Query 039142
Match_columns 137
No_of_seqs 108 out of 1115
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 06:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/039142hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 99.9 8.3E-21 1.8E-25 138.8 11.8 102 31-132 24-127 (489)
2 PLN02971 tryptophan N-hydroxyl 99.8 1.4E-18 3.1E-23 129.3 11.9 101 30-133 54-160 (543)
3 PLN02687 flavonoid 3'-monooxyg 99.8 1.8E-18 4E-23 128.1 10.7 132 1-133 1-134 (517)
4 PTZ00404 cytochrome P450; Prov 99.7 2.4E-17 5.2E-22 121.2 12.1 104 27-132 23-126 (482)
5 PLN03112 cytochrome P450 famil 99.7 3.3E-17 7.1E-22 121.3 12.1 104 27-132 26-131 (514)
6 PLN00110 flavonoid 3',5'-hydro 99.7 1.3E-16 2.8E-21 117.9 12.6 106 27-133 25-131 (504)
7 PLN02183 ferulate 5-hydroxylas 99.7 8.2E-17 1.8E-21 119.3 10.9 102 30-132 33-135 (516)
8 PLN00168 Cytochrome P450; Prov 99.7 4.3E-16 9.3E-21 115.6 12.6 99 30-131 32-136 (519)
9 PLN03234 cytochrome P450 83B1; 99.7 7E-16 1.5E-20 113.9 12.1 103 30-132 25-128 (499)
10 PLN02196 abscisic acid 8'-hydr 99.7 4.2E-16 9.2E-21 114.2 9.6 99 31-132 33-132 (463)
11 PLN02290 cytokinin trans-hydro 99.7 2.1E-16 4.6E-21 117.1 7.8 104 28-132 37-158 (516)
12 PLN02394 trans-cinnamate 4-mon 99.7 1.6E-15 3.4E-20 112.1 12.2 104 29-132 26-130 (503)
13 PLN02500 cytochrome P450 90B1 99.6 6E-16 1.3E-20 114.0 8.2 102 29-133 34-140 (490)
14 PLN02774 brassinosteroid-6-oxi 99.6 2.9E-16 6.3E-21 115.0 6.4 101 28-132 26-127 (463)
15 PLN02966 cytochrome P450 83A1 99.6 1.6E-15 3.4E-20 112.2 10.0 106 27-132 23-129 (502)
16 KOG0158 Cytochrome P450 CYP3/C 99.6 2.4E-15 5.2E-20 109.9 10.4 105 27-132 25-132 (499)
17 KOG0157 Cytochrome P450 CYP4/C 99.6 1.3E-15 2.8E-20 112.5 8.3 102 31-133 33-136 (497)
18 PLN02987 Cytochrome P450, fami 99.6 1.5E-15 3.2E-20 111.6 8.2 101 29-132 26-131 (472)
19 PLN02655 ent-kaurene oxidase 99.6 3.3E-15 7.1E-20 109.6 7.7 95 35-131 1-98 (466)
20 PLN03018 homomethionine N-hydr 99.6 2.1E-14 4.6E-19 106.9 11.3 101 33-133 40-143 (534)
21 PLN03141 3-epi-6-deoxocathaste 99.5 2E-14 4.4E-19 105.0 6.8 100 30-132 4-108 (452)
22 PLN02302 ent-kaurenoic acid ox 99.5 2.5E-13 5.4E-18 100.1 11.0 101 28-132 37-144 (490)
23 PLN02169 fatty acid (omega-1)- 99.5 3.6E-13 7.8E-18 99.7 10.0 101 31-133 29-134 (500)
24 PF00067 p450: Cytochrome P450 99.5 3.4E-14 7.4E-19 102.6 3.5 98 35-132 1-101 (463)
25 PLN03195 fatty acid omega-hydr 99.4 5.3E-13 1.1E-17 99.1 8.2 96 34-132 31-129 (516)
26 PLN02936 epsilon-ring hydroxyl 99.2 8.3E-11 1.8E-15 87.0 6.3 98 34-133 13-114 (489)
27 KOG0159 Cytochrome P450 CYP11/ 99.1 1.2E-10 2.6E-15 84.9 6.4 102 30-132 47-156 (519)
28 PLN02738 carotene beta-ring hy 99.0 1.4E-09 3E-14 82.8 7.4 86 45-132 143-228 (633)
29 KOG0684 Cytochrome P450 [Secon 99.0 5.7E-09 1.2E-13 75.1 8.6 66 33-99 31-97 (486)
30 PLN02648 allene oxide synthase 98.9 6.8E-10 1.5E-14 82.0 3.3 97 32-132 16-132 (480)
31 PLN02426 cytochrome P450, fami 98.8 5.8E-08 1.3E-12 72.3 9.8 89 41-133 49-138 (502)
32 COG2124 CypX Cytochrome P450 [ 93.6 0.15 3.3E-06 37.4 4.6 77 55-132 24-105 (411)
33 PF13625 Helicase_C_3: Helicas 53.6 36 0.00078 20.7 4.1 40 54-95 75-114 (129)
34 KOG0114 Predicted RNA-binding 51.8 51 0.0011 19.8 5.4 60 32-94 11-76 (124)
35 TIGR02976 phageshock_pspB phag 49.6 45 0.00097 18.5 4.2 6 88-93 61-66 (75)
36 PF05961 Chordopox_A13L: Chord 46.9 47 0.001 18.0 3.4 18 5-22 6-23 (68)
37 KOG3653 Transforming growth fa 43.9 1.5E+02 0.0033 23.0 7.6 36 63-99 220-256 (534)
38 PF15330 SIT: SHP2-interacting 43.5 71 0.0015 19.0 5.1 11 40-50 45-55 (107)
39 PRK09458 pspB phage shock prot 41.3 64 0.0014 17.9 3.8 14 86-99 59-72 (75)
40 PF06667 PspB: Phage shock pro 39.6 69 0.0015 17.8 4.3 9 87-95 60-68 (75)
41 PHA03049 IMV membrane protein; 37.9 69 0.0015 17.3 3.3 18 5-22 6-23 (68)
42 KOG0107 Alternative splicing f 36.2 1E+02 0.0022 20.4 4.1 47 43-92 14-64 (195)
43 PF08675 RNA_bind: RNA binding 31.4 1.1E+02 0.0023 17.6 3.9 40 55-94 21-61 (87)
44 PF06679 DUF1180: Protein of u 30.1 96 0.0021 20.1 3.4 7 16-22 111-117 (163)
45 PF13893 RRM_5: RNA recognitio 29.9 79 0.0017 15.6 4.3 35 60-94 2-40 (56)
46 PF15102 TMEM154: TMEM154 prot 29.0 23 0.0005 22.3 0.4 6 59-64 130-135 (146)
47 TIGR01661 ELAV_HUD_SF ELAV/HuD 27.3 2.3E+02 0.0051 20.1 5.9 58 42-102 272-339 (352)
48 COG3763 Uncharacterized protei 24.1 1.4E+02 0.003 16.4 3.6 7 1-7 1-7 (71)
49 PRK04778 septation ring format 23.4 1.5E+02 0.0032 23.3 3.9 19 53-71 60-78 (569)
50 PF14316 DUF4381: Domain of un 23.0 1.9E+02 0.004 18.0 3.7 11 84-94 94-104 (146)
51 PF07423 DUF1510: Protein of u 20.6 1E+02 0.0022 21.0 2.3 8 122-129 148-155 (217)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.85 E-value=8.3e-21 Score=138.84 Aligned_cols=102 Identities=41% Similarity=0.627 Sum_probs=85.9
Q ss_pred CCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc-cccc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL-DGKI 109 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~-~~~~ 109 (137)
..+.||||+++|++||++++....++..+.++.++||++|++|+|..|+|+++|+++++|++.+++..|++||.. ....
