++.|+.||+.||+|||++ +|+||||||+||+++.+ .+||+|||
T Consensus 156 ~~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 156 DPVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp CEEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred CceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 6999999999999987732 689999999999999999999999 99999999999999986 89999999
Q ss_pred cccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCCCCC
Q 039137 790 IAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYP 869 (912)
Q Consensus 790 la~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (912)
+++..... ....||+.|+|||++.+. ++.++|||||||++|+|++|..||..... ...+ .
T Consensus 227 ~a~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~--------------~~~~-~ 286 (681)
T 2pzi_A 227 AVSRINSF----GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV--------------DGLP-E 286 (681)
T ss_dssp TCEETTCC----SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC--------------SSCC-T
T ss_pred cchhcccC----CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc--------------cccc-c
Confidence 99876543 445799999999998765 48899999999999999999988752110 0011 1
Q ss_pred ChhhHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHHHHhhh
Q 039137 870 SLHVQKKLMSIMQVAFSCLDQNPESRP-TMKRVSQLLCEKIF 910 (912)
Q Consensus 870 ~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~l~ 910 (912)
..........+.++|.+||+.||++|| +++++.+.|...+.
T Consensus 287 ~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 328 (681)
T 2pzi_A 287 DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR 328 (681)
T ss_dssp TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence 112223446788999999999999999 56777777766553
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-34 Score=311.74 Aligned_cols=231 Identities=21% Similarity=0.332 Sum_probs=181.0
Q ss_pred hcCCCCC-ceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHH-hhcCCCccccEEEEEEc----
Q 039137 637 TNDFNAE-HCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQAL-TEIRHRNIVKFYGFCSH---- 709 (912)
Q Consensus 637 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l-~~l~h~niv~l~~~~~~---- 709 (912)
.++|.+. +.||+|+||.||+|.+. +++.||+|++.. ...+.+|++++ +..+||||+++++++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------CPKARREVELHWRASQCPHIVRIVDVYENLYAG 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETT
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc---------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCC
Confidence 3567776 78999999999999875 789999999852 23466888888 55589999999999976
Q ss_pred CCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcC---CCcEEEe
Q 039137 710 PKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDL---GYEAHVS 786 (912)
Q Consensus 710 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~ 786 (912)
....++||||+++|+|.+++.... ...+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 677899999999999999996532 34689999999999999999999999 9999999999999998 7889999
Q ss_pred ccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccchhccccccccchhhhccCCC
Q 039137 787 DFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRL 866 (912)
Q Consensus 787 Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 866 (912)
|||++.... +..++.++||||+||++|||++|+.||......... ............
T Consensus 163 Dfg~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~-~~~~~~~~~~~~ 219 (299)
T 3m2w_A 163 DFGFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS-PGMKTRIRMGQY 219 (299)
T ss_dssp CCTTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------CCSCCSSCTTCC
T ss_pred ccccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-HHHHHHHhhccc
Confidence 999987542 134678999999999999999999998532221110 001111111222
Q ss_pred CCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 867 PYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 867 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
..+.......+..+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 220 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2232222334567899999999999999999999986
No 291
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.8e-35 Score=318.32 Aligned_cols=252 Identities=30% Similarity=0.455 Sum_probs=202.2
Q ss_pred CCccEEEccCCcccc--cCCccccCCCCCcEEeccc-cccccccccccccccccceeecccccccCCCCccccCcccccE
Q 039137 109 PHLVYLDLYNNELFG--IIPPQISNLSNLEYLDFSA-NKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQ 185 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 185 (912)
.+++.|+|++|+++| .+|+.|+++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|.+++.+|..|+.+++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467888888888888 7888888888888888885 8888888888888888888888888888777877777777777
Q ss_pred EEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCcccccccccc-ccceeeecccc
Q 039137 186 LALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLT-NLRFLFLYHNE 264 (912)
Q Consensus 186 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~L~~N~ 264 (912)
|+|++|.+++.+|..+.++++|++|+|++|.+++.+|. .+..++ +|++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~------------------------~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD------------------------SYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCG------------------------GGGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCH------------------------HHhhhhhcCcEEECcCCe
Confidence 77777777766666666666666666666655554554 444444 56666666666
Q ss_pred CcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccccccc
Q 039137 265 LSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSD 344 (912)
Q Consensus 265 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 344 (912)
+++.+|..+..++ |++|++++|++++.+|..|..+++|+.|+|++|.+++.++. +..+++|++|+|++|++++..|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 6666666666665 77777777777777778888889999999999999977766 888999999999999999999999
Q ss_pred CCCCCCCCEEeccCCcccccccccccccccccEEEccCcc-ccC
Q 039137 345 WGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNY-IVG 387 (912)
Q Consensus 345 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~-l~~ 387 (912)
+..+++|+.|++++|++++.+|.. +.+++|+.|++++|. +.|
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 999999999999999999999987 889999999999998 554
No 292
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3e-37 Score=355.81 Aligned_cols=383 Identities=20% Similarity=0.128 Sum_probs=231.4
Q ss_pred CCccEEEccCCcccccCCcc-ccCCCCCcEEecccccccc----ccccccccccccceeecccccccCCCCcccc-Ccc-
Q 039137 109 PHLVYLDLYNNELFGIIPPQ-ISNLSNLEYLDFSANKLFG----QIPSGIGLLTHLTVLHISRNWLSGSIPHEVG-QLT- 181 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~-~~~l~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~- 181 (912)
++|++|||++|+++...... +..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+. .++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46788889888887544333 7788889999999888874 3567777788888888888888754443332 344
Q ss_pred ---cccEEEccCCcCCC----CCCccCCCCccceeeeeccCCCcCcccccccc-----ccccceeecccccccCc----c
Q 039137 182 ---VLNQLALDSNFLNG----SIPRSLGNLTHVVILYLYNNSFFGSIPQEIGN-----LKSLFDLELCINQLSGA----I 245 (912)
Q Consensus 182 ---~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~l~~n~l~~~----~ 245 (912)
+|++|+|++|+++. .+|..+.++++|++|+|++|.+++..+..+.. .++|++|++++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 58888888888773 45677777777777777777776544443322 34577777777766643 2
Q ss_pred ccccccccccceeeeccccCcccCCcccCC-----ccccchhhhccCccCCCCccccccccccceEecccccccCCCCcc
Q 039137 246 PLSISNLTNLRFLFLYHNELSGIIPQEIGN-----LKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISET 320 (912)
Q Consensus 246 p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 320 (912)
+..+..+++|++|++++|.+++..+..+.. .++|++|++++|.+++.... .++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--------------------DLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--------------------HHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--------------------HHHHH
Confidence 444555666666666666665433222221 23445555555544432100 02333
Q ss_pred cCCCCCccEEEccCCcCcccc-----cccCCCCCCCCEEeccCCccccc----ccccccccccccEEEccCccccCCCCc
Q 039137 321 FGTYPNLTFIDLSNNSFFGEI-----LSDWGRCPQLSLLDVSINNISGS----IPLEIGESLQLQYLDLSSNYIVGEIPT 391 (912)
Q Consensus 321 ~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~~~~L~~L~L~~N~l~~~~~~ 391 (912)
+..+++|++|+|++|.+.+.. +..+..+++|++|++++|+++.. ++..+..+++|++|+|++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 344445555555555443322 11222455555555555555532 344455556666666666666543333
Q ss_pred ccccc-----ccccEEEccCCcccCC----CccccccccccccccccCcccCccccccccc-----cccccEEEeccccc
Q 039137 392 QLGNI-----IYLNRLSLSGNKLSGC----IPRELGSLINLEYLDLSANNLSNFVPESLGS-----LVKLYYLNLSHNKL 457 (912)
Q Consensus 392 ~l~~l-----~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 457 (912)
.+... ++|++|++++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|++|+|++|++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 33322 4677777777777654 4555666677888888888777655544432 56888888888888
Q ss_pred cc----ccchhhhcccccceeeccccccCcccccccc-----cccccccccccCccccCCCcc
Q 039137 458 SQ----QIPIELDNLIHLSELDLSHNFLGEKISSRIC-----RMESLEKLNLSYNNLSGLIPR 511 (912)
Q Consensus 458 ~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~ls~N~l~~~~p~ 511 (912)
++ .+|..+..+++|++|+|++|+|++.....+. ...+|+.|++.++.+....++
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~ 445 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMED 445 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHH
Confidence 75 6777788888888888888888754322222 122455566655555544333
No 293
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=6.3e-34 Score=321.78 Aligned_cols=244 Identities=16% Similarity=0.117 Sum_probs=179.8
Q ss_pred cCCCCCceeeecCceEEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCC-Ccc---------cc----
Q 039137 638 NDFNAEHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH-RNI---------VK---- 702 (912)
Q Consensus 638 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h-~ni---------v~---- 702 (912)
.+|...+.||+|+||+||+|++. +|+.||||++........ ...+.+.+|+.+++.++| ++. +.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPS-NAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccH-HHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 45777899999999999999965 799999999874432221 235678899999999977 221 11
Q ss_pred --------EEEEEEc-----CCeeeEEEeecCCCChhhHhhc----cCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCe
Q 039137 703 --------FYGFCSH-----PKHSFIIYEYLESGSLDKILCN----DASAKELGWTQRLNVIKGVADALFYLHNNCFPPI 765 (912)
Q Consensus 703 --------l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 765 (912)
+..++.. ....+++|+++ +++|.+++.. ......+++..++.++.|++.||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 1111111 12356777765 5799988842 22345688899999999999999999999 99
Q ss_pred eecCCCCCCeEEcCCCcEEEeccccccccCCCCCCcccccccccccccccc----------ccCCCCcchhHHHHHHHHH
Q 039137 766 VHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELA----------YTLKVTEKCDVYSFGVLAL 835 (912)
Q Consensus 766 vH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~sDvwslG~vl~ 835 (912)
+||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 99999999999999999999999999865432 344567 999999998 5556889999999999999
Q ss_pred HHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 039137 836 EVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQNPESRPTMKRVSQ 903 (912)
Q Consensus 836 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 903 (912)
||++|+.||....... ........... .+..+.+++.+||+.||++||++.|+++
T Consensus 309 elltg~~Pf~~~~~~~-----~~~~~~~~~~~--------~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALG-----GSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGS-----CSGGGGSSCCC--------CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhh-----hHHHHHhhccc--------CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999986322111 11111111111 1255889999999999999999877743
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3e-33 Score=307.41 Aligned_cols=288 Identities=23% Similarity=0.280 Sum_probs=135.6
Q ss_pred CCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeec
Q 039137 134 NLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLY 213 (912)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 213 (912)
+|++++++++.++ .+|..+. ++|++|+|++|.+++..|..|+++++|++|++++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4666666666665 5555442 456666666666664445556666666666666666655555555555555555555
Q ss_pred cCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCc--ccCCcccCCccccchhhhccCccCC
Q 039137 214 NNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS--GIIPQEIGNLKKLNSLLLAKNHFRG 291 (912)
Q Consensus 214 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~~ 291 (912)
+|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 55555 3333332 44555555555554433344444555555555555443 1333333333 44444444444432
Q ss_pred CCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccc
Q 039137 292 TVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGE 371 (912)
Q Consensus 292 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (912)
+|..+. ++|++|++++|.+.+..+..+..+++|+.|++++|++.
T Consensus 187 -l~~~~~--------------------------~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~--------- 230 (332)
T 2ft3_A 187 -IPKDLP--------------------------ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR--------- 230 (332)
T ss_dssp -CCSSSC--------------------------SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC---------
T ss_pred -cCcccc--------------------------CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC---------
Confidence 222111 23333333333333333333333333333333333333
Q ss_pred cccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccc------cc
Q 039137 372 SLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGS------LV 445 (912)
Q Consensus 372 ~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~ 445 (912)
+..+..+..+++|+.|++++|+++ .+|..+..+++|++|++++|+++++.+..|.. .+
T Consensus 231 ---------------~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 294 (332)
T 2ft3_A 231 ---------------MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294 (332)
T ss_dssp ---------------CCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSC
T ss_pred ---------------cCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccc
Confidence 333333333334444444444443 33333444444444444444444443333332 24
Q ss_pred cccEEEecccccc--cccchhhhcccccceeeccccc
Q 039137 446 KLYYLNLSHNKLS--QQIPIELDNLIHLSELDLSHNF 480 (912)
Q Consensus 446 ~L~~L~Ls~N~l~--~~~~~~~~~l~~L~~L~Ls~N~ 480 (912)
.|+.|++++|++. +..|..|..+++|+.|++++|+
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5666666666665 4555666666666666666653
No 295
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=3.7e-37 Score=355.08 Aligned_cols=379 Identities=20% Similarity=0.137 Sum_probs=263.5
Q ss_pred CCCcEEeccccccccccccc-cccccccceeecccccccC----CCCccccCcccccEEEccCCcCCCCCCccC-CCCc-
Q 039137 133 SNLEYLDFSANKLFGQIPSG-IGLLTHLTVLHISRNWLSG----SIPHEVGQLTVLNQLALDSNFLNGSIPRSL-GNLT- 205 (912)
Q Consensus 133 ~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l~- 205 (912)
++|++|||++|+++...... +..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46788888888876543333 6777888888888888764 345556666677777777766654322222 1122
Q ss_pred ---cceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccC-----Ccc
Q 039137 206 ---HVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIG-----NLK 277 (912)
Q Consensus 206 ---~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~ 277 (912)
+|++|+|++|.++..-. ..+|..+..+++|++|+|++|.+++..+..+. ..+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~--------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGC--------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGH--------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCceeEEEccCCCCCHHHH--------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 35555555555542100 12344445555555555555554432222211 133
Q ss_pred ccchhhhccCccCCC----CccccccccccceEecccccccCCCCcccC-----CCCCccEEEccCCcCccc----cccc
Q 039137 278 KLNSLLLAKNHFRGT----VPKSFRNLTDLVKLRLNQNYLTGNISETFG-----TYPNLTFIDLSNNSFFGE----ILSD 344 (912)
Q Consensus 278 ~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~ 344 (912)
+|++|+|++|++++. ++..+..+++|++|++++|.++...+..+. ..++|++|+|++|.+++. ++..
T Consensus 143 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 466666666665542 244566677888888888877654444332 356899999999998774 4666
Q ss_pred CCCCCCCCEEeccCCcccccc-----cccccccccccEEEccCccccCC----CCccccccccccEEEccCCcccCCCcc
Q 039137 345 WGRCPQLSLLDVSINNISGSI-----PLEIGESLQLQYLDLSSNYIVGE----IPTQLGNIIYLNRLSLSGNKLSGCIPR 415 (912)
Q Consensus 345 ~~~l~~L~~L~Ls~N~l~~~~-----~~~~~~~~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~p~ 415 (912)
+..+++|++|++++|++.+.. +..+..+++|++|+|++|++++. ++..+..+++|++|++++|++++..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 778999999999999998543 22334578999999999999864 677788899999999999999866555
Q ss_pred ccccc-----cccccccccCcccCcc----ccccccccccccEEEecccccccccchhhhc-----ccccceeecccccc
Q 039137 416 ELGSL-----INLEYLDLSANNLSNF----VPESLGSLVKLYYLNLSHNKLSQQIPIELDN-----LIHLSELDLSHNFL 481 (912)
Q Consensus 416 ~~~~l-----~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l 481 (912)
.+... ++|++|+|++|.+++. ++..+..+++|++|+|++|++++..+..+.. .++|++|+|++|.+
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 55543 6999999999999875 4566777899999999999998776666654 67999999999999
Q ss_pred Cc----ccccccccccccccccccCccccCCCccccc-----ccccceEEEccCCcccc
Q 039137 482 GE----KISSRICRMESLEKLNLSYNNLSGLIPRCFE-----EMHGLLHIDISYNKLEG 531 (912)
Q Consensus 482 ~~----~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~-----~l~~L~~l~ls~N~l~~ 531 (912)
++ .++..+..+++|+.|++++|++++.....+. ....|+.|++.++.+..
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 86 7888899999999999999999865332222 23468888888887764
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.2e-33 Score=307.09 Aligned_cols=267 Identities=24% Similarity=0.297 Sum_probs=170.9
Q ss_pred ccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEcc
Q 039137 254 NLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLS 333 (912)
Q Consensus 254 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 333 (912)
+|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|++++|.++...+..+ ++|++|+++
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~---~~L~~L~l~ 131 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELRIH 131 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC---TTCCEEECC
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc---ccCCEEECC
Confidence 44445555555444444444555555555555555554444455555555555555555543222222 455555555
Q ss_pred CCcCcccccccCCCCCCCCEEeccCCccc--ccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccC
Q 039137 334 NNSFFGEILSDWGRCPQLSLLDVSINNIS--GSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSG 411 (912)
Q Consensus 334 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 411 (912)
+|++.+..+..+..+++|+.|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|++|++++|++++
T Consensus 132 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 207 (332)
T 2ft3_A 132 DNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQA 207 (332)
T ss_dssp SSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCC
T ss_pred CCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCc
Confidence 55555444444555555555555555553 2445555555 66777777777664 444433 577777788888877
Q ss_pred CCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccccccc
Q 039137 412 CIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICR 491 (912)
Q Consensus 412 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 491 (912)
..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..|+.
T Consensus 208 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~ 286 (332)
T 2ft3_A 208 IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCP 286 (332)
T ss_dssp CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSC
T ss_pred cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccc
Confidence 77777788888888888888888877777888888888888888887 67777888888888888888887777766665
Q ss_pred c------cccccccccCcccc--CCCcccccccccceEEEccCCc
Q 039137 492 M------ESLEKLNLSYNNLS--GLIPRCFEEMHGLLHIDISYNK 528 (912)
Q Consensus 492 l------~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 528 (912)
. .+|+.|++++|+++ +..|..|..++.|+.+++++|+
T Consensus 287 ~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 287 VGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 3 56788888888887 6677788888888888888774
No 297
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-34 Score=318.97 Aligned_cols=246 Identities=15% Similarity=0.142 Sum_probs=189.3
Q ss_pred hcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCC----CchHHHHHHHHHHHHHhhcC---------CCccccE
Q 039137 637 TNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPG----EMSFQQEEFLNEIQALTEIR---------HRNIVKF 703 (912)
Q Consensus 637 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~~~~~Ei~~l~~l~---------h~niv~l 703 (912)
.++|++.+.||+|+||+||+|++ +|+.||||++...... ......+.+.+|+.+++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46799999999999999999998 7899999999765422 11223467889999988885 8888888
Q ss_pred EEEEE------------------------------cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHH
Q 039137 704 YGFCS------------------------------HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADA 753 (912)
Q Consensus 704 ~~~~~------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 753 (912)
.+++. ..+..|+||||+++|++.+.+.+ ..+++.+++.++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 77753 26789999999999976666522 458999999999999999
Q ss_pred HHHHH-hCCCCCeeecCCCCCCeEEcCCC--------------------cEEEeccccccccCCCCCCcccccccccccc
Q 039137 754 LFYLH-NNCFPPIVHRDISSKNVLLDLGY--------------------EAHVSDFGIAKFLNPDSSNWSELAGTHGYVA 812 (912)
Q Consensus 754 L~~LH-~~~~~~ivH~Dlk~~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~a 812 (912)
|+||| ++ +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+|
T Consensus 174 L~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~a 245 (336)
T 2vuw_A 174 LAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMD 245 (336)
T ss_dssp HHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTC
T ss_pred HHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccC
Confidence 99999 88 999999999999999887 8999999999876532 3479999999
Q ss_pred ccccccCCCCcchhHHHHHHH-HHHHHhCCCCccchhccccccccchhhhccCCCCCCChhhHHHHHHHHHHHHHcccCC
Q 039137 813 PELAYTLKVTEKCDVYSFGVL-ALEVIKGKHPRDFLFEMSSSSSNMNIEMLDSRLPYPSLHVQKKLMSIMQVAFSCLDQN 891 (912)
Q Consensus 813 PE~~~~~~~~~~sDvwslG~v-l~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 891 (912)
||++.+.. +.++||||+|++ .+++++|..||........... ....................+.++.++|.+||+.|
T Consensus 246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTD-KMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHH-HHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHH-hhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 99998776 889999998777 7788899999853211000000 00001111122233345567888999999999976
Q ss_pred CCCCCCHHHHH
Q 039137 892 PESRPTMKRVS 902 (912)
Q Consensus 892 P~~RPt~~evl 902 (912)
|++|++
T Consensus 324 -----sa~e~l 329 (336)
T 2vuw_A 324 -----SATDLL 329 (336)
T ss_dssp -----SHHHHH
T ss_pred -----CHHHHH
Confidence 888776
No 298
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.1e-32 Score=302.74 Aligned_cols=291 Identities=20% Similarity=0.242 Sum_probs=149.5
Q ss_pred CCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeec
Q 039137 134 NLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLY 213 (912)
Q Consensus 134 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~ 213 (912)
+|++++++++.++ .+|..+. ++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 5677777777775 5665443 466777777777765555566666666666666666665556666666666666666
Q ss_pred cCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCC
Q 039137 214 NNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTV 293 (912)
Q Consensus 214 ~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 293 (912)
+|.++ .+|..+. ++|++|++++|++++..+..+.++++|++|++++|.++. .+..
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~ 163 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGIE 163 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGBC
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCcC
Confidence 66665 3343332 344444444444444444444444444444444444431 0133
Q ss_pred ccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccc
Q 039137 294 PKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESL 373 (912)
Q Consensus 294 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 373 (912)
+..|..+++|++|++++|.++......+ ++|++|++++|++.+..+..+..+++|+.|++++|++++..+..+..++
T Consensus 164 ~~~~~~l~~L~~L~l~~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 240 (330)
T 1xku_A 164 NGAFQGMKKLSYIRIADTNITTIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTP 240 (330)
T ss_dssp TTGGGGCTTCCEEECCSSCCCSCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGST
T ss_pred hhhccCCCCcCEEECCCCccccCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCC
Confidence 4444555555555555555543222111 4455555555555444444444444444444444444443333444444
Q ss_pred cccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccc------cccc
Q 039137 374 QLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGS------LVKL 447 (912)
Q Consensus 374 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L 447 (912)
+|++|+|++|+++ .+|..+.. +++|++|++++|+|+++.+..|.. .+.|
T Consensus 241 ~L~~L~L~~N~l~-~lp~~l~~------------------------l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l 295 (330)
T 1xku_A 241 HLRELHLNNNKLV-KVPGGLAD------------------------HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASY 295 (330)
T ss_dssp TCCEEECCSSCCS-SCCTTTTT------------------------CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCC
T ss_pred CCCEEECCCCcCc-cCChhhcc------------------------CCCcCEEECCCCcCCccChhhcCCcccccccccc
Confidence 4444444444444 33333444 444444444444444433333322 2556
Q ss_pred cEEEeccccccc--ccchhhhcccccceeeccccc
Q 039137 448 YYLNLSHNKLSQ--QIPIELDNLIHLSELDLSHNF 480 (912)
Q Consensus 448 ~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~ 480 (912)
+.|++++|++.. ..|..|..+.+++.++|++|+
T Consensus 296 ~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 296 SGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cceEeecCcccccccCccccccccceeEEEecccC
Confidence 666677766642 455666667777777777664
No 299
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.7e-32 Score=301.11 Aligned_cols=270 Identities=24% Similarity=0.256 Sum_probs=177.4
Q ss_pred cceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhc
Q 039137 206 HVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLA 285 (912)
Q Consensus 206 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 285 (912)
+|++|+|++|.+++..+..|+++++|++|++++|++++..|..|+++++|++|+|++|+++. +|..+. ++|++|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEECC
Confidence 34444444444443333344444444444444444444445555555555555555555552 333222 345555555
Q ss_pred cCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccc
Q 039137 286 KNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSI 365 (912)
Q Consensus 286 ~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 365 (912)
+|++++..+..|.++++|+.|++++|.++. .+..+..+..+++|+.|++++|+++. +
T Consensus 130 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------~~~~~~~~~~l~~L~~L~l~~n~l~~-l 186 (330)
T 1xku_A 130 ENEITKVRKSVFNGLNQMIVVELGTNPLKS----------------------SGIENGAFQGMKKLSYIRIADTNITT-I 186 (330)
T ss_dssp SSCCCBBCHHHHTTCTTCCEEECCSSCCCG----------------------GGBCTTGGGGCTTCCEEECCSSCCCS-C
T ss_pred CCcccccCHhHhcCCccccEEECCCCcCCc----------------------cCcChhhccCCCCcCEEECCCCcccc-C
Confidence 555554444445555555555555555432 11334444555555555555555552 3
Q ss_pred cccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccc
Q 039137 366 PLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLV 445 (912)
Q Consensus 366 ~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 445 (912)
|..+. ++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|++|+|++|+++. +|..+..++
T Consensus 187 ~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-lp~~l~~l~ 263 (330)
T 1xku_A 187 PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHK 263 (330)
T ss_dssp CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCS
T ss_pred Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCcc-CChhhccCC
Confidence 33332 578888888888887777888888899999999999988777789999999999999999985 678899999
Q ss_pred cccEEEecccccccccchhhhc------ccccceeeccccccCc--ccccccccccccccccccCcc
Q 039137 446 KLYYLNLSHNKLSQQIPIELDN------LIHLSELDLSHNFLGE--KISSRICRMESLEKLNLSYNN 504 (912)
Q Consensus 446 ~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~ls~N~ 504 (912)
+|++|+|++|+|++..+..|.. .+.|+.|++++|.+.. ..|..|..+.+|+.++|++|+
T Consensus 264 ~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 264 YIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 9999999999999877777754 3789999999999974 667889999999999999995
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.98 E-value=5.6e-35 Score=348.10 Aligned_cols=448 Identities=15% Similarity=0.100 Sum_probs=329.1
Q ss_pred CCccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcc---cccCCcccc------------CCCCCc
Q 039137 72 PCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNEL---FGIIPPQIS------------NLSNLE 136 (912)
Q Consensus 72 ~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l---~~~~p~~~~------------~l~~L~ 136 (912)
|++|.++.+... +.+.+ ... .+...+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~~-~~l~~--~~~--~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR-EHVTM--ALC--YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC-CEEEE--SCG--GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc-cEEEE--eec--cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 558998865422 22222 111 1112233456788999999988642 245555444 789999
Q ss_pred EEeccccccccccccccccc--cccceeeccccc-ccC-CCCccccCcccccEEEccCCcCCCC----CCccCCCCccce
Q 039137 137 YLDFSANKLFGQIPSGIGLL--THLTVLHISRNW-LSG-SIPHEVGQLTVLNQLALDSNFLNGS----IPRSLGNLTHVV 208 (912)
Q Consensus 137 ~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~~n~-l~~-~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~ 208 (912)
+|+|++|.+++..+..++.+ .+|++|+|++|. ++. .++..+..+++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 99999999988777777774 459999999986 221 1333345789999999999998766 444556788999
Q ss_pred eeeeccCCCc----CccccccccccccceeecccccccCccccccccccccceeeeccccCc---ccCCcccCCccccch
Q 039137 209 ILYLYNNSFF----GSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS---GIIPQEIGNLKKLNS 281 (912)
Q Consensus 209 ~L~L~~n~l~----~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~~~~l~~l~~L~~ 281 (912)
+|++++|.++ +.++..+.++++|+.|++++|.+.+ +|..+..+++|+.|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 9999999997 3455567789999999999999985 7788999999999999864433 334456788889999
Q ss_pred hhhccCccCCCCccccccccccceEecccccccCCCC-cccCCCCCccEEEccCCcCccc-ccccCCCCCCCCEEecc--
Q 039137 282 LLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNIS-ETFGTYPNLTFIDLSNNSFFGE-ILSDWGRCPQLSLLDVS-- 357 (912)
Q Consensus 282 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls-- 357 (912)
|+++++.. +.+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++ +.+... .+..+..+++|++|+++
T Consensus 275 L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g 352 (592)
T 3ogk_B 275 LGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERG 352 (592)
T ss_dssp EEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECC
T ss_pred cCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecC
Confidence 99988644 4678888899999999999999765433 446889999999999 444433 33344678999999999
Q ss_pred ---------CCcccccc-cccccccccccEEEccCccccCCCCccccc-cccccEEEcc----CCcccCC-----Ccccc
Q 039137 358 ---------INNISGSI-PLEIGESLQLQYLDLSSNYIVGEIPTQLGN-IIYLNRLSLS----GNKLSGC-----IPREL 417 (912)
Q Consensus 358 ---------~N~l~~~~-~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~-l~~L~~L~L~----~N~l~~~-----~p~~~ 417 (912)
.|.+++.. +.....+++|++|+++.|++++..+..+.. +++|+.|+++ .|++++. ++..+
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~ 432 (592)
T 3ogk_B 353 ADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLL 432 (592)
T ss_dssp CCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHH
T ss_pred ccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHH
Confidence 36666432 223455789999999999998877766665 8889999996 7788764 34446
Q ss_pred ccccccccccccCc--ccCccccccccc-cccccEEEeccccccc-ccchhhhcccccceeeccccccCcc-cccccccc
Q 039137 418 GSLINLEYLDLSAN--NLSNFVPESLGS-LVKLYYLNLSHNKLSQ-QIPIELDNLIHLSELDLSHNFLGEK-ISSRICRM 492 (912)
Q Consensus 418 ~~l~~L~~L~Ls~N--~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l 492 (912)
..+++|++|++++| .+++..+..+.. +++|++|+|++|++++ .++..+.++++|++|+|++|.|++. ++..+..+
T Consensus 433 ~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l 512 (592)
T 3ogk_B 433 IGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKL 512 (592)
T ss_dssp HHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHC
T ss_pred HhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhc
Confidence 77899999999754 366655555543 7889999999999976 3455668889999999999998755 34445678
Q ss_pred cccccccccCccccCCCccc-ccccccceEEEccCC
Q 039137 493 ESLEKLNLSYNNLSGLIPRC-FEEMHGLLHIDISYN 527 (912)
Q Consensus 493 ~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~l~ls~N 527 (912)
++|+.|++++|++++..... ...++.+....+..+
T Consensus 513 ~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 513 PSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp SSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred CccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 99999999999988663333 345677776666554
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=294.93 Aligned_cols=260 Identities=18% Similarity=0.159 Sum_probs=142.1
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..+..++.+++|++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 35666677666666555556666666666666666666555566666666666666666666433333556666666666
Q ss_pred cCCcCCCCCC-ccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcc
Q 039137 189 DSNFLNGSIP-RSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSG 267 (912)
Q Consensus 189 ~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 267 (912)
++|++++..+ ..+.++++|++|++++|. .+++..|..|..+++|++|++++|++++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----------------------~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 188 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMD-----------------------TFTKIQRKDFAGLTFLEELEIDASDLQS 188 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESS-----------------------SCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCc-----------------------cccccCHHHccCCCCCCEEECCCCCcCc
Confidence 6666552222 245555555555555542 2332333444555555555555555555
Q ss_pred cCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccC---CCCCccEEEccCCcCccccccc
Q 039137 268 IIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFG---TYPNLTFIDLSNNSFFGEILSD 344 (912)
Q Consensus 268 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~~~~ 344 (912)
..|..+.++++|++|++++|++....+..+..+++|+.|++++|.+++..+..+. ..+.++.++|+++.+.+
T Consensus 189 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~----- 263 (353)
T 2z80_A 189 YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD----- 263 (353)
T ss_dssp ECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCH-----
T ss_pred cCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccC-----
Confidence 5555555555555555555555432222334456666666666666554333221 22334444444443322
Q ss_pred CCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCcc-ccccccccEEEccCCcccCC
Q 039137 345 WGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQ-LGNIIYLNRLSLSGNKLSGC 412 (912)
Q Consensus 345 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~-l~~l~~L~~L~L~~N~l~~~ 412 (912)
|.+. .+|..+..+++|++|+|++|+++ .+|.. +.++++|++|++++|.+.+.
