Query 039138
Match_columns 177
No_of_seqs 29 out of 31
Neff 2.0
Searched_HMMs 13730
Date Mon Mar 25 10:56:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039138.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/039138hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1eysh2 f.23.10.1 (H:7-43) Pho 42.2 6.3 0.00046 23.8 1.9 16 36-51 5-20 (37)
2 d2geya1 d.17.4.9 (A:2-145) Put 34.9 10 0.00074 24.6 2.2 20 81-100 2-21 (144)
3 d2e50a1 d.305.1.1 (A:1-222) Pr 32.9 11 0.00083 28.1 2.5 43 72-114 38-89 (222)
4 d1te4a_ a.118.1.16 (A:) MTH187 29.8 30 0.0022 20.9 3.8 45 82-137 37-81 (111)
5 d1t94a1 d.240.1.1 (A:411-515) 23.8 56 0.0041 20.0 4.3 51 51-103 47-98 (105)
6 d1h2sb_ f.17.4.1 (B:) Sensory 22.7 20 0.0014 23.2 1.8 18 119-136 28-45 (60)
7 d1zy9a2 c.1.8.13 (A:178-525) A 15.3 65 0.0047 23.9 3.6 42 41-101 269-310 (348)
8 d1u1ha1 c.1.22.2 (A:2-395) 5-m 14.5 37 0.0027 26.9 2.1 23 102-124 212-234 (394)
9 d1dpjb_ a.137.7.1 (B:) Protein 14.5 58 0.0042 18.3 2.4 21 108-128 7-27 (29)
10 d1oyza_ a.118.1.16 (A:) Hypoth 14.2 88 0.0064 20.1 3.7 46 81-137 33-78 (276)
No 1
>d1eysh2 f.23.10.1 (H:7-43) Photosystem II reaction centre subunit H, transmembrane region {Thermochromatium tepidum [TaxId: 1050]}
Probab=42.21 E-value=6.3 Score=23.80 Aligned_cols=16 Identities=44% Similarity=0.812 Sum_probs=11.9
Q ss_pred HHHHHHHHHHhhhhce
Q 039138 36 LAAILLLAFWSMFTGT 51 (177)
Q Consensus 36 LaAIlLLAfWSMftgs 51 (177)
+|-++|-+||-.|+|-
T Consensus 5 ~Aql~ly~Fw~FFagL 20 (37)
T d1eysh2 5 AAQITIWAFWLFFFGL 20 (37)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5667788888888774
No 2
>d2geya1 d.17.4.9 (A:2-145) Putative hydroxylase AclR {Streptomyces galilaeus [TaxId: 33899]}
Probab=34.94 E-value=10 Score=24.58 Aligned_cols=20 Identities=20% Similarity=0.237 Sum_probs=17.8
Q ss_pred HHHHHHHHhHhhhhhcCCCC
Q 039138 81 MEEREKVVKHMWDVYTNSRR 100 (177)
Q Consensus 81 mEeREKvVr~MWDvYt~s~~ 100 (177)
|+|+++||++|.|.|.+.+-
T Consensus 2 m~~~~~l~~~~~~A~n~~D~ 21 (144)
T d2geya1 2 MAERKALCLEMVAAWNRWDL 21 (144)
T ss_dssp HHHHHHHHHHHHHHHHTTCT
T ss_pred cchHHHHHHHHHHHHHcCCH
Confidence 89999999999999988764
No 3
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.89 E-value=11 Score=28.10 Aligned_cols=43 Identities=16% Similarity=0.546 Sum_probs=25.0
Q ss_pred CCCCCchhhHHHHHHHH---hHhhh----hhcCCCC--cCcchHHHHHHHHH
Q 039138 72 IHDDLDVLEMEEREKVV---KHMWD----VYTNSRR--IRLPRFWQEAFEAA 114 (177)
Q Consensus 72 ~~dDlDvLEmEeREKvV---r~MWD----vYt~s~~--vrLprFWqEAFeAA 114 (177)
++.++|.|+.|-.+++. +.+.. +|.+-+. -++|.||.-||...
