Query 039142
Match_columns 137
No_of_seqs 108 out of 1115
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 10:59:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039142.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039142hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tbg_A Cytochrome P450 2D6; mo 99.8 4.9E-19 1.7E-23 128.0 10.2 103 30-132 7-112 (479)
2 3e6i_A CYPIIE1, P450-J, cytoch 99.7 5.4E-17 1.9E-21 117.3 9.1 101 30-132 7-107 (476)
3 3swz_A Steroid 17-alpha-hydrox 99.7 3.7E-17 1.3E-21 118.9 7.9 104 30-133 5-110 (494)
4 3nxu_A Cytochrome P450 3A4; al 99.7 3.6E-17 1.2E-21 118.6 7.3 99 30-132 11-110 (485)
5 3pm0_A Cypib1, cytochrome P450 99.7 5.2E-17 1.8E-21 118.2 7.5 101 30-132 6-107 (507)
6 1po5_A Cytochrome P450 2B4; ox 99.6 1.2E-15 4.1E-20 110.6 9.8 100 31-131 8-107 (476)
7 3s79_A Cytochrome P450 19A1; o 99.6 3.5E-16 1.2E-20 113.8 6.2 100 31-132 43-147 (503)
8 3qz1_A Steroid 21-hydroxylase; 99.6 8.8E-16 3E-20 111.5 6.8 97 29-132 25-123 (496)
9 1r9o_A Cytochrome P450 2C9; mo 99.6 1.8E-15 6.3E-20 109.6 7.4 98 33-131 11-108 (477)
10 2fdv_A Cytochrome P450 2A6; CY 99.6 3.6E-15 1.2E-19 108.1 8.2 100 32-132 9-108 (476)
11 3ld6_A Lanosterol 14-alpha dem 99.6 5.4E-16 1.9E-20 112.0 3.8 98 33-132 11-110 (461)
12 2hi4_A Cytochrome P450 1A2; CY 99.6 3.9E-15 1.3E-19 108.4 8.2 99 32-132 15-115 (495)
13 3k9v_A 1,25-dihydroxyvitamin D 99.6 2.1E-15 7.1E-20 109.1 6.2 103 29-132 20-129 (482)
14 3i3k_A Lanosterol 14-alpha dem 99.5 2.8E-15 9.5E-20 108.2 3.9 101 30-132 8-110 (461)
15 3gw9_A Sterol 14alpha-demethyl 99.5 6.5E-15 2.2E-19 105.7 4.5 98 32-132 2-102 (450)
16 3czh_A Cytochrome P450 2R1; vi 99.5 1.8E-14 6.1E-19 104.7 6.2 102 30-132 9-113 (481)
17 3b6h_A Prostacyclin synthase; 99.4 5E-14 1.7E-18 102.5 3.2 100 29-130 14-114 (498)
18 3v8d_A Cholesterol 7-alpha-mon 99.4 3.2E-14 1.1E-18 103.4 1.9 102 27-131 7-110 (491)
19 3dbg_A Putative cytochrome P45 99.4 1.1E-13 3.9E-18 100.0 3.7 96 32-132 22-118 (467)
20 2cib_A Cytochrome P450 51; hem 99.4 4.5E-13 1.5E-17 96.7 6.7 96 33-132 4-100 (455)
21 2ve3_A Putative cytochrome P45 99.4 2.4E-13 8.4E-18 97.8 4.2 99 29-132 8-107 (444)
22 3n9y_A Cholesterol SIDE-chain 99.4 3.3E-13 1.1E-17 97.8 4.8 103 28-132 4-113 (487)
23 3dax_A Cytochrome P450 7A1; ch 99.4 7.9E-14 2.7E-18 101.1 1.3 99 30-131 10-110 (491)
24 2ij2_A Cytochrome P450 BM3; mo 99.4 1.3E-12 4.4E-17 94.7 7.3 97 33-132 3-102 (470)
25 2cd8_A Cytochrome P450 monooxy 99.3 4.4E-13 1.5E-17 96.5 4.0 99 31-132 24-126 (436)
26 3b98_A Prostaglandin I2 syntha 99.3 3.8E-13 1.3E-17 97.2 2.1 98 29-129 14-112 (475)
27 1n97_A CYP175A1; electron tran 99.2 2.4E-12 8.1E-17 91.3 1.2 92 36-132 2-93 (389)
28 1jfb_A Nitric-oxide reductase 99.0 8.2E-10 2.8E-14 78.5 7.0 94 34-132 2-101 (404)
29 1ued_A P450 OXYC, P450 monooxy 99.0 1.1E-09 3.9E-14 78.0 6.3 94 31-132 8-111 (406)
30 3awm_A Fatty acid alpha-hydrox 99.0 5.5E-10 1.9E-14 79.7 4.5 89 41-132 7-97 (415)
31 1izo_A P450bsbeta, cytochrome 98.9 6.2E-10 2.1E-14 79.5 3.9 91 39-132 6-98 (417)
32 3dsk_A Cytochrome P450 74A, ch 98.9 8.7E-10 3E-14 80.1 4.1 99 29-132 24-143 (495)
33 2zbx_A Cytochrome P450-SU1; be 98.9 8.1E-09 2.8E-13 73.7 8.0 96 33-132 5-109 (412)
34 1s1f_A Putative cytochrome P45 98.8 1E-08 3.5E-13 73.1 7.3 94 32-132 7-107 (406)
35 3mdm_A Cholesterol 24-hydroxyl 98.8 1.1E-08 3.9E-13 73.5 5.9 79 52-132 9-92 (456)
36 2zwu_A Camphor 5-monooxygenase 98.7 2.6E-08 8.8E-13 71.3 6.8 99 29-132 7-115 (415)
37 3oo3_A OXY protein; cytochrome 98.7 1.3E-08 4.3E-13 71.9 5.0 79 52-132 11-93 (384)
38 3abb_A CYP105D6, cytochrome P4 98.7 3.4E-08 1.2E-12 70.4 6.8 78 52-132 23-108 (408)
39 3ivy_A Cytochrome P450 CYP125; 98.7 5.8E-08 2E-12 69.8 7.3 97 33-132 18-130 (433)
40 4fb2_A P450CIN; heme, monooxyg 98.6 4.3E-08 1.5E-12 69.6 5.8 79 52-132 18-98 (398)
41 1cpt_A Cytochrome P450-TERP; o 98.6 3.9E-08 1.3E-12 70.5 4.8 95 31-132 4-116 (428)
42 3aba_A Cytochrome P450; oxidor 98.6 9.6E-08 3.3E-12 68.0 6.7 78 52-132 18-101 (403)
43 3ejb_B Biotin biosynthesis cyt 98.6 1E-07 3.5E-12 67.7 6.2 78 53-132 13-94 (404)