T Consensus 24 ~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~ 103 (489)
T KOG0156|consen 24 RRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLK 103 (489)
T ss_pred CCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHH
Confidence 378899999999999999995455999999999999999999999999999999999999999999999999982 1222
Q ss_pred ccccccCC-ccchhHHHHHHhhhh
Q 039142 110 DTDSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
....-+.| .++..|+.|+.+|+.
T Consensus 104 ~~~~~~~~i~~a~yG~~Wr~~Rr~ 127 (489)
T KOG0156|consen 104 YLSYGGKGIVFAPYGDYWREMRRF 127 (489)
T ss_pred HhcCCCCceEeCCCcHHHHHHHHH
Confidence 21223457 455599999999984
No 2
>PLN02971 tryptophan N-hydroxylase
Probab=99.79 E-value=1.4e-18 Score=129.32 Aligned_cols=101 Identities=24% Similarity=0.383 Sum_probs=82.4
Q ss_pred CCCCCCCCCCCCccccccccCCCCC-hHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSK-PQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~-~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
++.+.||||+++|++||+..+..+. .+..+.++.++|| +++++++|++++++++||+.++++|.+++..|++|+....
T Consensus 54 r~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~ 133 (543)
T PLN02971 54 KLHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA 133 (543)
T ss_pred CCCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence 3456789999999999998774333 4677899999999 7999999999999999999999999999889999986433
Q ss_pred ccccccccC----CccchhHHHHHHhhhhc
Q 039142 108 KIDTDSIYN----GFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 108 ~~~~~~~~~----g~~~~~~~~w~~~r~~~ 133 (137)
. ..++. +++...|+.|+.+|+.-
T Consensus 134 ~---~~l~~~~~~~l~~~~G~~Wk~~Rk~l 160 (543)
T PLN02971 134 Q---KILSNGYKTCVITPFGEQFKKMRKVI 160 (543)
T ss_pred h---hhccCCCCceEecCCcHHHHHHHHHH
Confidence 2 22233 37888999999999854
No 3
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.78 E-value=1.8e-18 Score=128.05 Aligned_cols=132 Identities=32% Similarity=0.511 Sum_probs=94.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHH-HhhhcCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCE
Q 039142 1 MALLIIINFLLCLPFFLFFFALQR-HITSRNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPS 79 (137)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 79 (137)
|+++....+.+++++++++..+.. ...+.+..+.||||+++|++||+..+ ..+++..+.++.++||++|++++|+.+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~ 79 (517)
T PLN02687 1 MDLPLPLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQL-GPKPHHTMAALAKTYGPLFRLRFGFVDV 79 (517)
T ss_pred CCCcchHHHHHHHHHHHHHHHHhccccCCCCCCCCCccCCCCCccccHHhc-CCchhHHHHHHHHHhCCeeEEecCCceE
Confidence 455543333333333333333322 22233444578899999999999887 5568889999999999999999999999
Q ss_pred EEEeCHHHHHHHHHhccccccCCCCccccccccccc-CCccchhHHHHHHhhhhc
Q 039142 80 LVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIY-NGFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 80 i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~w~~~r~~~ 133 (137)
++++||+.+++++.++...|.+++...........+ .++++.+|+.|+.+|+.-
T Consensus 80 vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l 134 (517)
T PLN02687 80 VVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKIC 134 (517)
T ss_pred EEeCCHHHHHHHHHhcchhhhcCCCccchhhhccCCceeEeCCCCHHHHHHHHHH
Confidence 999999999999999888898887644321111112 347777899999999854
No 4
>PTZ00404 cytochrome P450; Provisional
Probab=99.75 E-value=2.4e-17 Score=121.16 Aligned_cols=104 Identities=23% Similarity=0.429 Sum_probs=87.1
Q ss_pred hhcCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc
Q 039142 27 TSRNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD 106 (137)
Q Consensus 27 ~~~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~ 106 (137)
+.+.+...+|||+++|++||+..+ ..+++..+.++.++||+++++++|+.+.++++||+++++++.++...|.+++...
T Consensus 23 ~~~~~~~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~ 101 (482)
T PTZ00404 23 YKKIHKNELKGPIPIPILGNLHQL-GNLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIP 101 (482)
T ss_pred hhhccCCCCCCCCCCCeeccHhhh-cccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence 334566778999999999999887 5578899999999999999999999999999999999999998877888877654
Q ss_pred cccccccccCCccchhHHHHHHhhhh
Q 039142 107 GKIDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 107 ~~~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
.... ...+.|+.+.+|+.|+++|+.
T Consensus 102 ~~~~-~~~~~~l~~~~g~~w~~~Rk~ 126 (482)
T PTZ00404 102 SIKH-GTFYHGIVTSSGEYWKRNREI 126 (482)
T ss_pred eeee-eccCCceeccChHHHHHHHHH
Confidence 4322 334678889999999999884
No 5
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.74 E-value=3.3e-17 Score=121.29 Aligned_cols=104 Identities=33% Similarity=0.520 Sum_probs=84.4
Q ss_pred hhcCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc
Q 039142 27 TSRNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD 106 (137)
Q Consensus 27 ~~~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~ 106 (137)
+..+..+.+|||+++|++||+..+ ..+++..+.++.++||++|++++|+.+.++++||+++++++.++...|++++...
T Consensus 26 ~~~~~~~~ppgp~~~pl~G~~~~~-~~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~~~~~~ 104 (514)
T PLN03112 26 SMRKSLRLPPGPPRWPIVGNLLQL-GPLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDDVFASRPRTL 104 (514)
T ss_pred cccCCCCCccCCCCCCeeeeHHhc-CCchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCcccccCCCcc
Confidence 344555778999999999999887 5667888999999999999999999999999999999999998888898887643
Q ss_pred ccccccccc--CCccchhHHHHHHhhhh
Q 039142 107 GKIDTDSIY--NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 107 ~~~~~~~~~--~g~~~~~~~~w~~~r~~ 132 (137)
.... ...+ .+.+...|+.|+.+|+.
T Consensus 105 ~~~~-~~~g~~~~~~~~~g~~wk~~Rr~ 131 (514)
T PLN03112 105 AAVH-LAYGCGDVALAPLGPHWKRMRRI 131 (514)
T ss_pred ccee-eccCCCceEeCCCCHHHHHHHHH
Confidence 3222 1222 23567889999999986
No 6
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.72 E-value=1.3e-16 Score=117.94 Aligned_cols=106 Identities=28% Similarity=0.545 Sum_probs=85.8
Q ss_pred hhcCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc
Q 039142 27 TSRNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD 106 (137)
Q Consensus 27 ~~~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~ 106 (137)
......+.||+|+++|++||+..+ ...++.++.++.++||++|++++|+.+.++++||+++++++.++...|++++...
T Consensus 25 ~~~~~~~~pPgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~ 103 (504)
T PLN00110 25 LPKPSRKLPPGPRGWPLLGALPLL-GNMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNA 103 (504)
T ss_pred hhcccCCCcccCCCCCeeechhhc-CCchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence 344555778999999999998777 4567889999999999999999999999999999999999999888999887654
Q ss_pred cccccc-cccCCccchhHHHHHHhhhhc
Q 039142 107 GKIDTD-SIYNGFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 107 ~~~~~~-~~~~g~~~~~~~~w~~~r~~~ 133 (137)
...... ....++++..|+.|+++|+.-
T Consensus 104 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~ 131 (504)
T PLN00110 104 GATHLAYGAQDMVFADYGPRWKLLRKLS 131 (504)
T ss_pred chhhhccCCCceeeCCCCHHHHHHHHHH
Confidence 332211 112357888999999999854
No 7
>PLN02183 ferulate 5-hydroxylase
Probab=99.72 E-value=8.2e-17 Score=119.29 Aligned_cols=102 Identities=26% Similarity=0.459 Sum_probs=82.7
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
+..+.||||+++|++|++..+ ....+..+.++.++||++|++++|+.+.++++||+.+++++.+++..|++++......