T Consensus 38 iQ~e~~~l~~e~~~e~~~le~k~~~~~~ply~~R~~iI~gIP~FW~~~l~n~ 89 (222)
T d2e50a1 38 VQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPNFWVTTFVNH 89 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccHHHHHHHcC
Confidence 45567777766544333 33333 3332111 47999999999864
No 4
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=29.84 E-value=30 Score=20.89 Aligned_cols=45 Identities=18% Similarity=0.170 Sum_probs=32.2
Q ss_pred HHHHHHHhHhhhhhcCCCCcCcchHHHHHHHHHHHHhhcchhhhHHHHHHHHHhhh
Q 039138 82 EEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAYEELSSDVAEVRDAAITEIAKMS 137 (177)
Q Consensus 82 EeREKvVr~MWDvYt~s~~vrLprFWqEAFeAAYeeL~sD~~~vrdaAisEIAkmS 137 (177)
..|...++-+-.++. +++.++-.+-|.++.+.||.+|+.=++++.
T Consensus 37 ~vR~~a~~~L~~~~~-----------~~~~~~L~~~l~d~~~~VR~~a~~aL~~i~ 81 (111)
T d1te4a_ 37 RIRGAAAWIIGNFQD-----------ERAVEPLIKLLEDDSGFVRSGAARSLEQIG 81 (111)
T ss_dssp HHHHHHHHHHGGGCS-----------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcch-----------hhhHHHHHhhhccchhHHHHHHHHHHHHhC
Confidence 456666666543321 346666677788999999999999888875
No 5
>d1t94a1 d.240.1.1 (A:411-515) DNA polymerase kappa {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.83 E-value=56 Score=20.03 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=27.4
Q ss_pred eEEEEeccCCcccccCCCCCCCCCCCchhhHHHHHHHHhHhhhhhc-CCCCcCc
Q 039138 51 TVTLRWSAGNLNRLSDDLGSPIHDDLDVLEMEEREKVVKHMWDVYT-NSRRIRL 103 (177)
Q Consensus 51 sVtLrwSag~Ln~~s~dld~p~~dDlDvLEmEeREKvVr~MWDvYt-~s~~vrL 103 (177)
+|.+|++.-.-..-+--++.|+.|.-++.+ .=.++...+|+-.. ....|||
T Consensus 47 ~lkir~~df~~~trs~tl~~~t~~~~~i~~--~a~~Ll~~~~~~~~~~~~~iRL 98 (105)
T d1t94a1 47 TIKLKNVNFEVKTRASTVSSVVSTAEEIFA--IAKELLKTEIDADFPHPLRLRL 98 (105)
T ss_dssp EEEEEETTCCEEEECC-CCCCCCC--CHHH--HHHHHHHHHHSSSTTSCCCEEE
T ss_pred EEEEEeCCCceeEEEEEcCccCCCHHHHHH--HHHHHHHHHHhccCCCCCCEEE
Confidence 556667644444556678888866655432 23456777776432 3445554
No 6
>d1h2sb_ f.17.4.1 (B:) Sensory rhodopsin II transducer, Htr2 {Natronomonas pharaonis [TaxId: 2257]}
Probab=22.68 E-value=20 Score=23.16 Aligned_cols=18 Identities=33% Similarity=0.567 Sum_probs=15.7
Q ss_pred hcchhhhHHHHHHHHHhh
Q 039138 119 SSDVAEVRDAAITEIAKM 136 (177)
Q Consensus 119 ~sD~~~vrdaAisEIAkm 136 (177)
++|...|.++|+|-|--+
T Consensus 28 tgdaaavqeaavsailgl 45 (60)
T d1h2sb_ 28 TGDAAAVQEAAVSAILGL 45 (60)
T ss_dssp HTCHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHH
Confidence 689999999999998654
No 7
>d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=15.34 E-value=65 Score=23.86 Aligned_cols=42 Identities=17% Similarity=0.305 Sum_probs=25.3
Q ss_pred HHHHHhhhhceEEEEeccCCcccccCCCCCCCCCCCchhhHHHHHHHHhHhhhhhcCCCCc