44 1z8o_A 6-deoxyerythronolide B 98.6 1.6E-07 5.3E-12 66.9 7.0 78 52-132 13-104 (404)
45 3a4g_A Vitamin D hydroxylase; 98.6 1.3E-07 4.3E-12 67.6 6.5 78 52-132 19-101 (411)
46 2jjn_A Cytochrome P450 113A1; 98.5 1.6E-07 5.5E-12 67.0 6.0 86 30-132 16-101 (411)
47 2y5n_A MYCG, P-450-like protei 98.5 1.7E-07 5.8E-12 67.1 5.7 78 52-132 36-117 (417)
48 3dan_A Cytochrome P450 74A2; A 98.5 8.9E-08 3E-12 69.0 3.8 51 30-80 6-62 (473)
49 3oft_A Cytochrome P450, CYP101 98.5 4.5E-07 1.5E-11 64.2 7.0 78 52-132 23-100 (396)
50 3tyw_A Putative cytochrome P45 98.4 7.3E-07 2.5E-11 63.7 7.6 78 52-132 28-113 (417)
51 3lxh_A Cytochrome P450; heme, 98.4 7.8E-07 2.7E-11 63.6 7.7 78 53-132 38-116 (421)
52 1odo_A Putative cytochrome P45 98.4 3.2E-07 1.1E-11 65.3 5.6 78 52-132 14-101 (408)
53 2xbk_A PIMD protein; epoxidati 98.4 4.2E-07 1.4E-11 64.8 5.8 78 52-132 25-111 (404)
54 2z36_A MOXA, cytochrome P450 t 98.4 5.4E-07 1.8E-11 64.4 6.4 78 52-132 21-109 (413)
55 1gwi_A CYP154C1, cytochrome P4 98.3 2.1E-06 7.1E-11 61.3 7.1 78 52-132 16-106 (411)
56 3mgx_A Putative P450 monooxyge 98.3 3.6E-06 1.2E-10 60.2 8.1 78 53-132 37-120 (415)
57 2z3t_A Cytochrome P450; monoxy 98.3 2E-06 6.9E-11 61.6 6.7 77 53-132 20-112 (425)
58 2wm5_A CYP124, putative cytoch 98.2 1.1E-06 3.7E-11 63.2 4.8 78 53-132 44-131 (435)
59 1q5d_A P450 epoxidase; cytochr 98.2 2E-06 7E-11 61.4 5.6 76 52-132 25-109 (419)
60 2dkk_A Cytochrome P450; CYP158 98.2 2.1E-06 7.2E-11 61.3 5.3 79 52-133 26-111 (411)
61 2xkr_A CYP142, putative cytoch 98.2 4.8E-06 1.6E-10 59.0 6.8 73 52-132 17-89 (398)
62 3tkt_A Cytochrome P450; aromat 98.2 1.9E-06 6.6E-11 62.2 4.6 76 55-132 47-138 (450)
63 2uuq_A CYP130, cytochrome P450 98.1 3.1E-06 1.1E-10 60.5 5.0 76 53-132 25-110 (414)
64 3nc3_A Cytochrome P450 CYPX; c 98.0 6.1E-06 2.1E-10 59.4 4.6 74 53-132 53-127 (441)
65 1n40_A P450 MT2, cytochrome P4 98.0 4.4E-06 1.5E-10 59.3 3.7 46 52-100 15-61 (396)
66 3r9b_A Cytochrome P450 164A2; 97.9 7.7E-06 2.6E-10 58.3 4.2 76 52-132 28-111 (418)
67 1lfk_A OXYB, P450 monooxygenas 97.9 1.1E-05 3.9E-10 57.2 4.6 71 60-132 20-102 (398)
68 3b4x_A 367AA long hypothetical 97.9 2.6E-05 8.8E-10 54.8 5.6 71 56-132 2-82 (367)
69 2rfb_A Cytochrome P450; heme, 97.8 2.6E-05 8.9E-10 54.2 4.8 60 64-132 2-61 (343)
70 1io7_A Cytochrome P450 CYP119; 97.8 3.9E-05 1.4E-09 53.8 5.5 72 56-133 2-83 (368)
71 3buj_A CALO2; heme, iron, meta 97.7 8.4E-06 2.9E-10 57.8 1.7 74 53-132 13-93 (397)
72 3rwl_A Cytochrome P450 alkane 97.7 0.00016 5.5E-09 51.8 7.2 78 53-132 38-125 (426)
73 3p3o_A Cytochrome P450; monoox 96.7 0.00048 1.6E-08 49.1 1.4 75 53-132 33-114 (416)
74 4dnj_A Putative cytochrome P45 96.6 0.0056 1.9E-07 43.6 6.5 88 40-132 19-113 (412)
75 2wiy_A XPLA-heme, cytochrome P 96.4 0.0016 5.6E-08 46.0 2.6 74 53-132 20-93 (394)
76 2yjn_B Erycii, DTDP-4-keto-6-d 94.3 0.011 3.7E-07 42.0 0.7 62 35-103 36-102 (381)
77 4dxy_A Cytochrome P450, CYP101 90.7 1.9 6.4E-05 30.7 8.3 77 53-131 37-114 (417)
78 1whv_A Poly(A)-specific ribonu 70.7 8.1 0.00028 21.9 4.0 46 49-94 22-68 (100)
79 3ctr_A Poly(A)-specific ribonu 65.5 3 0.0001 23.7 1.5 43 52-94 15-58 (101)
80 1s79_A Lupus LA protein; RRM, 62.3 18 0.00062 20.1 5.9 59 41-102 13-79 (103)
81 1iqt_A AUF1, heterogeneous nuc 60.6 15 0.00051 18.6 4.5 47 55-101 12-67 (75)
82 2diu_A KIAA0430 protein; struc 56.5 24 0.00083 19.8 5.7 63 42-105 12-77 (96)
83 3s6e_A RNA-binding protein 39; 48.1 37 0.0013 19.4 4.4 70 35-104 3-85 (114)
84 2krb_A Eukaryotic translation 48.0 28 0.00095 17.9 7.0 59 43-102 5-75 (81)
85 2mss_A Protein (musashi1); RNA 46.2 28 0.00096 17.5 4.9 47 55-101 12-67 (75)
86 3lqv_A PRE-mRNA branch site pr 44.5 40 0.0014 18.7 7.3 65 35-102 4-75 (115)
87 2ks1_B Epidermal growth factor 43.8 27 0.00091 16.5 3.2 7 19-25 31-37 (44)
88 2pe8_A Splicing factor 45; RRM 38.7 51 0.0017 18.3 4.1 68 36-103 5-85 (105)
89 3beg_B Splicing factor, argini 37.5 55 0.0019 18.3 6.2 60 41-103 18-80 (115)
90 4fxv_A ELAV-like protein 1; RN 36.6 53 0.0018 17.8 4.7 57 42-101 22-88 (99)