T Consensus 33 ~~~~~ppgp~~~Pl~G~l~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 111 (516)
T PLN02183 33 RRLPYPPGPKGLPIIGNMLMM-DQLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS 111 (516)
T ss_pred CCCCCCcCCCCCCeeccHHhc-CCcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence 345678999999999999776 4446678899999999999999999999999999999999999888888887543321
Q ss_pred cc-ccccCCccchhHHHHHHhhhh
Q 039142 110 DT-DSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~-~~~~~g~~~~~~~~w~~~r~~ 132 (137)
.. ...+.+++...|+.|+++|+.
T Consensus 112 ~~~~~~~~~l~~~~g~~w~~~Rr~ 135 (516)
T PLN02183 112 YLTYDRADMAFAHYGPFWRQMRKL 135 (516)
T ss_pred ccccCCCceEeCCCChHHHHHHHH
Confidence 11 111356888999999999985
No 8
>PLN00168 Cytochrome P450; Provisional
Probab=99.70 E-value=4.3e-16 Score=115.55 Aligned_cols=99 Identities=25% Similarity=0.468 Sum_probs=78.6
Q ss_pred CCCCCCCCCCCCccccccccCC--CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFD--VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
+..+.||+|+++|++||+..+. ..+++..+.+++++||++|++++|+.+.++++||+.+++++.++...|++++....
T Consensus 32 ~~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~ 111 (519)
T PLN00168 32 KGRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVAS 111 (519)
T ss_pred CCCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccc
Confidence 4456788999999999987552 23467889999999999999999999999999999999999998888988876432
Q ss_pred cccccccc--CCcc--chhHHHHHHhhh
Q 039142 108 KIDTDSIY--NGFK--DNVRLMWERFLS 131 (137)
Q Consensus 108 ~~~~~~~~--~g~~--~~~~~~w~~~r~ 131 (137)
. ..++ .+.. ...|+.|+.+|+
T Consensus 112 ~---~~~~~~~~~~~~~~~G~~Wk~~Rr 136 (519)
T PLN00168 112 S---RLLGESDNTITRSSYGPVWRLLRR 136 (519)
T ss_pred h---hhhccCCCceeCCCCCHHHHHHHH
Confidence 1 1122 2333 378999999876
No 9
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.68 E-value=7e-16 Score=113.89 Aligned_cols=103 Identities=39% Similarity=0.630 Sum_probs=78.9
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
++.+.+|||+++|++||+..+...++..++.++.++||++|++++|+.++++++|||.+++++.++...|..++......
T Consensus 25 ~~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~~ 104 (499)
T PLN03234 25 KSLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQ 104 (499)
T ss_pred CCCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhhh
Confidence 45567899999999999988744467788999999999999999999999999999999999999888898887643321
Q ss_pred ccccccCC-ccchhHHHHHHhhhh
Q 039142 110 DTDSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
.....+.+ .+...++.|+.+|+.
T Consensus 105 ~~~~~~~~~~~~~~~~~w~~~Rr~ 128 (499)
T PLN03234 105 TMSYQGRELGFGQYTAYYREMRKM 128 (499)
T ss_pred hhccCCCccccCCCcHHHHHHHHH
Confidence 11111111 133455789888873
No 10
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.67 E-value=4.2e-16 Score=114.17 Aligned_cols=99 Identities=22% Similarity=0.378 Sum_probs=78.7
Q ss_pred CCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID 110 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~ 110 (137)
..+.||||+++|++||+..+...+++.++.++.++||+++++++++++.++++||+.+++++.++.+.| ++.......
T Consensus 33 ~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~--~~~~~~~~~ 110 (463)
T PLN02196 33 KLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLF--KPTFPASKE 110 (463)
T ss_pred CCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcc--cccCchHHH
Confidence 345677888899999987764577889999999999999999999999999999999999998877666 333332222
Q ss_pred ccccc-CCccchhHHHHHHhhhh
Q 039142 111 TDSIY-NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 111 ~~~~~-~g~~~~~~~~w~~~r~~ 132 (137)
...+ .|++..+|+.|+++|+.
T Consensus 111 -~~~g~~~l~~~~g~~w~~~Rk~ 132 (463)
T PLN02196 111 -RMLGKQAIFFHQGDYHAKLRKL 132 (463)
T ss_pred -HHcCcccccccCcHHHHHHHHH
Confidence 2334 36788899999999884
No 11
>PLN02290 cytokinin trans-hydroxylase
Probab=99.67 E-value=2.1e-16 Score=117.06 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=78.1
Q ss_pred hcCCCCCCCCCCCCccccccccCCC------------------CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHH
Q 039142 28 SRNNTKLPPGPWGLPFIGNLHQFDV------------------SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAK 89 (137)
Q Consensus 28 ~~~~~~~~p~p~~~p~~G~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~ 89 (137)
.....+.+|||+++|++||+..+.. ......+.++.++||++|++|+|+.+.++++||+.++
T Consensus 37 ~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~ 116 (516)
T PLN02290 37 KIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIK 116 (516)
T ss_pred HHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHH
Confidence 3345567899999999999877621 1222356789999999999999999999999999999
Q ss_pred HHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhhh
Q 039142 90 EILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 90 ~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
+++.++. .+.+++..........++.|++..+|+.|+.+|+.
T Consensus 117 ~il~~~~-~~~~r~~~~~~~~~~~~g~~l~~~~g~~Wk~~Rk~ 158 (516)
T PLN02290 117 ELLTKYN-TVTGKSWLQQQGTKHFIGRGLLMANGADWYHQRHI 158 (516)
T ss_pred HHHhcCC-CCCCCcchhhhHHHHHhcCCccccCchHHHHHHhh
Confidence 9998873 45555532221111334678888999999999885
No 12
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.67 E-value=1.6e-15 Score=112.11 Aligned_cols=104 Identities=30% Similarity=0.368 Sum_probs=81.9
Q ss_pred cCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
.++.+.+|||++.|++|++..+.....+..+.++.++||++|++++|+.+.++++||+.+++++.++...|.+++.....
T Consensus 26 ~~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~~~ 105 (503)
T PLN02394 26 GKKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVF 105 (503)
T ss_pred cCcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcchH
Confidence 35567899999999999998774444578899999999999999999999999999999999999887788877643322
Q ss_pred ccccccc-CCccchhHHHHHHhhhh
Q 039142 109 IDTDSIY-NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 109 ~~~~~~~-~g~~~~~~~~w~~~r~~ 132 (137)
......+ .+++...|+.|+++|+.
T Consensus 106 ~~~~g~~~~~l~~~~g~~w~~~Rk~ 130 (503)
T PLN02394 106 DIFTGKGQDMVFTVYGDHWRKMRRI 130 (503)
T ss_pred hHhccCCCceeecCCCHHHHHHHHH
Confidence 1111112 34778889999999884
No 13
>PLN02500 cytochrome P450 90B1
Probab=99.65 E-value=6e-16 Score=114.04 Aligned_cols=102 Identities=21% Similarity=0.217 Sum_probs=78.3
Q ss_pred cCCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCC
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA 104 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~ 104 (137)
.++.+.||||+++|++||+..+. ...++.++.++.++||++|++++|++++++++||+++++++.+++..|+++..