T Consensus 264 --------------~~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 264 --------------ESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp --------------HHHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred --------------cchh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 1111 34555666667777777777776 34443 46677777777777777643
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.9e-31 Score=287.05 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=181.1
Q ss_pred CccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEecccccccc--ccc
Q 039137 73 CAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFG--QIP 150 (912)
Q Consensus 73 C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~--~~p 150 (912)
|.|.+|.|+..+ ++.+ +. .-.++|++|+|++|+++...+..|.++++|++|+|++|+++. .+|
T Consensus 7 C~~~~l~c~~~~-l~~i------------p~--~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 71 (306)
T 2z66_A 7 CSGTEIRCNSKG-LTSV------------PT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCS 71 (306)
T ss_dssp EETTEEECCSSC-CSSC------------CS--CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEE
T ss_pred eCCCEEEcCCCC-cccC------------CC--CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcc
Confidence 899999997532 1111 11 123689999999999986555568999999999999999873 346
Q ss_pred cccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCC-ccCCCCccceeeeeccCCCcCcccccccccc
Q 039137 151 SGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIP-RSLGNLTHVVILYLYNNSFFGSIPQEIGNLK 229 (912)
Q Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 229 (912)
..+..+++|++|+|++|.++ .+|..+..+++|++|++++|++++..+ ..+.++++|++|++++|.+.+..|..+.+++
T Consensus 72 ~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 150 (306)
T 2z66_A 72 QSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 150 (306)
T ss_dssp HHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCT
T ss_pred cccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCc
Confidence 77788999999999999998 678888889999999999998886554 5778888888888888888777777777777
Q ss_pred ccceeecccccccC-ccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEec
Q 039137 230 SLFDLELCINQLSG-AIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRL 308 (912)
Q Consensus 230 ~L~~L~l~~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 308 (912)
+|++|++++|++++ ..|..+..+++|++|+|++|++++..|..+.++++|++|+|++|++++..+..|..+++|++|++
T Consensus 151 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 230 (306)
T 2z66_A 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDY 230 (306)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEEC
T ss_pred CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeEC
Confidence 77777777777765 46666777777777777777777666666666666666666666666555555555666666666
Q ss_pred ccccccCCCCcccCCCC-CccEEEccCCcCc
Q 039137 309 NQNYLTGNISETFGTYP-NLTFIDLSNNSFF 338 (912)
Q Consensus 309 ~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~ 338 (912)
++|.+++..+..+..++ +|++|+|++|.+.
T Consensus 231 ~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 231 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp TTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred CCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 66666555555555553 5555555555554
No 303
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=5.7e-33 Score=330.70 Aligned_cols=407 Identities=14% Similarity=0.083 Sum_probs=317.8
Q ss_pred cCCccccCCCCCcEEecccccc---ccccccccc------------cccccceeecccccccCCCCccccCc--ccccEE
Q 039137 124 IIPPQISNLSNLEYLDFSANKL---FGQIPSGIG------------LLTHLTVLHISRNWLSGSIPHEVGQL--TVLNQL 186 (912)
Q Consensus 124 ~~p~~~~~l~~L~~L~Ls~n~l---~~~~p~~~~------------~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~~L 186 (912)
.++..+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.+ .+|++|
T Consensus 64 ~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L 143 (592)
T 3ogk_B 64 TPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETL 143 (592)
T ss_dssp CHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEE
T ss_pred ChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEE
Confidence 4455677899999999988542 234554444 78999999999999887777777764 459999
Q ss_pred EccCCc-CCC-CCCccCCCCccceeeeeccCCCcCc----cccccccccccceeeccccccc----Cccccccccccccc
Q 039137 187 ALDSNF-LNG-SIPRSLGNLTHVVILYLYNNSFFGS----IPQEIGNLKSLFDLELCINQLS----GAIPLSISNLTNLR 256 (912)
Q Consensus 187 ~l~~n~-l~~-~~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~l~~n~l~----~~~p~~~~~l~~L~ 256 (912)
+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|+.|+++.|+++ +.++..+.++++|+
T Consensus 144 ~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~ 223 (592)
T 3ogk_B 144 KLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLV 223 (592)
T ss_dssp EEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCC
T ss_pred ECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCc
Confidence 999987 221 1223334789999999999998766 4456678899999999999997 34566677899999
Q ss_pred eeeeccccCcccCCcccCCccccchhhhccCccC---CCCccccccccccceEecccccccCCCCcccCCCCCccEEEcc
Q 039137 257 FLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFR---GTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLS 333 (912)
Q Consensus 257 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 333 (912)
.|++++|.+.+ +|..+.++++|++|+++.+... +..+..+..+++|+.|+++++.. +.++..+..+++|++|+|+
T Consensus 224 ~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls 301 (592)
T 3ogk_B 224 SVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLL 301 (592)
T ss_dssp EEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEET
T ss_pred EEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecC
Confidence 99999999986 6788899999999999864433 34456678889999999998643 4567788889999999999
Q ss_pred CCcCccccc-ccCCCCCCCCEEeccCCcccccccccccccccccEEEcc-----------CccccCC-CCcccccccccc
Q 039137 334 NNSFFGEIL-SDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLS-----------SNYIVGE-IPTQLGNIIYLN 400 (912)
Q Consensus 334 ~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~-----------~N~l~~~-~~~~l~~l~~L~ 400 (912)
+|.+++... ..+..+++|+.|+++++...+.++..+..+++|++|+|+ .|.+++. ++.....+++|+
T Consensus 302 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 381 (592)
T 3ogk_B 302 YALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELE 381 (592)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCS
T ss_pred CCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCe
Confidence 999876555 346889999999999443333445555678899999999 3666643 223345689999
Q ss_pred EEEccCCcccCCCcccccc-cccccccccc----CcccCcc-----ccccccccccccEEEeccc--ccccccchhhhc-
Q 039137 401 RLSLSGNKLSGCIPRELGS-LINLEYLDLS----ANNLSNF-----VPESLGSLVKLYYLNLSHN--KLSQQIPIELDN- 467 (912)
Q Consensus 401 ~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~~~~~~~l~~L~~L~Ls~N--~l~~~~~~~~~~- 467 (912)
+|+++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|++|+|++| .+++..+..+..
T Consensus 382 ~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~ 461 (592)
T 3ogk_B 382 YMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQY 461 (592)
T ss_dssp EEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHS
T ss_pred EEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHh
Confidence 9999999999877777766 8999999996 7788874 3334677899999999854 477666666654
Q ss_pred ccccceeeccccccCcc-cccccccccccccccccCccccCC-CcccccccccceEEEccCCccccC
Q 039137 468 LIHLSELDLSHNFLGEK-ISSRICRMESLEKLNLSYNNLSGL-IPRCFEEMHGLLHIDISYNKLEGQ 532 (912)
Q Consensus 468 l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~l~ls~N~l~~~ 532 (912)
+++|++|+|++|++++. ++..+..+++|++|++++|++++. ++.....+++|+.|++++|+++..
T Consensus 462 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 462 SPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 89999999999999874 455567899999999999999765 445567899999999999998753
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.9e-30 Score=287.51 Aligned_cols=261 Identities=20% Similarity=0.240 Sum_probs=116.7
Q ss_pred ccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEcc
Q 039137 254 NLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLS 333 (912)
Q Consensus 254 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 333 (912)
+|++|++++|++++..+..|.++++|++|++++|++++..|..|.++++|++|++++|.+++..+..|+.+++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 34444444444443333344444444444444444443333444444444444444444443333334444444444444
Q ss_pred CCcCccccc-ccCCCCCCCCEEeccCC-cccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccC
Q 039137 334 NNSFFGEIL-SDWGRCPQLSLLDVSIN-NISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSG 411 (912)
Q Consensus 334 ~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 411 (912)
+|++.+... ..+..+++|+.|++++| .+.+..+..++.+++|++|++++|++++..|..+..+++|++|++++|+++.
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 444443222 23444444444444444 2333333444445555555555555554444555555555555555555542
Q ss_pred CCccccccccccccccccCcccCcccccccc---ccccccEEEecccccccccchhhhcccccceeeccccccCcccccc
Q 039137 412 CIPRELGSLINLEYLDLSANNLSNFVPESLG---SLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSR 488 (912)
Q Consensus 412 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 488 (912)
..+..+..+++|++|++++|.+++..+..+. ....++.++|++|.+++. .+ ..+|..
T Consensus 213 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~-------------------~l-~~l~~~ 272 (353)
T 2z80_A 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE-------------------SL-FQVMKL 272 (353)
T ss_dssp HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHH-------------------HH-HHHHHH
T ss_pred chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCc-------------------ch-hhhHHH
Confidence 2222233345555555555555544333222 123344444444444321 11 023444
Q ss_pred cccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 489 ICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 489 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
+..+++|+.|++++|+++.+.+..|..+++|++|++++|++.|..|
T Consensus 273 l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 273 LNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred HhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 5555555555555555554433334555566666666666655443
No 305
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.5e-29 Score=274.64 Aligned_cols=241 Identities=22% Similarity=0.211 Sum_probs=135.5
Q ss_pred CCCCccceeeeeccCCCcC--ccccccccccccceeecccccccCccccccccccccceeeeccccCcccCC-cccCCcc
Q 039137 201 LGNLTHVVILYLYNNSFFG--SIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIP-QEIGNLK 277 (912)
Q Consensus 201 ~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~ 277 (912)
|.++++|++|+|++|.++. ..|..+..+++|++|++++|+++ .+|..+..+++|++|++++|++++..+ ..+.+++
T Consensus 48 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 126 (306)
T 2z66_A 48 FDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLR 126 (306)
T ss_dssp TTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCT
T ss_pred hhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhcc
Confidence 3444444444444444431 12344445555666666666555 345556666666666666666665443 4556666
Q ss_pred ccchhhhccCccCCCCccccccccccceEecccccccC-CCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEec
Q 039137 278 KLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTG-NISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDV 356 (912)
Q Consensus 278 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 356 (912)
+|++|++++|.+.+..+..|..+++|++|++++|.+++ ..|..+..+++|++|+|++|++++..+..+..+++|+.|++
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 66666666666665555666666666666666666654 45556666666666666666666655666666666666666
Q ss_pred cCCcccccccccccccccccEEEccCccccCCCCccccccc-cccEEEccCCcccCCCc--cccccccccccccccCccc
Q 039137 357 SINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNII-YLNRLSLSGNKLSGCIP--RELGSLINLEYLDLSANNL 433 (912)
Q Consensus 357 s~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l 433 (912)
++|++++..+..+..+++|++|+|++|++++..|..+..++ +|++|+|++|.+++..+ .....+...+.+.+..+.+
T Consensus 207 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~ 286 (306)
T 2z66_A 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 286 (306)
T ss_dssp TTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGC
T ss_pred CCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcccccc
Confidence 66666655555555666666666666666665565565553 56666666666653211 1112233344444444454
Q ss_pred Ccccccccc
Q 039137 434 SNFVPESLG 442 (912)
Q Consensus 434 ~~~~~~~~~ 442 (912)
....|..+.
T Consensus 287 ~C~~p~~~~ 295 (306)
T 2z66_A 287 ECATPSDKQ 295 (306)
T ss_dssp BEEESGGGT
T ss_pred ccCCchhhC
Confidence 444444443
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.6e-29 Score=274.75 Aligned_cols=298 Identities=19% Similarity=0.211 Sum_probs=241.0
Q ss_pred HHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCCCccceeEecCC---CCeEEEeeccccccccccccccCCCCCccEE
Q 039137 38 EAHALVKWKASLEVHSRSLLHSWSLSSVNATKISPCAWSGIFCNHA---ERVVGINLTSISLNGTLLEFSFSSFPHLVYL 114 (912)
Q Consensus 38 ~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~C~w~gv~c~~~---~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L 114 (912)
.+++..+..++-..++...|..|..+- ..|+|.|.++-|... ..+. ...|
T Consensus 13 ~~~~~~~~~~~~~~~~~~aLl~~k~~~----~~~~~~~~~~w~~~~~~~~~~~-------~~~g---------------- 65 (328)
T 4fcg_A 13 GRENLYFQGSTALRPYHDVLSQWQRHY----NADRNRWHSAWRQANSNNPQIE-------TRTG---------------- 65 (328)
T ss_dssp ----CCCC--CCCCCHHHHHHHHHHHH----HHCCTTHHHHHHHHTTTCTTSC-------CSHH----------------
T ss_pred cccceeeeccccCchHHHHHHHHHHhc----cCCchhhhhhhccccccccccc-------ccCC----------------
Confidence 444444444433345667788897431 247899998888321 1111 0001
Q ss_pred EccCCcccccCCccc--cCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCc
Q 039137 115 DLYNNELFGIIPPQI--SNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNF 192 (912)
Q Consensus 115 ~L~~n~l~~~~p~~~--~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 192 (912)
.... .++..+ ...+++++|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..++.+++|++|+|++|+
T Consensus 66 ----~~~~-~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~ 138 (328)
T 4fcg_A 66 ----RALK-ATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNP 138 (328)
T ss_dssp ----HHHH-HHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCC
T ss_pred ----cchh-hhHHHHhcccccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCc
Confidence 0011 122222 23578999999999997 88999999999999999999999 899999999999999999999
Q ss_pred CCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcc
Q 039137 193 LNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQE 272 (912)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 272 (912)
++ .+|..++++++|++|+|++|.+.+.+|..++.. ..+..+.++++|++|+|++|+++ .+|..
T Consensus 139 l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~ 201 (328)
T 4fcg_A 139 LR-ALPASIASLNRLRELSIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPAS 201 (328)
T ss_dssp CC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGG
T ss_pred cc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHh
Confidence 98 888889999999999999988888888766541 12345778999999999999999 68889
Q ss_pred cCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCC
Q 039137 273 IGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLS 352 (912)
Q Consensus 273 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 352 (912)
++++++|++|+|++|++++ +|..+..+++|++|+|++|.+.+.+|..|+.+++|++|+|++|.+.+.+|..++.+++|+
T Consensus 202 l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~ 280 (328)
T 4fcg_A 202 IANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLE 280 (328)
T ss_dssp GGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCC
T ss_pred hcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCC
Confidence 9999999999999999995 666899999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCcccccccccccccccccEEEccCccccC
Q 039137 353 LLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVG 387 (912)
Q Consensus 353 ~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~ 387 (912)
.|++++|++.+.+|..++.+++|+.+++..|.+..
T Consensus 281 ~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 281 KLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQ 315 (328)
T ss_dssp EEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSCC
T ss_pred EEeCCCCCchhhccHHHhhccCceEEeCCHHHHHH
Confidence 99999999999999999999999999999887753
No 307
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.7e-30 Score=282.48 Aligned_cols=250 Identities=21% Similarity=0.210 Sum_probs=126.7
Q ss_pred ccCCCCCcEEeccccccccccccccccccccceeecccccc-cCCCCcccc-------CcccccEEEccCCcCCCCCCcc
Q 039137 129 ISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWL-SGSIPHEVG-------QLTVLNQLALDSNFLNGSIPRS 200 (912)
Q Consensus 129 ~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l-~~~~p~~~~-------~l~~L~~L~l~~n~l~~~~p~~ 200 (912)
++..++|++|++++|.+ .+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34445556666666666 455544433 66666666665 334444444 4555666666666655555555
Q ss_pred C--CCCccceeeeeccCCCcCccccccccc-----cccceeecccccccCccccccccccccceeeeccccCccc--CCc
Q 039137 201 L--GNLTHVVILYLYNNSFFGSIPQEIGNL-----KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGI--IPQ 271 (912)
Q Consensus 201 ~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~~~ 271 (912)
+ .++++|++|+|++|++++. |..++++ ++|++|++++|++++..|..|+++++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 4 5566666666666666544 5555544 5555555555555544445555555555555555554432 111
Q ss_pred cc--CCccccchhhhccCccCCC---CccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCC
Q 039137 272 EI--GNLKKLNSLLLAKNHFRGT---VPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWG 346 (912)
Q Consensus 272 ~l--~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 346 (912)
.+ .++++|++|+|++|++++. ....+..+++|++|+|++|.+++.++ ...+.
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----------------------~~~~~ 250 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAG-----------------------APSCD 250 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCC-----------------------CSCCC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccc-----------------------hhhhh
Confidence 22 3444444444444444411 11122333444444444444443332 12233
Q ss_pred CCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccC
Q 039137 347 RCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSG 411 (912)
Q Consensus 347 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 411 (912)
.+++|+.|++++|+|+ .+|..+. ++|++|+|++|+|++. |. +..+++|++|++++|++++
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 3444555555555554 4444443 5566666666666644 43 5566666666666666653
No 308
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=3.8e-29 Score=293.87 Aligned_cols=268 Identities=26% Similarity=0.317 Sum_probs=165.3
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEcc
Q 039137 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALD 189 (912)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 189 (912)
.++.|++++|+++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 3677888888888 6777665 78888899888887 5666 5678888888888887 5665 56778888888
Q ss_pred CCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccC
Q 039137 190 SNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGII 269 (912)
Q Consensus 190 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 269 (912)
+|++++ +|. .+++|+.|++++|++++ +|.. +++|++|++++|++++ +|. .+++|+.|++++|++++ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 888774 444 45667777777777763 4432 3566666666666653 232 23455566666666554 2
Q ss_pred CcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCC
Q 039137 270 PQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCP 349 (912)
Q Consensus 270 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 349 (912)
| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++.. +. .++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-------------------------~~---~~~ 221 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-------------------------PA---LPS 221 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-------------------------CC---CCT
T ss_pred c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-------------------------CC---CCC
Confidence 3 223445555555555543 2221 23444444444444422 11 134
Q ss_pred CCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCcccccccccccccccc
Q 039137 350 QLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLS 429 (912)
Q Consensus 350 ~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 429 (912)
+|+.|++++|+|++ +| ..+++|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 55555555555553 33 23456666666666666 3443 4556777777777777 556667777777777777
Q ss_pred CcccCccccccccccc
Q 039137 430 ANNLSNFVPESLGSLV 445 (912)
Q Consensus 430 ~N~l~~~~~~~~~~l~ 445 (912)
+|.+++..|..+..++
T Consensus 293 ~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 293 GNPLSERTLQALREIT 308 (622)
T ss_dssp SCCCCHHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhcc
Confidence 7777776666655544
No 309
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.1e-28 Score=283.05 Aligned_cols=249 Identities=24% Similarity=0.258 Sum_probs=147.5
Q ss_pred cceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccC
Q 039137 255 LRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSN 334 (912)
Q Consensus 255 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 334 (912)
...++++++.++. +|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 56 ~~~v~c~~~~l~~-iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLSE-VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcCc-cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 4567777777773 555443 4677777777777766666777777777777777777766666666677777777777
Q ss_pred CcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCc
Q 039137 335 NSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP 414 (912)
Q Consensus 335 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 414 (912)
|+++...+..|..+++|++|++++|++....+..+..+++|++|+|++|...+.+ .+
T Consensus 133 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i-----------------------~~ 189 (452)
T 3zyi_A 133 NWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYI-----------------------SE 189 (452)
T ss_dssp SCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEE-----------------------CT
T ss_pred CcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCcccc-----------------------Ch
Confidence 7666655555666666666666666666444445555556666666553222222 22
Q ss_pred cccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccc
Q 039137 415 RELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMES 494 (912)
Q Consensus 415 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 494 (912)
..|..+++|++|+|++|+++++ | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++
T Consensus 190 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 267 (452)
T 3zyi_A 190 GAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLAS 267 (452)
T ss_dssp TTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCC
Confidence 2344444455555555555442 2 2445555555555555555555555555555555555555555555555555555
Q ss_pred cccccccCccccCCCcccccccccceEEEccCCcccc
Q 039137 495 LEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 495 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 531 (912)
|+.|+|++|+|++..+..|..+++|+.|++++|+|.|
T Consensus 268 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 268 LVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 5555666665555555555556666666666666555
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-29 Score=275.95 Aligned_cols=250 Identities=25% Similarity=0.288 Sum_probs=155.9
Q ss_pred CCCCccceeeeeccCCCcCccccccccccccceeecccccc-cCccccccc-------cccccceeeeccccCcccCCcc
Q 039137 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQL-SGAIPLSIS-------NLTNLRFLFLYHNELSGIIPQE 272 (912)
Q Consensus 201 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~ 272 (912)
+++.++|++|++++|.+ .+|..+... |+.|++++|++ .+.+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45566788888888888 567666554 78888888888 345565554 6788888888888888777776
Q ss_pred c--CCccccchhhhccCccCCCCccccccc-----cccceEecccccccCCCCcccCCCCCccEEEccCCcCccc--ccc
Q 039137 273 I--GNLKKLNSLLLAKNHFRGTVPKSFRNL-----TDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGE--ILS 343 (912)
Q Consensus 273 l--~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~ 343 (912)
+ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|+.+++|++|+|++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 7788888888888888866 7777776 7777777777777777777777777777777777776554 222
Q ss_pred cC--CCCCCCCEEeccCCccccc--cc-ccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccc
Q 039137 344 DW--GRCPQLSLLDVSINNISGS--IP-LEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELG 418 (912)
Q Consensus 344 ~~--~~l~~L~~L~Ls~N~l~~~--~~-~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 418 (912)
.+ +.+++|++|++++|++++. ++ ..+..+++|++|+|++|++++..|. ..+.
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----------------------~~~~ 250 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA-----------------------PSCD 250 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC-----------------------SCCC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch-----------------------hhhh
Confidence 22 5566666666666666521 11 1223344555555555555543321 2233
Q ss_pred cccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCc
Q 039137 419 SLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483 (912)
Q Consensus 419 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 483 (912)
.+++|++|+|++|+|+. +|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|+|++
T Consensus 251 ~l~~L~~L~Ls~N~l~~-ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLKQ-VPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCTTCCEEECTTSCCSS-CCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hcCCCCEEECCCCccCh-hhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 34455555555555542 333333 4555555555555543 33 5555555555555555543
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=281.86 Aligned_cols=249 Identities=26% Similarity=0.281 Sum_probs=149.7
Q ss_pred cceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccC
Q 039137 255 LRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSN 334 (912)
Q Consensus 255 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 334 (912)
.+.++++++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 45 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 121 (440)
T 3zyj_A 45 FSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFD 121 (440)
T ss_dssp SCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCC
Confidence 456777777777 3555544 4666677777777666666666666777777776666666666666666666666666
Q ss_pred CcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCc
Q 039137 335 NSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP 414 (912)
Q Consensus 335 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p 414 (912)
|+++...+..|..+++|+.|++++|++....+..+..+++|++|+|++|+. +....+
T Consensus 122 n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~-----------------------l~~i~~ 178 (440)
T 3zyj_A 122 NRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR-----------------------LSYISE 178 (440)
T ss_dssp SCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTT-----------------------CCEECT
T ss_pred CcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCC-----------------------cceeCc
Confidence 666655555566666666666666666544444555555555555555322 222222
Q ss_pred cccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccc
Q 039137 415 RELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMES 494 (912)
Q Consensus 415 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 494 (912)
..|..+++|++|+|++|+++.+ | .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 256 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQS 256 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTT
T ss_pred chhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCC
Confidence 3444455555555555555442 2 2455556666666666666555566666666666666666666666666666666
Q ss_pred cccccccCccccCCCcccccccccceEEEccCCcccc
Q 039137 495 LEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 495 L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 531 (912)
|+.|+|++|+|++..+..|..+++|+.|++++|+|.|
T Consensus 257 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 257 LVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 6666666666666666666666666666666666665
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=7.8e-29 Score=265.88 Aligned_cols=224 Identities=23% Similarity=0.204 Sum_probs=104.5
Q ss_pred cEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccC
Q 039137 136 EYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNN 215 (912)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n 215 (912)
++++.+++.++ .+|..+ .++|++|+|++|.+++..+..|+.+++|++|++++|.+++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666665 455433 346666666666666444455555555555555555555444555555555555555555
Q ss_pred C-CcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCc
Q 039137 216 S-FFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVP 294 (912)
Q Consensus 216 ~-l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 294 (912)
. +.+..|..+.++++|++|++++|++++..|..+.++++|++ |++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~------------------------L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQY------------------------LYLQDNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCE------------------------EECCSSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCE------------------------EECCCCcccccCH
Confidence 4 43333444444444444444444444333333333344444 4444444433333
Q ss_pred cccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccccccccccccc
Q 039137 295 KSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQ 374 (912)
Q Consensus 295 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 374 (912)
..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+.+..+..+..+++|+.|++++|++++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 33444444444444444444333334444444444444444444444444444444444444444444333333444444
Q ss_pred ccEEEccCcccc
Q 039137 375 LQYLDLSSNYIV 386 (912)
Q Consensus 375 L~~L~L~~N~l~ 386 (912)
|++|+|++|.+.
T Consensus 227 L~~L~l~~N~~~ 238 (285)
T 1ozn_A 227 LQYLRLNDNPWV 238 (285)
T ss_dssp CCEEECCSSCEE
T ss_pred cCEEeccCCCcc
Confidence 444444444443
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.8e-28 Score=281.18 Aligned_cols=228 Identities=22% Similarity=0.250 Sum_probs=119.2
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
+++++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45666666666666666666666666666666666666555566666666666666666666444445555666666666
Q ss_pred cCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCccc
Q 039137 189 DSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGI 268 (912)
Q Consensus 189 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 268 (912)
++|+++...+..|.++++|++|++++|...+.++ +..|..+++|++|+|++|++++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~-----------------------~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYIS-----------------------EGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-----------------------TTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccC-----------------------hhhccCCCCCCEEECCCCccccc
Confidence 6665554334445555555555555432222222 22344455555555555555532
Q ss_pred CCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCC
Q 039137 269 IPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRC 348 (912)
Q Consensus 269 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 348 (912)
| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 2 24444444444444444444444444444444555554444444444444444444444444444444333334444
Q ss_pred CCCCEEeccCCcc
Q 039137 349 PQLSLLDVSINNI 361 (912)
Q Consensus 349 ~~L~~L~Ls~N~l 361 (912)
++|+.|++++|.+
T Consensus 290 ~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 290 RYLVELHLHHNPW 302 (452)
T ss_dssp TTCCEEECCSSCE
T ss_pred cCCCEEEccCCCc
Confidence 4444444444433
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.3e-28 Score=264.20 Aligned_cols=205 Identities=24% Similarity=0.216 Sum_probs=93.3
Q ss_pred ccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEeccccc-ccCCCCcccCCCCCccEEEc
Q 039137 254 NLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNY-LTGNISETFGTYPNLTFIDL 332 (912)
Q Consensus 254 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L 332 (912)
+|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++|. ++...+..|..+++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 44444444444444433444444444444444444444444444444444444444443 44333444444444444444
Q ss_pred cCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCC
Q 039137 333 SNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGC 412 (912)
Q Consensus 333 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 412 (912)
++|.+.+..+..+..+++|++|++++|++++..+..++.+++|++|+|++|++++..+..+..+++|+.|++++|++++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 44444444444444444444444444444433333344444444444444444433333344444444444444444444
Q ss_pred CccccccccccccccccCcccCccccccccccccccEEEecccccc
Q 039137 413 IPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLS 458 (912)
Q Consensus 413 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 458 (912)
.|..+..+++|+.|++++|+++++.+..+..+++|++|+|++|++.
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 4444444444444444444444443344444444444444444443
No 315
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.96 E-value=1.1e-31 Score=319.77 Aligned_cols=447 Identities=16% Similarity=0.104 Sum_probs=304.2
Q ss_pred CCccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccc---cCCc------------cccCCCCCc
Q 039137 72 PCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFG---IIPP------------QISNLSNLE 136 (912)
Q Consensus 72 ~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~---~~p~------------~~~~l~~L~ 136 (912)
|++|.++... . ...+++... .+..+...+..+++|++|+|+++.... ..|. ....+++|+
T Consensus 34 ck~W~~~~~~-~--~~~l~~~~~--~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~ 108 (594)
T 2p1m_B 34 CKSWYEIERW-C--RRKVFIGNC--YAVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLE 108 (594)
T ss_dssp CHHHHHHHHH-H--CCEEEESST--TSSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred HHHHHHhhhh-h--ceEEeeccc--cccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCC
Confidence 5578877221 1 223333221 122223346678999999999976321 1222 234678999
Q ss_pred EEeccccccccccccccc-cccccceeecccc-cccCC-CCccccCcccccEEEccCCcCCCCCCccC----CCCcccee
Q 039137 137 YLDFSANKLFGQIPSGIG-LLTHLTVLHISRN-WLSGS-IPHEVGQLTVLNQLALDSNFLNGSIPRSL----GNLTHVVI 209 (912)
Q Consensus 137 ~L~Ls~n~l~~~~p~~~~-~l~~L~~L~L~~n-~l~~~-~p~~~~~l~~L~~L~l~~n~l~~~~p~~~----~~l~~L~~ 209 (912)
+|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++
T Consensus 109 ~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~ 188 (594)
T 2p1m_B 109 EIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVS 188 (594)
T ss_dssp EEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCE
T ss_pred eEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcE
Confidence 999999999887777776 6899999999999 55532 45555689999999999999876554444 36779999
Q ss_pred eeeccCC--CcC-ccccccccccccceeecccc-cccCccccccccccccceeeeccc-------cCcccCCcccCCccc
Q 039137 210 LYLYNNS--FFG-SIPQEIGNLKSLFDLELCIN-QLSGAIPLSISNLTNLRFLFLYHN-------ELSGIIPQEIGNLKK 278 (912)
Q Consensus 210 L~L~~n~--l~~-~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~l~~L~~L~L~~N-------~l~~~~~~~l~~l~~ 278 (912)
|++++|. +.. .++..+.++++|+.|++++| .+++ +|..+..+++|+.|+++.+ .+.+ ++..+.++++
T Consensus 189 L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~ 266 (594)
T 2p1m_B 189 LNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKE 266 (594)
T ss_dssp EECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTT
T ss_pred EEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCC
Confidence 9999987 221 12223355799999999998 4554 7888889999999995544 4444 3446778888
Q ss_pred cchh-hhccCccCCCCccccccccccceEecccccccCCC-CcccCCCCCccEEEccCCcCccccccc-CCCCCCCCEEe
Q 039137 279 LNSL-LLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNI-SETFGTYPNLTFIDLSNNSFFGEILSD-WGRCPQLSLLD 355 (912)
Q Consensus 279 L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~ 355 (912)
|+.| .+.+... +.++..+..+++|++|+|++|.+++.. ...+..+++|+.|++++| +....... ...+++|+.|+
T Consensus 267 L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~ 344 (594)
T 2p1m_B 267 LRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELR 344 (594)
T ss_dssp CCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEE
T ss_pred cccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEE
Confidence 8887 4443332 245555667889999999999876432 233568899999999988 44332222 23578899998
Q ss_pred cc---------CCccccccccccc-ccccccEEEccCccccCCCCcccc-ccccccEEEcc--C----CcccCCC-----
Q 039137 356 VS---------INNISGSIPLEIG-ESLQLQYLDLSSNYIVGEIPTQLG-NIIYLNRLSLS--G----NKLSGCI----- 413 (912)
Q Consensus 356 Ls---------~N~l~~~~~~~~~-~~~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~--~----N~l~~~~----- 413 (912)
++ .+.+++.....+. .+++|++|+++.|.+++..+..+. .+++|+.|+++ + |.+++..
T Consensus 345 L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~ 424 (594)
T 2p1m_B 345 VFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGF 424 (594)
T ss_dssp EECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHH
T ss_pred EecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHH
Confidence 83 3455543333333 477888888888888765555554 57888999988 4 5555221
Q ss_pred ccccccccccccccccCcccCccccccccc-cccccEEEecccccccccchhh-hcccccceeeccccccCccccc-ccc
Q 039137 414 PRELGSLINLEYLDLSANNLSNFVPESLGS-LVKLYYLNLSHNKLSQQIPIEL-DNLIHLSELDLSHNFLGEKISS-RIC 490 (912)
Q Consensus 414 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~-~~~ 490 (912)
+..+..+++|+.|+|++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|++|+|++|.+++.... ...
T Consensus 425 ~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~ 503 (594)
T 2p1m_B 425 GAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANAS 503 (594)
T ss_dssp HHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGG
T ss_pred HHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHH
Confidence 22256678888898877 666655555554 7888999999888876655555 6688889999999888655443 344
Q ss_pred cccccccccccCccccCCCcccc-cccccceEEEccCCc
Q 039137 491 RMESLEKLNLSYNNLSGLIPRCF-EEMHGLLHIDISYNK 528 (912)
Q Consensus 491 ~l~~L~~L~ls~N~l~~~~p~~~-~~l~~L~~l~ls~N~ 528 (912)
.+++|+.|++++|+++......+ ..++.++...+..+.