91 1x4b_A Heterogeneous nuclear r 36.0 57 0.0019 18.0 3.9 57 42-101 30-95 (116)
92 2voo_A Lupus LA protein; RNA-b 30.9 84 0.0029 19.5 4.3 57 43-102 113-177 (193)
93 2kvi_A Nuclear polyadenylated 30.0 67 0.0023 17.1 5.7 61 41-103 12-74 (96)
94 2hvz_A Splicing factor, argini 29.7 69 0.0024 17.1 5.4 58 43-103 4-66 (101)
95 2cpi_A CCR4-NOT transcription 28.1 26 0.00089 19.5 1.4 59 41-102 17-91 (111)
96 2dnz_A Probable RNA-binding pr 27.5 73 0.0025 16.7 6.6 61 40-103 6-76 (95)
97 2wbr_A GW182, gawky, LD47780P; 27.2 83 0.0028 17.2 4.9 52 40-94 8-62 (89)
98 2jwn_A Embryonic polyadenylate 26.7 89 0.0031 17.4 4.6 56 43-101 40-104 (124)
99 3ex7_B RNA-binding protein 8A; 26.6 90 0.0031 17.4 6.6 60 41-103 24-93 (126)
100 2nlw_A Eukaryotic translation 26.5 84 0.0029 17.0 7.0 62 40-102 16-89 (105)
101 3v4m_A Splicing factor U2AF 65 26.5 88 0.003 17.3 5.0 48 57-104 30-89 (105)
102 1nu4_A U1A RNA binding domain; 26.5 78 0.0027 16.6 5.2 60 41-100 10-77 (97)
103 4f25_A Polyadenylate-binding p 26.4 89 0.003 17.3 5.3 57 42-101 8-72 (115)
104 2cqd_A RNA-binding region cont 26.1 89 0.003 17.2 5.3 57 41-100 19-84 (116)
105 1p27_B RNA-binding protein 8A; 26.1 84 0.0029 16.9 5.9 57 42-101 26-92 (106)
106 3s7r_A Heterogeneous nuclear r 26.0 75 0.0026 16.3 4.3 57 40-99 12-77 (87)
107 1uaw_A Mouse-musashi-1; RNP-ty 25.4 71 0.0024 15.9 3.2 56 43-101 4-68 (77)
108 3ns6_A Eukaryotic translation 25.2 87 0.003 16.8 5.5 61 41-101 8-81 (100)
109 1l3k_A Heterogeneous nuclear r 24.8 1.2E+02 0.0041 18.2 5.2 57 40-99 14-79 (196)
110 3md1_A Nuclear and cytoplasmic 24.4 78 0.0027 16.0 4.6 46 56-101 15-70 (83)
111 1whx_A Hypothetical protein ri 24.1 99 0.0034 17.0 6.6 60 42-104 13-76 (111)
112 2jvo_A Nucleolar protein 3; nu 24.1 98 0.0033 17.0 4.8 57 42-101 34-92 (108)
113 3pgw_S U1-70K; protein-RNA com 23.9 2E+02 0.007 20.6 6.0 58 40-100 103-170 (437)
114 3ue2_A Poly(U)-binding-splicin 23.8 1.1E+02 0.0037 17.4 4.8 67 38-104 19-101 (118)
115 2ghp_A U4/U6 snRNA-associated 23.2 1.6E+02 0.0055 19.2 4.8 61 40-103 42-109 (292)
116 2cq4_A RNA binding motif prote 23.2 1E+02 0.0035 16.9 4.8 56 43-101 29-93 (114)
117 3ucg_A Polyadenylate-binding p 22.9 88 0.003 16.0 4.4 56 43-101 10-74 (89)
118 2cq3_A RNA-binding protein 9; 22.0 1E+02 0.0035 16.4 6.5 60 39-101 15-82 (103)
119 3zzy_A Polypyrimidine tract-bi 21.4 1.3E+02 0.0046 17.5 4.9 50 42-94 31-85 (130)
120 2jvr_A Nucleolar protein 3; RN 20.7 1.2E+02 0.0043 16.9 5.3 59 41-102 30-95 (111)
121 2dh8_A DAZ-associated protein 20.5 1.1E+02 0.0039 16.3 5.3 60 40-102 17-85 (105)
122 2d9p_A Polyadenylate-binding p 20.1 1.1E+02 0.0039 16.2 5.9 62 38-102 14-83 (103)
No 1
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.79 E-value=4.9e-19 Score=127.99 Aligned_cols=103 Identities=29% Similarity=0.479 Sum_probs=85.5
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
++.+.||||+++|++||+..+...+.+..+.++.++||++|++++|+.++++++||++++++|.+++..|++|+......
T Consensus 7 s~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~ 86 (479)
T 3tbg_A 7 SKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86 (479)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred CCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence 44568999999999999998867788899999999999999999999999999999999999999988999988765543
Q ss_pred cc--ccccCC-ccchhHHHHHHhhhh
Q 039142 110 DT--DSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~--~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
.. ...+.| .++..|+.|+.+|+.
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~ 112 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRF 112 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHH
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHH
Confidence 32 222344 567779999999874
No 2
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.70 E-value=5.4e-17 Score=117.29 Aligned_cols=101 Identities=31% Similarity=0.479 Sum_probs=84.5
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
++.+.||||+++|++||+..+...+++..+.++.++||++|++++|+.+.++++||+.+++++.++...|++++......