T Consensus 34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~ 113 (490)
T PLN02500 34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYP 113 (490)
T ss_pred cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCc
Confidence 34456788999999999975431 13567788999999999999999999999999999999999988777765422
Q ss_pred cccccccccccC-CccchhHHHHHHhhhhc
Q 039142 105 LDGKIDTDSIYN-GFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 105 ~~~~~~~~~~~~-g~~~~~~~~w~~~r~~~ 133 (137)
... . ..++. |+...+|+.|+.+|+..
T Consensus 114 ~~~--~-~~~g~~~~~~~~g~~wr~~Rk~~ 140 (490)
T PLN02500 114 RSI--G-GILGKWSMLVLVGDMHRDMRSIS 140 (490)
T ss_pred hHH--H-HHhCcccccccCCHHHHHHHHHH
Confidence 111 1 22333 57777899999999853
No 14
>PLN02774 brassinosteroid-6-oxidase
Probab=99.65 E-value=2.9e-16 Score=115.01 Aligned_cols=101 Identities=16% Similarity=0.251 Sum_probs=79.1
Q ss_pred hcCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 28 SRNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 28 ~~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
++.+.+.||||+++|++||+..+ ..++..++.++.++||++|++++|+++.++++||+.+++++.++...|.++.. ..
T Consensus 26 ~~~r~~~ppgp~~~P~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~ 103 (463)
T PLN02774 26 RYSKKGLPPGTMGWPLFGETTEF-LKQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QS 103 (463)
T ss_pred ccCCCCCCCCCCCCCchhhHHHH-HHhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HH
Confidence 33455677899999999998776 45567788999999999999999999999999999999999887776644322 22
Q ss_pred ccccccccC-CccchhHHHHHHhhhh
Q 039142 108 KIDTDSIYN-GFKDNVRLMWERFLSC 132 (137)
Q Consensus 108 ~~~~~~~~~-g~~~~~~~~w~~~r~~ 132 (137)
.. ..++. |+...+|+.|+.+|+.
T Consensus 104 ~~--~~lg~~~~~~~~g~~w~~~R~~ 127 (463)
T PLN02774 104 ML--DILGTCNIAAVHGSTHRYMRGS 127 (463)
T ss_pred HH--HHhCccchhhcCCHHHHHHHHH
Confidence 21 23343 5777899999999974
No 15
>PLN02966 cytochrome P450 83A1
Probab=99.64 E-value=1.6e-15 Score=112.15 Aligned_cols=106 Identities=37% Similarity=0.544 Sum_probs=80.6
Q ss_pred hhcCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc
Q 039142 27 TSRNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD 106 (137)
Q Consensus 27 ~~~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~ 106 (137)
..++..+.||+|+++|++||+..+...++...+.++.++||+++++++|+.+.++++||+.+++++.++...|.+++...
T Consensus 23 ~~~~~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~ 102 (502)
T PLN02966 23 PKTKRYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHR 102 (502)
T ss_pred cccCCCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCc
Confidence 33445567899999999999988745568889999999999999999999999999999999999998887887766433
Q ss_pred cccccccccCC-ccchhHHHHHHhhhh
Q 039142 107 GKIDTDSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 107 ~~~~~~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
..........+ .+...|+.|+.+|+.
T Consensus 103 ~~~~~~~~~~~~~~~~~g~~w~~~R~~ 129 (502)
T PLN02966 103 GHEFISYGRRDMALNHYTPYYREIRKM 129 (502)
T ss_pred cceeeccCcceeeeCCCCHHHHHHHHH
Confidence 21111111111 245568889998875
No 16
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.64 E-value=2.4e-15 Score=109.86 Aligned_cols=105 Identities=29% Similarity=0.355 Sum_probs=79.8
Q ss_pred hhcCCCCCCCCCCCCccccccccCCCC-ChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCC--C
Q 039142 27 TSRNNTKLPPGPWGLPFIGNLHQFDVS-KPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSR--P 103 (137)
Q Consensus 27 ~~~~~~~~~p~p~~~p~~G~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~--~ 103 (137)
...+.++.+|+|+++|++||+..+... .......+...++|++++++.+.+|.++|+|||++++|+++++++|.+| +
T Consensus 25 ~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~ 104 (499)
T KOG0158|consen 25 YSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRP 104 (499)
T ss_pred hhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCC
Confidence 344555688999999999999887432 2344444444444999999999999999999999999999999999995 3
Q ss_pred CcccccccccccCCccchhHHHHHHhhhh
Q 039142 104 ALDGKIDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 104 ~~~~~~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
....... +....+++...|+.|++.|+.
T Consensus 105 ~~~d~~~-~l~~~~Lf~~~g~~WK~lR~~ 132 (499)
T KOG0158|consen 105 IYGDPED-PLSALNLFFLRGERWKRLRTK 132 (499)
T ss_pred CcCCCCC-cccccCchhccCchHHHHHHh
Confidence 3333211 232357999999999999874
No 17
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.63 E-value=1.3e-15 Score=112.50 Aligned_cols=102 Identities=29% Similarity=0.470 Sum_probs=85.9
Q ss_pred CCCCCCCCCCCccccccccCCCC--ChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVS--KPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
....+|||+++|++|++.++... +..+++.++..+||++|+.|+|+.+.++++||+.+++|+.++...+.+.+.....
T Consensus 33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~ 112 (497)
T KOG0157|consen 33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPES 112 (497)
T ss_pred HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHH
Confidence 55678999999999999888443 5667889999999999999999999999999999999998766666666666655
Q ss_pred cccccccCCccchhHHHHHHhhhhc
Q 039142 109 IDTDSIYNGFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 109 ~~~~~~~~g~~~~~~~~w~~~r~~~ 133 (137)
.. +.+|.|++..+|+.|..+|++.
T Consensus 113 ~~-~~lG~gll~~~g~~W~~~Rk~~ 136 (497)
T KOG0157|consen 113 LK-PWLGDGLLFSDGEKWHKHRKLL 136 (497)
T ss_pred HH-HHhcCccccCCchHHHHHHhhc
Confidence 55 7888998888899999988754
No 18
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.62 E-value=1.5e-15 Score=111.56 Aligned_cols=101 Identities=20% Similarity=0.253 Sum_probs=80.5
Q ss_pred cCCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCC
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA 104 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~ 104 (137)
..+.+.||+|.++|++||+..+. ..++..++.++.++||+++++++++++.++++||+.++++++++.+.|.++..
T Consensus 26 ~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~ 105 (472)
T PLN02987 26 YRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYP 105 (472)
T ss_pred cCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCc
Confidence 34445688999999999998762 24578888999999999999999999999999999999999998888866532
Q ss_pred ccccccccccc-CCccchhHHHHHHhhhh
Q 039142 105 LDGKIDTDSIY-NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 105 ~~~~~~~~~~~-~g~~~~~~~~w~~~r~~ 132 (137)
. .. . ..++ .|+...+|+.|+++|+.
T Consensus 106 ~-~~-~-~~lg~~~l~~~~g~~wr~~R~~ 131 (472)
T PLN02987 106 G-SI-S-NLLGKHSLLLMKGNLHKKMHSL 131 (472)
T ss_pred H-HH-H-HHhCcccccccCcHHHHHHHHH
Confidence 1 11 1 3334 47788899999999985
No 19
>PLN02655 ent-kaurene oxidase
Probab=99.60 E-value=3.3e-15 Score=109.59 Aligned_cols=95 Identities=26% Similarity=0.342 Sum_probs=77.0
Q ss_pred CCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccc
Q 039142 35 PPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSI 114 (137)
Q Consensus 35 ~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~ 114 (137)
||||+++|++||+.++..++++..+.++.++||++|++++|+.+.++++||+.+++++.++...|++++..... . ...
