BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>039138
MKDDESLPTTTTLNVTKKESSDSSAFGKGRYKFWALAAILLLAFWSMFTGTVTLRWSAGN
LNRLSDDLGSPIHDDLDVLEMEEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAYEELSS
DVAEVRDAAITEIAKMSVRSLVNIDSPPFHSTSAHQFSKSLKLAERGRALLTSSGTG

High Scoring Gene Products

Symbol, full name Information P value
AT5G65650 protein from Arabidopsis thaliana 3.6e-57
AT4G36660 protein from Arabidopsis thaliana 1.6e-54
AT1G19380 protein from Arabidopsis thaliana 1.2e-24

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  039138
        (177 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155735 - symbol:AT5G65650 "AT5G65650" species...   588  3.6e-57   1
TAIR|locus:2115225 - symbol:AT4G36660 "AT4G36660" species...   563  1.6e-54   1
TAIR|locus:2016372 - symbol:AT1G19380 "AT1G19380" species...   281  1.2e-24   1


>TAIR|locus:2155735 [details] [associations]
            symbol:AT5G65650 "AT5G65650" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002688
            GenomeReviews:BA000015_GR HOGENOM:HOG000240138
            ProtClustDB:CLSN2690088 InterPro:IPR010608 Pfam:PF06708
            EMBL:AY084793 EMBL:BT002817 EMBL:BT004447 EMBL:AK175285
            EMBL:AK176717 IPI:IPI00524941 RefSeq:NP_569015.1 UniGene:At.24007
            PaxDb:Q8LFK6 PRIDE:Q8LFK6 EnsemblPlants:AT5G65650.1 GeneID:836691
            KEGG:ath:AT5G65650 TAIR:At5g65650 eggNOG:NOG270688
            InParanoid:Q8LFK6 OMA:LALWSMF PhylomeDB:Q8LFK6 ArrayExpress:Q8LFK6
            Genevestigator:Q8LFK6 Uniprot:Q8LFK6
        Length = 185

 Score = 588 (212.0 bits), Expect = 3.6e-57, P = 3.6e-57
 Identities = 115/174 (66%), Positives = 136/174 (78%)

Query:     1 MKDDESLPTTTT----LNVT-KKESSDSSAFGKGRYKFWXXXXXXXXXFWSMFTGTVTLR 55
             MKD +SLP +T+      VT KKE+  S+ F KGRYKFW         FWSM TGTV LR
Sbjct:     1 MKDGDSLPISTSSVAATTVTGKKETGYSALFSKGRYKFWALAAILLLAFWSMLTGTVNLR 60

Query:    56 WSAGNLNRLSDDLGSPIHDDLDVLEMEEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAY 115
             WSAGN+N  +DDL  PIH+DLDVLEMEEREKVVKHMWDVY N RRIRLPRFWQEAFEAAY
Sbjct:    61 WSAGNINHFTDDLVFPIHEDLDVLEMEEREKVVKHMWDVYNNGRRIRLPRFWQEAFEAAY 120

Query:   116 EELSSDVAEVRDAAITEIAKMSVRSLVNIDSPPFHSTSAHQFSKSLKLAERGRA 169
             EEL+SDV +V +AAI+EIA+MS+RS+V ID PP HST+  + +K+LKLA++GRA
Sbjct:   121 EELTSDVPDVVEAAISEIARMSIRSIV-IDPPPLHSTNVRELTKTLKLADKGRA 173


>TAIR|locus:2115225 [details] [associations]
            symbol:AT4G36660 "AT4G36660" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0005794 "Golgi apparatus" evidence=IDA]
            GO:GO:0005794 EMBL:CP002687 UniGene:At.48945 EMBL:BT012127
            EMBL:BT012201 IPI:IPI00521068 RefSeq:NP_195384.5 UniGene:At.31307
            UniGene:At.67948 PRIDE:Q6NLX7 EnsemblPlants:AT4G36660.1
            GeneID:829819 KEGG:ath:AT4G36660 TAIR:At4g36660
            HOGENOM:HOG000240138 OMA:RRIKLPR PhylomeDB:Q6NLX7
            ProtClustDB:CLSN2690088 Genevestigator:Q6NLX7 InterPro:IPR010608
            Pfam:PF06708 Uniprot:Q6NLX7
        Length = 179

 Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
 Identities = 114/170 (67%), Positives = 129/170 (75%)

Query:     1 MKDDESLPTTTTLNV--------TKKESSDSSAFGKGRYKFWXXXXXXXXXFWSMFTGTV 52
             MK+D++LPTTTT           +KKESSDS  FG+GRYKFW         FWSMFTGTV
Sbjct:     1 MKEDDALPTTTTTGTATGTAMANSKKESSDSVLFGRGRYKFWAFAAILLLAFWSMFTGTV 60

Query:    53 TLRWSAGNLNRLSDDLGSPIHDDLDVLEMEEREKVVKHMWDVYTNSRRIRLPRFWQEAFE 112
             TLR S GNLNRLS+DLG P +D+LDVLEMEEREKVVKHMWDVYTNSRRI+LPRFWQEAF 
Sbjct:    61 TLRLSTGNLNRLSEDLGIPNYDNLDVLEMEEREKVVKHMWDVYTNSRRIKLPRFWQEAFV 120

Query:   113 AAYEELSSDVAEVRDAAITEIAKMSVRSLVNIDSPPFHSTSAHQFSKSLK 162
             AAYEEL+SDV  VR+AAI EIAKMS RS + +D PP  S SA    ++LK
Sbjct:   121 AAYEELTSDVPGVREAAIGEIAKMSARS-ITLDPPPSRSMSARDLGRNLK 169


>TAIR|locus:2016372 [details] [associations]
            symbol:AT1G19380 "AT1G19380" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009612 "response to
            mechanical stimulus" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC025808
            HOGENOM:HOG000240138 InterPro:IPR010608 Pfam:PF06708 EMBL:BT012123
            EMBL:BT012381 EMBL:AK228954 IPI:IPI00519445 RefSeq:NP_173371.1
            UniGene:At.41752 STRING:Q9LN60 PRIDE:Q9LN60
            EnsemblPlants:AT1G19380.1 GeneID:838521 KEGG:ath:AT1G19380
            TAIR:At1g19380 eggNOG:NOG320087 OMA:FWREAFE PhylomeDB:Q9LN60
            ProtClustDB:CLSN2914212 Genevestigator:Q9LN60 Uniprot:Q9LN60
        Length = 147

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 69/147 (46%), Positives = 90/147 (61%)

Query:     1 MKDDESLPTTTTLNVTKKESSDSSAFGKGRYKFWXXXXXXXXXFWSMFTGTVTLRWSAGN 60
             MK DES    T L V K  + +    G   YK W         F SM TG+V+L+   G 
Sbjct:     1 MKFDES---KTLLPVRKPVNGNRKTAG---YKLWVLIAVLLLAFGSMLTGSVSLK-GIG- 52

Query:    61 LNRLSDDLGS-PIHDDLDVLEMEEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAYEELS 119
             L   +D + +    DDLDVLE+EEREKVV+ MWDVY  S  +++PRFW+EAFEAAYE L 
Sbjct:    53 LFHSADGVNAFSFGDDLDVLEIEEREKVVRQMWDVYGRSGGVKVPRFWREAFEAAYEFLI 112

Query:   120 SDVAEVRDAAITEIAKMSVRSLVNIDS 146
             SD A VR+AA+++IAK+S+   V  +S
Sbjct:   113 SDSAAVRNAAVSDIAKLSLVRFVKSES 139


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.128   0.375    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      177       168   0.00079  108 3  11 23  0.42    32
                                                     31  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  569 (61 KB)
  Total size of DFA:  151 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.44u 0.20s 16.64t   Elapsed:  00:00:00
  Total cpu time:  16.44u 0.20s 16.64t   Elapsed:  00:00:00
  Start:  Fri May 10 10:48:43 2013   End:  Fri May 10 10:48:43 2013

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