T Consensus 7 ~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~~ 86 (476)
T 3e6i_A 7 SKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAFH 86 (476)
T ss_dssp ---CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGGG
T ss_pred CCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchhh
Confidence 45577899999999999999866788999999999999999999999999999999999999999888888887655432
Q ss_pred ccccccCCccchhHHHHHHhhhh
Q 039142 110 DTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
. ..+.|++..+|+.|+++|+.
T Consensus 87 ~--~~~~~l~~~~g~~w~~~Rr~ 107 (476)
T 3e6i_A 87 A--HRDRGIIFNNGPTWKDIRRF 107 (476)
T ss_dssp G--GTTSSSTTCCSTTHHHHHHH
T ss_pred e--ecCCCEEecCCcHHHHHHHH
Confidence 2 22337888889999999873
No 3
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.70 E-value=3.7e-17 Score=118.87 Aligned_cols=104 Identities=25% Similarity=0.455 Sum_probs=79.6
Q ss_pred CCCCCCCCCCCCccccccccCCC-CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDV-SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
...+.||||+++|++||+..+.. ..++..+.++.++||++|++++|+.+.++++||+.+++++.+++..|++++.....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~ 84 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL 84 (494)
T ss_dssp -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 34567899999999999998843 35788899999999999999999999999999999999999998899999876543
Q ss_pred cccccccCCc-cchhHHHHHHhhhhc
Q 039142 109 IDTDSIYNGF-KDNVRLMWERFLSCQ 133 (137)
Q Consensus 109 ~~~~~~~~g~-~~~~~~~w~~~r~~~ 133 (137)
......+.|+ ++..|+.|+.+|+..
T Consensus 85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~ 110 (494)
T 3swz_A 85 DIASNNRKGIAFADSGAHWQLHRRLA 110 (494)
T ss_dssp HHHTTTTCSSSSSCSSHHHHHHHHHH
T ss_pred HHhccCCCCeEeCCCCHHHHHHHHHH
Confidence 2212224564 445699999998853
No 4
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.69 E-value=3.6e-17 Score=118.56 Aligned_cols=99 Identities=22% Similarity=0.305 Sum_probs=83.6
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhc-cccccCCCCcccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTH-DLQFCSRPALDGK 108 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~-~~~~~~~~~~~~~ 108 (137)
++.+.+|||+++|++||+..+ ..+++..+.++.++||+++++++|+.+.++++||+.+++++.++ ...|.+++.....
T Consensus 11 ~k~~~~PGP~~~PliGn~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~ 89 (485)
T 3nxu_A 11 FKKLGIPGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPV 89 (485)
T ss_dssp HHHHTCCCCCCBTTTBTGGGG-GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCC
T ss_pred HhhCCCCCCCCcCeecCcHHh-hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccc
Confidence 344568999999999999988 56788899999999999999999999999999999999999887 5678777654332
Q ss_pred cccccccCCccchhHHHHHHhhhh
Q 039142 109 IDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 109 ~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
...+.|++..+|+.|+++|+.
T Consensus 90 ---~~~~~~l~~~~g~~w~~~R~~ 110 (485)
T 3nxu_A 90 ---GFMKSAISIAEDEEWKRLRSL 110 (485)
T ss_dssp ---GGGGGSTTTCCHHHHHHHHHH
T ss_pred ---cccccCccccCCcHHHHHHhh
Confidence 234567888999999999884
No 5
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.69 E-value=5.2e-17 Score=118.20 Aligned_cols=101 Identities=25% Similarity=0.435 Sum_probs=66.6
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
++.+.||||+++|++||+..+ ..+++..+.++.++||++|++++|+.+.++++||+.+++++.++...|++++......
T Consensus 6 ~~~~~pPgP~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~ 84 (507)
T 3pm0_A 6 SSKGKPPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFR 84 (507)
T ss_dssp -----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHH
T ss_pred CCCCCCcCCCCCCeeCchhhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHH
Confidence 455678999999999999988 5788999999999999999999999999999999999999998888999888766543
Q ss_pred ccccccCCc-cchhHHHHHHhhhh
Q 039142 110 DTDSIYNGF-KDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~~~~~~g~-~~~~~~~w~~~r~~ 132 (137)
. ...+.|+ ++..|+.|+.+|+.
T Consensus 85 ~-~~~g~~l~~~~~g~~w~~~R~~ 107 (507)
T 3pm0_A 85 V-VSGGRSMAFGHYSEHWKVQRRA 107 (507)
T ss_dssp H-GGGGTCSSSSCSSHHHHHHHHH
T ss_pred h-hcCCCceEECCCChHHHHHHHH
Confidence 3 2234564 56679999999874
No 6
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.64 E-value=1.2e-15 Score=110.61 Aligned_cols=100 Identities=29% Similarity=0.378 Sum_probs=81.5
Q ss_pred CCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID 110 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~ 110 (137)
..+.||||+++|++||+..+...+++..+.++.++||+++++++|+.+.++++||+.+++|+.++...|++++.......
T Consensus 8 ~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~ 87 (476)
T 1po5_A 8 KGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVDP 87 (476)
T ss_dssp -CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGCS
T ss_pred CCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHHh
Confidence 33678999999999999888557788999999999999999999999999999999999999877778887664332211
Q ss_pred cccccCCccchhHHHHHHhhh
Q 039142 111 TDSIYNGFKDNVRLMWERFLS 131 (137)
Q Consensus 111 ~~~~~~g~~~~~~~~w~~~r~ 131 (137)
...+.|++..+|+.|+++|+
T Consensus 88 -~~~~~~l~~~~g~~w~~~Rr 107 (476)
T 1po5_A 88 -IFQGYGVIFANGERWRALRR 107 (476)
T ss_dssp -CCSSCCCCCSSHHHHHHHHH
T ss_pred -hcCCCceEecCCcHHHHHHH
Confidence 12345777789999999987
No 7
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.63 E-value=3.5e-16 Score=113.80 Aligned_cols=100 Identities=20% Similarity=0.181 Sum_probs=75.9
Q ss_pred CCCCCCCCCCCccccccccCCC---CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDV---SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
+.+.||||+++|++||+..+.. ...+..+.++.++||+++++++|+.+.++++||+.+++++.+ ..|++++....