T Consensus 1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~-~-~~~ 78 (466)
T PLN02655 1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL-T-VLT 78 (466)
T ss_pred CcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH-H-HHh
Confidence 58999999999998885566889999999999999999999999999999999999999988899887654332 1 122
Q ss_pred cCC--ccch-hHHHHHHhhh
Q 039142 115 YNG--FKDN-VRLMWERFLS 131 (137)
Q Consensus 115 ~~g--~~~~-~~~~w~~~r~ 131 (137)
+.+ +... .|+.|+.+|+
T Consensus 79 ~~~~~~~~~~~g~~wr~~Rr 98 (466)
T PLN02655 79 RDKSMVATSDYGDFHKMVKR 98 (466)
T ss_pred cCCCceeeCCCcHHHHHHHH
Confidence 222 4443 4899998875
No 20
>PLN03018 homomethionine N-hydroxylase
Probab=99.59 E-value=2.1e-14 Score=106.89 Aligned_cols=101 Identities=20% Similarity=0.394 Sum_probs=73.9
Q ss_pred CCCCCCCCCccccccccCCCCCh-HHHHHHHHHhc-CCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc
Q 039142 33 KLPPGPWGLPFIGNLHQFDVSKP-QVSFWELSRKY-GPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID 110 (137)
Q Consensus 33 ~~~p~p~~~p~~G~~~~~~~~~~-~~~~~~~~~~~-g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~ 110 (137)
+.||||+++|++||+..+....+ .....+..++| |++|++++|+++.++++||+.++++|.+++..|++|+.......
T Consensus 40 ~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~ 119 (534)
T PLN03018 40 QLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMET 119 (534)
T ss_pred CCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhh
Confidence 46889999999999988733322 23455556665 79999999999999999999999999998888999876544321
Q ss_pred cccccCCcc-chhHHHHHHhhhhc
Q 039142 111 TDSIYNGFK-DNVRLMWERFLSCQ 133 (137)
Q Consensus 111 ~~~~~~g~~-~~~~~~w~~~r~~~ 133 (137)
....+.++. +..|+.|+.+|+.-
T Consensus 120 l~~~~~~i~~~~~G~~Wk~~Rk~l 143 (534)
T PLN03018 120 IGDNYKSMGTSPYGEQFMKMKKVI 143 (534)
T ss_pred hccCCCceEecCCCHHHHHHHHHH
Confidence 111112333 34599999999853
No 21
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.53 E-value=2e-14 Score=105.03 Aligned_cols=100 Identities=19% Similarity=0.283 Sum_probs=79.9
Q ss_pred CCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL 105 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~ 105 (137)
++.+.||||+++|++||+..+. ..+++.++.++.++||++|++++|+.+.++++||+++++++.+++..|..+...
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~ 83 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK 83 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence 4556788999999999998763 246888999999999999999999999999999999999999888777655321
Q ss_pred cccccccccc-CCccchhHHHHHHhhhh
Q 039142 106 DGKIDTDSIY-NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 106 ~~~~~~~~~~-~g~~~~~~~~w~~~r~~ 132 (137)
. .. ..++ .|++..+|+.|+++|+.
T Consensus 84 -~-~~-~l~g~~~~~~~~g~~wr~~r~~ 108 (452)
T PLN03141 84 -S-LT-ELMGKSSILLINGSLQRRVHGL 108 (452)
T ss_pred -h-HH-HHhCcccccccCcHHHHHHHHH
Confidence 1 11 2333 35788899999999874
No 22
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.51 E-value=2.5e-13 Score=100.08 Aligned_cols=101 Identities=22% Similarity=0.300 Sum_probs=75.9
Q ss_pred hcCCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCC--eEEEeeCCcCEEEEeCHHHHHHHHHhccccccC
Q 039142 28 SRNNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGP--LMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 28 ~~~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~--~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
.....+.||||+++|++|++..+. ..+++.++.++.++||+ ++++++++.+.++++||+.+++++.++ +.|.+
T Consensus 37 ~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~ 115 (490)
T PLN02302 37 GEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEP 115 (490)
T ss_pred ccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-Ccccc
Confidence 334456789999999999987652 34678889999999996 789999999999999999999999865 45654
Q ss_pred CCCcccccccccccC-CccchhHHHHHHhhhh
Q 039142 102 RPALDGKIDTDSIYN-GFKDNVRLMWERFLSC 132 (137)
Q Consensus 102 ~~~~~~~~~~~~~~~-g~~~~~~~~w~~~r~~ 132 (137)
+...... ..++. +....+|+.|+++|+.
T Consensus 116 ~~~~~~~---~~~g~~~~~~~~g~~w~~~R~~ 144 (490)
T PLN02302 116 GWPESTV---ELIGRKSFVGITGEEHKRLRRL 144 (490)
T ss_pred CCchhHH---HHhccccccccCcHHHHHHHHH
Confidence 4322111 22333 3556789999999884
No 23
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.48 E-value=3.6e-13 Score=99.70 Aligned_cols=101 Identities=16% Similarity=0.079 Sum_probs=76.0
Q ss_pred CCCCCCCCCCCccccccccCCCC--ChHHHHHHHHHhcCCeEE---EeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVS--KPQVSFWELSRKYGPLMS---LRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL 105 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~--~~~~~~~~~~~~~g~~~~---~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~ 105 (137)
+++..|+|+++|++||+..+..+ ...+++.+..++||..+. .|+|+.+.++++||+++++||.++...|++++..
T Consensus 29 ~~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~~ 108 (500)
T PLN02169 29 KPHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPEF 108 (500)
T ss_pred ccCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHHH
Confidence 34467999999999998765322 234555555566886655 6889999999999999999999988788776543
Q ss_pred ccccccccccCCccchhHHHHHHhhhhc
Q 039142 106 DGKIDTDSIYNGFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 106 ~~~~~~~~~~~g~~~~~~~~w~~~r~~~ 133 (137)
... . +.++.|++.++|+.|+.+|+..
T Consensus 109 ~~~-~-~~~g~gl~~~~g~~Wr~~Rk~l 134 (500)
T PLN02169 109 KKI-F-DVLGEGILTVDFELWEDLRKSN 134 (500)
T ss_pred HHH-H-HhhcCcccccCcHHHHHHHHHH
Confidence 322 2 4567899999999999999853
No 24
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.46 E-value=3.4e-14 Score=102.55 Aligned_cols=98 Identities=36% Similarity=0.471 Sum_probs=80.6
Q ss_pred CCCCCCCccccccccCCC-CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc--c
Q 039142 35 PPGPWGLPFIGNLHQFDV-SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID--T 111 (137)
Q Consensus 35 ~p~p~~~p~~G~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~--~ 111 (137)
||||+++|++||+..+.. .+++..+.++.++||++|++++++++.++++||+.+++++.++...+..++....... .
T Consensus 1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~~ 80 (463)
T PF00067_consen 1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFRG 80 (463)
T ss_dssp SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHHH
T ss_pred CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhccccccccccccccccccccccccc
Confidence 689999999999999853 6678889999999999999999999999999999999999998777766543222221 1
Q ss_pred ccccCCccchhHHHHHHhhhh
Q 039142 112 DSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~~g~~~~~~~~w~~~r~~ 132 (137)
...+.|++...++.|+.+|+.