Q 039138 41 LLAFWSMFTGTVTLRWSAGNLNRLSDDLGSPIHDDLDVLEMEEREKVVKHMWDVYTNSRRI 101 (177)
Q Consensus 41 LLAfWSMftgsVtLrwSag~Ln~~s~dld~p~~dDlDvLEmEeREKvVr~MWDvYt~s~~v 101 (177)
.+++|+|+.|-.- +.|||.-|. ++.-+++|+.-.+|.++.++
T Consensus 269 ~~~l~a~~~~pl~------------------~~~dl~~l~-~~~~~llk~~~~~~~~~~~i 310 (348)
T d1zy9a2 269 YSYTCGVLDNMII------------------ESDDLSLVR-DHGKKVLKETLELLGGRPRV 310 (348)
T ss_dssp HHHHHHHTTCCEE------------------ECSCGGGCC-HHHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHhccchh------------------ccCCcccCC-HHHHHHHHHHHHHhccchhh
Confidence 4567777766543 234454444 35566778888999665443
No 8
>d1u1ha1 c.1.22.2 (A:2-395) 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase MetE {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=14.55 E-value=37 Score=26.92 Aligned_cols=23 Identities=35% Similarity=0.411 Sum_probs=19.3
Q ss_pred CcchHHHHHHHHHHHHhhcchhh
Q 039138 102 RLPRFWQEAFEAAYEELSSDVAE 124 (177)
Q Consensus 102 rLprFWqEAFeAAYeeL~sD~~~ 124 (177)
.++.-|+++|+.||+.|..-.++
T Consensus 212 dl~~~~~~~~~~ay~~l~~~~~~ 234 (394)
T d1u1ha1 212 DLEGQKLQAFTGAYAELESTLSG 234 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTTTTT
T ss_pred cCCHHHHHHHHHHHHHHHhhcCC
Confidence 56888999999999999876553
No 9
>d1dpjb_ a.137.7.1 (B:) Proteinase A inhibitor IA3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=14.47 E-value=58 Score=18.31 Aligned_cols=21 Identities=38% Similarity=0.540 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhhcchhhhHHH
Q 039138 108 QEAFEAAYEELSSDVAEVRDA 128 (177)
Q Consensus 108 qEAFeAAYeeL~sD~~~vrda 128 (177)
.|-|+..-|.|.+|..-|.||
T Consensus 7 seifqsskeklqgdakvvsda 27 (29)
T d1dpjb_ 7 SEIFQSSKEKLQGDAKVVSDA 27 (29)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHhccchhHHhhh
Confidence 478999999999999888876
No 10
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=14.21 E-value=88 Score=20.14 Aligned_cols=46 Identities=17% Similarity=0.001 Sum_probs=29.3
Q ss_pred HHHHHHHHhHhhhhhcCCCCcCcchHHHHHHHHHHHHhhcchhhhHHHHHHHHHhhh
Q 039138 81 MEEREKVVKHMWDVYTNSRRIRLPRFWQEAFEAAYEELSSDVAEVRDAAITEIAKMS 137 (177)
Q Consensus 81 mEeREKvVr~MWDvYt~s~~vrLprFWqEAFeAAYeeL~sD~~~vrdaAisEIAkmS 137 (177)
.+-|...++-+-.+.+ +++.....+-|.+..+.||..|+.-+.++.
T Consensus 33 ~~vR~~A~~~L~~~~~-----------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~ 78 (276)
T d1oyza_ 33 SLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIK 78 (276)
T ss_dssp HHHHHHHHHHHHHHCC-----------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhhCC-----------HhHHHHHHHHHcCCCHHHHHHHHHHHHHhc
Confidence 3556666665543321 466666677677777888888877776654
Done!