T Consensus 43 ~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~~ 120 (503)
T 3s79_A 43 GTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSKL 120 (503)
T ss_dssp --CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCHH
T ss_pred ccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhhh
Confidence 4568999999999999987622 234567888999999999999999999999999999999964 36777765432
Q ss_pred cccc-ccccCC-ccchhHHHHHHhhhh
Q 039142 108 KIDT-DSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 108 ~~~~-~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
.... ...+.| .+..+|+.|+.+|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~w~~~Rr~ 147 (503)
T 3s79_A 121 GLQCIGMHEKGIIFNNNPELWKTTRPF 147 (503)
T ss_dssp HHHHHTCTTSSSTTCCCHHHHHHHHHH
T ss_pred hhhhhccCCCceeeCCCccHHHHHHHh
Confidence 2221 233456 567789999999884
No 8
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.61 E-value=8.8e-16 Score=111.53 Aligned_cols=97 Identities=23% Similarity=0.325 Sum_probs=76.7
Q ss_pred cCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
.+..+.||||++ +..+...+++..+.++.++||+++++++|+.+.++++||+.+++++.++...|++++.....
T Consensus 25 ~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~ 98 (496)
T 3qz1_A 25 LRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSY 98 (496)
T ss_dssp ----CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTT
T ss_pred ccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchH
Confidence 345578888876 44554678899999999999999999999999999999999999999888889888876554
Q ss_pred cccccccC-Cccchh-HHHHHHhhhh
Q 039142 109 IDTDSIYN-GFKDNV-RLMWERFLSC 132 (137)
Q Consensus 109 ~~~~~~~~-g~~~~~-~~~w~~~r~~ 132 (137)
.. ...+. |+...+ |+.|+.+|+.
T Consensus 99 ~~-~~~~~~~l~~~~~g~~w~~~Rr~ 123 (496)
T 3qz1_A 99 KL-VSQRCQDISLGDYSLLWKAHKKL 123 (496)
T ss_dssp TT-SCTTCCCSSSSCCSHHHHHHHHH
T ss_pred HH-hcCCCCceEECCCCHHHHHHHHH
Confidence 33 22333 777777 9999999884
No 9
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.60 E-value=1.8e-15 Score=109.57 Aligned_cols=98 Identities=30% Similarity=0.440 Sum_probs=74.8
Q ss_pred CCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccc
Q 039142 33 KLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTD 112 (137)
Q Consensus 33 ~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~ 112 (137)
+.||||+++|++||+..+...+++..+.++.++||+++++++|+.+.++++||+.+++++.++...|++++....... .
T Consensus 11 ~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~~-~ 89 (477)
T 1r9o_A 11 KLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAER-A 89 (477)
T ss_dssp BCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCCT-T
T ss_pred CCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhhh-c
Confidence 578999999999999887445677889999999999999999998999999999999999877778887665332211 1
Q ss_pred cccCCccchhHHHHHHhhh
Q 039142 113 SIYNGFKDNVRLMWERFLS 131 (137)
Q Consensus 113 ~~~~g~~~~~~~~w~~~r~ 131 (137)
..+.|++..+|+.|+++|+
T Consensus 90 ~~~~~l~~~~g~~w~~~Rr 108 (477)
T 1r9o_A 90 NRGFGIVFSNGKKWKEIRR 108 (477)
T ss_dssp TCTTSSTTCCHHHHHHHHH
T ss_pred cCCCceEecCChHHHHHHH
Confidence 2345777779999999987
No 10
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.59 E-value=3.6e-15 Score=108.06 Aligned_cols=100 Identities=26% Similarity=0.324 Sum_probs=81.0
Q ss_pred CCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc
Q 039142 32 TKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT 111 (137)
Q Consensus 32 ~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 111 (137)
.+.||||+++|++||+..+...+++..+.++.++||+++++++|+.+.++++||+.+++++.++...|++++.......
T Consensus 9 ~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~~- 87 (476)
T 2fdv_A 9 GKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFDW- 87 (476)
T ss_dssp CBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHHH-
T ss_pred CCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHhh-
Confidence 3578999999999999988556788999999999999999999999999999999999999877778877665432211
Q ss_pred ccccCCccchhHHHHHHhhhh
Q 039142 112 DSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~~g~~~~~~~~w~~~r~~ 132 (137)
...+.|+...+|+.|+++|+.
T Consensus 88 ~~~~~~l~~~~g~~~~~~Rr~ 108 (476)
T 2fdv_A 88 VFKGYGVVFSNGERAKQLRRF 108 (476)
T ss_dssp HHTTCSSSSCCHHHHHHHHHH
T ss_pred hcCCCCeEecCchHHHHHHHH
Confidence 112456777789999998874
No 11
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.59 E-value=5.4e-16 Score=112.00 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCCCCCCC-CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc
Q 039142 33 KLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT 111 (137)
Q Consensus 33 ~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 111 (137)
+.||+|++ +|++||+..+ .++++.++.++.++||++|++++|+.+.++++||+.+++++.++...|++++.......
T Consensus 11 ~~PP~~~~~lP~iG~~~~~-~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~- 88 (461)
T 3ld6_A 11 KSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT- 88 (461)
T ss_dssp CCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH-
T ss_pred CCCCCCCCCcCeeeeHHHh-hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh-
Confidence 45677764 8999999988 77899999999999999999999999999999999999999988878877765444333
Q ss_pred ccccCC-ccchhHHHHHHhhhh
Q 039142 112 DSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
...+.| .++.+++.|+.+|+.
T Consensus 89 ~~~g~~~~~~~~~~~~~~~R~~ 110 (461)
T 3ld6_A 89 PVFGKGVAYDVPNPVFLEQKKM 110 (461)
T ss_dssp HHHCTTSGGGSCHHHHHHHHHH
T ss_pred ccCCCccccCCCcHHHHHHHHh
Confidence 455666 567889999999874
No 12
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.58 E-value=3.9e-15 Score=108.43 Aligned_cols=99 Identities=24% Similarity=0.468 Sum_probs=79.8
Q ss_pred CCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc
Q 039142 32 TKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT 111 (137)
Q Consensus 32 ~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 111 (137)
.+.+|||+++|++||+..+ ..+++..+.++.++||+++++++|+.+.++++||+.+++++.++...|++++.......