T Consensus 504 ~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 504 KLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp GGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSS
T ss_pred hCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCC
Confidence 58888888898888854433334 456777666665543
No 316
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3e-28 Score=278.28 Aligned_cols=227 Identities=24% Similarity=0.235 Sum_probs=112.5
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
++++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 45666666666666666666666666666666666666555566666666666666666666444445556666666666
Q ss_pred cCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCccc
Q 039137 189 DSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGI 268 (912)
Q Consensus 189 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 268 (912)
++|+++...+..|.++++|++|+|++|...+.++ +..|.++++|++|+|++|+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~-----------------------~~~~~~l~~L~~L~L~~n~l~~- 199 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYIS-----------------------EGAFEGLSNLRYLNLAMCNLRE- 199 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEEC-----------------------TTTTTTCSSCCEEECTTSCCSS-
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeC-----------------------cchhhcccccCeecCCCCcCcc-
Confidence 6665554444455555555555555432222222 2234444445555555544442
Q ss_pred CCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCC
Q 039137 269 IPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRC 348 (912)
Q Consensus 269 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 348 (912)
+| .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 12 23333444444444444443333444444444444444444444334444444444444444444433333333333
Q ss_pred CCCCEEeccCCc
Q 039137 349 PQLSLLDVSINN 360 (912)
Q Consensus 349 ~~L~~L~Ls~N~ 360 (912)
++|+.|+|++|.
T Consensus 279 ~~L~~L~L~~Np 290 (440)
T 3zyj_A 279 HHLERIHLHHNP 290 (440)
T ss_dssp TTCCEEECCSSC
T ss_pred cCCCEEEcCCCC
Confidence 333333333333
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-29 Score=276.14 Aligned_cols=237 Identities=25% Similarity=0.249 Sum_probs=125.1
Q ss_pred cccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEE
Q 039137 251 NLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFI 330 (912)
Q Consensus 251 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 330 (912)
.+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ |..+++|++|++++|.+++.. ..++|++|
T Consensus 32 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L 104 (317)
T 3o53_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETL 104 (317)
T ss_dssp TGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEE
T ss_pred cCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEE
Confidence 33444444444444444444444444444444444444443322 444455555555555544322 12455555
Q ss_pred EccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccc-cccccccEEEccCCcc
Q 039137 331 DLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQL-GNIIYLNRLSLSGNKL 409 (912)
Q Consensus 331 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l 409 (912)
++++|++++..+.. +++|+.|++++|++++..+..++.+++|++|+|++|++++..+..+ ..+++|++|+|++|++
T Consensus 105 ~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 181 (317)
T 3o53_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (317)
T ss_dssp ECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcC
Confidence 55555555443332 3455555555555555555555555566666666666655444444 2455666666666665
Q ss_pred cCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccC-cccccc
Q 039137 410 SGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG-EKISSR 488 (912)
Q Consensus 410 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~ 488 (912)
++. +. ...+++|++|+|++|+++++++ .+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++. +.++..
T Consensus 182 ~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 182 YDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp CEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred ccc-cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 533 22 2235566666666666665333 3556666666666666665 34555666666666666666665 445555
Q ss_pred ccccccccccccc
Q 039137 489 ICRMESLEKLNLS 501 (912)
Q Consensus 489 ~~~l~~L~~L~ls 501 (912)
+..+++|+.|+++
T Consensus 258 ~~~~~~L~~l~l~ 270 (317)
T 3o53_A 258 FSKNQRVQTVAKQ 270 (317)
T ss_dssp HHTCHHHHHHHHH
T ss_pred HhccccceEEECC
Confidence 5666666666665
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.3e-29 Score=274.28 Aligned_cols=264 Identities=20% Similarity=0.160 Sum_probs=178.6
Q ss_pred eeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCc
Q 039137 209 ILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNH 288 (912)
Q Consensus 209 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 288 (912)
.++++++.+...++..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~ 91 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNY 91 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSE
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCc
Confidence 33444444433333334444555555555555555555555555555555555555554433 5555556666666665
Q ss_pred cCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccccccc
Q 039137 289 FRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLE 368 (912)
Q Consensus 289 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 368 (912)
+++.. ..++|++|++++|.+++..+.. +++|++|++++|++++..+..++.+++|+.|++++|++.+..+..
T Consensus 92 l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 163 (317)
T 3o53_A 92 VQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAE 163 (317)
T ss_dssp EEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGG
T ss_pred ccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHH
Confidence 55321 2356666666666666544433 456777777777777766667777777777777777777666665
Q ss_pred cc-ccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccc
Q 039137 369 IG-ESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKL 447 (912)
Q Consensus 369 ~~-~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 447 (912)
+. .+++|++|+|++|++++. + ....+++|++|+|++|++++ +|..+..+++|++|+|++|++++ +|..+..+++|
T Consensus 164 ~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L 239 (317)
T 3o53_A 164 LAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNL 239 (317)
T ss_dssp GGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTC
T ss_pred HhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCC
Confidence 53 577888888888888754 2 23347889999999999985 44558889999999999999986 57778899999
Q ss_pred cEEEecccccc-cccchhhhcccccceeecccc-ccCcccc
Q 039137 448 YYLNLSHNKLS-QQIPIELDNLIHLSELDLSHN-FLGEKIS 486 (912)
Q Consensus 448 ~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~ 486 (912)
+.|+|++|+++ +.+|..+..+++|+.|++++| .+++..+
T Consensus 240 ~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 240 EHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 99999999998 788889999999999999844 4555444
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=4.8e-27 Score=276.06 Aligned_cols=269 Identities=24% Similarity=0.300 Sum_probs=152.8
Q ss_pred cccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeec
Q 039137 157 THLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLEL 236 (912)
Q Consensus 157 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 236 (912)
.++++|++++|.++ .+|..+. ++|++|+|++|.++ .+|. .+++|++|+|++|.++ .+|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEEC
Confidence 35899999999998 8888776 78899999999888 5665 4677778888887776 3444 4566666666
Q ss_pred ccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCC
Q 039137 237 CINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGN 316 (912)
Q Consensus 237 ~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 316 (912)
++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|.
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~--------------------- 158 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA--------------------- 158 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---------------------
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---------------------
Confidence 6666653 332 34555666666665553 2322 2344444444444442 121
Q ss_pred CCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCcccccc
Q 039137 317 ISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNI 396 (912)
Q Consensus 317 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l 396 (912)
.+++|+.|++++|.+++. + ..+++|+.|++++|++++ +|.. +++|+.|++++|.++ .+|.. +
T Consensus 159 ------~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l~~~---~ 220 (622)
T 3g06_A 159 ------LPSELCKLWAYNNQLTSL-P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---P 220 (622)
T ss_dssp ------CCTTCCEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SCCCC---C
T ss_pred ------ccCCCCEEECCCCCCCCC-c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-ccCCC---C
Confidence 123444445555444431 1 233445555555555542 2221 245555666666555 23322 2
Q ss_pred ccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeec
Q 039137 397 IYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDL 476 (912)
Q Consensus 397 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 476 (912)
++|+.|++++|++++ +| ..+++|++|+|++|+|+.+ |. .+++|+.|+|++|+|+ .+|..+.++++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~l-p~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSL-PM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcC-Cc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 456666666666653 33 2345566666666666543 32 3456666666666665 45555666666666666
Q ss_pred cccccCccccccccccc
Q 039137 477 SHNFLGEKISSRICRME 493 (912)
Q Consensus 477 s~N~l~~~~~~~~~~l~ 493 (912)
++|++++.+|..+..++
T Consensus 292 ~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 292 EGNPLSERTLQALREIT 308 (622)
T ss_dssp CSCCCCHHHHHHHHHHH
T ss_pred cCCCCCCcCHHHHHhcc
Confidence 66666665555554443
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.9e-28 Score=280.97 Aligned_cols=234 Identities=25% Similarity=0.233 Sum_probs=111.2
Q ss_pred ccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEcc
Q 039137 254 NLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLS 333 (912)
Q Consensus 254 ~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 333 (912)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|+.|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 55555555555555555555555555555555555554333 4555555555555555543221 1344444444
Q ss_pred CCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCC
Q 039137 334 NNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCI 413 (912)
Q Consensus 334 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 413 (912)
+|.+++..+. . +++|++|+|++|.+++..|..++++++|+.|+|++|.+++..
T Consensus 108 ~N~l~~~~~~------------------------~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (487)
T 3oja_A 108 NNNISRVSCS------------------------R---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (487)
T ss_dssp SSCCCCEEEC------------------------C---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEE
T ss_pred CCcCCCCCcc------------------------c---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcC
Confidence 4444433322 1 234444444444444444444444444444444444444444
Q ss_pred ccccc-cccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccc
Q 039137 414 PRELG-SLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRM 492 (912)
Q Consensus 414 p~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 492 (912)
|..+. .+++|++|+|++|.|++..+ +..+++|+.|+|++|+|++. |..+..+++|+.|+|++|.|++ +|..+..+
T Consensus 161 ~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l 236 (487)
T 3oja_A 161 FAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVL-IEKALRFS 236 (487)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCE-ECTTCCCC
T ss_pred hHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcc-cchhhccC
Confidence 44443 34455555555555544321 22345555555555555432 2234455555555555555543 33344455
Q ss_pred cccccccccCcccc-CCCcccccccccceEEEcc
Q 039137 493 ESLEKLNLSYNNLS-GLIPRCFEEMHGLLHIDIS 525 (912)
Q Consensus 493 ~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~l~ls 525 (912)
++|+.|++++|+++ +.+|..+..++.|+.++++
T Consensus 237 ~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 55555555555554 3344444444444444443
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=6.7e-27 Score=248.54 Aligned_cols=216 Identities=24% Similarity=0.295 Sum_probs=124.4
Q ss_pred CCCccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccc
Q 039137 71 SPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIP 150 (912)
Q Consensus 71 ~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 150 (912)
++|.|.|+.|+..+. .+.+++++++++ .+|..+. ++|++|+|++|++++..+
T Consensus 3 ~~C~~~~~~C~c~~~-------------------------~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~ 54 (270)
T 2o6q_A 3 ALCKKDGGVCSCNNN-------------------------KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPS 54 (270)
T ss_dssp CCBGGGTCSBEEETT-------------------------TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCT
T ss_pred ccCCCCCCCCEeCCC-------------------------CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCH
Confidence 789999999964322 245666777776 3565544 567777777777775555
Q ss_pred cccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccc
Q 039137 151 SGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKS 230 (912)
Q Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 230 (912)
..|+.+++|++|+|++|.+++..+..|..+++|++|++++|++++..+..|.++++|++|+|++|.+++..+..|+++++
T Consensus 55 ~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 134 (270)
T 2o6q_A 55 KAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTK 134 (270)
T ss_dssp TSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred HHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcC
Confidence 56777777777777777776444444566666666666666666544445555555555555555555444444444444
Q ss_pred cceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEeccc
Q 039137 231 LFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQ 310 (912)
Q Consensus 231 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 310 (912)
|++|++++|+++ +..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 135 L~~L~Ls~n~l~------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (270)
T 2o6q_A 135 LTYLSLGYNELQ------------------------SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDN 190 (270)
T ss_dssp CCEEECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCC------------------------ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCC
Confidence 444444444444 33333344444444444444444444444445555555555555
Q ss_pred ccccCCCCcccCCCCCccEEEccCCcCc
Q 039137 311 NYLTGNISETFGTYPNLTFIDLSNNSFF 338 (912)
Q Consensus 311 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 338 (912)
|.+++..+..|..+++|+.|+|++|.+.
T Consensus 191 N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 191 NQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5555544555555555666666666554
No 322
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.4e-28 Score=287.35 Aligned_cols=188 Identities=19% Similarity=0.144 Sum_probs=133.2
Q ss_pred eeecCceEEEEEEe-CCCCEEEEEEccCCCCCC------chHHHHHHHHHHHHHhhc-CCCccccEEEEEEcCCeeeEEE
Q 039137 646 IGKGGHGSVYRAKV-PSGEIFAVKKFHSPLPGE------MSFQQEEFLNEIQALTEI-RHRNIVKFYGFCSHPKHSFIIY 717 (912)
Q Consensus 646 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~~~Ei~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 717 (912)
.+.|+.|.+..++. -.|+.||+|.+....... .....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 45566666555432 268999999997643221 122346799999999999 6999999999999999999999
Q ss_pred eecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCCC
Q 039137 718 EYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPD 797 (912)
Q Consensus 718 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 797 (912)
||++|++|.+++.+. ++++.. +|+.||+.||+|+|++ |||||||||+|||++.+|.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 999999999999543 445543 5899999999999999 9999999999999999999999999999987666
Q ss_pred CCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039137 798 SSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843 (912)
Q Consensus 798 ~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 843 (912)
.......+||+.|||||++.+. +..++|+||+|++.+++.++..+
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 5666678899999999998764 67789999999998887665444
No 323
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=6.9e-28 Score=277.82 Aligned_cols=239 Identities=23% Similarity=0.214 Sum_probs=173.0
Q ss_pred cccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccc
Q 039137 225 IGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLV 304 (912)
Q Consensus 225 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 304 (912)
...+++|+.|+|++|.+++..|..|+.+++|++|+|++|.+++.+| +..+++|++|+|++|.+++.. ..++|+
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~ 102 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIE 102 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCC
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcC
Confidence 3345599999999999999888999999999999999999998766 999999999999999998543 238999
Q ss_pred eEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccccccccc-ccccccEEEccCc
Q 039137 305 KLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIG-ESLQLQYLDLSSN 383 (912)
Q Consensus 305 ~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~L~~L~L~~N 383 (912)
.|++++|.+++..+.. +++|+.|+|++|.+++..+..++.+++|+.|++++|.+++..|..+. .+++|++|+|++|
T Consensus 103 ~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 103 TLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred EEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCC
Confidence 9999999999876654 57899999999988877777776677777777777666665555554 4555666666666
Q ss_pred cccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccch
Q 039137 384 YIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPI 463 (912)
Q Consensus 384 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 463 (912)
.|++. |. +..+++|++|+|++|.|++++| .+..+++|+.|+|++|+|++ +|.
T Consensus 180 ~l~~~-------------------------~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 180 FIYDV-------------------------KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp CCCEE-------------------------EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECT
T ss_pred ccccc-------------------------cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cch
Confidence 55533 11 1234555566666666655333 35566666666666666653 455
Q ss_pred hhhcccccceeeccccccC-ccccccccccccccccccc
Q 039137 464 ELDNLIHLSELDLSHNFLG-EKISSRICRMESLEKLNLS 501 (912)
Q Consensus 464 ~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ls 501 (912)
.+..+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 232 ~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 5666666666666666665 4556666667777777665
No 324
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=3.1e-29 Score=298.61 Aligned_cols=396 Identities=16% Similarity=0.146 Sum_probs=295.2
Q ss_pred CCCCCccEEEccCCcccccCCcccc-CCCCCcEEecccc-ccccc-cccccccccccceeecccccccCCCCcccc----
Q 039137 106 SSFPHLVYLDLYNNELFGIIPPQIS-NLSNLEYLDFSAN-KLFGQ-IPSGIGLLTHLTVLHISRNWLSGSIPHEVG---- 178 (912)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n-~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~---- 178 (912)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+..+++|++|+|++|.+++..+..+.
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 4678999999999999887777776 7899999999999 56543 555566899999999999998876554444
Q ss_pred CcccccEEEccCCc--CCCC-CCccCCCCccceeeeeccCCCcCccccccccccccceeecc-------cccccCccccc
Q 039137 179 QLTVLNQLALDSNF--LNGS-IPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELC-------INQLSGAIPLS 248 (912)
Q Consensus 179 ~l~~L~~L~l~~n~--l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~-------~n~l~~~~p~~ 248 (912)
.+++|++|++++|. ++.. ++..+.++++|++|++++|...+.+|..+.++++|++|+++ .|.+.+ ++..
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~ 260 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVA 260 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHH
Confidence 67799999999997 2211 11223456999999999994334488889999999999954 444553 4557
Q ss_pred ccccccccee-eeccccCcccCCcccCCccccchhhhccCccCCCCc-cccccccccceEecccccccCC-CCcccCCCC
Q 039137 249 ISNLTNLRFL-FLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVP-KSFRNLTDLVKLRLNQNYLTGN-ISETFGTYP 325 (912)
Q Consensus 249 ~~~l~~L~~L-~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~ 325 (912)
+.++++|+.| .+.+... +.++..+..+++|++|+|++|.+++... ..+..+++|++|++++| ++.. .+.....++
T Consensus 261 l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~ 338 (594)
T 2p1m_B 261 LSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCK 338 (594)
T ss_dssp HHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCT
T ss_pred HhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCC
Confidence 8899999999 4544333 2455555678999999999999774432 23568899999999998 4422 223334589
Q ss_pred CccEEEccC---------CcCcccccccCC-CCCCCCEEeccCCccccccccccc-ccccccEEEcc--C----ccccCC
Q 039137 326 NLTFIDLSN---------NSFFGEILSDWG-RCPQLSLLDVSINNISGSIPLEIG-ESLQLQYLDLS--S----NYIVGE 388 (912)
Q Consensus 326 ~L~~L~Ls~---------N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~-~~~~L~~L~L~--~----N~l~~~ 388 (912)
+|++|++++ +.+++.....+. .+++|+.|+++.|++++.....+. .+++|++|+|+ + |.+++.
T Consensus 339 ~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~ 418 (594)
T 2p1m_B 339 DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE 418 (594)
T ss_dssp TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC
T ss_pred CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC
Confidence 999999943 566554444443 489999999999999876666665 58899999999 4 566522
Q ss_pred -----CCccccccccccEEEccCCcccCCCcccccc-ccccccccccCcccCccccccc-cccccccEEEeccccccccc
Q 039137 389 -----IPTQLGNIIYLNRLSLSGNKLSGCIPRELGS-LINLEYLDLSANNLSNFVPESL-GSLVKLYYLNLSHNKLSQQI 461 (912)
Q Consensus 389 -----~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~ 461 (912)
++..+.++++|+.|++++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|++++..
T Consensus 419 ~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~ 497 (594)
T 2p1m_B 419 PLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKA 497 (594)
T ss_dssp CTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHH
T ss_pred chhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHH
Confidence 222366788999999987 777666666665 8899999999999987655555 67899999999999997554
Q ss_pred ch-hhhcccccceeeccccccCccccccc-ccccccccccccCccc
Q 039137 462 PI-ELDNLIHLSELDLSHNFLGEKISSRI-CRMESLEKLNLSYNNL 505 (912)
Q Consensus 462 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~ls~N~l 505 (912)
.. ....+++|++|++++|+++......+ ..+++|+...+..+.-
T Consensus 498 ~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~ 543 (594)
T 2p1m_B 498 LLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDERGA 543 (594)
T ss_dssp HHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSSSC
T ss_pred HHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCCCc
Confidence 44 44568999999999999965444444 4567777666665543
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.2e-25 Score=239.91 Aligned_cols=210 Identities=24% Similarity=0.234 Sum_probs=148.2
Q ss_pred CccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEcc
Q 039137 326 NLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLS 405 (912)
Q Consensus 326 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 405 (912)
+|++|+|++|.+++..+..+..+++|++|++++|++.+..+..+..+++|++|+|++|++++..+..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555555555555555666666666666655555556666666666666666665555666666667777777
Q ss_pred CCcccCCCccccccccccccccccCcccCcc-ccccccccccccEEEecccccccccchhhhcccccc----eeeccccc
Q 039137 406 GNKLSGCIPRELGSLINLEYLDLSANNLSNF-VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLS----ELDLSHNF 480 (912)
Q Consensus 406 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N~ 480 (912)
+|++++..+..+..+++|++|++++|++++. +|..|..+++|++|+|++|++++..+..+..+++|+ +|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 7776665555677777777777777777664 367777777888888888888776667777777776 78888888
Q ss_pred cCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCCCC
Q 039137 481 LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIPNS 536 (912)
Q Consensus 481 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~~~ 536 (912)
+++..+..+.. .+|+.|++++|++++..+..|..+++|+.|++++|++.|..|..
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 87766655544 47899999999999887788888999999999999999876543
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=6.2e-26 Score=242.03 Aligned_cols=205 Identities=24% Similarity=0.231 Sum_probs=105.9
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEcc
Q 039137 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALD 189 (912)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 189 (912)
+|++|+|++|++++..+..|.++++|++|+|++|++++..+..|+.+++|++|+|++|.+++..|..++.+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 46666666666665555566666666666666666655444556666666666666666655545555555555555555
Q ss_pred CCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccC
Q 039137 190 SNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGII 269 (912)
Q Consensus 190 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 269 (912)
+|.+.+..+..++++++|++|++++|.+++. .+|..++++++|++|+|++|++++..
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----------------------~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSF-----------------------KLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-----------------------CCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred CCCccccCchhcccCCCCCEEECcCCcccee-----------------------cCchhhccCCCCCEEECCCCCCCcCC
Confidence 5555544444455555555555555554431 12444444444455555555444444
Q ss_pred CcccCCccccc----hhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCc
Q 039137 270 PQEIGNLKKLN----SLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFF 338 (912)
Q Consensus 270 ~~~l~~l~~L~----~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 338 (912)
+..+..+++|+ +|++++|.+++..+..+.. .+|+.|+|++|.+++.++..|..+++|+.|+|++|++.
T Consensus 166 ~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp GGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred HHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 44444333333 3444444444333332222 24555555555555444444445555555555555443
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=3.6e-25 Score=235.37 Aligned_cols=229 Identities=20% Similarity=0.180 Sum_probs=176.4
Q ss_pred ccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEe
Q 039137 276 LKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355 (912)
Q Consensus 276 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 355 (912)
+.++..+++..+.+... ..+..+++|+.|++++|.++.. ..+..+++|++|+|++|.+.+. ..+..+++|++|+
T Consensus 18 ~~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 91 (272)
T 3rfs_A 18 FAETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLI 91 (272)
T ss_dssp HHHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEE
T ss_pred HHHHHHHHhcCcccccc--cccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEE
Confidence 45666777777776644 3456678888888888887742 3467788888888888888653 4677788888888
Q ss_pred ccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCc
Q 039137 356 VSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435 (912)
Q Consensus 356 Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 435 (912)
+++|++++..+..++.+++|++|+|++|++++..+..+.++++|++|++++|++++..+..+..+++|++|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 88888887777777788888888888888887766677888888888888888887777777888888888888888888
Q ss_pred cccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccc
Q 039137 436 FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEE 515 (912)
Q Consensus 436 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 515 (912)
..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|.+.+ .+++|+.|+++.|+++|.+|..+..
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred cCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccc
Confidence 777777888888888888888887777778888888888888887754 3557888888888888888876655
Q ss_pred cc
Q 039137 516 MH 517 (912)
Q Consensus 516 l~ 517 (912)
+.
T Consensus 245 ~~ 246 (272)
T 3rfs_A 245 VA 246 (272)
T ss_dssp BC
T ss_pred cC
Confidence 43
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=1.5e-25 Score=238.30 Aligned_cols=186 Identities=31% Similarity=0.366 Sum_probs=87.1
Q ss_pred ccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccc
Q 039137 177 VGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLR 256 (912)
Q Consensus 177 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 256 (912)
++.+++|++|++++|.+++ + +.+.++++|++|+|++|.+++..+..++++++|++|++++|++++..+..|+.+++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 3334444444444444332 1 2334444444444444444433333344444444444444444444444444455555
Q ss_pred eeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCc
Q 039137 257 FLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNS 336 (912)
Q Consensus 257 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 336 (912)
+|+|++|++++..+..+..+++|++|++++|++++..+..|..+++|++|++++|.+++.++..|..+++|+.|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 55555555554444444445555555555555554444444555555555555555555444445555555555555554
Q ss_pred CcccccccCCCCCCCCEEeccCCcccccccccccc
Q 039137 337 FFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGE 371 (912)
Q Consensus 337 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (912)
+.+ .+++|+.|+++.|.++|.+|..++.
T Consensus 217 ~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 217 WDC-------TCPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp BCC-------CTTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred ccc-------cCcHHHHHHHHHHhCCCcccCcccc
Confidence 432 2334444445555555444444443
No 329
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.5e-24 Score=228.60 Aligned_cols=203 Identities=26% Similarity=0.278 Sum_probs=155.6
Q ss_pred cceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeeccc
Q 039137 159 LTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCI 238 (912)
Q Consensus 159 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 238 (912)
.+.++++++.++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 334444444444 3343332 3445555555555544444555566666666666666544444556677777777777
Q ss_pred ccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCC
Q 039137 239 NQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNIS 318 (912)
Q Consensus 239 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 318 (912)
|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|.+++..+
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 77776666677888899999999999998888889999999999999999998877789999999999999999999888
Q ss_pred cccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccc
Q 039137 319 ETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGS 364 (912)
Q Consensus 319 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 364 (912)
..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+...
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 175 GAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred hHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 8999999999999999999988888899999999999999998754
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.8e-24 Score=230.27 Aligned_cols=203 Identities=25% Similarity=0.268 Sum_probs=123.5
Q ss_pred cCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCccccc
Q 039137 105 FSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLN 184 (912)
Q Consensus 105 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 184 (912)
++++++++.+++++|+++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|.+++ +|.. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcCC
Confidence 456777888888888887 4565554 578888888888877777778888888888888888774 3332 5667777
Q ss_pred EEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeecccc
Q 039137 185 QLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNE 264 (912)
Q Consensus 185 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 264 (912)
+|++++|+++ .+|..+.++++|++|+|++|++++..|..|.++++|++|++++|++++..+..|..+++|+.|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 7777777766 556666666666666666666655444455555555555555555554444444444445555554444
Q ss_pred CcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCc
Q 039137 265 LSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFF 338 (912)
Q Consensus 265 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 338 (912)
++ +..+..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+.
T Consensus 160 l~------------------------~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LT------------------------ELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CS------------------------CCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CC------------------------ccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 44 433344444555555555555555 23333444455666666666554
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.8e-24 Score=228.50 Aligned_cols=205 Identities=25% Similarity=0.239 Sum_probs=128.3
Q ss_pred cccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccccccccccccccc
Q 039137 297 FRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQ 376 (912)
Q Consensus 297 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~ 376 (912)
+.++++|+.+++++|.++..++... ++++.|+|++|.+++..+..|..+++|+.|++++|+|++..+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---------- 72 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV---------- 72 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC----------
T ss_pred ccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC----------
Confidence 4555666666666666664332221 355555555555555555555555555555555555543221
Q ss_pred EEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccc
Q 039137 377 YLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNK 456 (912)
Q Consensus 377 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 456 (912)
.+.+++|++|++++|+++ .+|..+..+++|++|+|++|+|+++.+..|..+++|++|+|++|+
T Consensus 73 ----------------~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 73 ----------------DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp ----------------CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred ----------------CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 144555555556655555 455556666666666666666666666667777777777777777
Q ss_pred cccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccC
Q 039137 457 LSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQ 532 (912)
Q Consensus 457 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~ 532 (912)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+. +|..+..+..|+.+++++|+|.|.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCc
Confidence 766666666677777777777777776666666777777777777777774 355566667888888888888764
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=235.05 Aligned_cols=199 Identities=18% Similarity=0.135 Sum_probs=93.5
Q ss_pred ccceeecccccccCCCCccc--cCcccccEEEccCCcCCCCCC----ccCCCCccceeeeeccCCCcCcccccccccccc
Q 039137 158 HLTVLHISRNWLSGSIPHEV--GQLTVLNQLALDSNFLNGSIP----RSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSL 231 (912)
Q Consensus 158 ~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~l~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L 231 (912)
+|++|+|++|.+++..|..+ +.+++|++|+|++|.+++..| ..+..+++|++|+|++|.+.+..|..++++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 34444444444444444444 444444444444444443332 223344444444444444444444444444455
Q ss_pred ceeecccccccCc--c--ccccccccccceeeeccccCcccCCc----ccCCccccchhhhccCccCCCCccccccc---
Q 039137 232 FDLELCINQLSGA--I--PLSISNLTNLRFLFLYHNELSGIIPQ----EIGNLKKLNSLLLAKNHFRGTVPKSFRNL--- 300 (912)
Q Consensus 232 ~~L~l~~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~~~~~~~l--- 300 (912)
++|++++|++.+. + +..++.+++|++|+|++|+++.. +. .+.++++|++|+|++|++++..|..+..+
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETP-TGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCH-HHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCch-HHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 5555555444321 1 11123445555555555555421 11 12344555555555555554444444443
Q ss_pred cccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccc
Q 039137 301 TDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNIS 362 (912)
Q Consensus 301 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 362 (912)
++|++|+|++|+++. +|..+. ++|++|+|++|++++. | .+..+++|+.|++++|+++
T Consensus 251 ~~L~~L~Ls~N~l~~-lp~~~~--~~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 251 SALNSLNLSFAGLEQ-VPKGLP--AKLRVLDLSSNRLNRA-P-QPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TTCCCEECCSSCCCS-CCSCCC--SCCSCEECCSCCCCSC-C-CTTSCCCCSCEECSSTTTS
T ss_pred CcCCEEECCCCCCCc-hhhhhc--CCCCEEECCCCcCCCC-c-hhhhCCCccEEECcCCCCC
Confidence 355555555555552 233332 4566666666666543 1 1455566666666666654
No 333
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=2.7e-24 Score=225.75 Aligned_cols=191 Identities=27% Similarity=0.271 Sum_probs=111.5
Q ss_pred CCCccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccc
Q 039137 71 SPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIP 150 (912)
Q Consensus 71 ~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p 150 (912)
+||.|.|.+|.... +++++++++++ .+|..+. ++|++|+|++|++++..|
T Consensus 3 ~Cp~~~gC~C~~~~---------------------------~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~ 52 (251)
T 3m19_A 3 TCETVTGCTCNEGK---------------------------KEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSD 52 (251)
T ss_dssp -CHHHHSSEEEGGG---------------------------TEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCCCC---------------------------eEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCH
Confidence 68999999995322 23455555555 3444443 356666666666665555
Q ss_pred cccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccc
Q 039137 151 SGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKS 230 (912)
Q Consensus 151 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 230 (912)
..|+.+++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..+.++++
T Consensus 53 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 132 (251)
T 3m19_A 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTK 132 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTT
T ss_pred hHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCc
Confidence 55666666666666666666555555666666666666666666555555556666666666666665444444555555
Q ss_pred cceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCC
Q 039137 231 LFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRG 291 (912)
Q Consensus 231 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 291 (912)
|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|..+++|++|+|++|.+.+
T Consensus 133 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 133 LKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred ccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 5555555555554444455555555555555555555555555555555555555555553
No 334
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=6.5e-25 Score=255.00 Aligned_cols=187 Identities=18% Similarity=0.227 Sum_probs=147.1
Q ss_pred CCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCch----HHHHHHHHHHHHHhhcCCCccccEEEEEEcCCeeeEE
Q 039137 641 NAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMS----FQQEEFLNEIQALTEIRHRNIVKFYGFCSHPKHSFII 716 (912)
Q Consensus 641 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~~~~~~lv 716 (912)
...+.||+|+||+||+|+. .++.+++|+.......... ...+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999955 6788999987543322211 1245689999999999999999766666677888999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCC
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999843 568999999999999999 9999999999999999 999999999997754
Q ss_pred CCCC-------cccccccccccccccccc--CCCCcchhHHHHHHHHHHHHhCCCCc
Q 039137 797 DSSN-------WSELAGTHGYVAPELAYT--LKVTEKCDVYSFGVLALEVIKGKHPR 844 (912)
Q Consensus 797 ~~~~-------~~~~~g~~~y~aPE~~~~--~~~~~~sDvwslG~vl~elltg~~pf 844 (912)
.... .....||+.|||||++.+ ..|+...|+|+..+-..+.+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 135679999999999987 56788899999999888888777765
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.7e-25 Score=248.52 Aligned_cols=260 Identities=18% Similarity=0.143 Sum_probs=146.6
Q ss_pred eeeccCCCcCccccccccccccceeecccccccCccc----ccccccc-ccceeeeccccCcccCCcccCCc-----ccc
Q 039137 210 LYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIP----LSISNLT-NLRFLFLYHNELSGIIPQEIGNL-----KKL 279 (912)
Q Consensus 210 L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~l-----~~L 279 (912)
+.++.|.++|.+|..+...++|++|++++|++++..+ ..+..++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666666666666555566666666666665544 4555555 56666666666665544444443 555
Q ss_pred chhhhccCccCCCCccccccccccceEecccccccCCCCcccCCC-CCccEEEccCCcCcccccccC----CC-CCCCCE
Q 039137 280 NSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTY-PNLTFIDLSNNSFFGEILSDW----GR-CPQLSL 353 (912)
Q Consensus 280 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~----~~-l~~L~~ 353 (912)
++|+|++|++++..+..+... +..+ ++|++|+|++|++++..+..+ .. .++|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeE
Confidence 555555555554444433222 1122 344444444444443333222 22 235555
Q ss_pred EeccCCccccc----ccccccccc-cccEEEccCccccCCCCccccc----c-ccccEEEccCCcccCC----Ccccccc
Q 039137 354 LDVSINNISGS----IPLEIGESL-QLQYLDLSSNYIVGEIPTQLGN----I-IYLNRLSLSGNKLSGC----IPRELGS 419 (912)
Q Consensus 354 L~Ls~N~l~~~----~~~~~~~~~-~L~~L~L~~N~l~~~~~~~l~~----l-~~L~~L~L~~N~l~~~----~p~~~~~ 419 (912)
|++++|++++. ++..+...+ +|++|+|++|++++..+..+.. . ++|++|+|++|++++. ++..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 55555555532 222233333 6666667666666555443332 3 4677777777777642 3444444
Q ss_pred -ccccccccccCcccCcccc----ccccccccccEEEecccccccc-------cchhhhcccccceeeccccccCccccc
Q 039137 420 -LINLEYLDLSANNLSNFVP----ESLGSLVKLYYLNLSHNKLSQQ-------IPIELDNLIHLSELDLSHNFLGEKISS 487 (912)
Q Consensus 420 -l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~-------~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 487 (912)
.++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.+. ++..+..+++|++||+++|++.+..+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCH
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchH
Confidence 3477888888887776544 3345667888888888885433 233566777888888888888765444
Q ss_pred cc
Q 039137 488 RI 489 (912)
Q Consensus 488 ~~ 489 (912)
.+
T Consensus 303 ~~ 304 (362)
T 3goz_A 303 PI 304 (362)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=2.6e-26 Score=252.60 Aligned_cols=270 Identities=14% Similarity=0.127 Sum_probs=135.5
Q ss_pred CCCccceeEecCCCCeEEEeeccccccccccccccCCC--CCccEEEccCCcccccCCccccCCCCCcEEeccccccccc
Q 039137 71 SPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSF--PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQ 148 (912)
Q Consensus 71 ~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 148 (912)
-|.+|.++.|+. ..+..+++....+.+ ..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~-~~~~~l~l~~~~~~~----~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE-SLWQTLDLTGKNLHP----DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS-TTSSEEECTTCBCCH----HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc-hhheeeccccccCCH----HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 466899998863 334555555444331 223333 5566666666666654433 44566666666666666544
Q ss_pred -cccccccccccceeecccccccCCCCccccCcccccEEEccCC-cCCCC-CCccCCCCccceeeeeccC-CCcCc-ccc
Q 039137 149 -IPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSN-FLNGS-IPRSLGNLTHVVILYLYNN-SFFGS-IPQ 223 (912)
Q Consensus 149 -~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n-~l~~~-~p~~~~~l~~L~~L~L~~n-~l~~~-~p~ 223 (912)
+|..+..+++|++|+|++|.+++..|..++.+++|++|++++| .+++. ++..+.++++|++|++++| .+++. ++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~ 188 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQV 188 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHH
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHH
Confidence 5555566666666666666655555555555555555555555 34431 3444444555555555555 44432 344
Q ss_pred cccccc-ccceeecccccccCccccccccccccceeeeccccCc-ccCCcccCCccccchhhhccCc-cCCCCccccccc
Q 039137 224 EIGNLK-SLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS-GIIPQEIGNLKKLNSLLLAKNH-FRGTVPKSFRNL 300 (912)
Q Consensus 224 ~~~~l~-~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l 300 (912)
.+..++ +|++|++++|.+ .++ +.++..+.++++|++|++++|. +++..+..+..+
T Consensus 189 ~~~~l~~~L~~L~l~~~~~----------------------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l 246 (336)
T 2ast_B 189 AVAHVSETITQLNLSGYRK----------------------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQL 246 (336)
T ss_dssp HHHHSCTTCCEEECCSCGG----------------------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGC
T ss_pred HHHhcccCCCEEEeCCCcc----------------------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCC
Confidence 444444 455555544421 222 2233334444455555555554 443444445555
Q ss_pred cccceEeccccc-ccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccc
Q 039137 301 TDLVKLRLNQNY-LTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGE 371 (912)
Q Consensus 301 ~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 371 (912)
++|++|++++|. ++......++.+++|+.|++++| +.......+. ..+..|+++.|++++..|..++.