T Consensus 81 ~~~~~~l~~~~~~~~~~~R~~ 101 (463)
T PF00067_consen 81 PFGGKGLFFSDGERWRRQRRL 101 (463)
T ss_dssp HHTTTSSTTSSHHHHHHHHHH
T ss_pred ccccccccccccccccccccc
Confidence 345568888999999998874
No 25
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.44 E-value=5.3e-13 Score=99.10 Aligned_cols=96 Identities=13% Similarity=0.175 Sum_probs=71.4
Q ss_pred CCCCCCCCccccccccCCCCChHHHHHHHHHhc---CCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc
Q 039142 34 LPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKY---GPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID 110 (137)
Q Consensus 34 ~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~ 110 (137)
.+|||+++|++||+..+.. + +..+.++.++| |+++.+++|+.+.++++||+.+++++.++...|.+++.......
T Consensus 31 ~~pgp~~~p~~G~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~ 108 (516)
T PLN03195 31 NRKGPKSWPIIGAALEQLK-N-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYME 108 (516)
T ss_pred ccCCCCCCCeecchHHHHh-c-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHHH
Confidence 4689999999999865522 2 23455666666 79999999999999999999999999876556765543222211
Q ss_pred cccccCCccchhHHHHHHhhhh
Q 039142 111 TDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 111 ~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
...+.|++..+|+.|+.+|+.
T Consensus 109 -~~~g~~l~~~~g~~w~~~Rr~ 129 (516)
T PLN03195 109 -VLLGDGIFNVDGELWRKQRKT 129 (516)
T ss_pred -HHhcCeeeccCcHHHHHHHHh
Confidence 234567888899999999984
No 26
>PLN02936 epsilon-ring hydroxylase
Probab=99.15 E-value=8.3e-11 Score=87.00 Aligned_cols=98 Identities=17% Similarity=0.194 Sum_probs=77.7
Q ss_pred CCCCCCCCccccccccCC----CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 34 LPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 34 ~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
.-.|..+||++|+..+.. ...++..+.++.++||+++++++|+.+.++++||+++++++++++..|.+++.... .
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~-~ 91 (489)
T PLN02936 13 LWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEV-S 91 (489)
T ss_pred cCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhh-h
Confidence 335667899999987653 35577889999999999999999999999999999999999887778877653222 1
Q ss_pred ccccccCCccchhHHHHHHhhhhc
Q 039142 110 DTDSIYNGFKDNVRLMWERFLSCQ 133 (137)
Q Consensus 110 ~~~~~~~g~~~~~~~~w~~~r~~~ 133 (137)
. ...+.|++..+|+.|+.+|+.-
T Consensus 92 ~-~~~~~~i~~~~g~~wk~~Rk~l 114 (489)
T PLN02936 92 E-FLFGSGFAIAEGELWTARRRAV 114 (489)
T ss_pred H-HHhcCccccCCchHHHHHHHhh
Confidence 1 2345677888999999999843
No 27
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.14 E-value=1.2e-10 Score=84.88 Aligned_cols=102 Identities=25% Similarity=0.362 Sum_probs=81.7
Q ss_pred CCCCCCCCCCCCcccccccc---CCCCChHHHHHHHHHhcCCeEEEe-eCCcCEEEEeCHHHHHHHHHhccccccCCC-C
Q 039142 30 NNTKLPPGPWGLPFIGNLHQ---FDVSKPQVSFWELSRKYGPLMSLR-LGFVPSLVVSSAKLAKEILKTHDLQFCSRP-A 104 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~---~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~-~ 104 (137)
.+...+|+|+++|++|.+.. -...+.++......++||++|... +|+...|.+.+|+.+++++.+++ .++.|| .
T Consensus 47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG-~~P~Rp~~ 125 (519)
T KOG0159|consen 47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEG-KYPFRPLL 125 (519)
T ss_pred CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCC-CCCCcccc
Confidence 33456799999999999983 334678899999999999999999 78899999999999999998876 568886 3
Q ss_pred ccccccc---ccccCCccchhHHHHHHhhhh
Q 039142 105 LDGKIDT---DSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 105 ~~~~~~~---~~~~~g~~~~~~~~w~~~r~~ 132 (137)
.+.+... .....|++..+|..|.+.|+.
T Consensus 126 ~~~w~~~rd~~~~~~Gl~~~~G~~W~~~Rs~ 156 (519)
T KOG0159|consen 126 IEPWVAYRDFRGGVCGLFLLEGPEWQRLRSA 156 (519)
T ss_pred cchhhhhHHhhccCCCcccCCCHHHHHHHHH
Confidence 3333333 233358999999999999984
No 28
>PLN02738 carotene beta-ring hydroxylase
Probab=99.00 E-value=1.4e-09 Score=82.75 Aligned_cols=86 Identities=19% Similarity=0.279 Sum_probs=66.1
Q ss_pred cccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHH
Q 039142 45 GNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRL 124 (137)
Q Consensus 45 G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 124 (137)
||+..+.....+..+.++.++||+++++++|+.+.++++||+.+++++.++...|.+++.... .. ...+.|++..+++
T Consensus 143 G~l~~i~~g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~-~~-~~~g~~l~~~dge 220 (633)
T PLN02738 143 GSISAVRGEAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEI-LE-FVMGKGLIPADGE 220 (633)
T ss_pred CcHHHhcCchHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHH-Hh-hccCCceecCCcH
Confidence 554445345567888999999999999999999999999999999999987767766543211 11 2334577888999
Q ss_pred HHHHhhhh
Q 039142 125 MWERFLSC 132 (137)
Q Consensus 125 ~w~~~r~~ 132 (137)
.|+.+|+.
T Consensus 221 ~wr~rRr~ 228 (633)
T PLN02738 221 IWRVRRRA 228 (633)
T ss_pred HHHHHHHh
Confidence 99998874
No 29
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.96 E-value=5.7e-09 Score=75.10 Aligned_cols=66 Identities=21% Similarity=0.261 Sum_probs=58.8
Q ss_pred CCCCCCCC-CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccc
Q 039142 33 KLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQF 99 (137)
Q Consensus 33 ~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~ 99 (137)
..||.-.+ .|++|+...+ ++++.+++.+.+++||++|++.++++.+.++.+|+....++.+.....
T Consensus 31 ~~PPli~gwiP~lG~a~~f-gk~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~l 97 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAF-GKDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADL 97 (486)
T ss_pred CCCcccccCcchhhHHHHh-ccCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCccccc
Confidence 56777665 6999999999 999999999999999999999999999999999999999998764333
No 30
>PLN02648 allene oxide synthase
Probab=98.93 E-value=6.8e-10 Score=81.99 Aligned_cols=97 Identities=15% Similarity=0.198 Sum_probs=71.5
Q ss_pred CCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCC-eEEEeeCCcCE-------EEEeCHHHHHHHHHh----c
Q 039142 32 TKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGP-LMSLRLGFVPS-------LVVSSAKLAKEILKT----H 95 (137)
Q Consensus 32 ~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~-~~~~~~g~~~~-------i~v~~p~~i~~vl~~----~ 95 (137)
.+.|||+.++|++|++.++. ..++..++.+..++||+ +|+..+++.|+ ++++||+.++.+|.+ +
T Consensus 16 ~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~ 95 (480)
T PLN02648 16 LREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK 95 (480)
T ss_pred CCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence 35688999999999997642 34557899999999998 99999988666 999999999999975 3
Q ss_pred cccccCCCCccccccccccc-C---CccchhHHHHHHhhhh
Q 039142 96 DLQFCSRPALDGKIDTDSIY-N---GFKDNVRLMWERFLSC 132 (137)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~-~---g~~~~~~~~w~~~r~~ 132 (137)
...+..... .. . ..+| . ++....|+.|+++|+.