T Consensus 15 lp~~PgP~~~p~~G~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~- 92 (495)
T 2hi4_A 15 LKSPPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTL- 92 (495)
T ss_dssp CBCCCCCCCBTTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHT-
T ss_pred CCCCCCCCCCcceeeHHhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHH-
Confidence 3445999999999999877 56788899999999999999999999999999999999999988778988876543211
Q ss_pred ccccCCccch--hHHHHHHhhhh
Q 039142 112 DSIYNGFKDN--VRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~~g~~~~--~~~~w~~~r~~ 132 (137)
...+.|+... +|+.|+++|+.
T Consensus 93 ~~~~~~l~~~~~~g~~w~~~Rr~ 115 (495)
T 2hi4_A 93 ITDGQSLTFSTDSGPVWAARRRL 115 (495)
T ss_dssp STTSCCTTTSSCCSHHHHHHHHH
T ss_pred hcCCCCEEEcCCCChHHHHHHHH
Confidence 1123565555 69999999884
No 13
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.58 E-value=2.1e-15 Score=109.09 Aligned_cols=103 Identities=23% Similarity=0.343 Sum_probs=82.2
Q ss_pred cCCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCC
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA 104 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~ 104 (137)
.++.+.+|||+++|++||+..+. ..+++..+.++.++||+++++++|+.+.++++||+.+++++.++ ..|.+++.
T Consensus 20 ~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~~r~~ 98 (482)
T 3k9v_A 20 TRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHPQRLE 98 (482)
T ss_dssp CEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSCCCCC
T ss_pred cCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCCCCCC
Confidence 34566789999999999998763 24578889999999999999999999999999999999999874 47877765
Q ss_pred ccccc---ccccccCCccchhHHHHHHhhhh
Q 039142 105 LDGKI---DTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 105 ~~~~~---~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
..... .....+.|++..+|+.|+++|+.
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~ 129 (482)
T 3k9v_A 99 IKPWKAYRDHRNEAYGLMILEGQEWQRVRSA 129 (482)
T ss_dssp CHHHHHHHHHHTCCCCTTTCCHHHHHHHHHH
T ss_pred chHHHHHHHhcCCCCCceeCCCchHHHHHHH
Confidence 43221 11123567888899999999874
No 14
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.54 E-value=2.8e-15 Score=108.17 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=78.5
Q ss_pred CCCCCCCC-CCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 30 NNTKLPPG-PWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 30 ~~~~~~p~-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
...+.||| |+++|++||+..+ ..+++.++.++.++||++|++++++.+.+++++|+.+++++.++...+..++.....
T Consensus 8 ~~~~~PPg~P~~lP~iG~l~~~-~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 8 AGVKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp --CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCccccHHhh-ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 45567898 8899999999888 577899999999999999999999999999999999999998876666544322221
Q ss_pred cccccccCCc-cchhHHHHHHhhhh
Q 039142 109 IDTDSIYNGF-KDNVRLMWERFLSC 132 (137)
Q Consensus 109 ~~~~~~~~g~-~~~~~~~w~~~r~~ 132 (137)
.. ...+.|+ +...++.|+.+|+.
T Consensus 87 ~~-~~~g~g~~~~~~g~~w~~~Rr~ 110 (461)
T 3i3k_A 87 TT-PVFGKGVAYDVPNPVFLEQKKM 110 (461)
T ss_dssp HH-HHHCTTSGGGSCHHHHHHHHHH
T ss_pred hh-hhcCCeeeeCCCcHHHHHHHHH
Confidence 11 3445664 44578999998874
No 15
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.52 E-value=6.5e-15 Score=105.66 Aligned_cols=98 Identities=15% Similarity=0.110 Sum_probs=79.6
Q ss_pred CCCCCCCCC-CccccccccCCCCChHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 32 TKLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 32 ~~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
.+.||+|++ +|++||+..+ ..+++..+.++.++|| ++|++++|+.+.++++||+.+++++.++...|++++.....
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~- 79 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF-GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFM- 79 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH-HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGG-
T ss_pred CCCCCCCCCCcchhccHHHH-ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHH-
Confidence 457888665 9999999888 5678899999999999 99999999999999999999999999887788777543322
Q ss_pred ccccccCC-ccchhHHHHHHhhhh
Q 039142 110 DTDSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
. ...+.| .+...++.|+.+|+.
T Consensus 80 ~-~~~g~~~~~~~~~~~~~~~R~~ 102 (450)
T 3gw9_A 80 V-PVFGEGVAYAAPYPRMREQLNF 102 (450)
T ss_dssp H-HHHCTTSGGGSCHHHHHHHHHH
T ss_pred H-HHhcCCcccCCCcHHHHHHHHH
Confidence 2 344566 345579999998873
No 16
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.51 E-value=1.8e-14 Score=104.66 Aligned_cols=102 Identities=30% Similarity=0.514 Sum_probs=78.7
Q ss_pred CCCCCCCCCCCCccccccccCCCCC--hHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSK--PQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
++.+.+|||+++|++||+..+.... ++..+.++.++||+++++++|+.+.++++||+.+++++.+++..|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 3456789999999999998773333 78899999999999999999999999999999999999987778888765432
Q ss_pred ccccccccCC-ccchhHHHHHHhhhh
Q 039142 108 KIDTDSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 108 ~~~~~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
.... ..+.| .+..+|+.|+++|+.
T Consensus 89 ~~~~-~~~~~~~~~~~g~~w~~~R~~ 113 (481)
T 3czh_A 89 FMKM-TKMGGLLNSRYGRGWVDHRRL 113 (481)
T ss_dssp HHHH-HTTCSSTTCCSSHHHHHHHHH
T ss_pred HHhh-cCCCCeEeCCCChHHHHHHHH
Confidence 2111 11235 456789999999874
No 17
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.42 E-value=5e-14 Score=102.48 Aligned_cols=100 Identities=10% Similarity=0.052 Sum_probs=74.4
Q ss_pred cCCCCCCCCCCC-CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 29 RNNTKLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 29 ~~~~~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
++..+.||||++ +|++||+..+ ..+++..+.++.++||++|++++|+.++++++||+.+++++.++...++.++....