T Consensus 247 ~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~~~~~l~--~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 247 NYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDGTLQLLK--EALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTTCHHHHH--HHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHHHHHHHH--hhCcceEEecccCccccCCcccc
Confidence 555555555553 22111123455556666666655 3222111111 12444446666666666655543
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=2e-25 Score=247.88 Aligned_cols=255 Identities=20% Similarity=0.221 Sum_probs=132.4
Q ss_pred eeeccccCcccCCcccCCccccchhhhccCccCCCCc----ccccccc-ccceEecccccccCCCCcccCCC-----CCc
Q 039137 258 LFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVP----KSFRNLT-DLVKLRLNQNYLTGNISETFGTY-----PNL 327 (912)
Q Consensus 258 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l-----~~L 327 (912)
++++.|.+++.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555666665555555554556666666666554444 4444454 55555555555554444444332 455
Q ss_pred cEEEccCCcCcccccccCCCCCCCCEEeccCCccccccccccccc-ccccEEEccCccccCCCCccccc-----cccccE
Q 039137 328 TFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGES-LQLQYLDLSSNYIVGEIPTQLGN-----IIYLNR 401 (912)
Q Consensus 328 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~-~~L~~L~L~~N~l~~~~~~~l~~-----l~~L~~ 401 (912)
++|+|++|.+++..+..+... +..+ ++|++|+|++|++++..+..+.. .++|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHH--------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeE
Confidence 555555555443333321111 1111 45555555555555443333222 135555
Q ss_pred EEccCCcccCCCcc----cccccc-ccccccccCcccCccccccccc----c-ccccEEEecccccccc----cchhhhc
Q 039137 402 LSLSGNKLSGCIPR----ELGSLI-NLEYLDLSANNLSNFVPESLGS----L-VKLYYLNLSHNKLSQQ----IPIELDN 467 (912)
Q Consensus 402 L~L~~N~l~~~~p~----~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~~~~~~~ 467 (912)
|+|++|++++..+. .+..++ +|++|+|++|++++..+..+.. + ++|++|+|++|+|++. ++..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 55555555533222 223333 5666666666665554433332 2 4666666666666542 3444444
Q ss_pred c-cccceeeccccccCcccc----cccccccccccccccCccccCCCc-------ccccccccceEEEccCCccccC
Q 039137 468 L-IHLSELDLSHNFLGEKIS----SRICRMESLEKLNLSYNNLSGLIP-------RCFEEMHGLLHIDISYNKLEGQ 532 (912)
Q Consensus 468 l-~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~ls~N~l~~~~p-------~~~~~l~~L~~l~ls~N~l~~~ 532 (912)
+ ++|++|+|++|.|++..+ ..+..+++|+.|+|++|+++++.+ ..+..++.|+.||+++|++.+.
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2 366666666666665433 233455667777777776554433 2455667777888888877654
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=2.9e-25 Score=249.05 Aligned_cols=241 Identities=20% Similarity=0.279 Sum_probs=169.7
Q ss_pred CccccccccccceEecccccccCCCC----cccCCCCCccEEEccCC---cCcccccccC-------CCCCCCCEEeccC
Q 039137 293 VPKSFRNLTDLVKLRLNQNYLTGNIS----ETFGTYPNLTFIDLSNN---SFFGEILSDW-------GRCPQLSLLDVSI 358 (912)
Q Consensus 293 ~~~~~~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~Ls~N---~l~~~~~~~~-------~~l~~L~~L~Ls~ 358 (912)
++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 34445555566666666666554322 33556666666666664 3333334333 5667777777777
Q ss_pred Ccccc----cccccccccccccEEEccCccccCCCCcccc----cc---------ccccEEEccCCccc-CCCc---ccc
Q 039137 359 NNISG----SIPLEIGESLQLQYLDLSSNYIVGEIPTQLG----NI---------IYLNRLSLSGNKLS-GCIP---REL 417 (912)
Q Consensus 359 N~l~~----~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~----~l---------~~L~~L~L~~N~l~-~~~p---~~~ 417 (912)
|++.+ .+|..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +.+| ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 77765 3566667777777777777777643333333 33 78888888888887 3344 466
Q ss_pred ccccccccccccCcccCc-----cccccccccccccEEEecccccc----cccchhhhcccccceeeccccccCcc----
Q 039137 418 GSLINLEYLDLSANNLSN-----FVPESLGSLVKLYYLNLSHNKLS----QQIPIELDNLIHLSELDLSHNFLGEK---- 484 (912)
Q Consensus 418 ~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~~~~~~~l~~L~~L~Ls~N~l~~~---- 484 (912)
..+++|++|+|++|+++. ..+..+..+++|++|+|++|.++ +.+|..+..+++|++|+|++|.|++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 678888899999988873 34457788889999999999986 56788888889999999999998876
Q ss_pred cccccc--cccccccccccCccccC----CCcccc-cccccceEEEccCCccccCC
Q 039137 485 ISSRIC--RMESLEKLNLSYNNLSG----LIPRCF-EEMHGLLHIDISYNKLEGQI 533 (912)
Q Consensus 485 ~~~~~~--~l~~L~~L~ls~N~l~~----~~p~~~-~~l~~L~~l~ls~N~l~~~~ 533 (912)
++..+. .+++|+.|+|++|++++ .+|..+ .++++|+.|++++|++++..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 455663 38899999999999988 466666 66899999999999987643
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.5e-23 Score=216.71 Aligned_cols=178 Identities=21% Similarity=0.171 Sum_probs=112.9
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEeccccc-cccccccccccccccceeeccc-ccccCCCCccccCcccccEEE
Q 039137 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANK-LFGQIPSGIGLLTHLTVLHISR-NWLSGSIPHEVGQLTVLNQLA 187 (912)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~ 187 (912)
+|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|+.+++|++|+|++ |.+++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 68888888888887777788888888888888886 7655555788888888888887 888755556777777777777
Q ss_pred ccCCcCCCCCCccCCCCccce---eeeeccC-CCcCccccccccccccc-eeecccccccCccccccccccccceeeecc
Q 039137 188 LDSNFLNGSIPRSLGNLTHVV---ILYLYNN-SFFGSIPQEIGNLKSLF-DLELCINQLSGAIPLSISNLTNLRFLFLYH 262 (912)
Q Consensus 188 l~~n~l~~~~p~~~~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 262 (912)
+++|++++ +|. +.++++|+ +|++++| .+++..+..|.++++|+ .|++++|+++ .+|......++|+.|+|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 77777774 554 66666665 6666666 66544444455555555 5555555555 2322222224455555555
Q ss_pred cc-CcccCCcccCCc-cccchhhhccCccC
Q 039137 263 NE-LSGIIPQEIGNL-KKLNSLLLAKNHFR 290 (912)
Q Consensus 263 N~-l~~~~~~~l~~l-~~L~~L~L~~N~l~ 290 (912)
|+ ++++.+..|.++ ++|+.|++++|+++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 52 444334444444 44444444444444
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.5e-25 Score=251.53 Aligned_cols=273 Identities=18% Similarity=0.223 Sum_probs=130.2
Q ss_pred cEEeccccccccccccccccccccceeecccccccCCC----CccccCcccccEEEccCCc---CCCCCCccCCCCccce
Q 039137 136 EYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSI----PHEVGQLTVLNQLALDSNF---LNGSIPRSLGNLTHVV 208 (912)
Q Consensus 136 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~----p~~~~~l~~L~~L~l~~n~---l~~~~p~~~~~l~~L~ 208 (912)
+...++...+. .++..+..+++|++|+|++|.+++.. +..+..+++|++|+|++|. +++.+|..+.
T Consensus 12 ~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~------ 84 (386)
T 2ca6_A 12 KLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALR------ 84 (386)
T ss_dssp EESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH------
T ss_pred ccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHH------
Confidence 33344444443 46666777777777777777776542 2335566666666666643 2333333321
Q ss_pred eeeeccCCCcCccccccccccccceeecccccccC----ccccccccccccceeeeccccCcccCCcccCCccccchhhh
Q 039137 209 ILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSG----AIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLL 284 (912)
Q Consensus 209 ~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 284 (912)
.+...+..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+... |..+
T Consensus 85 -----------~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--l~~l-- 149 (386)
T 2ca6_A 85 -----------LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--LQEL-- 149 (386)
T ss_dssp -----------HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--HHHH--
T ss_pred -----------HHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--HHHH--
Confidence 000112445555555555555554 344555555666666666665543322222211 0000
Q ss_pred ccCccCCCCccccccccccceEeccccccc-CCCC---cccCCCCCccEEEccCCcCcc-----cccccCCCCCCCCEEe
Q 039137 285 AKNHFRGTVPKSFRNLTDLVKLRLNQNYLT-GNIS---ETFGTYPNLTFIDLSNNSFFG-----EILSDWGRCPQLSLLD 355 (912)
Q Consensus 285 ~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~~~~~~~l~~L~~L~ 355 (912)
..|.+.+. .++|++|+|++|+++ +..+ ..+..+++|+.|+|++|++.. ..+..+..+++|+.|+
T Consensus 150 ~~~~~~~~-------~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~ 222 (386)
T 2ca6_A 150 AVNKKAKN-------APPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLD 222 (386)
T ss_dssp HHHHHHHT-------CCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEE
T ss_pred hhhhhccc-------CCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEE
Confidence 00001000 034444444444443 1111 233344444445555544431 1222444455555555
Q ss_pred ccCCccc----ccccccccccccccEEEccCccccCC----CCcccc--ccccccEEEccCCcccC----CCcccc-ccc
Q 039137 356 VSINNIS----GSIPLEIGESLQLQYLDLSSNYIVGE----IPTQLG--NIIYLNRLSLSGNKLSG----CIPREL-GSL 420 (912)
Q Consensus 356 Ls~N~l~----~~~~~~~~~~~~L~~L~L~~N~l~~~----~~~~l~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l 420 (912)
|++|.++ +.+|..+..+++|++|+|++|++++. ++..+. .+++|+.|+|++|++++ .+|..+ .++
T Consensus 223 Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l 302 (386)
T 2ca6_A 223 LQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKM 302 (386)
T ss_dssp CCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHC
T ss_pred CcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcC
Confidence 5555553 34444555555555555555555543 333442 25566666666666654 255544 445
Q ss_pred cccccccccCcccCccc
Q 039137 421 INLEYLDLSANNLSNFV 437 (912)
Q Consensus 421 ~~L~~L~Ls~N~l~~~~ 437 (912)
++|++|+|++|.+++..
T Consensus 303 ~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 303 PDLLFLELNGNRFSEED 319 (386)
T ss_dssp TTCCEEECTTSBSCTTS
T ss_pred CCceEEEccCCcCCcch
Confidence 66666666666666543
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=4.7e-25 Score=242.49 Aligned_cols=252 Identities=18% Similarity=0.232 Sum_probs=137.0
Q ss_pred CcEEeccccccccccccccccc--cccceeecccccccCCCCccccCcccccEEEccCCcCCCC-CCccCCCCccceeee
Q 039137 135 LEYLDFSANKLFGQIPSGIGLL--THLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGS-IPRSLGNLTHVVILY 211 (912)
Q Consensus 135 L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~ 211 (912)
++.||+++|.+. |..+..+ ++++.|++++|.+.+..|. +..+++|++|++++|.+++. +|..+.++++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 455566555554 3344444 5666666666666544333 44556666666666665543 555556666666666
Q ss_pred eccCCCcCccccccccccccceeecccc-cccC-ccccccccccccceeeeccc-cCccc-CCcccCCcc-ccchhhhcc
Q 039137 212 LYNNSFFGSIPQEIGNLKSLFDLELCIN-QLSG-AIPLSISNLTNLRFLFLYHN-ELSGI-IPQEIGNLK-KLNSLLLAK 286 (912)
Q Consensus 212 L~~n~l~~~~p~~~~~l~~L~~L~l~~n-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~l~~l~-~L~~L~L~~ 286 (912)
|++|.+++..|..++++++|++|++++| .+++ .++..+.++++|++|++++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 6666666556666666666666666666 4554 25555666777777777777 66643 344455555 666666666
Q ss_pred C--ccC-CCCccccccccccceEeccccc-ccCCCCcccCCCCCccEEEccCCc-CcccccccCCCCCCCCEEeccCCcc
Q 039137 287 N--HFR-GTVPKSFRNLTDLVKLRLNQNY-LTGNISETFGTYPNLTFIDLSNNS-FFGEILSDWGRCPQLSLLDVSINNI 361 (912)
Q Consensus 287 N--~l~-~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l 361 (912)
| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +......
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~------------------ 266 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLL------------------ 266 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGG------------------
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHH------------------
Confidence 6 333 2334444555555555555555 444444444555555555555552 2222122
Q ss_pred cccccccccccccccEEEccCccccCCCCcccccc-ccccEEEccCCcccCCCccccc
Q 039137 362 SGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNI-IYLNRLSLSGNKLSGCIPRELG 418 (912)
Q Consensus 362 ~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l-~~L~~L~L~~N~l~~~~p~~~~ 418 (912)
.++.+++|++|++++| ++. ..+..+ ..+..|++++|++++..|..++
T Consensus 267 ------~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 267 ------ELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp ------GGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred ------HHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCccc
Confidence 3444555555555555 321 122222 2355555666666666665544
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.8e-23 Score=216.24 Aligned_cols=198 Identities=15% Similarity=0.166 Sum_probs=89.5
Q ss_pred ccceEecccccccCCCCcccCCCCCccEEEccCCc-CcccccccCCCCCCCCEEeccC-CcccccccccccccccccEEE
Q 039137 302 DLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNS-FFGEILSDWGRCPQLSLLDVSI-NNISGSIPLEIGESLQLQYLD 379 (912)
Q Consensus 302 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~L~~L~ 379 (912)
+|++|++++|++++..+..|..+++|++|++++|+ ++...+..|..+++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 44555555555554444445555555555555553 4433333444444444444444 444433333444444444444
Q ss_pred ccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCc-ccCcccccccccccccc-EEEeccccc
Q 039137 380 LSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSAN-NLSNFVPESLGSLVKLY-YLNLSHNKL 457 (912)
Q Consensus 380 L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l 457 (912)
+++|++++ +|. +..+++|+ .|++|++++| +++++.+..|..+++|+ +|++++|++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 44444442 232 33333333 0014444444 44444444444444555 555555554
Q ss_pred ccccchhhhcccccceeeccccc-cCcccccccccc-cccccccccCccccCCCcccccccccceEEEccC
Q 039137 458 SQQIPIELDNLIHLSELDLSHNF-LGEKISSRICRM-ESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISY 526 (912)
Q Consensus 458 ~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~ 526 (912)
+...+..|.. ++|++|+|++|+ +++..+..|..+ ++|+.|++++|+|++..+. .+++|+.|++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~ 235 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARN 235 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTT
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccC
Confidence 4222222222 455555555552 544444445555 5555555555555544332 334445555544
No 343
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=227.17 Aligned_cols=226 Identities=17% Similarity=0.131 Sum_probs=189.7
Q ss_pred CCCccEEEccCCcccccC-C--ccccCCCCCcEEecccccccccccccc--ccccccceeecccccccCCCC----cccc
Q 039137 108 FPHLVYLDLYNNELFGII-P--PQISNLSNLEYLDFSANKLFGQIPSGI--GLLTHLTVLHISRNWLSGSIP----HEVG 178 (912)
Q Consensus 108 l~~L~~L~L~~n~l~~~~-p--~~~~~l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~p----~~~~ 178 (912)
-..++.|.+.++.++... . ..+..+++|++|+|++|++++.+|..+ +.+++|++|+|++|.+++..| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 345788899888775321 1 123345779999999999999999988 899999999999999998666 4456
Q ss_pred CcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCc--c--ccccccccccceeecccccccCcccc----ccc
Q 039137 179 QLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGS--I--PQEIGNLKSLFDLELCINQLSGAIPL----SIS 250 (912)
Q Consensus 179 ~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~l~~n~l~~~~p~----~~~ 250 (912)
.+++|++|+|++|++.+..|..++++++|++|+|++|++.+. + +..++++++|++|++++|+++ .++. .++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 799999999999999988889999999999999999998753 2 234578999999999999997 3333 357
Q ss_pred cccccceeeeccccCcccCCcccCCc---cccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCc
Q 039137 251 NLTNLRFLFLYHNELSGIIPQEIGNL---KKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNL 327 (912)
Q Consensus 251 ~l~~L~~L~L~~N~l~~~~~~~l~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 327 (912)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L 296 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEV 296 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCc
Confidence 88999999999999998888888777 69999999999999 6677664 8999999999999975 32 6889999
Q ss_pred cEEEccCCcCcc
Q 039137 328 TFIDLSNNSFFG 339 (912)
Q Consensus 328 ~~L~Ls~N~l~~ 339 (912)
+.|+|++|+++.
T Consensus 297 ~~L~L~~N~l~~ 308 (310)
T 4glp_A 297 DNLTLDGNPFLV 308 (310)
T ss_dssp SCEECSSTTTSC
T ss_pred cEEECcCCCCCC
Confidence 999999999864
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.1e-22 Score=220.13 Aligned_cols=214 Identities=23% Similarity=0.302 Sum_probs=139.5
Q ss_pred cccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEec
Q 039137 277 KKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDV 356 (912)
Q Consensus 277 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 356 (912)
.++..+.+..+.+...+ .+..+++|++|++++|.++.. + .+..+++|+.|+|++|.+.+..+ +..+++|+.|++
T Consensus 19 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L 92 (308)
T 1h6u_A 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (308)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEc
Confidence 44455556666655432 244566777777777776643 2 46667777777777777765444 666777777777
Q ss_pred cCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCcc
Q 039137 357 SINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNF 436 (912)
Q Consensus 357 s~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 436 (912)
++|++++. + .+..+++|++|+|++|++++. + .+..+++|++|++++|++++..+ +..+++|++|+|++|++++.
T Consensus 93 ~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~ 166 (308)
T 1h6u_A 93 SGNPLKNV-S-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL 166 (308)
T ss_dssp CSCCCSCC-G-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCc-h-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC
Confidence 77776643 2 466667777777777777643 2 26677777777777777765433 66677777777777777764
Q ss_pred ccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCC
Q 039137 437 VPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGL 508 (912)
Q Consensus 437 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 508 (912)
.+ +..+++|+.|+|++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|++++|++++.
T Consensus 167 ~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 167 TP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred hh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 33 6677777777777777765433 6677777777777777765543 66677777777777777654
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.1e-22 Score=213.30 Aligned_cols=181 Identities=24% Similarity=0.255 Sum_probs=126.7
Q ss_pred CCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccC
Q 039137 351 LSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSA 430 (912)
Q Consensus 351 L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 430 (912)
.+.++++++.++ .+|..+. ++++.|+|++|++++..+..+.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 344555555554 3343332 3566666666666666666666677777777777777766666677777777777777
Q ss_pred cccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCc
Q 039137 431 NNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIP 510 (912)
Q Consensus 431 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p 510 (912)
|+++++.+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 77777666677777777777777777776666667777777777777777777666677777777777777777777777
Q ss_pred ccccccccceEEEccCCccccCCC
Q 039137 511 RCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 511 ~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
..|..+++|+.|++++|+++|...
T Consensus 173 ~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 173 GAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHhCCCCCCEEEeeCCceeCCcc
Confidence 777777888888888888877543
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.88 E-value=2.3e-22 Score=204.47 Aligned_cols=182 Identities=26% Similarity=0.294 Sum_probs=117.7
Q ss_pred CccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccc
Q 039137 73 CAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSG 152 (912)
Q Consensus 73 C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 152 (912)
|.|.+|.|+..+- +.+ ...-.++|++|+|++|++++..+..|.++++|++|+|++|++++..+..
T Consensus 7 C~~~~v~c~~~~l-~~~--------------p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (208)
T 2o6s_A 7 CSGTTVECYSQGR-TSV--------------PTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV 71 (208)
T ss_dssp EETTEEECCSSCC-SSC--------------CSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred ECCCEEEecCCCc-cCC--------------CCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhh
Confidence 7999999975321 111 1122457788888888888666666778888888888888887555555
Q ss_pred cccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccc
Q 039137 153 IGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLF 232 (912)
Q Consensus 153 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 232 (912)
|..+++|++|+|++|.+++..+..++.+++|++|++++|++++..+..+.++++|++|+|++|.+++..+..+.++++|+
T Consensus 72 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 151 (208)
T 2o6s_A 72 FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQ 151 (208)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred cCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCcc
Confidence 67778888888888877755555567777777777777777755555566666666666666666654444555555666
Q ss_pred eeecccccccCccccccccccccceeeeccccCcccCCcccCCc
Q 039137 233 DLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNL 276 (912)
Q Consensus 233 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l 276 (912)
.|++++|.+.+ .+++|++|+++.|+++|.+|..++.+
T Consensus 152 ~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 152 YIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp EEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred EEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 66665555442 23345555555555555555544443
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.1e-22 Score=220.23 Aligned_cols=192 Identities=24% Similarity=0.366 Sum_probs=99.0
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEE
Q 039137 107 SFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQL 186 (912)
Q Consensus 107 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 186 (912)
.+++|++|++++|+++. +| .+..+++|++|+|++|++++ +|. +..+++|++|+|++|.+++ +| .++.+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEE
Confidence 45566666666666653 33 46666666666666666653 333 6666666666666666653 32 45566666666
Q ss_pred EccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCc
Q 039137 187 ALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS 266 (912)
Q Consensus 187 ~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 266 (912)
++++|++++ +|. +.++++|++|++++|.+++..+ ++++++|+.|++++|++++..+ +..+++|+.|++++|+++
T Consensus 113 ~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 666666653 222 5555555555555555553322 4455555555555555543222 444455555555555544
Q ss_pred ccCCcccCCccccchhhhccCccCCCCccccccccccceEeccccccc
Q 039137 267 GIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLT 314 (912)
Q Consensus 267 ~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~ 314 (912)
+..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 3322 344444444444444444322 1334444444444444443
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=6.7e-22 Score=218.25 Aligned_cols=98 Identities=21% Similarity=0.207 Sum_probs=38.5
Q ss_pred cccccccCcccCccccccccccccccEEEecc-cccccccchhhhcccccceeeccccccCccccccccccccccccccc
Q 039137 423 LEYLDLSANNLSNFVPESLGSLVKLYYLNLSH-NKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 501 (912)
Q Consensus 423 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls 501 (912)
++.|+|++|+|+.+.+..| ...+|+.|++++ |.++.+.+..|.++++|++|||++|+|+...+..|.++++|+.+++
T Consensus 156 l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~- 233 (350)
T 4ay9_X 156 SVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST- 233 (350)
T ss_dssp CEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC-
T ss_pred hhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC-
Confidence 3344444444443322222 223444444432 3333222233444444444444444444433333333333333332
Q ss_pred CccccCCCcccccccccceEEEcc
Q 039137 502 YNNLSGLIPRCFEEMHGLLHIDIS 525 (912)
Q Consensus 502 ~N~l~~~~p~~~~~l~~L~~l~ls 525 (912)
++++.. | .+..+++|+.++++
T Consensus 234 -~~l~~l-P-~l~~l~~L~~l~l~ 254 (350)
T 4ay9_X 234 -YNLKKL-P-TLEKLVALMEASLT 254 (350)
T ss_dssp -TTCCCC-C-CTTTCCSCCEEECS
T ss_pred -CCcCcC-C-CchhCcChhhCcCC
Confidence 122222 2 24445555555554
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.4e-22 Score=233.17 Aligned_cols=193 Identities=23% Similarity=0.284 Sum_probs=128.1
Q ss_pred CccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEcc
Q 039137 110 HLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALD 189 (912)
Q Consensus 110 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 189 (912)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| +.+++|++|+|++|.+++ +|. ++. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 35678888888886 676663 78889999988887 677 457888888888888885 776 655 78888888
Q ss_pred CCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccC
Q 039137 190 SNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGII 269 (912)
Q Consensus 190 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 269 (912)
+|++++ +|. .+++|++|+|++|.+++ +|. .+++|+.|+|++|++++ +|. |. ++|++|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 888875 565 56777777777777775 444 45666666666666664 444 44 66666666666666 33
Q ss_pred CcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCC
Q 039137 270 PQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGR 347 (912)
Q Consensus 270 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 347 (912)
|. +.. +| +...+.|+.|+|++|.|+. +|..+..+++|+.|+|++|++++..|..+..
T Consensus 196 p~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 196 PA-VPV--RN-----------------HHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp CC-CC---------------------------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHH
T ss_pred hh-HHH--hh-----------------hcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHH
Confidence 33 332 22 0111233667777777764 4444455777777777777777776666544
No 350
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.6e-21 Score=213.56 Aligned_cols=221 Identities=19% Similarity=0.163 Sum_probs=103.8
Q ss_pred ccceeecccccccCccccccccccccceeeeccccCcccCC-cccCCccccch-hhhccCccCCCCccccccccccceEe
Q 039137 230 SLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIP-QEIGNLKKLNS-LLLAKNHFRGTVPKSFRNLTDLVKLR 307 (912)
Q Consensus 230 ~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~ 307 (912)
++++|+|++|+|+...+..|.++++|++|+|++|++.+.+| .+|.++++|.+ +.++.|+++...|..|..+++|++|+
T Consensus 31 ~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~ 110 (350)
T 4ay9_X 31 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLL 110 (350)
T ss_dssp TCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEE
T ss_pred CCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccc
Confidence 34444444444443223344455555555555555433222 23444444432 33444555544455555555555555
Q ss_pred cccccccCCCCcccCCCCCccEEEccC-CcCcccccccCCCCC-CCCEEeccCCcccccccccccccccccEEEccC-cc
Q 039137 308 LNQNYLTGNISETFGTYPNLTFIDLSN-NSFFGEILSDWGRCP-QLSLLDVSINNISGSIPLEIGESLQLQYLDLSS-NY 384 (912)
Q Consensus 308 L~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~-N~ 384 (912)
+++|+++...+..+....++..|++.+ |++....+..|..+. .++.|++++|+|+ .+|.......+|++|++++ |.
T Consensus 111 l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 111 ISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTT
T ss_pred ccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCc
Confidence 555555554444444445555555543 334333333444332 3455555555555 2333333344556666653 44
Q ss_pred ccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEeccc
Q 039137 385 IVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHN 455 (912)
Q Consensus 385 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 455 (912)
++...+..|.++++|+.|+|++|+|+...+..+.++++|+.+++ +.++. .| .+..+++|+.++++++
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~-lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKK-LP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCC-CC-CTTTCCSCCEEECSCH
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCc-CC-CchhCcChhhCcCCCC
Confidence 44322334555556666666666655443344444444444433 22332 23 2455555555555543
No 351
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=6.9e-22 Score=210.23 Aligned_cols=155 Identities=15% Similarity=0.126 Sum_probs=122.2
Q ss_pred HHHHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCc-----h---------HHHHHHHHHHHHHhhcCC
Q 039137 632 EIISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEM-----S---------FQQEEFLNEIQALTEIRH 697 (912)
Q Consensus 632 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-----~---------~~~~~~~~Ei~~l~~l~h 697 (912)
........|.+.+.||+|+||.||+|++.+|+.||+|+++....... . .....+.+|+++++.++|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 44445566778899999999999999997899999999864322110 0 135678999999999994
Q ss_pred CccccEEEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEE
Q 039137 698 RNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLL 777 (912)
Q Consensus 698 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill 777 (912)
+++.+++.. +..++||||+++++|.+ +.. .+...++.|++.|++|||++ +|+||||||+||++
T Consensus 164 ---~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl 226 (282)
T 1zar_A 164 ---LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLV 226 (282)
T ss_dssp ---SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEE
T ss_pred ---CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEE
Confidence 555555433 56799999999999988 411 23557999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccccccCCCCCCccccccccccccccccc
Q 039137 778 DLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAY 817 (912)
Q Consensus 778 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~ 817 (912)
+ ++.+||+|||+|+. +..|+|||++.