T Consensus 96 ~~~~~~~~~-~~--~-~l~G~~~~~s~~~~~g~~H~r~Rrl 132 (480)
T PLN02648 96 RDVFTGTYM-PS--T-AFTGGYRVLSYLDPSEPKHAKLKSF 132 (480)
T ss_pred cccceeeec-cC--c-cccCCceeeeecCCCCchHHHHHHH
Confidence 333332211 11 1 2344 3 5677889999988874
No 31
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=98.80 E-value=5.8e-08 Score=72.29 Aligned_cols=89 Identities=9% Similarity=-0.010 Sum_probs=65.6
Q ss_pred CccccccccCCCCChHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCcc
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFK 119 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~ 119 (137)
.++.|+.... ..+..+++.++.++++ .+++++.++. ++++||+.+++++.++...|.++........ +.++.|++
T Consensus 49 ~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~-~~~g~gi~ 124 (502)
T PLN02426 49 AYLTASWAKD-FDNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILG-DLLGRGIF 124 (502)
T ss_pred CCccHHHHHh-cccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHH-HhcCCcee
Confidence 5577887654 3446777777778887 5777776554 8999999999999988778876544333222 45678999
Q ss_pred chhHHHHHHhhhhc
Q 039142 120 DNVRLMWERFLSCQ 133 (137)
Q Consensus 120 ~~~~~~w~~~r~~~ 133 (137)
+.+|+.|+.+|+.-
T Consensus 125 ~~~g~~wk~~Rk~l 138 (502)
T PLN02426 125 NVDGDSWRFQRKMA 138 (502)
T ss_pred ecCcHHHHHHHHHh
Confidence 99999999999854
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.63 E-value=0.15 Score=37.44 Aligned_cols=77 Identities=17% Similarity=0.100 Sum_probs=49.6
Q ss_pred hHHHHHHHHHhcCCeEEEeeCCcC--EEEEeCHHHHHHHHHhcc--ccccCCCCcccccccccccCC-ccchhHHHHHHh
Q 039142 55 PQVSFWELSRKYGPLMSLRLGFVP--SLVVSSAKLAKEILKTHD--LQFCSRPALDGKIDTDSIYNG-FKDNVRLMWERF 129 (137)
Q Consensus 55 ~~~~~~~~~~~~g~~~~~~~g~~~--~i~v~~p~~i~~vl~~~~--~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~w~~~ 129 (137)
+........+.||.++..+..+.. .+++++++.+++++.++. .............. ..++.+ +...++..|.++
T Consensus 24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ll~~dg~~H~r~ 102 (411)
T COG2124 24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLR-PVLGDGSLLTLDGPEHTRL 102 (411)
T ss_pred hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchh-hhccccceeecCCHHHHHH
Confidence 334455667778888887765543 899999999999998763 22211111111111 444555 788999999998
Q ss_pred hhh
Q 039142 130 LSC 132 (137)
Q Consensus 130 r~~ 132 (137)
|+.
T Consensus 103 Rkl 105 (411)
T COG2124 103 RKL 105 (411)
T ss_pred HHH
Confidence 874
No 33
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=53.64 E-value=36 Score=20.68 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=30.1
Q ss_pred ChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhc
Q 039142 54 KPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTH 95 (137)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~ 95 (137)
+....+.+|.++||.+--.. +...+...|++.+++++...
T Consensus 75 ~v~~~i~~w~~~~g~v~l~~--~~~~l~~~d~~~l~~l~~~~ 114 (129)
T PF13625_consen 75 NVEQSIEDWARRYGRVRLYK--GAYLLECDDPELLDELLADP 114 (129)
T ss_pred HHHHHHHHHHHhcCCEEEec--CeEEEEECCHHHHHHHHhCh
Confidence 34567899999999875422 35677789999999998653
No 34
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=51.80 E-value=51 Score=19.77 Aligned_cols=60 Identities=25% Similarity=0.370 Sum_probs=39.5
Q ss_pred CCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCc------CEEEEeCHHHHHHHHHh
Q 039142 32 TKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFV------PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 32 ~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~------~~i~v~~p~~i~~vl~~ 94 (137)
.+.+|-...+-++-|++ .+-..+.+-++..+||.+-++++|.+ ..+|-.|-..++..+.+
T Consensus 11 ~rlppevnriLyirNLp---~~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 11 IRLPPEVNRILYIRNLP---FKITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred CCCChhhheeEEEecCC---ccccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 34444444555666654 23334566677889999999999864 45666777777777754
No 35
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=49.60 E-value=45 Score=18.50 Aligned_cols=6 Identities=33% Similarity=0.495 Sum_probs=2.3
Q ss_pred HHHHHH
Q 039142 88 AKEILK 93 (137)
Q Consensus 88 i~~vl~ 93 (137)
++.|+.
T Consensus 61 LE~ILd 66 (75)
T TIGR02976 61 LERILD 66 (75)
T ss_pred HHHHHc
Confidence 333333
No 36
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=46.91 E-value=47 Score=17.97 Aligned_cols=18 Identities=11% Similarity=0.200 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 039142 5 IIINFLLCLPFFLFFFAL 22 (137)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (137)
+++.+|++++++++|-.+
T Consensus 6 iLi~ICVaii~lIlY~iY 23 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455566666666666444
No 37
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=43.87 E-value=1.5e+02 Score=22.95 Aligned_cols=36 Identities=11% Similarity=0.158 Sum_probs=19.1
Q ss_pred HHhcCCeEEEeeCCcCEEE-EeCHHHHHHHHHhccccc
Q 039142 63 SRKYGPLMSLRLGFVPSLV-VSSAKLAKEILKTHDLQF 99 (137)
Q Consensus 63 ~~~~g~~~~~~~g~~~~i~-v~~p~~i~~vl~~~~~~~ 99 (137)
..+||.+++-.+-++.+-| +..++. ++-++++...|
T Consensus 220 ~Grfg~V~KaqL~~~~VAVKifp~~~-kqs~~~Ek~Iy 256 (534)
T KOG3653|consen 220 RGRFGCVWKAQLDNRLVAVKIFPEQE-KQSFQNEKNIY 256 (534)
T ss_pred cCccceeehhhccCceeEEEecCHHH-HHHHHhHHHHH
Confidence 4567888877666654444 443333 33343443444
No 38
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=43.49 E-value=71 Score=19.03 Aligned_cols=11 Identities=36% Similarity=0.389 Sum_probs=8.6
Q ss_pred CCccccccccC
Q 039142 40 GLPFIGNLHQF 50 (137)
Q Consensus 40 ~~p~~G~~~~~ 50 (137)
.-|+.||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 46899998765
No 39
>PRK09458 pspB phage shock protein B; Provisional
Probab=41.30 E-value=64 Score=17.92 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=6.3
Q ss_pred HHHHHHHHhccccc
Q 039142 86 KLAKEILKTHDLQF 99 (137)
Q Consensus 86 ~~i~~vl~~~~~~~ 99 (137)
++++.++.++++++
T Consensus 59 ~tLE~ILDae~P~W 72 (75)
T PRK09458 59 QALEAILDAEHPNW 72 (75)
T ss_pred HHHHHHHcccCCCc
Confidence 34455554444333
No 40
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=39.57 E-value=69 Score=17.78 Aligned_cols=9 Identities=22% Similarity=0.320 Sum_probs=3.6
Q ss_pred HHHHHHHhc
Q 039142 87 LAKEILKTH 95 (137)
Q Consensus 87 ~i~~vl~~~ 95 (137)
+++.++..+
T Consensus 60 tLE~ILdae 68 (75)
T PF06667_consen 60 TLERILDAE 68 (75)
T ss_pred HHHHHHcCC
Confidence 344444333
No 41
>PHA03049 IMV membrane protein; Provisional
Probab=37.88 E-value=69 Score=17.29 Aligned_cols=18 Identities=6% Similarity=0.139 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 039142 5 IIINFLLCLPFFLFFFAL 22 (137)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~ 22 (137)
+++.+|++++.+++|-.+
T Consensus 6 ~l~iICVaIi~lIvYgiY 23 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIY 23 (68)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344555655555555444
No 42
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=36.16 E-value=1e+02 Score=20.38 Aligned_cols=47 Identities=21% Similarity=0.321 Sum_probs=30.4
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeCC----cCEEEEeCHHHHHHHH
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF----VPSLVVSSAKLAKEIL 92 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~----~~~i~v~~p~~i~~vl 92 (137)
.+||+..- .-...++....+||++..+|+.. -..|-.-||..+.+..