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 92 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDF-GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIF 92 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHh-ccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHH
Confidence 455567899988 8999999888 55688999999999999999999999999999999999999776542443332222
Q ss_pred ccccccccCCccchhHHHHHHhh
Q 039142 108 KIDTDSIYNGFKDNVRLMWERFL 130 (137)
Q Consensus 108 ~~~~~~~~~g~~~~~~~~w~~~r 130 (137)
... ...+.|.....++.|++.+
T Consensus 93 ~~~-~~~g~~~~~~~~~~~rr~~ 114 (498)
T 3b6h_A 93 LME-RIFDVQLPHYSPSDEKARM 114 (498)
T ss_dssp HHH-HTSCCCCTTCCHHHHHHHH
T ss_pred HHH-HHcCCCccccCHHHHHHHH
Confidence 111 2345555566777776443
No 18
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.42 E-value=3.2e-14 Score=103.38 Aligned_cols=102 Identities=17% Similarity=0.109 Sum_probs=76.8
Q ss_pred hhcCCCCCCCCCCC-CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc
Q 039142 27 TSRNNTKLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL 105 (137)
Q Consensus 27 ~~~~~~~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~ 105 (137)
.+..+.+.||||++ +|++||+..+ ..+++.++.++.++||+++++++|+.+.+++++|+.+++++.++. .+...+..
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~-~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~-~~~~~~~~ 84 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGK-YFDWKKFH 84 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCT-TEESSHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHH-hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCC-ccchHHHH
Confidence 34456678999999 6999999998 788999999999999999999999999999999999999996653 23222221
Q ss_pred ccccccccccCC-ccchhHHHHHHhhh
Q 039142 106 DGKIDTDSIYNG-FKDNVRLMWERFLS 131 (137)
Q Consensus 106 ~~~~~~~~~~~g-~~~~~~~~w~~~r~ 131 (137)
..... ..++.+ ....+|+.|+++|+
T Consensus 85 ~~~~~-~~~g~~~~~~~~g~~~~~~Rr 110 (491)
T 3v8d_A 85 FALSA-KAFGHRSIDPMDGNTTENIND 110 (491)
T ss_dssp HHHHH-HHHTCCCCCGGGSSBCCCHHH
T ss_pred HHHHH-HhcCCcccccccchhHHHHHH
Confidence 11111 334444 44457888888776
No 19
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.40 E-value=1.1e-13 Score=100.03 Aligned_cols=96 Identities=15% Similarity=0.225 Sum_probs=58.8
Q ss_pred CCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc
Q 039142 32 TKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT 111 (137)
Q Consensus 32 ~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 111 (137)
...||||+++|++||+..+ ..++..++.++.+ ||+++++++|+.+.++++||+.+++++.++ .|.+++.......
T Consensus 22 ~eppPgP~~~P~iG~~~~~-~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~- 96 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRL-ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLE- 96 (467)
T ss_dssp CBCCEECCCCSTTHHHHHH-HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC------------
T ss_pred CCCCCCCCCCCcccchHHh-ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHH-
Confidence 3457899999999999988 5678888888877 999999999999999999999999999876 6644433332222
Q ss_pred cccc-CCccchhHHHHHHhhhh
Q 039142 112 DSIY-NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~-~g~~~~~~~~w~~~r~~ 132 (137)
...+ .|++..+++.|+++|+.
T Consensus 97 ~~~g~~~l~~~dg~~h~~~R~~ 118 (467)
T 3dbg_A 97 GLLGKEGVATANGPLHRRQRRT 118 (467)
T ss_dssp -------------------CGG
T ss_pred HhcCCCCcccCCcHHHHHHHHH
Confidence 3445 67888999999998874
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.40 E-value=4.5e-13 Score=96.69 Aligned_cols=96 Identities=14% Similarity=0.038 Sum_probs=64.4
Q ss_pred CCCCC-CCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc
Q 039142 33 KLPPG-PWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT 111 (137)
Q Consensus 33 ~~~p~-p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~ 111 (137)
+.||+ |+++|++||+..+ ..+++..+.++.++||+++++++++.+.++++||+.+++++.+++..|++++..... .
T Consensus 4 ~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~-~- 80 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF-RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFM-T- 80 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGG-H-
T ss_pred CCCCCCCCCCCCccCHHHH-hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHH-H-
Confidence 56787 7789999999888 567889999999999999999999999999999999999998776677776644221 1
Q ss_pred ccccCCccchhHHHHHHhhhh
Q 039142 112 DSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~~g~~~~~~~~w~~~r~~ 132 (137)
...+.|+. .+++.|+.+|+.
T Consensus 81 ~~~g~~~~-~~~~~~~~~R~~ 100 (455)
T 2cib_A 81 PIFGEGVV-FDASPERRKEML 100 (455)
T ss_dssp HHHC-----------------
T ss_pred hhcCCccc-cCcHHHHHHHhh
Confidence 22334543 468889888774
No 21
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.38 E-value=2.4e-13 Score=97.81 Aligned_cols=99 Identities=16% Similarity=0.229 Sum_probs=75.0
Q ss_pred cCCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
.++.+.+|||+++|++||+..+ ..++. .+.++.++||+++++++++.+.++++||+.+++++.++...|+.+. ...
T Consensus 8 ~~~~~~pPgp~~~P~iG~~~~~-~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~--~~~ 83 (444)
T 2ve3_A 8 LNSLPIPPGDFGLPWLGETLNF-LNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATW--PLS 83 (444)
T ss_dssp -CCCCCCCCCCCBTTTBTHHHH-HHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEEC--CHH
T ss_pred CCCCCCCCCCCCCCccccHHHH-hcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccch--hHH
Confidence 3555788999999999999877 33455 7778999999999999888889999999999999987655565321 111
Q ss_pred cccccccC-CccchhHHHHHHhhhh
Q 039142 109 IDTDSIYN-GFKDNVRLMWERFLSC 132 (137)
Q Consensus 109 ~~~~~~~~-g~~~~~~~~w~~~r~~ 132 (137)
.. ...+. |++..+|+.|+.+|+.