T Consensus 227 ~-~~~vkl~DFG~a~~-------------~~~~~a~e~l~ 252 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVE-------------VGEEGWREILE 252 (282)
T ss_dssp E-TTEEEECCCTTCEE-------------TTSTTHHHHHH
T ss_pred E-CCcEEEEECCCCeE-------------CCCCCHHHHHH
Confidence 9 99999999999963 33478899764
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.85 E-value=8.4e-21 Score=192.94 Aligned_cols=180 Identities=25% Similarity=0.234 Sum_probs=153.0
Q ss_pred EEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCc
Q 039137 113 YLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNF 192 (912)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 192 (912)
.+++++++++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..|+.+++|++|++++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 4667778877 456544 4589999999999987666778999999999999999996666678999999999999999
Q ss_pred CCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcc
Q 039137 193 LNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQE 272 (912)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 272 (912)
+++..+..|.++++|++|+|++|.+++..+..+.++++|+.|++++|++++..+..+..+++|++|++++|.+.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----- 162 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----- 162 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-----
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-----
Confidence 997767778999999999999999997777778999999999999999997777778899999999999997764
Q ss_pred cCCccccchhhhccCccCCCCccccccccc
Q 039137 273 IGNLKKLNSLLLAKNHFRGTVPKSFRNLTD 302 (912)
Q Consensus 273 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 302 (912)
.+++|+.|+++.|+++|.+|..++.++.
T Consensus 163 --~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 --TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp --CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred --CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3467899999999999999988877654
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=2.8e-21 Score=224.17 Aligned_cols=188 Identities=23% Similarity=0.346 Sum_probs=99.3
Q ss_pred ccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEcc
Q 039137 302 DLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLS 381 (912)
Q Consensus 302 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~ 381 (912)
+|+.|+|++|.+++ +|..+ .++|+.|+|++|+|+ .+| ..+++|+.|++++|+|++ +|. +.. +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 45555555555554 22222 144555555555554 222 334555555555555554 343 333 55666666
Q ss_pred CccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEeccccccccc
Q 039137 382 SNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQI 461 (912)
Q Consensus 382 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 461 (912)
+|+|++ +|. .+++|+.|+|++|++++ +|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 666554 333 34556666666666654 333 34556666666666655 333 44 56666666666665 34
Q ss_pred chhhhccccc-------ceeeccccccCcccccccccccccccccccCccccCCCcccccccc
Q 039137 462 PIELDNLIHL-------SELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMH 517 (912)
Q Consensus 462 ~~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 517 (912)
|. +.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|+|++.+|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 44 333 45 666666666653 455555566666666666666666666555543
No 354
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=6.2e-22 Score=238.49 Aligned_cols=259 Identities=20% Similarity=0.169 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHHhcccCCcccCCCcccCCCCCCCCCCCccceeEecCCCCeEEEeeccccccccccccccCCCCCccE
Q 039137 34 NSAEEAHALVKWKASLEVHSRSLLHSWSLSSVNATKISPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVY 113 (912)
Q Consensus 34 ~~~~~~~all~~k~~~~~~~~~~l~~w~~~~~~~~~~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~ 113 (912)
....+++||+++..+.....+..-++|.. +...++.|.+++++. .+++.+++..+++... ....++.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~-------~~~~l~~ 195 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTG-----DSTPSGTATNSAVST-PLTPKIELFANGKDEA-------NQALLQH 195 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcC-----CCCccccCCCceecC-CccceEEeeCCCCCcc-------hhhHhhc
Confidence 34567899999998876544444555642 234567899999874 6788887766555442 1123444
Q ss_pred EEccCCcccc---------cCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCccccc
Q 039137 114 LDLYNNELFG---------IIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLN 184 (912)
Q Consensus 114 L~L~~n~l~~---------~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 184 (912)
++|+.|.|.+ ..|..|..++.|++|+|++|++. .+|..+..+++|++|+|++|.|+ .+|..|++|++|+
T Consensus 196 l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 273 (727)
T 4b8c_D 196 KKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLR 273 (727)
T ss_dssp --------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCC
T ss_pred CccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCC
Confidence 5555554432 23455566666666666666665 55555556666666666666665 5555566666666
Q ss_pred EEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeecccc
Q 039137 185 QLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNE 264 (912)
Q Consensus 185 ~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 264 (912)
+|+|++|+|+ .+|..|++|++|++|+|++|.++ .+|..|++|++|+.|+|++|++++.+|..+..+..
T Consensus 274 ~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~---------- 341 (727)
T 4b8c_D 274 VLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSV---------- 341 (727)
T ss_dssp EEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHH----------
T ss_pred EEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcch----------
Confidence 6666666655 45555555555555555555554 44444555555555555555555444444433211
Q ss_pred CcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccc--------cccCCCCcccCCCCCccEEEccCCc
Q 039137 265 LSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQN--------YLTGNISETFGTYPNLTFIDLSNNS 336 (912)
Q Consensus 265 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n--------~l~~~~~~~~~~l~~L~~L~Ls~N~ 336 (912)
.+..|+|++|.+++.+|.. |+.|+++.| .+.+..+..+..+..+....+++|-
T Consensus 342 -------------~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Ni 402 (727)
T 4b8c_D 342 -------------TGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNT 402 (727)
T ss_dssp -------------HHHHHHHHHCCCCCCCCCC-----------------------------------------------C
T ss_pred -------------hhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccc
Confidence 1122445555555444432 223333333 3333344445566666777778887
Q ss_pred Cc
Q 039137 337 FF 338 (912)
Q Consensus 337 l~ 338 (912)
+.
T Consensus 403 l~ 404 (727)
T 4b8c_D 403 LC 404 (727)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=1.2e-20 Score=221.51 Aligned_cols=193 Identities=26% Similarity=0.338 Sum_probs=125.7
Q ss_pred ccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccC
Q 039137 111 LVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDS 190 (912)
Q Consensus 111 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 190 (912)
+..++|..+.+...++ +..|++|++|+|++|.+. .+| .++.+++|+.|+|++|.+++..| +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 4445555566554432 566677777777777775 344 46777777777777777774433 67777777777777
Q ss_pred CcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCC
Q 039137 191 NFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIP 270 (912)
Q Consensus 191 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 270 (912)
|.+++ +| .+.++++|++|+|++|.+.+ + ..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++..|
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 77763 33 56777777777777777764 2 3466677777777777777654 456677777777777777776544
Q ss_pred cccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCc
Q 039137 271 QEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISE 319 (912)
Q Consensus 271 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 319 (912)
+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.+++.+..
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCccc
Confidence 66667777777777777643 3466666777777777766654333
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=7.9e-20 Score=195.84 Aligned_cols=191 Identities=25% Similarity=0.271 Sum_probs=102.5
Q ss_pred ccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEe
Q 039137 276 LKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLD 355 (912)
Q Consensus 276 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 355 (912)
+.++..+.+..+.+++.. .+..+++|+.|++++|.++.. ..+..+++|+.|+|++|++++..+ +..+++|+.|+
T Consensus 23 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~ 96 (291)
T 1h6t_A 23 FAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLF 96 (291)
T ss_dssp HHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEE
Confidence 344555666666665432 345667777777777777654 235666777777777777665443 56666666666
Q ss_pred ccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCc
Q 039137 356 VSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSN 435 (912)
Q Consensus 356 Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 435 (912)
+++|++++ ++ .+..+++|++|+|++|++++. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++
T Consensus 97 l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 97 LDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp CCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 66666653 22 255555566666666655532 2344555555555555555532 334444555555555555544
Q ss_pred cccccccccccccEEEecccccccccchhhhcccccceeeccccccC
Q 039137 436 FVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG 482 (912)
Q Consensus 436 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 482 (912)
..+ +..+++|++|+|++|++++. + .+..+++|+.|++++|+++
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 333 44444555555555544432 2 2444444444444444443
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=3.2e-20 Score=205.68 Aligned_cols=157 Identities=26% Similarity=0.234 Sum_probs=85.9
Q ss_pred ccEEEccCccccCCCCcccc-ccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEec
Q 039137 375 LQYLDLSSNYIVGEIPTQLG-NIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLS 453 (912)
Q Consensus 375 L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 453 (912)
++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|..+++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44555555555544444444 45555555555555554444555555555555555555555555555555555555555
Q ss_pred ccccccccchhhhcccccceeeccccccCccccccc---ccccccccccccCccccCCCccccccccc--ceEEEccCCc
Q 039137 454 HNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRI---CRMESLEKLNLSYNNLSGLIPRCFEEMHG--LLHIDISYNK 528 (912)
Q Consensus 454 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~ls~N~l~~~~p~~~~~l~~--L~~l~ls~N~ 528 (912)
+|+|++..|..|.++++|++|+|++|+|++..+..| ..+++|+.|+|++|+|+++.+..|..++. ++.|++++|+
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 555555555555555555555555555555444444 34556666666666666555555555554 2556666666
Q ss_pred ccc
Q 039137 529 LEG 531 (912)
Q Consensus 529 l~~ 531 (912)
|.|
T Consensus 201 ~~C 203 (361)
T 2xot_A 201 LEC 203 (361)
T ss_dssp EEC
T ss_pred ccC
Confidence 655
No 358
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.4e-19 Score=186.74 Aligned_cols=158 Identities=24% Similarity=0.234 Sum_probs=89.1
Q ss_pred CCCCCccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccc
Q 039137 69 KISPCAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQ 148 (912)
Q Consensus 69 ~~~~C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 148 (912)
+...|+|.+|.|+..+ +.. ++. .-.++|++|+|++|++++..|..|..+++|++|+|++|+|++.
T Consensus 15 ~~~~Cs~~~v~c~~~~-l~~-----------ip~---~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i 79 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKR-HAS-----------VPA---GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGAL 79 (229)
T ss_dssp TTCEEETTEEECTTSC-CSS-----------CCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCEEeCCEeEccCCC-cCc-----------cCC---CCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCc
Confidence 4578999999997421 111 110 1125666777777777666666666666677777776666543
Q ss_pred cccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccc
Q 039137 149 IPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNL 228 (912)
Q Consensus 149 ~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 228 (912)
.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+++ .+|..+.++++|++|+|++|++++..+..+..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 158 (229)
T 3e6j_A 80 PVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRL 158 (229)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCC
Confidence 3444566666666666666666444444555566666666555555 445555555555555555555544333344444
Q ss_pred cccceeeccccccc
Q 039137 229 KSLFDLELCINQLS 242 (912)
Q Consensus 229 ~~L~~L~l~~n~l~ 242 (912)
++|+.|++++|.+.
T Consensus 159 ~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 159 SSLTHAYLFGNPWD 172 (229)
T ss_dssp TTCCEEECTTSCBC
T ss_pred CCCCEEEeeCCCcc
Confidence 44444444444443
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.8e-20 Score=220.08 Aligned_cols=193 Identities=23% Similarity=0.333 Sum_probs=128.5
Q ss_pred CCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeee
Q 039137 132 LSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILY 211 (912)
Q Consensus 132 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 211 (912)
+..+..++|+.+.+...++ +..|++|+.|++++|.+. .+| .++.+++|+.|+|++|++++..| +.++++|++|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3446667777777764433 567888888888888887 444 57788888888888888875444 77777888888
Q ss_pred eccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCC
Q 039137 212 LYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRG 291 (912)
Q Consensus 212 L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 291 (912)
|++|.+.+ +| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC
Confidence 88887764 33 567777777777777777642 3466677777777777777654 456666666666666666665
Q ss_pred CCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccc
Q 039137 292 TVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGE 340 (912)
Q Consensus 292 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (912)
..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.+.
T Consensus 168 ~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 168 IVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred chh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 444 56666666666666666543 2355556666666666655443
No 360
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=7.6e-20 Score=187.27 Aligned_cols=156 Identities=19% Similarity=0.249 Sum_probs=121.4
Q ss_pred cEEEccCccccCCCCccccccccccEEEccCCcccCCCc-cccccccccccccccCcccCccccccccccccccEEEecc
Q 039137 376 QYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIP-RELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSH 454 (912)
Q Consensus 376 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 454 (912)
+.+++++|.++ .+|..+. ..++.|+|++|++++..| ..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46677777776 3555443 245677777777776544 4577788888888888888887777888888888888888
Q ss_pred cccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 455 NKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 455 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|+|.|..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88887777778888888888888888888888888888888888888888888888888888888888888888887543
No 361
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=7.4e-20 Score=187.36 Aligned_cols=153 Identities=22% Similarity=0.292 Sum_probs=115.7
Q ss_pred cEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEeccc
Q 039137 376 QYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHN 455 (912)
Q Consensus 376 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 455 (912)
+.+++++|.++ .+|..+. ++|+.|++++|++++..+..|..+++|++|+|++|+|+++.|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666666 4454443 46777777777777666667777777777777777777777777777888888888888
Q ss_pred ccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCcccc
Q 039137 456 KLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 456 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 531 (912)
+|+...+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|+|.|
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 8876666667778888888888888877777778888888888888888888777778888888888888888876
No 362
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=7.5e-20 Score=196.01 Aligned_cols=192 Identities=24% Similarity=0.304 Sum_probs=116.5
Q ss_pred cccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEec
Q 039137 229 KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRL 308 (912)
Q Consensus 229 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 308 (912)
..+..+.+..+.+++.. .+..+++|+.|++++|.++.. ..+..+++|++|+|++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~------------------ 81 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLT------------------ 81 (291)
T ss_dssp HHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCC------------------
T ss_pred HHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccC------------------
Confidence 33444445555544322 233455555666655555532 12444455555555555554
Q ss_pred ccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCC
Q 039137 309 NQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGE 388 (912)
Q Consensus 309 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 388 (912)
+..+ +..+++|+.|+|++|.+.+. ..+..+++|+.|++++|++++. ..+..+++|++|++++|++++.
T Consensus 82 ------~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~ 149 (291)
T 1h6t_A 82 ------DIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI 149 (291)
T ss_dssp ------CCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC
T ss_pred ------CCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc
Confidence 3332 44455555555555555431 2255556666666666666542 3456667777777777777654
Q ss_pred CCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccc
Q 039137 389 IPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQ 460 (912)
Q Consensus 389 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 460 (912)
..+..+++|+.|++++|++++..| +..+++|++|+|++|.++++ + .+..+++|+.|++++|+++..
T Consensus 150 --~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 150 --TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp --GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred --hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 567777788888888888876544 77788888888888888774 3 478888888888888888753
No 363
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=2.5e-21 Score=225.94 Aligned_cols=201 Identities=22% Similarity=0.252 Sum_probs=101.7
Q ss_pred ccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccce
Q 039137 226 GNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVK 305 (912)
Q Consensus 226 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 305 (912)
..+++|+.|+|+.|+++ .+|..++++++|+.|++++|... ..+..+ +..+.+.+.+|..+..+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l----------~~l~~l-l~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCL----------LTIILL-MRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHH----------HHHHHH-HHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhh----------hhHHHH-HHhcccccCCHHHHHHHHhccc
Confidence 45667777777777776 66777777777777777555321 011111 1122244566667777777777
Q ss_pred Ee-cccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCcc
Q 039137 306 LR-LNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNY 384 (912)
Q Consensus 306 L~-L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~ 384 (912)
|+ ++.|.+. +|+.+.+++|.+....+. .|+.|++++|+|++
T Consensus 414 L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~--------------------- 455 (567)
T 1dce_A 414 VDPMRAAYLD-----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV--------------------- 455 (567)
T ss_dssp HCGGGHHHHH-----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS---------------------
T ss_pred Ccchhhcccc-----------hhhhhhhhcccccccCcc------CceEEEecCCCCCC---------------------
Confidence 77 5655443 344455555554332221 24444444444442
Q ss_pred ccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEeccccccccc-ch
Q 039137 385 IVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQI-PI 463 (912)
Q Consensus 385 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~ 463 (912)
+|. ++.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|++ +| .|..+++|+.|+|++|+|++.. |.
T Consensus 456 ----lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~ 527 (567)
T 1dce_A 456 ----LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQ 527 (567)
T ss_dssp ----CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTG
T ss_pred ----CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcH
Confidence 232 444444444444444444 344444444445555555555444 23 4444555555555555554443 44
Q ss_pred hhhcccccceeeccccccCcc
Q 039137 464 ELDNLIHLSELDLSHNFLGEK 484 (912)
Q Consensus 464 ~~~~l~~L~~L~Ls~N~l~~~ 484 (912)
.+..+++|+.|+|++|+|++.
T Consensus 528 ~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 528 PLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp GGGGCTTCCEEECTTSGGGGS
T ss_pred HHhcCCCCCEEEecCCcCCCC
Confidence 555555555555555555443
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=4.2e-19 Score=183.07 Aligned_cols=156 Identities=27% Similarity=0.329 Sum_probs=111.9
Q ss_pred ccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecc
Q 039137 375 LQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSH 454 (912)
Q Consensus 375 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 454 (912)
.+.++.++++++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|+.+.+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 455666666665 4454433 5677777777777766677777777777777777777766666677777777777777
Q ss_pred cccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 455 NKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 455 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.|..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7777666666777777777777777776 456667777777777777777777766777777888888888888777544
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=5.3e-21 Score=223.24 Aligned_cols=202 Identities=18% Similarity=0.137 Sum_probs=132.3
Q ss_pred CCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccch
Q 039137 202 GNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNS 281 (912)
Q Consensus 202 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~ 281 (912)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|......|. .+..+.+.+.+|..++++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~-----------ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIIL-----------LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHH-----------HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHH-----------HHHhcccccCCHHHHHHHHhccc
Confidence 67889999999999997 8999999999999999977652111111 01122334456666777777777
Q ss_pred hh-hccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCc
Q 039137 282 LL-LAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINN 360 (912)
Q Consensus 282 L~-L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 360 (912)
|+ ++.|.+ .+|..+.+++|.++...+. .|+.|+|++|.+++ +|. ++.+++|+.|+|++|+
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCcc------CceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 77 555543 3455566666666643322 36777777777765 343 6677777777777777
Q ss_pred ccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCC-ccccccccccccccccCcccCccc
Q 039137 361 ISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCI-PRELGSLINLEYLDLSANNLSNFV 437 (912)
Q Consensus 361 l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~ 437 (912)
|+ .+|..++.+++|++|+|++|+|++ +| .++++++|+.|+|++|++++.. |..+..+++|+.|+|++|.+++.+
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 76 556666666677777777776664 44 5666666666666666666554 566666666666666666665543
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=1.9e-19 Score=199.35 Aligned_cols=108 Identities=24% Similarity=0.206 Sum_probs=48.2
Q ss_pred ccEEEccCCcccccCCcccc-CCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEcc
Q 039137 111 LVYLDLYNNELFGIIPPQIS-NLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALD 189 (912)
Q Consensus 111 L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~ 189 (912)
++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 44445555544444444443 44444444444444443333444444444444444444443333334444444444444
Q ss_pred CCcCCCCCCccCCCCccceeeeeccCCCc
Q 039137 190 SNFLNGSIPRSLGNLTHVVILYLYNNSFF 218 (912)
Q Consensus 190 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~ 218 (912)
+|+|++..|..|.++++|++|+|++|.++
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCC
Confidence 44444333344444444444444444443
No 367
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=5.9e-19 Score=180.65 Aligned_cols=131 Identities=21% Similarity=0.159 Sum_probs=61.1
Q ss_pred cEEeccccccccccc-cccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeecc
Q 039137 136 EYLDFSANKLFGQIP-SGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYN 214 (912)
Q Consensus 136 ~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~ 214 (912)
++|+|++|++++..| ..|+.+++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 444444444443322 2244444444444444444433333444444444444444444444444444444444444444
Q ss_pred CCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCc
Q 039137 215 NSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELS 266 (912)
Q Consensus 215 n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 266 (912)
|++++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|.+.
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 4444444444444444444444444444444444444555555555555444
No 368
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=6.3e-19 Score=180.41 Aligned_cols=134 Identities=21% Similarity=0.234 Sum_probs=82.6
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 45677777777777655556777777777777777776666666666777777777777666433344556666666666
Q ss_pred cCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeeccccccc
Q 039137 189 DSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLS 242 (912)
Q Consensus 189 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 242 (912)
++|++++..|..|.++++|++|+|++|.+++..+..|..+++|+.|++++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666555555655666666666655555544444555555555555555443
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=1.3e-18 Score=183.26 Aligned_cols=171 Identities=24% Similarity=0.240 Sum_probs=121.4
Q ss_pred CccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEE
Q 039137 275 NLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLL 354 (912)
Q Consensus 275 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 354 (912)
++.+++.+++++|.+++.. .+..+++|+.|++++|.++.. + .+..+++|+.|+|++|++++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4566777777777777432 567777888888888877753 2 56777778888888887776554 7777777777
Q ss_pred eccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccC
Q 039137 355 DVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLS 434 (912)
Q Consensus 355 ~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 434 (912)
++++|++++. |... . ++|++|+|++|++++. ..+..+++|+.|++++|++++. + .+..+++|++|+|++|+++
T Consensus 91 ~L~~N~l~~l-~~~~-~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNL-NGIP-S-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCC-TTCC-C-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCc-Cccc-c-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 7777777743 3222 2 6788888888877753 3477777788888888877754 3 5777777888888888777
Q ss_pred ccccccccccccccEEEecccccccc
Q 039137 435 NFVPESLGSLVKLYYLNLSHNKLSQQ 460 (912)
Q Consensus 435 ~~~~~~~~~l~~L~~L~Ls~N~l~~~ 460 (912)
+. ..+..+++|+.|++++|++++.
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ch--HHhccCCCCCEEeCCCCcccCC
Confidence 65 5677777778888888777654
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=1.6e-19 Score=217.46 Aligned_cols=224 Identities=19% Similarity=0.219 Sum_probs=119.3
Q ss_pred CCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEc
Q 039137 109 PHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLAL 188 (912)
Q Consensus 109 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l 188 (912)
++++.|+|++|.+.. +|. ..|+.++|+.|.|.+ ++++.|.+. ..|..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEEC
Confidence 567788888888775 232 235566666666542 244455555 56777778888888888
Q ss_pred cCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCccc
Q 039137 189 DSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGI 268 (912)
Q Consensus 189 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 268 (912)
++|.+. .+|..+.++++|++|+|++|.++ .+|..|++|++|+.|+|++|+|+ .+|..|++|++|++|+|++|.|+ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 888877 67777778888888888888888 78888888999999999999988 77888999999999999999998 5
Q ss_pred CCcccCCccccchhhhccCccCCCCccccccccc-cceEecccccccCCCCcccCCCCCccEEEccCC--------cCcc
Q 039137 269 IPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTD-LVKLRLNQNYLTGNISETFGTYPNLTFIDLSNN--------SFFG 339 (912)
Q Consensus 269 ~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N--------~l~~ 339 (912)
+|..|+++++|++|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.| .+.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 6878999999999999999999998888876532 345889999999887764 556677776 3444
Q ss_pred cccccCCCCCCCCEEeccCCcccc
Q 039137 340 EILSDWGRCPQLSLLDVSINNISG 363 (912)
Q Consensus 340 ~~~~~~~~l~~L~~L~Ls~N~l~~ 363 (912)
..+..+..+..+....+++|-+.+
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp --------------------CCCG
T ss_pred cccchhhcccccceeeeecccccc
Confidence 444445566677777888887753
No 371
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=6.1e-19 Score=192.78 Aligned_cols=217 Identities=14% Similarity=0.082 Sum_probs=141.6
Q ss_pred ccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcc----cccccccccccccc
Q 039137 300 LTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNI----SGSIPLEIGESLQL 375 (912)
Q Consensus 300 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l----~~~~~~~~~~~~~L 375 (912)
+++|+.|+|.+ .++.+...+|.++++|+.|++++|.+....+.+|..+.++..+.+..+.. .......|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 66656666666666677777766666666666666666666555554322 11223334444445
Q ss_pred c-EEEccCccccCCCCccc----cccccccEEEccCCcccCCCcccc-ccccccccccccCcccCccccccccccccccE
Q 039137 376 Q-YLDLSSNYIVGEIPTQL----GNIIYLNRLSLSGNKLSGCIPREL-GSLINLEYLDLSANNLSNFVPESLGSLVKLYY 449 (912)
Q Consensus 376 ~-~L~L~~N~l~~~~~~~l----~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 449 (912)
+ .+.+.... .++..+ ....++..+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+..|.++++|+.
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 4 34333221 111111 12345556666554222 111112 23678888888888888877788888888888
Q ss_pred EEecccccccccchhhhcccccc-eeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEE
Q 039137 450 LNLSHNKLSQQIPIELDNLIHLS-ELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHID 523 (912)
Q Consensus 450 L~Ls~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ 523 (912)
|+|++| ++.+.+.+|.++.+|+ .|++.+ .++.+.+.+|.++++|+.|++++|+++.+.+.+|.++++|+.++
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 888887 7767777888888888 888887 77777778888888888888888888888888888888888876
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=1.3e-18 Score=174.84 Aligned_cols=153 Identities=19% Similarity=0.221 Sum_probs=76.0
Q ss_pred CCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccE
Q 039137 106 SSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQ 185 (912)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 185 (912)
+.+++|++|++++|+++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34455556666666555 334 4555556666666655443 2234555555555555555555545555555555555
Q ss_pred EEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccC
Q 039137 186 LALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNEL 265 (912)
Q Consensus 186 L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 265 (912)
|++++|++++..|..++++++|++|++++|.+.+.+| .+..+++|+.|++++|++++ ++ .+..+++|++|++++|++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 5555555554445555555555555555554222233 34444444444444444442 12 344444444444444444
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.7e-18 Score=182.34 Aligned_cols=149 Identities=21% Similarity=0.276 Sum_probs=68.3
Q ss_pred cccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCcc
Q 039137 249 ISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLT 328 (912)
Q Consensus 249 ~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 328 (912)
+..+++|++|++++|+++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++..+. .. ++|+
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l~~~--~~-~~L~ 109 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNLNGI--PS-ACLS 109 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCCTTC--CC-SSCC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCcCcc--cc-Cccc
Confidence 3444444444444444442 22 34444444444444444443322 44444555555555554432211 11 4455
Q ss_pred EEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCc
Q 039137 329 FIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNK 408 (912)
Q Consensus 329 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~ 408 (912)
.|+|++|++++. ..+..+++|+.|++++|++++. + .+..+++|++|+|++|++++. ..+..+++|+.|++++|+
T Consensus 110 ~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~ 183 (263)
T 1xeu_A 110 RLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQK 183 (263)
T ss_dssp EEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEE
T ss_pred EEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCc
Confidence 555555555432 2344455555555555555432 2 344455555555555555433 334445555555555555
Q ss_pred cc
Q 039137 409 LS 410 (912)
Q Consensus 409 l~ 410 (912)
++
T Consensus 184 ~~ 185 (263)
T 1xeu_A 184 CV 185 (263)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=5.6e-18 Score=177.91 Aligned_cols=141 Identities=18% Similarity=0.173 Sum_probs=109.6
Q ss_pred CCCCCceeeecCceEEEEEEe-CCCCE--EEEEEccCCCCCC--------------------chHHHHHHHHHHHHHhhc
Q 039137 639 DFNAEHCIGKGGHGSVYRAKV-PSGEI--FAVKKFHSPLPGE--------------------MSFQQEEFLNEIQALTEI 695 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~--------------------~~~~~~~~~~Ei~~l~~l 695 (912)
-|++.+.||+|+||.||+|.+ .+|+. ||||+++...... .......+.+|+..++.+
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999988 68988 9999875432110 011234678999999999
Q ss_pred CCCcc--ccEEEEEEcCCeeeEEEeecCC-C----ChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHH-hCCCCCeee
Q 039137 696 RHRNI--VKFYGFCSHPKHSFIIYEYLES-G----SLDKILCNDASAKELGWTQRLNVIKGVADALFYLH-NNCFPPIVH 767 (912)
Q Consensus 696 ~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH 767 (912)
+|+++ +.++++ +..++||||+.+ | +|.++... .++.++..++.|++.|++||| ++ +|+|
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 88754 444443 367899999942 4 66665421 235678899999999999999 88 9999
Q ss_pred cCCCCCCeEEcCCCcEEEecccccccc
Q 039137 768 RDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 768 ~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
|||||+||+++. .++|+|||+|...
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred CCCCHHHEEEcC--cEEEEECcccccC
Confidence 999999999998 9999999999764
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=1e-18 Score=190.94 Aligned_cols=265 Identities=11% Similarity=0.043 Sum_probs=179.7
Q ss_pred ccccceeecccccccCccccccccccccceeeeccccCcccCCcccCC--------ccccchhhhccCccCCCCcccccc
Q 039137 228 LKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGN--------LKKLNSLLLAKNHFRGTVPKSFRN 299 (912)
Q Consensus 228 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~--------l~~L~~L~L~~N~l~~~~~~~~~~ 299 (912)
+++|+.|+|++|++.. ....-+.++.++.+.+..|. +.+.+|.+ +++|+.|+|.+ .++.+.+.+|.+
T Consensus 48 l~~L~~LdLs~n~i~~-~~~~~~~~~~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~ 122 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKM-YSGKAGTYPNGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKG 122 (329)
T ss_dssp CTTCCEEEEEEEEECC-EEESSSSSGGGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTT
T ss_pred hccCeEEecCcceeEE-ecCccccccccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhc
Confidence 5566666666666651 11111122234455555553 33355666 78888888877 777666677888
Q ss_pred ccccceEecccccccCCCCcccCCCCCccEEEccCCc----CcccccccCCCCCCCC-EEeccCCcc-cccccccccccc
Q 039137 300 LTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNS----FFGEILSDWGRCPQLS-LLDVSINNI-SGSIPLEIGESL 373 (912)
Q Consensus 300 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~----l~~~~~~~~~~l~~L~-~L~Ls~N~l-~~~~~~~~~~~~ 373 (912)
+++|+.|++++|.++...+.+|..+.++..+.+..+. ........|..+..|+ .+.+....- ...+...-....
T Consensus 123 ~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~ 202 (329)
T 3sb4_A 123 CDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPR 202 (329)
T ss_dssp CTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGG
T ss_pred CcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCcc
Confidence 8888888888888777777788777777777666532 2222334455566666 444443221 111111112345
Q ss_pred cccEEEccCccccCCCCccc-cccccccEEEccCCcccCCCccccccccccccccccCcccCcccccccccccccc-EEE
Q 039137 374 QLQYLDLSSNYIVGEIPTQL-GNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLY-YLN 451 (912)
Q Consensus 374 ~L~~L~L~~N~l~~~~~~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~-~L~ 451 (912)
+++.+.+.++-.. .....+ ..+++|+.|+|++|+++.+.+.+|.++++|+.|+|.+| ++.+.+.+|.++++|+ .++
T Consensus 203 ~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 203 DINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp GCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 6677777665322 111122 23678999999999998777778999999999999988 8888888999999999 999
Q ss_pred ecccccccccchhhhcccccceeeccccccCcccccccccccccccccc
Q 039137 452 LSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNL 500 (912)
Q Consensus 452 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 500 (912)
+.+ .++.+.+.+|.++++|+.|++++|+++.+.+..|.++++|+.++.