T Consensus 14 YVGnL~~~---a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~DAv 64 (195)
T KOG0107|consen 14 YVGNLGSR---ATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAEDAV 64 (195)
T ss_pred EeccCCCC---cchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHHHHH
Confidence 56777533 23345677888999999999733 2344456666666554
No 43
>PF08675 RNA_bind: RNA binding domain; InterPro: IPR014789 This domain corresponds to the RNA binding domain of Poly(A)-specific ribonuclease (PARN). ; GO: 0003723 RNA binding, 0004535 poly(A)-specific ribonuclease activity, 0046872 metal ion binding, 0006402 mRNA catabolic process, 0005634 nucleus, 0005737 cytoplasm; PDB: 3CTR_A 2ROK_A 3D45_B 1WHV_A.
Probab=31.41 E-value=1.1e+02 Score=17.56 Aligned_cols=40 Identities=13% Similarity=0.229 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhcCCeEEEeeCCc-CEEEEeCHHHHHHHHHh
Q 039142 55 PQVSFWELSRKYGPLMSLRLGFV-PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 55 ~~~~~~~~~~~~g~~~~~~~g~~-~~i~v~~p~~i~~vl~~ 94 (137)
...-+.++...||.+.-.|+..+ ..|.+.+.+.++.++..
T Consensus 21 K~~DI~qlFspfG~I~VsWi~dTSAfV~l~~r~~~~~v~~~ 61 (87)
T PF08675_consen 21 KTSDIYQLFSPFGQIYVSWINDTSAFVALHNRDQAKVVMNT 61 (87)
T ss_dssp -HHHHHHHCCCCCCEEEEEECTTEEEEEECCCHHHHHHHHH
T ss_pred hhhhHHHHhccCCcEEEEEEcCCcEEEEeecHHHHHHHHHH
Confidence 34556667778899999999885 66668999999988755
No 44
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=30.08 E-value=96 Score=20.05 Aligned_cols=7 Identities=0% Similarity=0.363 Sum_probs=2.6
Q ss_pred HHHHHHH
Q 039142 16 FLFFFAL 22 (137)
Q Consensus 16 ~~~~~~~ 22 (137)
.++++.+
T Consensus 111 yfvir~~ 117 (163)
T PF06679_consen 111 YFVIRTF 117 (163)
T ss_pred HHHHHHH
Confidence 3333333
No 45
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=29.93 E-value=79 Score=15.58 Aligned_cols=35 Identities=14% Similarity=0.246 Sum_probs=24.1
Q ss_pred HHHHHhcCCeEEEeeCCc----CEEEEeCHHHHHHHHHh
Q 039142 60 WELSRKYGPLMSLRLGFV----PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 60 ~~~~~~~g~~~~~~~g~~----~~i~v~~p~~i~~vl~~ 94 (137)
.+...+||++-.+.+... -.|--.+++.++.....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~~ 40 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIEQ 40 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 356788999988876543 34446788888888764
No 46
>PF15102 TMEM154: TMEM154 protein family
Probab=29.04 E-value=23 Score=22.35 Aligned_cols=6 Identities=0% Similarity=-0.207 Sum_probs=2.4
Q ss_pred HHHHHH
Q 039142 59 FWELSR 64 (137)
Q Consensus 59 ~~~~~~ 64 (137)
+.+|..
T Consensus 130 ldkwm~ 135 (146)
T PF15102_consen 130 LDKWMN 135 (146)
T ss_pred HHhHHH
Confidence 344433
No 47
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=27.27 E-value=2.3e+02 Score=20.14 Aligned_cols=58 Identities=14% Similarity=0.252 Sum_probs=37.7
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCc---------CEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFV---------PSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~---------~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
-++||+.. .--.+.+.+...+||++..+.+... -.|.-.+++.+...+.+ ++..+.+|
T Consensus 272 lfV~NL~~---~~~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr 339 (352)
T TIGR01661 272 IFVYNLSP---DTDETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNR 339 (352)
T ss_pred EEEeCCCC---CCCHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 35566653 2344567777889999987776432 25666788888888765 55555554
No 48
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.12 E-value=1.4e+02 Score=16.39 Aligned_cols=7 Identities=43% Similarity=0.700 Sum_probs=3.1
Q ss_pred ChHHHHH
Q 039142 1 MALLIII 7 (137)
Q Consensus 1 m~~~~~~ 7 (137)
|++++.+
T Consensus 1 m~l~lai 7 (71)
T COG3763 1 MSLWLAI 7 (71)
T ss_pred ChhHHHH
Confidence 4444433
No 49
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=23.40 E-value=1.5e+02 Score=23.31 Aligned_cols=19 Identities=16% Similarity=0.386 Sum_probs=12.6
Q ss_pred CChHHHHHHHHHhcCCeEE
Q 039142 53 SKPQVSFWELSRKYGPLMS 71 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~ 71 (137)
......+..|.++|-++..
T Consensus 60 Ges~~~f~~w~~~~~~i~~ 78 (569)
T PRK04778 60 GQSEEKFEEWRQKWDEIVT 78 (569)
T ss_pred cccHHHHHHHHHHHHHHHH
Confidence 4455677888888766543
No 50
>PF14316 DUF4381: Domain of unknown function (DUF4381)
Probab=23.00 E-value=1.9e+02 Score=18.03 Aligned_cols=11 Identities=18% Similarity=0.138 Sum_probs=4.5
Q ss_pred CHHHHHHHHHh
Q 039142 84 SAKLAKEILKT 94 (137)
Q Consensus 84 ~p~~i~~vl~~ 94 (137)
+.+.--+.|.+
T Consensus 94 ~G~~W~~fL~~ 104 (146)
T PF14316_consen 94 SGQAWLQFLDQ 104 (146)
T ss_pred CHHHHHHHHHH
Confidence 33444444433
No 51
>PF07423 DUF1510: Protein of unknown function (DUF1510); InterPro: IPR009988 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown.
Probab=20.64 E-value=1e+02 Score=20.99 Aligned_cols=8 Identities=13% Similarity=0.518 Sum_probs=3.1
Q ss_pred hHHHHHHh
Q 039142 122 VRLMWERF 129 (137)
Q Consensus 122 ~~~~w~~~ 129 (137)
...+|..+
T Consensus 148 ~S~DW~Em 155 (217)
T PF07423_consen 148 GSVDWNEM 155 (217)
T ss_pred CCcCHHHH
Confidence 33344433
Done!