T Consensus 281 l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 281 LPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ecc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 988 787777889999999999999999998888889999999988864
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.3e-18 Score=171.19 Aligned_cols=154 Identities=18% Similarity=0.304 Sum_probs=104.4
Q ss_pred cccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccE
Q 039137 370 GESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYY 449 (912)
Q Consensus 370 ~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 449 (912)
+.+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34556666666666666 344 46666667777777775542 235666777777777777777666677777777777
Q ss_pred EEecccccccccchhhhcccccceeeccccc-cCcccccccccccccccccccCccccCCCcccccccccceEEEccCCc
Q 039137 450 LNLSHNKLSQQIPIELDNLIHLSELDLSHNF-LGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNK 528 (912)
Q Consensus 450 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~ 528 (912)
|+|++|++++..|..+..+++|++|++++|. ++. ++ .+..+++|+.|++++|++++.. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 7777777776667777777777777777776 543 34 5777777888888888777643 67777888888888887
Q ss_pred ccc
Q 039137 529 LEG 531 (912)
Q Consensus 529 l~~ 531 (912)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 653
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=3.9e-17 Score=163.25 Aligned_cols=110 Identities=25% Similarity=0.311 Sum_probs=56.9
Q ss_pred cccEEEccCccccCCCCc-cccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEe
Q 039137 374 QLQYLDLSSNYIVGEIPT-QLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNL 452 (912)
Q Consensus 374 ~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 452 (912)
+|++|+|++|+|++..+. .+..+++|++|+|++|++++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 455555555555433332 2445555555555555555444555555555555555555555554444555555555555
Q ss_pred cccccccccchhhhcccccceeeccccccCc
Q 039137 453 SHNKLSQQIPIELDNLIHLSELDLSHNFLGE 483 (912)
Q Consensus 453 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 483 (912)
++|+|++..|..|..+++|++|+|++|.+++
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 5555555555555555555555555555543
No 378
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=2.3e-17 Score=164.94 Aligned_cols=172 Identities=22% Similarity=0.245 Sum_probs=123.2
Q ss_pred cEEEccCccccCCCCccccccccccEEEccCCcccCCCcc-ccccccccccccccCcccCccccccccccccccEEEecc
Q 039137 376 QYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPR-ELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSH 454 (912)
Q Consensus 376 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 454 (912)
+++++++|+++ .+|..+.. +|++|++++|++++..+. .|..+++|++|+|++|+|+++.|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888886 56665543 788888888888866654 478888888888888888888888888888888888888
Q ss_pred cccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCccc-ccccccceEEEccCCccccCC
Q 039137 455 NKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRC-FEEMHGLLHIDISYNKLEGQI 533 (912)
Q Consensus 455 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~~~~ 533 (912)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+-. +. ..++...+.++...|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCGA 165 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCCC
Confidence 8888877777888888888888888888888888888888888888888888764421 11 11222244555555555
Q ss_pred CCCccCCCCchhhhccCCccc
Q 039137 534 PNSTTFRDAPLEALQGNKGLY 554 (912)
Q Consensus 534 ~~~~~~~~~~~~~l~~n~~~~ 554 (912)
|. .++......+..+.-.|
T Consensus 166 P~--~l~~~~l~~l~~~~~~C 184 (192)
T 1w8a_A 166 PS--KVRDVQIKDLPHSEFKC 184 (192)
T ss_dssp ST--TTTTSBGGGSCTTTCCC
T ss_pred Ch--HHcCCChhhCcHhhcCc
Confidence 53 23334444444443334
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=1.8e-16 Score=154.80 Aligned_cols=132 Identities=20% Similarity=0.182 Sum_probs=54.8
Q ss_pred CCCcEEeccccccc-cccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeee
Q 039137 133 SNLEYLDFSANKLF-GQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILY 211 (912)
Q Consensus 133 ~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 211 (912)
++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|++++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34444444444443 34444444444444444444444422 3334444444444444444433333333344444444
Q ss_pred eccCCCcCcc-ccccccccccceeecccccccCccc---cccccccccceeeeccccCc
Q 039137 212 LYNNSFFGSI-PQEIGNLKSLFDLELCINQLSGAIP---LSISNLTNLRFLFLYHNELS 266 (912)
Q Consensus 212 L~~n~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~p---~~~~~l~~L~~L~L~~N~l~ 266 (912)
|++|.+++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 4444443211 1333444444444444444442222 23444444444444444444
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.4e-16 Score=153.99 Aligned_cols=133 Identities=26% Similarity=0.289 Sum_probs=84.8
Q ss_pred ccccEEEccCCccc-CCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceee
Q 039137 397 IYLNRLSLSGNKLS-GCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELD 475 (912)
Q Consensus 397 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 475 (912)
++|+.|++++|+++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 34555555555555 44555556666666666666666654 5566666666666666666655666666666777777
Q ss_pred ccccccCccc-ccccccccccccccccCccccCCCc---ccccccccceEEEccCCcccc
Q 039137 476 LSHNFLGEKI-SSRICRMESLEKLNLSYNNLSGLIP---RCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 476 Ls~N~l~~~~-~~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~~ 531 (912)
|++|+|++.. +..+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 7777766542 2566667777777777777776654 466677777777777776653
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.5e-16 Score=156.28 Aligned_cols=109 Identities=28% Similarity=0.323 Sum_probs=65.9
Q ss_pred ccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCccccccccccccccccccc
Q 039137 422 NLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLS 501 (912)
Q Consensus 422 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls 501 (912)
+|++|+|++|+|+. +|..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~~-ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFTL-VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCCS-CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCch-hHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 45555555555553 33455555555555555555555555555566666666666666655555566666666666666
Q ss_pred CccccCCCcccccccccceEEEccCCcccc
Q 039137 502 YNNLSGLIPRCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 502 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 531 (912)
+|+|+++.+..|..+++|+.|++++|+|.|
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 666666555566666677777777777765
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=3.4e-16 Score=149.50 Aligned_cols=127 Identities=23% Similarity=0.288 Sum_probs=74.8
Q ss_pred ccccEEEccCCccc-CCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceee
Q 039137 397 IYLNRLSLSGNKLS-GCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELD 475 (912)
Q Consensus 397 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 475 (912)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34455555555554 44455555555555555555555554 4555566666666666666655565555666666666
Q ss_pred ccccccCcc-cccccccccccccccccCccccCCCc---ccccccccceEEEcc
Q 039137 476 LSHNFLGEK-ISSRICRMESLEKLNLSYNNLSGLIP---RCFEEMHGLLHIDIS 525 (912)
Q Consensus 476 Ls~N~l~~~-~~~~~~~l~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~l~ls 525 (912)
+++|++++. .+..+..+++|+.|++++|++++..+ ..+..+++|+.||++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666553 23556666666666666666666554 456666666666665
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.63 E-value=1.3e-15 Score=169.85 Aligned_cols=264 Identities=13% Similarity=0.100 Sum_probs=146.6
Q ss_pred cccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEec
Q 039137 229 KSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRL 308 (912)
Q Consensus 229 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 308 (912)
..++.+.+.+ .++..-..+|.++ +|+.+.+..| ++.+...+|.+. +|+.+.+.. .++.+.+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3444444433 2333334455553 5666666555 554555555553 466666654 454455555666666666666
Q ss_pred ccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCC
Q 039137 309 NQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGE 388 (912)
Q Consensus 309 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~ 388 (912)
++|.++.....+|. ..+|+.+.|..+ +......+|.+|++|+.+++..| ++.....
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~--------------------- 243 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQE--------------------- 243 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTT---------------------
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccc---------------------
Confidence 66666655555555 355666666533 44445555555555555555543 3322223
Q ss_pred CCccccccccccEEEccCCcccCCCccccccccccccccccCcccC-----ccccccccccccccEEEecccccccccch
Q 039137 389 IPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLS-----NFVPESLGSLVKLYYLNLSHNKLSQQIPI 463 (912)
Q Consensus 389 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 463 (912)
.|.+ .+|+.+.+. +.++.....+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|. |.++.+...
T Consensus 244 ---aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~ 317 (401)
T 4fdw_A 244 ---AFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQG 317 (401)
T ss_dssp ---TTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTT
T ss_pred ---cccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhh
Confidence 3333 344444442 2333333445555555555555554443 3455666666777777776 346555566
Q ss_pred hhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccc-cceEEEccCCcc
Q 039137 464 ELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMH-GLLHIDISYNKL 529 (912)
Q Consensus 464 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~-~L~~l~ls~N~l 529 (912)
.|.++.+|+.++|..| ++.+...+|.++ +|+.+++++|.+..+.+..|..++ .++.|++..|.+
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 6667777777777443 555566667777 777777777777666666676664 566776666544
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=6.4e-16 Score=152.29 Aligned_cols=132 Identities=22% Similarity=0.294 Sum_probs=79.7
Q ss_pred cEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeecccc
Q 039137 400 NRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHN 479 (912)
Q Consensus 400 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 479 (912)
+.+++++|+++ .+|..+ .++|+.|++++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 34444555444 233222 145566666666666555555566666666666666666555555566666666666666
Q ss_pred ccCcccccccccccccccccccCccccCCCcccccccccceEEEccCCccccCCC
Q 039137 480 FLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 480 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
+|++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|++.|..|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 6666555556666666666666666666655566667777777777777766544
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.5e-15 Score=149.75 Aligned_cols=134 Identities=25% Similarity=0.281 Sum_probs=89.4
Q ss_pred CccceeEecCCCCeEEEeeccccccccccccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccc
Q 039137 73 CAWSGIFCNHAERVVGINLTSISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSG 152 (912)
Q Consensus 73 C~w~gv~c~~~~~v~~l~l~~~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 152 (912)
|.|+++.|+..+ ++.+ ...-.++|++|+|++|++++..+..|+.+++|++|+|++|++++..+..
T Consensus 7 C~~~~l~~~~~~-l~~~--------------p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 71 (177)
T 2o6r_A 7 CSGTEIRCNSKG-LTSV--------------PTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGV 71 (177)
T ss_dssp EETTEEECCSSC-CSSC--------------CTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTT
T ss_pred eCCCEEEecCCC-CccC--------------CCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhH
Confidence 789999997532 1111 1112356778888888877666666777778888888888777555555
Q ss_pred cccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCcc
Q 039137 153 IGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSI 221 (912)
Q Consensus 153 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~ 221 (912)
|+.+++|++|+|++|.+++..+..++.+++|++|++++|++++..+..+.++++|++|+|++|.+.+..
T Consensus 72 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 72 FDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred ccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 677777777777777777555555677777777777777776544444566666666666666665433
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=4.2e-16 Score=148.86 Aligned_cols=127 Identities=24% Similarity=0.150 Sum_probs=74.6
Q ss_pred ccccEEEccCcccc-CCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEE
Q 039137 373 LQLQYLDLSSNYIV-GEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLN 451 (912)
Q Consensus 373 ~~L~~L~L~~N~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 451 (912)
++|++|++++|.++ +.+|..+..+++|+.|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 34555555555555 44555555555555666666555543 4455566666666666666655555555566666666
Q ss_pred ecccccccc-cchhhhcccccceeeccccccCcccc---ccccccccccccccc
Q 039137 452 LSHNKLSQQ-IPIELDNLIHLSELDLSHNFLGEKIS---SRICRMESLEKLNLS 501 (912)
Q Consensus 452 Ls~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~ls 501 (912)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 666666542 23556666666666666666655544 456666666666665
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=2.6e-15 Score=167.44 Aligned_cols=270 Identities=12% Similarity=0.069 Sum_probs=190.0
Q ss_pred ccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccchhhh
Q 039137 205 THVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLNSLLL 284 (912)
Q Consensus 205 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L 284 (912)
..++.+.+.+ .++......|.++ +|+.+.+..+ ++..-..+|.++ +|+.+.+.. .++.+.+.+|.++++|+.+++
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 3445555543 3443445677775 7999999877 765666778874 799999986 777777889999999999999
Q ss_pred ccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCccccc
Q 039137 285 AKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINNISGS 364 (912)
Q Consensus 285 ~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 364 (912)
+.|+++.+....|. .++|+.+.|.++ ++.....+|.++++|+.+++..| +......+|.+ .+|+.+.+ .+.++..
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNI 262 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEE
T ss_pred CCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEE
Confidence 99999977777787 589999999855 77788899999999999999975 66677777877 68888888 4556545
Q ss_pred ccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCcccccccccc
Q 039137 365 IPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSL 444 (912)
Q Consensus 365 ~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 444 (912)
....|.++.+|+.+++.+|.+.. +.+....+..|.++++|+.++|. +.++.+....|.++
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c 322 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGN 322 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTC
T ss_pred ChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCC
Confidence 56677777777777777766541 11112334456666666666666 34655556666666
Q ss_pred ccccEEEecccccccccchhhhcccccceeeccccccCccccccccccc-ccccccccCcccc
Q 039137 445 VKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRME-SLEKLNLSYNNLS 506 (912)
Q Consensus 445 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~ls~N~l~ 506 (912)
++|+.++|..| ++.+...+|.++ +|+.|++++|.+....+..|.+++ +++.|++..|.+.
T Consensus 323 ~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 323 RKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred CCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 66666666444 555556666666 677777776666665556666663 5666666655543
No 388
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.6e-15 Score=151.37 Aligned_cols=125 Identities=24% Similarity=0.308 Sum_probs=77.7
Q ss_pred EEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcC
Q 039137 114 LDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFL 193 (912)
Q Consensus 114 L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l 193 (912)
+++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 445555555 3454443 46777777777775 5666677777777777777777765556666666666666666666
Q ss_pred CCCCCccCCCCccceeeeeccCCCcCccccccccccccceeeccccccc
Q 039137 194 NGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLS 242 (912)
Q Consensus 194 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~ 242 (912)
++..|..|.++++|++|+|++|.+++..+..|..+++|+.|++++|.+.
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 6555556666666666666666666444444555555555555555554
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.59 E-value=1e-17 Score=168.45 Aligned_cols=136 Identities=24% Similarity=0.336 Sum_probs=85.2
Q ss_pred CCCCCccEEEccCCcccccCCc------cccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccC
Q 039137 106 SSFPHLVYLDLYNNELFGIIPP------QISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQ 179 (912)
Q Consensus 106 ~~l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 179 (912)
.....++.++++.+.++|.+|+ .|+.+++|++|+|++|++++ +| .++.+++|++|++++|.++ .+|..++.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3445556666666666666665 67777777777777777764 66 6777777777777777776 56666666
Q ss_pred cccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccc-cccccccccceeecccccccCccc
Q 039137 180 LTVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIP-QEIGNLKSLFDLELCINQLSGAIP 246 (912)
Q Consensus 180 l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p 246 (912)
+++|++|++++|++++ +| .+.++++|++|++++|.+++..+ ..+..+++|++|++++|.+++..|
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 6667777777766664 33 45555666666666666553222 345555555555555555554433
No 390
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.59 E-value=1.8e-15 Score=164.38 Aligned_cols=143 Identities=9% Similarity=0.109 Sum_probs=104.0
Q ss_pred CCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCC-------------CchH-----HHHHHHHHHHHHhhcCCCcc
Q 039137 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPG-------------EMSF-----QQEEFLNEIQALTEIRHRNI 700 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~-----~~~~~~~Ei~~l~~l~h~ni 700 (912)
=|.+.+.||+|++|.||+|..++|+.||||+++..... .... .+....+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 48999999999999999999999999999987643111 0000 01112457777777755544
Q ss_pred ccEEEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCC
Q 039137 701 VKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLG 780 (912)
Q Consensus 701 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~ 780 (912)
....-+.. ...++||||++|+++.++.. .+....++.|++.++.|||++ |||||||||.|||++++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~---------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~d 241 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS---------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREE 241 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC---------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEE
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc---------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCC
Confidence 22222211 23479999999988866541 134567889999999999999 99999999999999887
Q ss_pred C----------cEEEeccccccccC
Q 039137 781 Y----------EAHVSDFGIAKFLN 795 (912)
Q Consensus 781 ~----------~~kl~Dfgla~~~~ 795 (912)
+ .+.|+||+-+....
T Consensus 242 gd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 242 KDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp ECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCcccccccccceEEEEeCCcccCC
Confidence 6 38999999776543
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.57 E-value=7.7e-17 Score=162.10 Aligned_cols=151 Identities=21% Similarity=0.262 Sum_probs=97.6
Q ss_pred ccccEEEccCccccCCCCc------cccccccccEEEccCCcccCCCccccccccccccccccCcccCcccccccccccc
Q 039137 373 LQLQYLDLSSNYIVGEIPT------QLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVK 446 (912)
Q Consensus 373 ~~L~~L~L~~N~l~~~~~~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 446 (912)
..++.++++.|.+.+.+|. .+..+++|++|++++|++++ +| .+..+++|++|++++|.++. +|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCc
Confidence 3444445555555544444 66666667777777776664 45 66667777777777777764 4555666677
Q ss_pred ccEEEecccccccccchhhhcccccceeeccccccCcccc-cccccccccccccccCccccCCCcc----------cccc
Q 039137 447 LYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKIS-SRICRMESLEKLNLSYNNLSGLIPR----------CFEE 515 (912)
Q Consensus 447 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~p~----------~~~~ 515 (912)
|++|+|++|++++ +| .+..+++|++|++++|+|++..+ ..+..+++|+.|++++|++++.+|. .+..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 7777777777764 34 56677777777777777765433 4566777777777777777666554 2677
Q ss_pred cccceEEEccCCccc
Q 039137 516 MHGLLHIDISYNKLE 530 (912)
Q Consensus 516 l~~L~~l~ls~N~l~ 530 (912)
+++|+.|| +|+++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 77888776 55554
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=7.4e-14 Score=156.40 Aligned_cols=316 Identities=12% Similarity=0.050 Sum_probs=134.5
Q ss_pred ccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCcCCCCCCcc
Q 039137 121 LFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNFLNGSIPRS 200 (912)
Q Consensus 121 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~ 200 (912)
++.+-..+|.++++|+.+.|..+ ++..-..+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+ +...-...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 34333455666666666666533 44333445666666666666543 33223344555555554444322 11122223
Q ss_pred CCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeeeccccCcccCCcccCCccccc
Q 039137 201 LGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFLYHNELSGIIPQEIGNLKKLN 280 (912)
Q Consensus 201 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~ 280 (912)
|.++..+........ ...-...|.++++|+.+.+.++. ..+...+|.++.+|+
T Consensus 136 F~~~~~~~~~~~~~~--------------------------~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~ 188 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--------------------------TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLK 188 (394)
T ss_dssp TTTCCCSEEECCTTC--------------------------CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCC
T ss_pred eecccccccccCccc--------------------------cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCce
Confidence 333322221111111 11112344555555555554332 223344455555555
Q ss_pred hhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCcccccccCCCCCCCCEEeccCCc
Q 039137 281 SLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINN 360 (912)
Q Consensus 281 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 360 (912)
.+++..| ++.+...+|.++..|+.+.+..+... +.+.+....+|+.+.+..+ +.......+..+..|+.+.+..+.
T Consensus 189 ~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 189 SIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp BCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred EEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 5555444 33333445555555555555444322 1222223344555554322 222333444455555555554443
Q ss_pred ccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCcccccc
Q 039137 361 ISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPES 440 (912)
Q Consensus 361 l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 440 (912)
.. .....+..+..++.+....+.+. ...+....+|+.+.+.++ ++.+...+|.++.+|+.++|.++ ++.+...+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 22 23333444444444444433221 123334444444444332 33233334444444444444322 33333444
Q ss_pred ccccccccEEEecccccccccchhhhcccccceeecc
Q 039137 441 LGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLS 477 (912)
Q Consensus 441 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 477 (912)
|.++.+|+.+++..| ++.+...+|.++.+|+.+++.
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 444444444444433 333333444444444444443
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.56 E-value=9.7e-14 Score=155.42 Aligned_cols=331 Identities=11% Similarity=0.016 Sum_probs=209.4
Q ss_pred cccccCCCCCccEEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCc
Q 039137 101 LEFSFSSFPHLVYLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQL 180 (912)
Q Consensus 101 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 180 (912)
.+.+|.+..+|+.+.|.. +++.+-..+|.++++|+.++|..+ ++..-...|.++++|+.+.+..+ +...-...|.+.
T Consensus 63 g~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~ 139 (394)
T 4fs7_A 63 GYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGC 139 (394)
T ss_dssp CTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTC
T ss_pred HHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecc
Confidence 456799999999999975 477666678999999999999865 55344567899999999888765 443445666666
Q ss_pred ccccEEEccCCcCCCCCCccCCCCccceeeeeccCCCcCccccccccccccceeecccccccCccccccccccccceeee
Q 039137 181 TVLNQLALDSNFLNGSIPRSLGNLTHVVILYLYNNSFFGSIPQEIGNLKSLFDLELCINQLSGAIPLSISNLTNLRFLFL 260 (912)
Q Consensus 181 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 260 (912)
..++......... .....|.++++|+.+.+.++... .....|.++.+|+.+.+..|
T Consensus 140 ~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~--------------------- 195 (394)
T 4fs7_A 140 DFKEITIPEGVTV--IGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN--------------------- 195 (394)
T ss_dssp CCSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT---------------------
T ss_pred cccccccCccccc--cchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC---------------------
Confidence 5444443333221 22346777777777776544321 23334555555555554433
Q ss_pred ccccCcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccccccCCCCcccCCCCCccEEEccCCcCccc
Q 039137 261 YHNELSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSNNSFFGE 340 (912)
Q Consensus 261 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 340 (912)
++.+...+|.++..|+.+.+..+... +.+.+....+|+.+.+..+ ++......|..+..|+.+.+..+.. ..
T Consensus 196 ----~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i 267 (394)
T 4fs7_A 196 ----LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RI 267 (394)
T ss_dssp ----CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EE
T ss_pred ----ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-ee
Confidence 22233344444445554444433322 1122223345555555432 2333445566666666666665533 34
Q ss_pred ccccCCCCCCCCEEeccCCcccccccccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccc
Q 039137 341 ILSDWGRCPQLSLLDVSINNISGSIPLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSL 420 (912)
Q Consensus 341 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 420 (912)
....|..+..++.+....+.+. ...+..+.+|+.+.+.++ ++......|.++.+|+.+++.++ ++.+...+|.++
T Consensus 268 ~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 268 GGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp CSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred eccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 4556666777777666655432 235566777777777654 54445567788888888888654 665566788899
Q ss_pred cccccccccCcccCccccccccccccccEEEecccccccccchhhhccccccee
Q 039137 421 INLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSEL 474 (912)
Q Consensus 421 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 474 (912)
.+|+.+++..| ++.+...+|.++++|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 343 ~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 343 TSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 99999999877 77777889999999999999765 33 345677777777654
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=7.6e-15 Score=144.37 Aligned_cols=132 Identities=23% Similarity=0.257 Sum_probs=66.0
Q ss_pred ccccccEEEccCCcccCCCcccccccc-ccccccccCcccCccccccccccccccEEEecccccccccchhhhcccccce
Q 039137 395 NIIYLNRLSLSGNKLSGCIPRELGSLI-NLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSE 473 (912)
Q Consensus 395 ~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 473 (912)
+..+|+.|++++|+++. +|. +..+. +|++|++++|.++++ ..|..+++|++|+|++|+|++..+..+..+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 33444444444444442 222 22222 555555555555543 34555555555555555555443344455555555
Q ss_pred eeccccccCcccc-cccccccccccccccCccccCCCcc---cccccccceEEEccCCccc
Q 039137 474 LDLSHNFLGEKIS-SRICRMESLEKLNLSYNNLSGLIPR---CFEEMHGLLHIDISYNKLE 530 (912)
Q Consensus 474 L~Ls~N~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~p~---~~~~l~~L~~l~ls~N~l~ 530 (912)
|+|++|+|+...+ ..+..+++|+.|++++|+++...+. .+..+++|+.||+++|...
T Consensus 93 L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 5555555533221 2455555666666666665543221 3556666666666666554
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=7.5e-15 Score=144.44 Aligned_cols=132 Identities=21% Similarity=0.220 Sum_probs=78.3
Q ss_pred cccccccEEEccCccccCCCCccccccc-cccEEEccCCcccCCCccccccccccccccccCcccCcccccccccccccc
Q 039137 370 GESLQLQYLDLSSNYIVGEIPTQLGNII-YLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLY 448 (912)
Q Consensus 370 ~~~~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 448 (912)
.++.+|++|++++|+++. ++. +..+. +|+.|++++|++++. ..+..+++|++|+|++|+|+++++..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 344455555555555552 332 33333 566666666666543 4556666666666666666665444456666666
Q ss_pred EEEecccccccccch--hhhcccccceeeccccccCccccc----ccccccccccccccCccccC
Q 039137 449 YLNLSHNKLSQQIPI--ELDNLIHLSELDLSHNFLGEKISS----RICRMESLEKLNLSYNNLSG 507 (912)
Q Consensus 449 ~L~Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~ls~N~l~~ 507 (912)
+|+|++|+|+ .+|. .+..+++|+.|++++|.++.. |. .+..+++|+.||+++|.+..
T Consensus 92 ~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 92 ELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp EEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHHH
Confidence 6666666664 3443 566666777777777776533 33 36667777777777776653
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=5.5e-14 Score=137.20 Aligned_cols=109 Identities=25% Similarity=0.327 Sum_probs=69.3
Q ss_pred cccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccC
Q 039137 423 LEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSY 502 (912)
Q Consensus 423 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~ 502 (912)
.+.+++++|.++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3455666666654 333332 5566666666666665566666666666666666666666666666666667777777
Q ss_pred ccccCCCcccccccccceEEEccCCccccCCC
Q 039137 503 NNLSGLIPRCFEEMHGLLHIDISYNKLEGQIP 534 (912)
Q Consensus 503 N~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~~ 534 (912)
|+|+++.+..|..+++|+.|++++|+|+|..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77766666667777777777777777766544
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=1.7e-13 Score=133.66 Aligned_cols=105 Identities=26% Similarity=0.283 Sum_probs=52.3
Q ss_pred ccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecc
Q 039137 375 LQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSH 454 (912)
Q Consensus 375 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 454 (912)
.+.|++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|+++.+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345566666555 2443332 4455555555555544444555555555555555555544444444555555555555
Q ss_pred cccccccchhhhcccccceeeccccccC
Q 039137 455 NKLSQQIPIELDNLIHLSELDLSHNFLG 482 (912)
Q Consensus 455 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 482 (912)
|+|++..+..|..+++|++|+|++|.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 5554444444444455555555555443
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=1.4e-13 Score=134.65 Aligned_cols=107 Identities=21% Similarity=0.330 Sum_probs=58.9
Q ss_pred ccccccCcccCccccccccccccccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCc
Q 039137 424 EYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYN 503 (912)
Q Consensus 424 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N 503 (912)
+.+++++|+++. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 344555555543 233332 45555555555555555555555555555555555555554444555566666666666
Q ss_pred cccCCCcccccccccceEEEccCCccccCC
Q 039137 504 NLSGLIPRCFEEMHGLLHIDISYNKLEGQI 533 (912)
Q Consensus 504 ~l~~~~p~~~~~l~~L~~l~ls~N~l~~~~ 533 (912)
+|+++.+..|..+++|++|++++|+|.|..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 666555555666666666666666665543
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=4.2e-13 Score=131.30 Aligned_cols=103 Identities=26% Similarity=0.327 Sum_probs=73.5
Q ss_pred EEEccCCcccccCCccccCCCCCcEEeccccccccccccccccccccceeecccccccCCCCccccCcccccEEEccCCc
Q 039137 113 YLDLYNNELFGIIPPQISNLSNLEYLDFSANKLFGQIPSGIGLLTHLTVLHISRNWLSGSIPHEVGQLTVLNQLALDSNF 192 (912)
Q Consensus 113 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~n~ 192 (912)
.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|+.+++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4667777775 5666554 678888888888877667777778888888888888775444556777777777777777
Q ss_pred CCCCCCccCCCCccceeeeeccCCCc
Q 039137 193 LNGSIPRSLGNLTHVVILYLYNNSFF 218 (912)
Q Consensus 193 l~~~~p~~~~~l~~L~~L~L~~n~l~ 218 (912)
|++..+..|.++++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 77544445777777777777777765
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=6e-14 Score=154.88 Aligned_cols=169 Identities=21% Similarity=0.197 Sum_probs=80.7
Q ss_pred CCccEEEccCCcCcccccccCC-----CCCCCCEEeccCCcccccccccc-cccccccEEEccCccccCCCCcccccccc
Q 039137 325 PNLTFIDLSNNSFFGEILSDWG-----RCPQLSLLDVSINNISGSIPLEI-GESLQLQYLDLSSNYIVGEIPTQLGNIIY 398 (912)
Q Consensus 325 ~~L~~L~Ls~N~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~-~~~~~L~~L~L~~N~l~~~~~~~l~~l~~ 398 (912)
+.|+.|+|++|.++......+. ..++|+.|+|++|.++......+ ..+.+|++|+|++|.++......+..
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~--- 148 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRD--- 148 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHH---
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHH---
Confidence 4577777777777654333222 12455555555555543222221 12334445555555444322222210
Q ss_pred ccEEEccCCcccCCCcccc-ccccccccccccCcccCcc----ccccccccccccEEEecccccccc----cchhhhccc
Q 039137 399 LNRLSLSGNKLSGCIPREL-GSLINLEYLDLSANNLSNF----VPESLGSLVKLYYLNLSHNKLSQQ----IPIELDNLI 469 (912)
Q Consensus 399 L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~ 469 (912)
.+ ...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++. ++..+...+
T Consensus 149 -----------------~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~ 211 (372)
T 3un9_A 149 -----------------LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNR 211 (372)
T ss_dssp -----------------HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCS
T ss_pred -----------------HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCC
Confidence 01 1234455555555555432 122234455566666666665432 234445555
Q ss_pred ccceeeccccccCcc----cccccccccccccccccCccccCCCcccc
Q 039137 470 HLSELDLSHNFLGEK----ISSRICRMESLEKLNLSYNNLSGLIPRCF 513 (912)
Q Consensus 470 ~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~p~~~ 513 (912)
+|++|+|++|.|++. +...+...++|+.|+|++|+|++.....+
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 666666666666543 22333345666666666666665433333
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=4.8e-14 Score=155.65 Aligned_cols=171 Identities=18% Similarity=0.112 Sum_probs=106.5
Q ss_pred ccccceEecccccccCCCCcccC-----CCCCccEEEccCCcCcccccccCC-CCCCCCEEeccCCccccccccccc---
Q 039137 300 LTDLVKLRLNQNYLTGNISETFG-----TYPNLTFIDLSNNSFFGEILSDWG-RCPQLSLLDVSINNISGSIPLEIG--- 370 (912)
Q Consensus 300 l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~--- 370 (912)
+++|+.|+|++|.++......+. ..++|++|+|++|.++......+. .+++|+.|+|++|+|+......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 47899999999999864444432 237999999999999765544443 467899999999999855444442
Q ss_pred --ccccccEEEccCccccCC----CCccccccccccEEEccCCcccCCCccccccccccccccccCcccCcccccccccc
Q 039137 371 --ESLQLQYLDLSSNYIVGE----IPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSL 444 (912)
Q Consensus 371 --~~~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 444 (912)
..++|++|+|++|.|+.. ++..+...++|++|+|++|.+++.... .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 345677777777777642 222234444555555555554421100 112334445
Q ss_pred ccccEEEecccccccc----cchhhhcccccceeeccccccCcccccccc
Q 039137 445 VKLYYLNLSHNKLSQQ----IPIELDNLIHLSELDLSHNFLGEKISSRIC 490 (912)
Q Consensus 445 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 490 (912)
++|+.|+|++|.|+.. ++..+...++|++|+|++|.|++.....+.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~ 260 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLR 260 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHH
Confidence 5666666666666542 333444557777777777777655444443
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=6.5e-11 Score=132.39 Aligned_cols=130 Identities=10% Similarity=0.181 Sum_probs=62.7
Q ss_pred ccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccEEEecccccccccchhhhcccc
Q 039137 391 TQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIH 470 (912)
Q Consensus 391 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 470 (912)
..|.++..|+.+.+.++..+ ....+|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++.+...+|.++.+
T Consensus 259 ~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~ 335 (394)
T 4gt6_A 259 HAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ 335 (394)
T ss_dssp TTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC
Confidence 34445555555555444332 334455555555555553 3344444555555566666666543 44444555555666
Q ss_pred cceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCC
Q 039137 471 LSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527 (912)
Q Consensus 471 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 527 (912)
|+.+.|..+ ++.+...+|.++++|+.+++.+|.... ..|.....|+.+.+..|
T Consensus 336 L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~ 388 (394)
T 4gt6_A 336 LERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPG 388 (394)
T ss_dssp CCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC--------
T ss_pred CCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCC
Confidence 666665433 444445556666666666665554321 23444455555555444
No 403
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.26 E-value=2.9e-12 Score=140.85 Aligned_cols=104 Identities=26% Similarity=0.218 Sum_probs=67.6
Q ss_pred EEEccCc-cccCCCCccccccccccEEEccC-CcccCCCccccccccccccccccCcccCccccccccccccccEEEecc
Q 039137 377 YLDLSSN-YIVGEIPTQLGNIIYLNRLSLSG-NKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYYLNLSH 454 (912)
Q Consensus 377 ~L~L~~N-~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 454 (912)
.++++++ +++ .+|. +..+++|+.|+|++ |+|++..+..|..+++|++|+|++|+|++++|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4566666 666 3555 66666677777764 677666666666677777777777777666666666667777777777
Q ss_pred cccccccchhhhcccccceeeccccccCc
Q 039137 455 NKLSQQIPIELDNLIHLSELDLSHNFLGE 483 (912)
Q Consensus 455 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 483 (912)
|+|++..+..|..++ |+.|+|++|.|..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 776655555555444 6666666666653
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.25 E-value=9.5e-11 Score=131.03 Aligned_cols=133 Identities=11% Similarity=0.165 Sum_probs=81.5
Q ss_pred cccccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccc
Q 039137 366 PLEIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLV 445 (912)
Q Consensus 366 ~~~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 445 (912)
...|.++..|+.+.+.++... .....|.++..|+.+.+. +.++.....+|.++.+|+.++|..+ ++.+...+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345555666666666554332 344566666777777775 3444455567777778888877654 6666667788888
Q ss_pred cccEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccc
Q 039137 446 KLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNL 505 (912)
Q Consensus 446 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l 505 (912)
+|+.+.|..+ ++.+...+|.++.+|+.+++.+|... -..+....+|+.+.+..|.+
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC----------
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCE
Confidence 8888888654 66566777888888888888877542 24566677788877776654
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=8.6e-12 Score=137.05 Aligned_cols=132 Identities=22% Similarity=0.168 Sum_probs=86.2
Q ss_pred EEEccCC-cccCCCccccccccccccccccC-cccCccccccccccccccEEEecccccccccchhhhcccccceeeccc
Q 039137 401 RLSLSGN-KLSGCIPRELGSLINLEYLDLSA-NNLSNFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSH 478 (912)
Q Consensus 401 ~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 478 (912)
.++++++ +++ .+|. +..+++|++|+|++ |+|+++.+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4567776 677 4666 77777777777775 777777667777777777777777777777777777777777777777
Q ss_pred cccCcccccccccccccccccccCccccCCCc-ccccccccceEEEccCCccccCCCC
Q 039137 479 NFLGEKISSRICRMESLEKLNLSYNNLSGLIP-RCFEEMHGLLHIDISYNKLEGQIPN 535 (912)
Q Consensus 479 N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~~~~~~ 535 (912)
|+|++..+..|..++ |+.|+|++|+|...-. ..|..+.......+..+++.|..|.
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 777766666666555 7777777777765422 2222222222233344555555544
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=3.4e-11 Score=126.58 Aligned_cols=146 Identities=14% Similarity=0.093 Sum_probs=114.9
Q ss_pred HHHhcCCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCCe
Q 039137 634 ISATNDFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPKH 712 (912)
Q Consensus 634 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~ 712 (912)
......|++....+.|+.+.||++.. .++.+++|+....... ....+.+|+++++.+. +..+.++++++...+.
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~----~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~ 84 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKG----TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGW 84 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTT----STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred HHHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCC----CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCc
Confidence 34456788888899999999999976 4688999998642211 1234778999999994 7788899999998899
Q ss_pred eeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------
Q 039137 713 SFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC------------------------------- 761 (912)
Q Consensus 713 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------- 761 (912)
.|+||||++|.++.+... +..+...++.+++++++.||+..
T Consensus 85 ~~lv~e~i~G~~l~~~~~--------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (263)
T 3tm0_A 85 SNLLMSEADGVLCSEEYE--------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE 156 (263)
T ss_dssp EEEEEECCSSEEHHHHCC--------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred eEEEEEecCCeehhhccC--------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence 999999999999877641 12334578899999999999811
Q ss_pred -------------------------CCCeeecCCCCCCeEEcCCCcEEEecccccc
Q 039137 762 -------------------------FPPIVHRDISSKNVLLDLGYEAHVSDFGIAK 792 (912)
Q Consensus 762 -------------------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~ 792 (912)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876566799999775
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=3.2e-10 Score=118.94 Aligned_cols=137 Identities=15% Similarity=0.138 Sum_probs=101.4
Q ss_pred CCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc--cccEEEEEEcCCeeeEE
Q 039137 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--IVKFYGFCSHPKHSFII 716 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n--iv~l~~~~~~~~~~~lv 716 (912)
.|.+....+.|..+.||++...+|+.+++|...... ...+.+|+++++.+++.+ +.+++++...++..++|
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~-------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCT-------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCccc-------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 444433334666799999987778889999975431 134668999999986444 56689998888889999
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC----------------------------------- 761 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 761 (912)
|||++|.++. .. . . ....++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~--~~--~----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 94 LGEVPGQDLL--SS--H----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EECCSSEETT--TS--C----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEecCCcccC--cC--c----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 9999998884 21 1 1 12367788888888888752
Q ss_pred --------------------CCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 762 --------------------FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 762 --------------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
.+.++|+|++|.||++++++.+.++||+.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01299999999999998776677999998863
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=6.7e-09 Score=115.32 Aligned_cols=142 Identities=12% Similarity=0.114 Sum_probs=69.0
Q ss_pred cccccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccc
Q 039137 368 EIGESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKL 447 (912)
Q Consensus 368 ~~~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 447 (912)
.+....+|+.+.+..+ +.......+.+...|+.+.+..+ ++.....+|..+.+|+.+.+..+ +..+....|.++.+|
T Consensus 212 ~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 212 GFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTC
T ss_pred ccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccccc
Confidence 3334444555554433 22223334445555555555443 33233444555555555555332 444444455555555
Q ss_pred cEEEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCccccc
Q 039137 448 YYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFE 514 (912)
Q Consensus 448 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 514 (912)
+.+.+.++.++.+....|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+ ++.+-..+|.
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~ 353 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFE 353 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTT
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhh
Confidence 55555555555444555555555555555433 44444455555555555555433 4433334443
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.98 E-value=2.4e-10 Score=124.88 Aligned_cols=83 Identities=20% Similarity=0.375 Sum_probs=45.5
Q ss_pred ccccccccccCcccCccccccc---cccccccEEEecccccccc----cchhhhcccccceeeccccccCccccccccc-
Q 039137 420 LINLEYLDLSANNLSNFVPESL---GSLVKLYYLNLSHNKLSQQ----IPIELDNLIHLSELDLSHNFLGEKISSRICR- 491 (912)
Q Consensus 420 l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~- 491 (912)
+++|++|+|++|.+.+..+..+ ..+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|++..-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 4555555555555543222222 2356777777777776543 2333455677777777777776543333332
Q ss_pred ccccccccccCcc
Q 039137 492 MESLEKLNLSYNN 504 (912)
Q Consensus 492 l~~L~~L~ls~N~ 504 (912)
+ ...+++++|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 2456777766
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.96 E-value=9.5e-09 Score=114.11 Aligned_cols=153 Identities=10% Similarity=0.065 Sum_probs=118.9
Q ss_pred cccccccEEEccCccccCCCCccccccccccEEEccCCcccCCCccccccccccccccccCcccCccccccccccccccE
Q 039137 370 GESLQLQYLDLSSNYIVGEIPTQLGNIIYLNRLSLSGNKLSGCIPRELGSLINLEYLDLSANNLSNFVPESLGSLVKLYY 449 (912)
Q Consensus 370 ~~~~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 449 (912)
.....+..+.+....-. .....+.....|+.+.+..+ +.......+..+..|+.+.+..+ ++.+....|.++.+|+.
T Consensus 191 ~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~ 267 (379)
T 4h09_A 191 PAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKT 267 (379)
T ss_dssp CTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCE
T ss_pred cccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcc
Confidence 34445555555443322 34456667778888888765 44355677888899999999776 77777788999999999
Q ss_pred EEecccccccccchhhhcccccceeeccccccCcccccccccccccccccccCccccCCCcccccccccceEEEccCC
Q 039137 450 LNLSHNKLSQQIPIELDNLIHLSELDLSHNFLGEKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYN 527 (912)
Q Consensus 450 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N 527 (912)
+.+..+ ++.+....|.++.+|+.+++.++.++.+....|.++.+|+.++|..+ ++.+...+|.++.+|+.+.+..+
T Consensus 268 i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 268 LNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred cccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 999765 65566778999999999999999998888899999999999999755 77777889999999999988654
No 411
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=3.2e-09 Score=116.93 Aligned_cols=144 Identities=14% Similarity=0.238 Sum_probs=108.2
Q ss_pred CCceeeecCceEEEEEEeCCCCEEEEEEcc--CCCCCCchHHHHHHHHHHHHHhhcC--CCccccEEEEEEcC---Ceee
Q 039137 642 AEHCIGKGGHGSVYRAKVPSGEIFAVKKFH--SPLPGEMSFQQEEFLNEIQALTEIR--HRNIVKFYGFCSHP---KHSF 714 (912)
Q Consensus 642 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~~Ei~~l~~l~--h~niv~l~~~~~~~---~~~~ 714 (912)
..+.++.|.++.||+++.. +..+++|+.. ..... .....+.+|+.+++.+. +..+++++.++.+. +..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~---~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLL---PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC-------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCC---CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeE
Confidence 4578999999999999875 4678888875 22111 12346778999999996 45688999998776 4589
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---------------------------------
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC--------------------------------- 761 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------- 761 (912)
+||||++|..+.+.. ...++..+...++.+++++|+.||+..
T Consensus 118 ~vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETE 192 (359)
T ss_dssp EEEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCS
T ss_pred EEEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCc
Confidence 999999998774421 124678888999999999999999831
Q ss_pred ----------------------CCCeeecCCCCCCeEEcCCCc--EEEecccccccc
Q 039137 762 ----------------------FPPIVHRDISSKNVLLDLGYE--AHVSDFGIAKFL 794 (912)
Q Consensus 762 ----------------------~~~ivH~Dlk~~Nill~~~~~--~kl~Dfgla~~~ 794 (912)
.+.++|||+++.||+++.++. +.++||+.+...
T Consensus 193 ~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 193 SIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 137999999999999997753 689999988753
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.93 E-value=7.5e-12 Score=129.57 Aligned_cols=146 Identities=17% Similarity=0.117 Sum_probs=68.0
Q ss_pred CCCccceeEecCCC-CeEEEeecc---ccccccccccccCCCCCccEEEccCCcccccCCc-cccCCCCCcE--Eecccc
Q 039137 71 SPCAWSGIFCNHAE-RVVGINLTS---ISLNGTLLEFSFSSFPHLVYLDLYNNELFGIIPP-QISNLSNLEY--LDFSAN 143 (912)
Q Consensus 71 ~~C~w~gv~c~~~~-~v~~l~l~~---~~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~--L~Ls~n 143 (912)
..|+|.|+.|+..+ +|+.+...+ ..+.|.+.+..+..++. .|...+|.-++.++- .|...+.|+. ++++.|
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N 153 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLN 153 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTT
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCC
Confidence 46899999998654 554333322 23334443322222211 111222222222211 1333334444 555666
Q ss_pred ccc---cccccccccccccceeecccccccC--CCCccccCcccccEEEccCCcCCCCCCccCCCCc--cceeeeeccCC
Q 039137 144 KLF---GQIPSGIGLLTHLTVLHISRNWLSG--SIPHEVGQLTVLNQLALDSNFLNGSIPRSLGNLT--HVVILYLYNNS 216 (912)
Q Consensus 144 ~l~---~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~L~L~~n~ 216 (912)
+.. +.++-....+++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..++ +|++|+|++|.
T Consensus 154 ~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Np 231 (267)
T 3rw6_A 154 RRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNS 231 (267)
T ss_dssp SHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTST
T ss_pred HHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCc
Confidence 332 2222222345667777777776665 3345555666666666666666533 2222222 45555555555
Q ss_pred CcCc
Q 039137 217 FFGS 220 (912)
Q Consensus 217 l~~~ 220 (912)
+.+.
T Consensus 232 l~~~ 235 (267)
T 3rw6_A 232 LCDT 235 (267)
T ss_dssp TGGG
T ss_pred Cccc
Confidence 5443
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.91 E-value=3e-10 Score=124.12 Aligned_cols=83 Identities=23% Similarity=0.289 Sum_probs=53.1
Q ss_pred cccccEEEccCCcccCCCccccc---cccccccccccCcccCccc----cccccccccccEEEecccccccccchhhhc-
Q 039137 396 IIYLNRLSLSGNKLSGCIPRELG---SLINLEYLDLSANNLSNFV----PESLGSLVKLYYLNLSHNKLSQQIPIELDN- 467 (912)
Q Consensus 396 l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~- 467 (912)
+++|+.|+|.+|.+.+..+..+. .+++|++|+|+.|.+.+.. +..+..+++|+.|+|++|.|+...-..+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 45666666666666543332222 4677888888888877632 334456788888888888887544444443
Q ss_pred ccccceeeccccc
Q 039137 468 LIHLSELDLSHNF 480 (912)
Q Consensus 468 l~~L~~L~Ls~N~ 480 (912)
+ ...++++.|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 3668888887
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.83 E-value=2.5e-09 Score=114.78 Aligned_cols=183 Identities=21% Similarity=0.234 Sum_probs=124.5
Q ss_pred CceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCc--cccEEEEEEcCC---eeeEE
Q 039137 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRN--IVKFYGFCSHPK---HSFII 716 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv 716 (912)
.+.++.|....||++. ..+++|+.... .....+.+|++.++.+. +.. +.+++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4679999999999863 56889985421 24567889999999883 433 455555543333 35899
Q ss_pred EeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------
Q 039137 717 YEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC----------------------------------- 761 (912)
Q Consensus 717 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 761 (912)
||+++|.++.+... ..++.+++..++.++++.++.||+..
T Consensus 95 m~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
T 3sg8_A 95 FTKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQ 169 (304)
T ss_dssp EECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHH
T ss_pred EcccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCccc
Confidence 99999988865331 34677788889999999999998621
Q ss_pred --------------------CCCeeecCCCCCCeEEcC--CCcEEEeccccccccCCCCCCcccccccccc---cccccc
Q 039137 762 --------------------FPPIVHRDISSKNVLLDL--GYEAHVSDFGIAKFLNPDSSNWSELAGTHGY---VAPELA 816 (912)
Q Consensus 762 --------------------~~~ivH~Dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y---~aPE~~ 816 (912)
.+.++|+|++|.||++++ +..+.++||+.+....+.. .. .....+ ..|+..
T Consensus 170 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~-Dl---~~~~~~~~~~~~~~~ 245 (304)
T 3sg8_A 170 MKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDN-DF---ISLMEDDEEYGMEFV 245 (304)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTH-HH---HTTCCTTTSCCHHHH
T ss_pred HHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHH-HH---HHHHhhccccCHHHH
Confidence 135899999999999998 4567899999987643311 00 000001 122211
Q ss_pred c----cC----------CCCcchhHHHHHHHHHHHHhCCCCc
Q 039137 817 Y----TL----------KVTEKCDVYSFGVLALEVIKGKHPR 844 (912)
Q Consensus 817 ~----~~----------~~~~~sDvwslG~vl~elltg~~pf 844 (912)
. .. +.....+.|++|.++|++.+|+.+|
T Consensus 246 ~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 246 SKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 00 0122368999999999999999885
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.57 E-value=5.2e-07 Score=97.33 Aligned_cols=138 Identities=18% Similarity=0.180 Sum_probs=105.0
Q ss_pred CCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCC----CccccEEEEEEcCCeee
Q 039137 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH----RNIVKFYGFCSHPKHSF 714 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h----~niv~l~~~~~~~~~~~ 714 (912)
++...+.++.|....||++ ++.+++|+... ......+.+|.++++.+.+ ..+.+++++ +..+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~------~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR------DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc------HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 6677789999999999998 67788997632 1124568899999999865 234566655 5779
Q ss_pred EEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCC--------------------------------
Q 039137 715 IIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF-------------------------------- 762 (912)
Q Consensus 715 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------- 762 (912)
+||||++|.++.+.. ...++..+...++.++++.++.||+...
T Consensus 104 lvme~i~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (320)
T 3r70_A 104 NIMKYIKGERITYEQ-----YHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKE 178 (320)
T ss_dssp EEEECCCCBCCCHHH-----HTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeecCCccccccc-----cccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhc
Confidence 999999998886432 1235667778888888888888886432
Q ss_pred ----------------------------CCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 763 ----------------------------PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 763 ----------------------------~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
+.++|+|++|.||+++.+..+.++||+.+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 179 QLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp TCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 235999999999999986667999999987543
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.47 E-value=3.8e-08 Score=101.77 Aligned_cols=105 Identities=28% Similarity=0.276 Sum_probs=58.5
Q ss_pred ccccccccc--ccccCcccCc---cccccccccccccEEEeccccccc--ccchhhhcccccceeeccccccCccccccc
Q 039137 417 LGSLINLEY--LDLSANNLSN---FVPESLGSLVKLYYLNLSHNKLSQ--QIPIELDNLIHLSELDLSHNFLGEKISSRI 489 (912)
Q Consensus 417 ~~~l~~L~~--L~Ls~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 489 (912)
+...+.|.. ++++.|+... ..+....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 333444544 5556664322 111122345667777777777765 3345566677777777777777654 223
Q ss_pred cccc--ccccccccCccccCCCc-------ccccccccceEEE
Q 039137 490 CRME--SLEKLNLSYNNLSGLIP-------RCFEEMHGLLHID 523 (912)
Q Consensus 490 ~~l~--~L~~L~ls~N~l~~~~p-------~~~~~l~~L~~l~ 523 (912)
..+. +|+.|+|++|++++..| ..+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 3333 66677777777665443 2355666666664
No 417
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.40 E-value=1.6e-06 Score=91.05 Aligned_cols=136 Identities=17% Similarity=0.189 Sum_probs=101.8
Q ss_pred ceeeecCce-EEEEEEeC-CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCCeeeEEEeec
Q 039137 644 HCIGKGGHG-SVYRAKVP-SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPKHSFIIYEYL 720 (912)
Q Consensus 644 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 720 (912)
+.+..|..+ .||+.... ++..+++|+-... ....+.+|...++.+. +--|.++++++.+++..++|||++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l 102 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS-------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAI 102 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH-------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC-------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEee
Confidence 345666665 68988765 4667899985421 3566889999999884 444788999999999999999999
Q ss_pred CCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCC--------------------------------------
Q 039137 721 ESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCF-------------------------------------- 762 (912)
Q Consensus 721 ~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-------------------------------------- 762 (912)
+|.++.+.... ...+...++.+++..++.||+...
T Consensus 103 ~G~~~~~~~~~-------~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (272)
T 4gkh_A 103 PGKTAFQVLEE-------YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWP 175 (272)
T ss_dssp CSEEHHHHHHH-------CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCC
T ss_pred CCccccccccC-------CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchH
Confidence 99888776522 123445677777888888876420
Q ss_pred -----------------CCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 763 -----------------PPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 763 -----------------~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 176 ~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 176 VEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1379999999999999877777999998864
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=4.1e-08 Score=96.64 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=9.5
Q ss_pred ccccccccEEEccCc-ccc
Q 039137 369 IGESLQLQYLDLSSN-YIV 386 (912)
Q Consensus 369 ~~~~~~L~~L~L~~N-~l~ 386 (912)
+...++|++|+|++| .+.
T Consensus 32 l~~~~~L~~L~L~~n~~i~ 50 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIP 50 (185)
T ss_dssp HTTCTTCCEEECTTCTTCC
T ss_pred HhcCCCCCEEEecCCCCCC
Confidence 344455555555555 554
No 419
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.37 E-value=7e-08 Score=94.99 Aligned_cols=43 Identities=9% Similarity=0.032 Sum_probs=23.4
Q ss_pred cCCCCCCCCEEeccCC-ccccc----ccccccccccccEEEccCcccc
Q 039137 344 DWGRCPQLSLLDVSIN-NISGS----IPLEIGESLQLQYLDLSSNYIV 386 (912)
Q Consensus 344 ~~~~l~~L~~L~Ls~N-~l~~~----~~~~~~~~~~L~~L~L~~N~l~ 386 (912)
.+...+.|++|+|++| .|... +...+...++|++|+|++|+|.
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 4455677777777777 66532 2223333445555555555554
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.31 E-value=4.1e-06 Score=88.43 Aligned_cols=77 Identities=17% Similarity=0.227 Sum_probs=60.6
Q ss_pred CCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCC---ccccEEEEEEcCCeeeEEE
Q 039137 641 NAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR---NIVKFYGFCSHPKHSFIIY 717 (912)
Q Consensus 641 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~~~~~~~~~~~lv~ 717 (912)
...+.|+.|.++.||+++..+|+.+++|+....... ....+.+|++.++.+++. .+++++++. ..++||
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~----~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvm 89 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAM 89 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcc----hhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEE
Confidence 345789999999999999888999999996432111 235678999999999765 578888764 478999
Q ss_pred eecCCCCh
Q 039137 718 EYLESGSL 725 (912)
Q Consensus 718 e~~~~g~L 725 (912)
||++++++
T Consensus 90 e~l~g~~~ 97 (288)
T 3d1u_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EecccCCC
Confidence 99999875
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.29 E-value=6.9e-06 Score=87.79 Aligned_cols=137 Identities=19% Similarity=0.171 Sum_probs=97.7
Q ss_pred CceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCC---ccccEEEEEE-cCCeeeEEEe
Q 039137 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR---NIVKFYGFCS-HPKHSFIIYE 718 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e 718 (912)
.+.++.|....||+. ++.+++|+... ......+.+|+++++.+.+. .|.+++.++. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 467889999999988 56788888421 12456788999999999642 3677777775 4566789999
Q ss_pred ecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC-------------------------------------
Q 039137 719 YLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNC------------------------------------- 761 (912)
Q Consensus 719 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------- 761 (912)
|++|.++.+... ..++..+...++.++++.++.||+..
T Consensus 94 ~i~G~~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~ 168 (306)
T 3tdw_A 94 KVQGQILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESL 168 (306)
T ss_dssp CCCSEECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHH
T ss_pred ccCCeECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhh
Confidence 999988866321 12344555556666666666665431
Q ss_pred --------------------CCCeeecCCCCCCeEEcC---CCc-EEEecccccccc
Q 039137 762 --------------------FPPIVHRDISSKNVLLDL---GYE-AHVSDFGIAKFL 794 (912)
Q Consensus 762 --------------------~~~ivH~Dlk~~Nill~~---~~~-~kl~Dfgla~~~ 794 (912)
.+.++|+|+++.||+++. ++. +.|+||+.+...
T Consensus 169 ~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 169 RDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 235699999999999997 455 489999988753
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.20 E-value=9.5e-06 Score=88.79 Aligned_cols=147 Identities=15% Similarity=0.250 Sum_probs=93.4
Q ss_pred CCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCC--ccccEEEEEEcC-CeeeE
Q 039137 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR--NIVKFYGFCSHP-KHSFI 715 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~--niv~l~~~~~~~-~~~~l 715 (912)
.....+.++.|....+|+.+. +++.+++|..... ..+.+|+..++.+... .+.++++++... +..|+
T Consensus 42 ~~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~l 111 (362)
T 3ovc_A 42 SVSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYC 111 (362)
T ss_dssp CCEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEE
T ss_pred CCceEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEE
Confidence 344467789999999999876 6788999987421 2477899999998643 367788887765 67899
Q ss_pred EEeecCCCChhhH---------------h---hccCCc-----cc---------CCHHHH--------------------
Q 039137 716 IYEYLESGSLDKI---------------L---CNDASA-----KE---------LGWTQR-------------------- 743 (912)
Q Consensus 716 v~e~~~~g~L~~~---------------l---~~~~~~-----~~---------l~~~~~-------------------- 743 (912)
||||++|.++.+. + +..... .. -+|.+.
T Consensus 112 v~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 112 ISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp EEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred EEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998665321 0 111000 00 001000
Q ss_pred -HHHHHHHHHHHHHHHhCC-CCCeeecCCCCCCeEEcCCCcEEEeccccccccC
Q 039137 744 -LNVIKGVADALFYLHNNC-FPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLN 795 (912)
Q Consensus 744 -~~i~~~i~~~L~~LH~~~-~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~ 795 (912)
......+....+++.... .+.++|+|+++.||++++++.+.|+||+.+....
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 011111222222332211 1468999999999999887778899999987643
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.99 E-value=1.1e-05 Score=88.30 Aligned_cols=84 Identities=7% Similarity=0.066 Sum_probs=56.5
Q ss_pred Ccee-eecCceEEEEEEeC-------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-C--CccccEEEEEEcC-
Q 039137 643 EHCI-GKGGHGSVYRAKVP-------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-H--RNIVKFYGFCSHP- 710 (912)
Q Consensus 643 ~~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~- 710 (912)
.+.| +.|....+|+.... +++.+++|+......... .....+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~-~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~ 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPV-FPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCS-SSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCcccc-CchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC
Confidence 3567 88999999998764 267889998643210000 00134567888888884 3 3577888887655
Q ss_pred --CeeeEEEeecCCCChhh
Q 039137 711 --KHSFIIYEYLESGSLDK 727 (912)
Q Consensus 711 --~~~~lv~e~~~~g~L~~ 727 (912)
+..++||||++|.++.+
T Consensus 104 ~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TTSSCEEEEECCCCBCCCB
T ss_pred ccCCceEEEEecCCCChhh
Confidence 45789999999877653
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=6.4e-05 Score=83.56 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=50.5
Q ss_pred CceeeecCceEEEEEEeC-CCCEEEEEEccCCCC--C-CchHHHHHHHHHHHHHhhcCC--C-ccccEEEEEEcCCeeeE
Q 039137 643 EHCIGKGGHGSVYRAKVP-SGEIFAVKKFHSPLP--G-EMSFQQEEFLNEIQALTEIRH--R-NIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~-~~~~~~~~~~~Ei~~l~~l~h--~-niv~l~~~~~~~~~~~l 715 (912)
.+.+|.|..+.||+++.. +++.|++|....... . ......+++..|.+.++.+.. + .+.+++.+ +++..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999764 568899998653221 0 000123456778999888742 3 34456644 3456789
Q ss_pred EEeecCCC
Q 039137 716 IYEYLESG 723 (912)
Q Consensus 716 v~e~~~~g 723 (912)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.77 E-value=9.4e-06 Score=77.64 Aligned_cols=83 Identities=13% Similarity=0.118 Sum_probs=39.7
Q ss_pred ccccccccCcccCccccccccccccccEEEecccc-cccccchhhhcc----cccceeeccccc-cCccccccccccccc
Q 039137 422 NLEYLDLSANNLSNFVPESLGSLVKLYYLNLSHNK-LSQQIPIELDNL----IHLSELDLSHNF-LGEKISSRICRMESL 495 (912)
Q Consensus 422 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~~~~~~~l~~L 495 (912)
.|+.||++++.++...-..+..+++|++|+|++|. |++.--..+..+ ++|++|+|++|. |++.--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34555555555444333444455555555555553 443333333332 245555555543 544433344455555
Q ss_pred ccccccCcc
Q 039137 496 EKLNLSYNN 504 (912)
Q Consensus 496 ~~L~ls~N~ 504 (912)
+.|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 555555543
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.76 E-value=9.4e-05 Score=80.32 Aligned_cols=141 Identities=20% Similarity=0.302 Sum_probs=80.3
Q ss_pred ceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCC--CccccEEE------EEEcCCeeeE
Q 039137 644 HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRH--RNIVKFYG------FCSHPKHSFI 715 (912)
Q Consensus 644 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h--~niv~l~~------~~~~~~~~~l 715 (912)
+.|+.|..+.||++...+| .+++|+.... .+++..|+.+++.+.. -.+++++. +....+..++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~--------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~ 108 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP--------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFV 108 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC--------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC--------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEE
Confidence 4566678899999987554 5899998641 1233455666665531 12333332 1234667899
Q ss_pred EEeecCCCChh-----h------H---hhccCC----c-------ccCCHHH----------------------------
Q 039137 716 IYEYLESGSLD-----K------I---LCNDAS----A-------KELGWTQ---------------------------- 742 (912)
Q Consensus 716 v~e~~~~g~L~-----~------~---l~~~~~----~-------~~l~~~~---------------------------- 742 (912)
+|||++|.++. . . ++.... . ..-.|..
T Consensus 109 l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 188 (346)
T 2q83_A 109 VYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLY 188 (346)
T ss_dssp EEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHH
T ss_pred EEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHH
Confidence 99999986542 0 1 111100 0 0011211
Q ss_pred ---HHHHHHHHHHHHHHHHh----------CCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 743 ---RLNVIKGVADALFYLHN----------NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 743 ---~~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
...+..++..++++|++ ...+.++|+|+++.||+++.++.+.++||+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 189 LQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11112234446666663 0124899999999999998888999999998753
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.73 E-value=0.00018 Score=76.51 Aligned_cols=139 Identities=17% Similarity=0.186 Sum_probs=93.1
Q ss_pred CCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC---CCccccEEEEEEcCCeeeEEEe
Q 039137 642 AEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR---HRNIVKFYGFCSHPKHSFIIYE 718 (912)
Q Consensus 642 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~---h~niv~l~~~~~~~~~~~lv~e 718 (912)
-.+.|+.|....+|+... ++..+++|+.... ....+.+|.+.++.+. ...+++++.+....+..++|||
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme 111 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS-------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLE 111 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG-------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEE
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc-------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEE
Confidence 346799999999999986 5678899986421 3566889999999984 3678899999988889999999
Q ss_pred ecCCCChhh-----------HhhccCCcc-------------------cCCHHHHH---HHH----------------HH
Q 039137 719 YLESGSLDK-----------ILCNDASAK-------------------ELGWTQRL---NVI----------------KG 749 (912)
Q Consensus 719 ~~~~g~L~~-----------~l~~~~~~~-------------------~l~~~~~~---~i~----------------~~ 749 (912)
|+++..+.. -++...... .-+|.+.. ++. ..
T Consensus 112 ~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~ 191 (312)
T 3jr1_A 112 ALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDL 191 (312)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHH
T ss_pred eccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHH
Confidence 999976521 112211100 01343321 111 11
Q ss_pred HHHH-HHHHHh-CCCCCeeecCCCCCCeEEcCCCcEEEeccc
Q 039137 750 VADA-LFYLHN-NCFPPIVHRDISSKNVLLDLGYEAHVSDFG 789 (912)
Q Consensus 750 i~~~-L~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 789 (912)
++.. .+.|.. ...+.++|+|+.+.|++++.++ +.+.|+.
T Consensus 192 l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 192 IVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 223432 2235899999999999999887 8899974
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.67 E-value=2.2e-05 Score=75.07 Aligned_cols=82 Identities=11% Similarity=0.058 Sum_probs=45.3
Q ss_pred CccEEEccCCcCcccccccCCCCCCCCEEeccCCc-cccccccccccc----ccccEEEccCcc-ccCCCCccccccccc
Q 039137 326 NLTFIDLSNNSFFGEILSDWGRCPQLSLLDVSINN-ISGSIPLEIGES----LQLQYLDLSSNY-IVGEIPTQLGNIIYL 399 (912)
Q Consensus 326 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~----~~L~~L~L~~N~-l~~~~~~~l~~l~~L 399 (912)
.|+.|||+++.++......+..+++|++|+|++|. |+..--..++.+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 56667777666666555556666666666666664 443322333332 246666666653 544333344455555
Q ss_pred cEEEccCC
Q 039137 400 NRLSLSGN 407 (912)
Q Consensus 400 ~~L~L~~N 407 (912)
++|+++++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555554
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.49 E-value=0.00055 Score=72.20 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=57.6
Q ss_pred CCCCCceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-C--CccccEEEEEEcCCeeeE
Q 039137 639 DFNAEHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-H--RNIVKFYGFCSHPKHSFI 715 (912)
Q Consensus 639 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h--~niv~l~~~~~~~~~~~l 715 (912)
+..-.+.+|.|..+.||+.+..+|+.|++|+....... ....|.+|+..|+.+. . --+++++++. ..++
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~----~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~l 87 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA----LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTL 87 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC----CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc----hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceE
Confidence 45556889999999999999999999999986543222 2345678999999884 2 2355566542 3578
Q ss_pred EEeecCCCCh
Q 039137 716 IYEYLESGSL 725 (912)
Q Consensus 716 v~e~~~~g~L 725 (912)
||||++++..
T Consensus 88 v~e~l~~~~~ 97 (288)
T 3f7w_A 88 AMEWVDERPP 97 (288)
T ss_dssp EEECCCCCCC
T ss_pred EEEeecccCC
Confidence 9999987654
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.44 E-value=0.00089 Score=74.81 Aligned_cols=76 Identities=12% Similarity=0.085 Sum_probs=47.1
Q ss_pred CCeeecCCCCCCeEEcCCCcEEEeccccccccCCCCCCcccccc--ccccccccccccC---CCCcchhHHHHHHHHHHH
Q 039137 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWSELAG--THGYVAPELAYTL---KVTEKCDVYSFGVLALEV 837 (912)
Q Consensus 763 ~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g--~~~y~aPE~~~~~---~~~~~sDvwslG~vl~el 837 (912)
+.++|||+++.||+++.++ ++++||+.+....+.. ....... ...|.+|+..... ......++......+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~-Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGF-DIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHH-HHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHH-HHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 3899999999999999876 9999999987543211 1111111 1345666654311 112234556777777777
Q ss_pred HhC
Q 039137 838 IKG 840 (912)
Q Consensus 838 ltg 840 (912)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.25 E-value=9.8e-05 Score=71.98 Aligned_cols=89 Identities=13% Similarity=0.149 Sum_probs=39.8
Q ss_pred ccccccccEEEccCCcccCC----CccccccccccccccccCcccCcccc----ccccccccccEEEeccc---cccc--
Q 039137 393 LGNIIYLNRLSLSGNKLSGC----IPRELGSLINLEYLDLSANNLSNFVP----ESLGSLVKLYYLNLSHN---KLSQ-- 459 (912)
Q Consensus 393 l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N---~l~~-- 459 (912)
+...+.|+.|+|++|+|.+. +.+.+...+.|++|+|++|.|..... +.+..-+.|++|+|++| .+..
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g 145 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQV 145 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHH
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHH
Confidence 33344555555555555422 22233344555555555555543211 22333345556666543 2221
Q ss_pred --ccchhhhcccccceeecccccc
Q 039137 460 --QIPIELDNLIHLSELDLSHNFL 481 (912)
Q Consensus 460 --~~~~~~~~l~~L~~L~Ls~N~l 481 (912)
.+...+..-+.|+.|+++.|.+
T Consensus 146 ~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 146 EMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHHHhCCCcCeEeccCCCc
Confidence 1223344445555555555544
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.23 E-value=7.2e-05 Score=72.94 Aligned_cols=85 Identities=13% Similarity=0.130 Sum_probs=43.6
Q ss_pred ccccccEEEccCC-cccCC----CccccccccccccccccCcccCcccccc----ccccccccEEEecccccccc----c
Q 039137 395 NIIYLNRLSLSGN-KLSGC----IPRELGSLINLEYLDLSANNLSNFVPES----LGSLVKLYYLNLSHNKLSQQ----I 461 (912)
Q Consensus 395 ~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~----~ 461 (912)
+-+.|+.|+|++| +|... +.+.+...+.|+.|+|++|+|....... +..-+.|++|+|++|.|+.. +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3445566666553 44421 2334455566777777777776433222 23345666666666666532 2
Q ss_pred chhhhcccccceeecccc
Q 039137 462 PIELDNLIHLSELDLSHN 479 (912)
Q Consensus 462 ~~~~~~l~~L~~L~Ls~N 479 (912)
-..+..-+.|++|+|++|
T Consensus 119 a~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCceeEEECCCC
Confidence 223333345555655543
No 433
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.20 E-value=0.0021 Score=68.21 Aligned_cols=71 Identities=14% Similarity=0.099 Sum_probs=46.0
Q ss_pred CceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCcc-ccEEEEEEcCCeeeEEEeec-
Q 039137 643 EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNI-VKFYGFCSHPKHSFIIYEYL- 720 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~- 720 (912)
.+.|+.|....+|+. +.+++|+........ ....+|+..++.+...++ .+++++ .++..++++||+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-----CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-----eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecC
Confidence 688999999999998 568889876432111 112368888887743233 456554 344568999999
Q ss_pred CCCCh
Q 039137 721 ESGSL 725 (912)
Q Consensus 721 ~~g~L 725 (912)
++.++
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 66444
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.11 E-value=0.0028 Score=68.26 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=75.0
Q ss_pred ceeeecCceE-EEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-C-CccccEEEEEEcCCeeeEEEeec
Q 039137 644 HCIGKGGHGS-VYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-H-RNIVKFYGFCSHPKHSFIIYEYL 720 (912)
Q Consensus 644 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~ 720 (912)
+.|+.|.... +|+....+++.+++|....... +.+..|+.+++.+. + -.+.+++.+.... .+++||++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-------GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDL 94 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-------CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-------ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeC
Confidence 4566665554 6777654477788876543211 12345777777774 2 2356677764332 37899999
Q ss_pred CCCChhhHhhccC---------------------C--cccCCHHHHH-------HH-------------HHHHHHHHHHH
Q 039137 721 ESGSLDKILCNDA---------------------S--AKELGWTQRL-------NV-------------IKGVADALFYL 757 (912)
Q Consensus 721 ~~g~L~~~l~~~~---------------------~--~~~l~~~~~~-------~i-------------~~~i~~~L~~L 757 (912)
++..+.+++.... . ...++..... .+ ...+...++.+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 8766654432110 0 0111111100 00 01111222222
Q ss_pred H---hCCCCCeeecCCCCCCeEEcCC----CcEEEeccccccccC
Q 039137 758 H---NNCFPPIVHRDISSKNVLLDLG----YEAHVSDFGIAKFLN 795 (912)
Q Consensus 758 H---~~~~~~ivH~Dlk~~Nill~~~----~~~kl~Dfgla~~~~ 795 (912)
. ....+.++|||+.+.||+++.+ +.+.++||+.+....
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 1 1123479999999999999875 679999999887543
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.07 E-value=0.0018 Score=69.45 Aligned_cols=159 Identities=13% Similarity=0.145 Sum_probs=88.4
Q ss_pred ccHHHHHHHhcCCCCC-----ceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc--c
Q 039137 628 IVYEEIISATNDFNAE-----HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN--I 700 (912)
Q Consensus 628 ~~~~e~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n--i 700 (912)
+..+++.....+|.+. +.|+.|....+|+....+| .+++|...... ..+.+..|+.+++.+...+ +
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~------~~~~l~~e~~~l~~L~~~g~~v 79 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV------EKNDLPFFLGLMQHLAAKGLSC 79 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC---------CCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC------CHHHHHHHHHHHHHHHHCCCCC
Confidence 4455666666667652 3466788899999987555 68899876421 1233456777777774212 3
Q ss_pred ccEEEE------EEcCCeeeEEEeecCCCChhh-----------H---hhccC-C---c-----ccCCHHHHHH------
Q 039137 701 VKFYGF------CSHPKHSFIIYEYLESGSLDK-----------I---LCNDA-S---A-----KELGWTQRLN------ 745 (912)
Q Consensus 701 v~l~~~------~~~~~~~~lv~e~~~~g~L~~-----------~---l~~~~-~---~-----~~l~~~~~~~------ 745 (912)
.+++.. ....+..+++|+|++|..+.. . ++... . . ....|.....
T Consensus 80 P~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~ 159 (322)
T 2ppq_A 80 PLPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERA 159 (322)
T ss_dssp CCBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGG
T ss_pred CcccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHH
Confidence 333321 123456789999999865421 0 11110 0 0 0001211100
Q ss_pred ------HHHHHHHHHHHHHhC----CCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 746 ------VIKGVADALFYLHNN----CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 746 ------i~~~i~~~L~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
+...+...++++++. ..+.++|+|+++.||+++.++.+.++||+.+..
T Consensus 160 ~~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 160 DEVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GGTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 001234455555532 124799999999999999876668999997753
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.94 E-value=0.0084 Score=64.22 Aligned_cols=159 Identities=13% Similarity=0.176 Sum_probs=88.9
Q ss_pred ccHHHHHHHhcCCCC-----CceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCC--cc
Q 039137 628 IVYEEIISATNDFNA-----EHCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHR--NI 700 (912)
Q Consensus 628 ~~~~e~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~--ni 700 (912)
...+++......|.+ ...++ |....||+....+|+.+++|....... ..+.+..|..+++.+... .+
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----~~~~~~~E~~~~~~L~~~g~~v 84 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-----TADQILEEHQFALQLVNDEVPV 84 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-----CHHHHHHHHHHHHHHHHTTCSB
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-----CHHHHHHHHHHHHHHHHcCCee
Confidence 344444444444432 24566 888899998877787899999863311 234566788888887422 24
Q ss_pred ccEEEE-----EEcCCeeeEEEeecCCCChh-----hH---------hhccC------CcccCCHHHH----HH------
Q 039137 701 VKFYGF-----CSHPKHSFIIYEYLESGSLD-----KI---------LCNDA------SAKELGWTQR----LN------ 745 (912)
Q Consensus 701 v~l~~~-----~~~~~~~~lv~e~~~~g~L~-----~~---------l~~~~------~~~~l~~~~~----~~------ 745 (912)
++++.. ....+..+++|||++|..+. .+ ++... .....++... ..
T Consensus 85 p~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (328)
T 1zyl_A 85 AAPVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDAT 164 (328)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCS
T ss_pred cceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcC
Confidence 444432 12245668899999885432 11 11100 0011121111 00
Q ss_pred ---------HHHHHHHHHHHHHhC----CCCCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 746 ---------VIKGVADALFYLHNN----CFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 746 ---------i~~~i~~~L~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
+...+...++.+.+. ..+.++|+|+++.||+++ + .+.++||+.+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~g 224 (328)
T 1zyl_A 165 LIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARNG 224 (328)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCcC
Confidence 111111222333221 123689999999999999 4 8999999987643
No 437
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.93 E-value=0.0033 Score=61.38 Aligned_cols=103 Identities=18% Similarity=0.101 Sum_probs=67.0
Q ss_pred CChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCeEEcCCCcEEEeccccccccCCCCCCcc
Q 039137 723 GSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKFLNPDSSNWS 802 (912)
Q Consensus 723 g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 802 (912)
-+|.+++... ..+++++++|.++.|.+.+|.-.-.+. .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc----------
Confidence 3788998543 367999999999999999988873211 112333457899999999988764 1111
Q ss_pred ccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCC
Q 039137 803 ELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHP 843 (912)
Q Consensus 803 ~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~p 843 (912)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888653 3457888999999999998864444
No 438
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.91 E-value=0.00078 Score=61.33 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=37.6
Q ss_pred eeeccccccC-cccccccccccccccccccCccccCCCcccccccccceEEEccCCcccc
Q 039137 473 ELDLSHNFLG-EKISSRICRMESLEKLNLSYNNLSGLIPRCFEEMHGLLHIDISYNKLEG 531 (912)
Q Consensus 473 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~l~ls~N~l~~ 531 (912)
.++.+++.|+ ..+|..+ -++|+.|+|++|+|+.+.+..|..+++|+.|+|++|+|.|
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5566666664 1333322 1356777777777777777777777778888888887776
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.88 E-value=0.0029 Score=69.02 Aligned_cols=142 Identities=16% Similarity=0.190 Sum_probs=85.1
Q ss_pred CceeeecCceEEEEEEeC--------CCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCCee
Q 039137 643 EHCIGKGGHGSVYRAKVP--------SGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 713 (912)
.+.+..|....+|++... +++.|++|+..... . ....+.+|..+++.+. +.-..++++++..
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~----~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~---- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-Q----GVDSLVLESVMFAILAERSLGPQLYGVFPE---- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----C----CHHHHHHHHHHHHHHHHTTSSCCEEEEETT----
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-c----hHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----
Confidence 356878889999999864 35789999863211 1 2455668999999884 4444667766643
Q ss_pred eEEEeecCCCChhhH--------------h---hccC--CcccCC--HHHHHHHHHHHHH-------------------H
Q 039137 714 FIIYEYLESGSLDKI--------------L---CNDA--SAKELG--WTQRLNVIKGVAD-------------------A 753 (912)
Q Consensus 714 ~lv~e~~~~g~L~~~--------------l---~~~~--~~~~l~--~~~~~~i~~~i~~-------------------~ 753 (912)
.+||||++|.++..- + +... ..+... +.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 399999998655311 0 1111 011122 4555555544422 1
Q ss_pred HHHH----HhC-CCCCeeecCCCCCCeEEcCC----CcEEEeccccccc
Q 039137 754 LFYL----HNN-CFPPIVHRDISSKNVLLDLG----YEAHVSDFGIAKF 793 (912)
Q Consensus 754 L~~L----H~~-~~~~ivH~Dlk~~Nill~~~----~~~kl~Dfgla~~ 793 (912)
++.| ... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2332 221 12368999999999999876 7899999998864
No 440
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.83 E-value=0.002 Score=71.93 Aligned_cols=73 Identities=18% Similarity=0.250 Sum_probs=50.6
Q ss_pred CceeeecCceEEEEEEeCC--------CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCCee
Q 039137 643 EHCIGKGGHGSVYRAKVPS--------GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 713 (912)
.+.|+.|....||++...+ ++.|++|+...+ . ..+.+.+|..+++.+. +.-.+++++.+..
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~----~~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--E----TESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--C----CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--C----cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 3678889999999998653 578999987432 1 1244557999999885 3334667776532
Q ss_pred eEEEeecCCCCh
Q 039137 714 FIIYEYLESGSL 725 (912)
Q Consensus 714 ~lv~e~~~~g~L 725 (912)
.+||||++|.++
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999987443
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.55 E-value=0.012 Score=65.82 Aligned_cols=74 Identities=16% Similarity=0.153 Sum_probs=48.0
Q ss_pred CceeeecCceEEEEEEeCC-CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc-cccEEEEEEcCCeeeEEEeec
Q 039137 643 EHCIGKGGHGSVYRAKVPS-GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN-IVKFYGFCSHPKHSFIIYEYL 720 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~ 720 (912)
.+.|+.|-...+|++...+ ++.|++|+......... . ..+|..+++.+...+ ..++++++. + .+||||+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i--d---R~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I 183 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII--N---REREKKISCILYNKNIAKKIYVFFT--N--GRIEEFM 183 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS--C---HHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc--C---HHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEee
Confidence 3678889999999998764 47888998753221111 1 147899999886433 466777762 2 3599999
Q ss_pred CCCCh
Q 039137 721 ESGSL 725 (912)
Q Consensus 721 ~~g~L 725 (912)
+|.++
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 88544
No 442
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.55 E-value=0.0021 Score=58.39 Aligned_cols=56 Identities=27% Similarity=0.254 Sum_probs=30.9
Q ss_pred cccccCcccC-ccccccccccccccEEEecccccccccchhhhcccccceeeccccccC
Q 039137 425 YLDLSANNLS-NFVPESLGSLVKLYYLNLSHNKLSQQIPIELDNLIHLSELDLSHNFLG 482 (912)
Q Consensus 425 ~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 482 (912)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555555554 12343333 35666666666666555555566666666666666553
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.49 E-value=0.011 Score=63.83 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=28.4
Q ss_pred CCeeecCCCCCCeEEcCCCcEEEecccccccc
Q 039137 763 PPIVHRDISSKNVLLDLGYEAHVSDFGIAKFL 794 (912)
Q Consensus 763 ~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~~ 794 (912)
..++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999887654
No 444
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.12 E-value=0.0088 Score=65.34 Aligned_cols=74 Identities=9% Similarity=0.090 Sum_probs=44.7
Q ss_pred CceeeecCceEEEEEEeCC---------CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCc-cccEEEEEEcCCe
Q 039137 643 EHCIGKGGHGSVYRAKVPS---------GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRN-IVKFYGFCSHPKH 712 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~n-iv~l~~~~~~~~~ 712 (912)
.+.++.|....+|+....+ ++.+++|+...... .......|...++.+...+ +.++++.. +
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-----~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~-- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-----ELYNTISEFEVYKTMSKYKIAPQLLNTF--N-- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-----GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-----ceecHHHHHHHHHHHHhcCCCCceEEec--C--
Confidence 3567888889999998653 26888888653211 1112347888888885333 45677554 2
Q ss_pred eeEEEeecCCCCh
Q 039137 713 SFIIYEYLESGSL 725 (912)
Q Consensus 713 ~~lv~e~~~~g~L 725 (912)
-++||||++|.++
T Consensus 109 ~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 GGRIEEWLYGDPL 121 (369)
T ss_dssp TEEEEECCCSEEC
T ss_pred CcEEEEEecCCcC
Confidence 3789999988543
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.72 E-value=0.047 Score=59.71 Aligned_cols=146 Identities=18% Similarity=0.199 Sum_probs=85.8
Q ss_pred ceeeecCceEEEEEEeCC--------CCEEEEEEccCCCCCC-------chHH-------HHHHHHHHHHHhhcC-CCcc
Q 039137 644 HCIGKGGHGSVYRAKVPS--------GEIFAVKKFHSPLPGE-------MSFQ-------QEEFLNEIQALTEIR-HRNI 700 (912)
Q Consensus 644 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~-------~~~~-------~~~~~~Ei~~l~~l~-h~ni 700 (912)
+.|..|-...+|++..++ ++.|.+++.-.....- .... .+.+..|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 567778899999998753 3678998874322100 0001 123346889988884 5556
Q ss_pred ccEEEEEEcCCeeeEEEeecCCCChhh--Hh---------------hccC--CcccCC--HHHHHHHHHHHH--------
Q 039137 701 VKFYGFCSHPKHSFIIYEYLESGSLDK--IL---------------CNDA--SAKELG--WTQRLNVIKGVA-------- 751 (912)
Q Consensus 701 v~l~~~~~~~~~~~lv~e~~~~g~L~~--~l---------------~~~~--~~~~l~--~~~~~~i~~~i~-------- 751 (912)
.++++++.. .+|+||++|.+|.. +. +... -..... +.++.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 777777642 28999999755421 10 1110 111122 234444443321
Q ss_pred --------------HHH----HHHHhC-CCCCeeecCCCCCCeEEcCC------CcEEEeccccccc
Q 039137 752 --------------DAL----FYLHNN-CFPPIVHRDISSKNVLLDLG------YEAHVSDFGIAKF 793 (912)
Q Consensus 752 --------------~~L----~~LH~~-~~~~ivH~Dlk~~Nill~~~------~~~kl~Dfgla~~ 793 (912)
.-+ +++... ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 223322 12368999999999999887 7899999998763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.16 E-value=0.06 Score=59.46 Aligned_cols=141 Identities=9% Similarity=0.075 Sum_probs=85.3
Q ss_pred CceeeecCceEEEEEEeCC--------CCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcC-CCccccEEEEEEcCCee
Q 039137 643 EHCIGKGGHGSVYRAKVPS--------GEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIR-HRNIVKFYGFCSHPKHS 713 (912)
Q Consensus 643 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~-h~niv~l~~~~~~~~~~ 713 (912)
.+.+..|....+|+....+ ++.|++|+........ -...+|..+++.+. +.-..++++.+ . -
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-----idR~~E~~~l~~L~~~gi~P~l~~~~--~--~ 145 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-----YDSKVELDVFRYLSNINIAPNIIADF--P--E 145 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-----CCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-----cCHHHHHHHHHHHHhcCCCCCEEEEc--C--C
Confidence 3567788899999998753 5789999864322111 11247888888884 43356666543 2 3
Q ss_pred eEEEeecCCCChhh--H------------h---hccC----------CcccCCHHHHHHHHHHH----------------
Q 039137 714 FIIYEYLESGSLDK--I------------L---CNDA----------SAKELGWTQRLNVIKGV---------------- 750 (912)
Q Consensus 714 ~lv~e~~~~g~L~~--~------------l---~~~~----------~~~~l~~~~~~~i~~~i---------------- 750 (912)
+.||||++|.++.. + + +... ...+--+.++.++..++
T Consensus 146 ~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 225 (424)
T 3mes_A 146 GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELY 225 (424)
T ss_dssp EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHH
T ss_pred CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccH
Confidence 78999999865421 0 0 1100 11111244444444332
Q ss_pred ---HHHHHHHHh---------------------CCCCCeeecCCCCCCeEEcCCCcEEEeccccccc
Q 039137 751 ---ADALFYLHN---------------------NCFPPIVHRDISSKNVLLDLGYEAHVSDFGIAKF 793 (912)
Q Consensus 751 ---~~~L~~LH~---------------------~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfgla~~ 793 (912)
...+++|.+ .....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 226 ~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 226 SKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122333321 11236899999999999 8888999999998864
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=93.38 E-value=0.28 Score=47.96 Aligned_cols=117 Identities=9% Similarity=0.077 Sum_probs=85.1
Q ss_pred CCCccccEEEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCCCCe
Q 039137 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISSKNV 775 (912)
Q Consensus 696 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~Ni 775 (912)
.||++++. .+-.+.+.+.+.++.-+. ...+- .-...+....++++.+|+....+++.+ +|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~--~~~f~----~ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDN--HTPFD----NIKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTT--SEEGG----GGGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcc--cCCHH----HHHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 58888877 577777777666665432 22221 234577899999999999999887777 9999999999
Q ss_pred EEcCCCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccc
Q 039137 776 LLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDF 846 (912)
Q Consensus 776 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~ 846 (912)
+++.++.+++.-.|+-..+. |. ..+...=.-.+=+++..++++++.|+.
T Consensus 111 ~f~~~~~p~i~~RGik~~l~-----------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVVD-----------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp EECTTSCEEESCCEETTTBS-----------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEcCCCCEEEEEccCccCCC-----------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999998877654332 22 123334445677888999999999863
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=91.53 E-value=0.8 Score=44.88 Aligned_cols=116 Identities=9% Similarity=0.043 Sum_probs=83.2
Q ss_pred CCCccccEEEEEEcCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHH-HHHhCCCCCeeecCCCCCC
Q 039137 696 RHRNIVKFYGFCSHPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALF-YLHNNCFPPIVHRDISSKN 774 (912)
Q Consensus 696 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlk~~N 774 (912)
.||++ -..+-.+++.+.+.++.-+++.=...+ ...+...+++++.+|+...+ +++.+ +|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57888 555667778887777765343222223 34778999999999999888 77766 899999999
Q ss_pred eEEcCCCcEEEeccccccccCCCCCCccccccccccccccccccCCCCcchhHHHHHHHHHHHHhCCCCccc
Q 039137 775 VLLDLGYEAHVSDFGIAKFLNPDSSNWSELAGTHGYVAPELAYTLKVTEKCDVYSFGVLALEVIKGKHPRDF 846 (912)
Q Consensus 775 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~sDvwslG~vl~elltg~~pf~~ 846 (912)
++++.++.+++.-.|+-..+ +|.. .++..=.-++=+++..++.+++.|+.
T Consensus 115 L~f~~~~~p~i~hRGi~~~l-----------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKESL-----------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EEECTTCCEEESCCEETTTB-----------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEEeCCCcEEEEEcCCcccC-----------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999999877765433 3321 22233344667888889999998863
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=90.65 E-value=1 Score=49.36 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=24.9
Q ss_pred eeecCCCCCCeEE------cCCCcEEEeccccccc
Q 039137 765 IVHRDISSKNVLL------DLGYEAHVSDFGIAKF 793 (912)
Q Consensus 765 ivH~Dlk~~Nill------~~~~~~kl~Dfgla~~ 793 (912)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4566799999998864
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=77.40 E-value=0.48 Score=33.01 Aligned_cols=22 Identities=14% Similarity=0.271 Sum_probs=9.8
Q ss_pred hhHHHHHHHHhhheeeeeeccc
Q 039137 582 LGMVALFIALTGFFFIFHQRKN 603 (912)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~r~~ 603 (912)
.|++++++++..+++++|+|+.
T Consensus 19 gGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 19 GALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHhhhhHh
Confidence 3344444444444455444443
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=69.69 E-value=0.69 Score=32.14 Aligned_cols=20 Identities=15% Similarity=0.165 Sum_probs=8.6
Q ss_pred HHHHHHHHhhheeeeeeccc
Q 039137 584 MVALFIALTGFFFIFHQRKN 603 (912)
Q Consensus 584 ~~~~~~~~~~~~~~~~~r~~ 603 (912)
++++++++..+++++|+|+.
T Consensus 20 v~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 44444444444444444443
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=65.84 E-value=0.7 Score=51.65 Aligned_cols=64 Identities=8% Similarity=-0.051 Sum_probs=18.7
Q ss_pred CCCceeeecCceEEEEEEeCC-CCEEEE------EEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEEEc
Q 039137 641 NAEHCIGKGGHGSVYRAKVPS-GEIFAV------KKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFCSH 709 (912)
Q Consensus 641 ~~~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~~~ 709 (912)
.+.+.+| ||.||+|.+.. ..+||| |..+..... ......+.+|..+++.++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~--~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVS--EKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC-------------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccccc--ccccccccccccccccccccccCCCcceEEe
Confidence 3456676 99999998753 357888 655432211 1134568889999999999999999887643
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=61.66 E-value=1.7 Score=30.18 Aligned_cols=27 Identities=15% Similarity=0.367 Sum_probs=11.8
Q ss_pred eehhhhhHHHHHHHHhhheeeeeeccc
Q 039137 577 IVFPLLGMVALFIALTGFFFIFHQRKN 603 (912)
Q Consensus 577 i~~~~~~~~~~~~~~~~~~~~~~~r~~ 603 (912)
++..++|+++++++...+.+|.|+|+.
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhh
Confidence 344445544444444444444444443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=39.16 E-value=53 Score=27.37 Aligned_cols=42 Identities=14% Similarity=0.096 Sum_probs=19.8
Q ss_pred CCccccccccccceEecccccccCCCCcccCCCCCccEEEccC
Q 039137 292 TVPKSFRNLTDLVKLRLNQNYLTGNISETFGTYPNLTFIDLSN 334 (912)
Q Consensus 292 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 334 (912)
+-..+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344555555555555443 3333444555555555555443
No 455
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=32.61 E-value=2.8e+02 Score=30.74 Aligned_cols=140 Identities=14% Similarity=0.041 Sum_probs=97.2
Q ss_pred eeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEE-----------------
Q 039137 645 CIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFC----------------- 707 (912)
Q Consensus 645 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~----------------- 707 (912)
.+.-|--|.|-.+-.--+-.++.|+++.......+..++++++...+.+ +|..|=++-+..
T Consensus 313 i~APGikGmVM~VFTLPSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eLL 390 (578)
T 3eps_A 313 IEAPGIRGMVMLVFTLPGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPALM 390 (578)
T ss_dssp EECSSCCCSSEEEEECTTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHHH
T ss_pred EECCCCCceEEEEEcCCCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHHH
Confidence 5778888999888655677789999988766555545666655555544 355444432211
Q ss_pred ------------EcCCee---eEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCCCCeeecCCCC
Q 039137 708 ------------SHPKHS---FIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGVADALFYLHNNCFPPIVHRDISS 772 (912)
Q Consensus 708 ------------~~~~~~---~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~ 772 (912)
.+++.. .+.+|.- ...|.-++.. -+.+++...+.+--.|+..|-.. +|.-||.-.
T Consensus 391 ~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~------a~~~~~~~av~eYG~AIKqLAaA---NIFPGDML~ 460 (578)
T 3eps_A 391 ELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQ------VEGQQLRDAIEEYGNAIRQLAAA---NIFPGDMLF 460 (578)
T ss_dssp HHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHH------CCTHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred HHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhh------CCHHHHHHHHHHHHHHHHHHHHh---cCCCccccc
Confidence 112221 2233321 2355556632 34577888999999999999999 999999999
Q ss_pred CCeEEcCCCcEEEeccccccccCC
Q 039137 773 KNVLLDLGYEAHVSDFGIAKFLNP 796 (912)
Q Consensus 773 ~Nill~~~~~~kl~Dfgla~~~~~ 796 (912)
.|+=++..|+|..-|+.-...+.+
T Consensus 461 KNFGVTRhgRVVFYDYDEI~ylTd 484 (578)
T 3eps_A 461 KNFGVTRHGRVVFYDYDEICYMTE 484 (578)
T ss_dssp GGEEECTTCCEEECCGGGCEESTT
T ss_pred ccCCccccceEEEecccceeeecc
Confidence 999999999999999998776653
No 456
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=31.35 E-value=7.8 Score=25.37 Aligned_cols=25 Identities=16% Similarity=0.389 Sum_probs=10.8
Q ss_pred eehhhhhHHHHHHHHhhheeeeeec
Q 039137 577 IVFPLLGMVALFIALTGFFFIFHQR 601 (912)
Q Consensus 577 i~~~~~~~~~~~~~~~~~~~~~~~r 601 (912)
+..+++|+++++++...+.++.|+|
T Consensus 10 IaagVvglll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 10 IIATVVGVLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHHHHHHHHTTTTTHHHHHC
T ss_pred eHHHHHHHHHHHHHHHHhheEEeec
Confidence 3344455333344334444444444
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.03 E-value=64 Score=26.89 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=25.1
Q ss_pred CcccCCcccCCccccchhhhccCccCCCCccccccccccceEecccc
Q 039137 265 LSGIIPQEIGNLKKLNSLLLAKNHFRGTVPKSFRNLTDLVKLRLNQN 311 (912)
Q Consensus 265 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n 311 (912)
++.+-..+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 33344455555666666655543 33344556666666666666553
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.41 E-value=2e+02 Score=29.79 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=70.7
Q ss_pred ceeeecCceEEEEEEeCCCCEEEEEEccCCCCCCchHHHHHHHHHHHHHhhcCCCccccEEEEE--------------E-
Q 039137 644 HCIGKGGHGSVYRAKVPSGEIFAVKKFHSPLPGEMSFQQEEFLNEIQALTEIRHRNIVKFYGFC--------------S- 708 (912)
Q Consensus 644 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~l~~~~--------------~- 708 (912)
+..-.|..|. |.+.. ++..|+||-.. ....+-+-.++...-.+.-|...-+. +. .
T Consensus 75 ~~s~~Gstgv-ff~~t-d~~~~VVK~s~-------~l~~E~l~s~LA~~LGlpiP~~Riv~-~~~~E~~e~~~~L~~~~~ 144 (342)
T 1cja_A 75 ERSEKGTEGL-FFVET-ESGVFIVKRST-------NIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDK 144 (342)
T ss_dssp EECCSTTSCE-EEEEE-SSCEEEEECCT-------THHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCS
T ss_pred EeccCCCCCe-EEEEe-CCCEEEEeCcH-------HHHHHHHHHHHHHHhCCCCCCeeEEe-eCcHHHHHHHHHHHHhhh
Confidence 4445565554 44444 57788999431 22445555555555555555522111 11 0
Q ss_pred --------cCCeeeEEEeecCCCChhhHhhccCCcccCCHHHHHHHHHHH--HHHHHHHHhCCCC-Cee-ecCCCCCCeE
Q 039137 709 --------HPKHSFIIYEYLESGSLDKILCNDASAKELGWTQRLNVIKGV--ADALFYLHNNCFP-PIV-HRDISSKNVL 776 (912)
Q Consensus 709 --------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~~i--~~~L~~LH~~~~~-~iv-H~Dlk~~Nil 776 (912)
......++|||.+|..|.+.-... ....+..+ ...++ +-+++++.....+ +.+ +.--.+.||+
T Consensus 145 ~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL 219 (342)
T 1cja_A 145 SFRVITTLANQANILLMELVRGITLNKLTTTS-APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIM 219 (342)
T ss_dssp SSCHHHHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEE
T ss_pred hhHHHHHhhcccceehhhhcCCCccccchhhh-hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheE
Confidence 012356999999976654432110 01113222 23333 3345666655331 111 1235789999
Q ss_pred EcCCCc-EEEeccccccc
Q 039137 777 LDLGYE-AHVSDFGIAKF 793 (912)
Q Consensus 777 l~~~~~-~kl~Dfgla~~ 793 (912)
+++++. +.++|-+.+..
T Consensus 220 ~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 220 LSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EESBTTCEEECSCCCCCC
T ss_pred EeCCCCeEEEEcCCcccc
Confidence 987554 88999998854
Done!