T Consensus 84 ~~-~~~g~~~l~~~~g~~~~~~R~~ 107 (444)
T 2ve3_A 84 TR-ILLGPNALATQMGEIHRSRRKI 107 (444)
T ss_dssp HH-HHHCTTSGGGCCHHHHHHHHHH
T ss_pred HH-HHhCccccccCCchHHHHHHHH
Confidence 11 22344 6777899999999874
No 22
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.38 E-value=3.3e-13 Score=97.80 Aligned_cols=103 Identities=19% Similarity=0.167 Sum_probs=78.6
Q ss_pred hcCCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCC
Q 039142 28 SRNNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRP 103 (137)
Q Consensus 28 ~~~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~ 103 (137)
..++.+.+|||+..++. ++..+. ..+++..+.++.++||+++++++|+.+.|+++||+.+++++.++. .|++++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence 34556678999877765 655442 235778899999999999999999999999999999999997764 788887
Q ss_pred Ccccccc---cccccCCccchhHHHHHHhhhh
Q 039142 104 ALDGKID---TDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 104 ~~~~~~~---~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
....... ....+.|++..+|+.|+++|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~ 113 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVA 113 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCCHHHHHHHHHH
T ss_pred CCcHHHHHHHHccccCCCccCCcHHHHHHHHh
Confidence 6543211 1223467889999999999884
No 23
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.37 E-value=7.9e-14 Score=101.15 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=72.5
Q ss_pred CCCCCCCCCCC-CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccc
Q 039142 30 NNTKLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGK 108 (137)
Q Consensus 30 ~~~~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~ 108 (137)
...+.||||++ +|++||+..+ ..+++..+.+++++||++|++++|+.+.++++||+.+++++.++.. +..++.....
T Consensus 10 ~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~-~~~~~~~~~~ 87 (491)
T 3dax_A 10 RQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKY-FDWKKFHFAT 87 (491)
T ss_dssp CCTTCCCEEEEEESCTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTT-EESSHHHHHH
T ss_pred cCCCCCCcCCCcccchhhHHHH-hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCcc-CChHHHHHHH
Confidence 44467888887 8999999988 5678889999999999999999999999999999999999976542 2222211111
Q ss_pred cccccccCCcc-chhHHHHHHhhh
Q 039142 109 IDTDSIYNGFK-DNVRLMWERFLS 131 (137)
Q Consensus 109 ~~~~~~~~g~~-~~~~~~w~~~r~ 131 (137)
.. ...+.|.. ...++.|+.+|+
T Consensus 88 ~~-~~~g~~~~~~~~g~~w~~~r~ 110 (491)
T 3dax_A 88 SA-KAFGHRSIDPMDGNTTENIND 110 (491)
T ss_dssp HH-HHHTCCCCCGGGTSBCCCHHH
T ss_pred HH-HHcCCCcccccchhHHHHHHH
Confidence 11 23345544 667777876655
No 24
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.36 E-value=1.3e-12 Score=94.71 Aligned_cols=97 Identities=18% Similarity=0.195 Sum_probs=73.8
Q ss_pred CCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc-
Q 039142 33 KLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT- 111 (137)
Q Consensus 33 ~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~- 111 (137)
+.+|||+++|++||+..+...+++..+.++.++||+++++++++.+.++++||+.+++++.+ ..|.+.+. ......
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~--~~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDE--SRFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCT--TTEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhh--cCcCcCch-hHHHHHH
Confidence 46799999999999998855678888899999999999999999999999999999999954 24532221 111111
Q ss_pred ccccCCccch--hHHHHHHhhhh
Q 039142 112 DSIYNGFKDN--VRLMWERFLSC 132 (137)
Q Consensus 112 ~~~~~g~~~~--~~~~w~~~r~~ 132 (137)
...+.|++.. +++.|+++|+.
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~ 102 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNI 102 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHH
Confidence 2234566665 89999998874
No 25
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.35 E-value=4.4e-13 Score=96.53 Aligned_cols=99 Identities=14% Similarity=0.082 Sum_probs=67.6
Q ss_pred CCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCCc--cc
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPAL--DG 107 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~--~~ 107 (137)
..+.+|||+++|++|++......+++..+.++ ++||+++++++ ++.+.++++||+.+++++.++ .|++++.. ..
T Consensus 24 ~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~ 100 (436)
T 2cd8_A 24 TQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTTP 100 (436)
T ss_dssp ----------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSSC
T ss_pred hccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccccc
Confidence 44678999999999998632256778888998 89999999998 778899999999999999875 67766531 11
Q ss_pred ccc-cccccCCccchhHHHHHHhhhh
Q 039142 108 KID-TDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 108 ~~~-~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
... ....+.++...+|+.|+++|+.
T Consensus 101 ~~~~~~~~~~~l~~~dg~~h~~~R~~ 126 (436)
T 2cd8_A 101 LTEAEAALNHNMLESDPPRHTRLRKL 126 (436)
T ss_dssp CCTTGGGTCCSGGGCCTTHHHHHHHH
T ss_pred cccccccccccccccCchHHHHHHHH
Confidence 110 0123456788899999999884
No 26
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.32 E-value=3.8e-13 Score=97.19 Aligned_cols=98 Identities=11% Similarity=0.106 Sum_probs=72.5
Q ss_pred cCCCCCCCCCCC-CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccc
Q 039142 29 RNNTKLPPGPWG-LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDG 107 (137)
Q Consensus 29 ~~~~~~~p~p~~-~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~ 107 (137)
+.+.+.||||++ +|++||+..+ ..+++..+.++.++||++|++++|+.+.++++||+.+++++.++. .++.++....
T Consensus 14 ~~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~-~~~~~~~~~~ 91 (475)
T 3b98_A 14 TRRRNEPPLDKGMIPWLGHALEF-GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVA-SLDQTSYAQV 91 (475)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTT-TEESHHHHHH
T ss_pred ccCCCCCCCCCCCcchHHhHHHH-hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCcc-cCCchHHHHH
Confidence 345567899988 8999999887 567899999999999999999999999999999999999997654 2333222111
Q ss_pred ccccccccCCccchhHHHHHHh
Q 039142 108 KIDTDSIYNGFKDNVRLMWERF 129 (137)
Q Consensus 108 ~~~~~~~~~g~~~~~~~~w~~~ 129 (137)
... ..++.|....+++.|++.
T Consensus 92 ~~~-~~~g~~~~~~~~~~~R~~ 112 (475)
T 3b98_A 92 LMK-RIFNMILPSHNPESEKKR 112 (475)
T ss_dssp HHH-HTTCCCCTTCCHHHHHHH
T ss_pred HHH-HHhCCCCCCCChHHHHHH
Confidence 111 234455556677777643
No 27
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.20 E-value=2.4e-12 Score=91.34 Aligned_cols=92 Identities=10% Similarity=-0.009 Sum_probs=73.4
Q ss_pred CCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccccccc
Q 039142 36 PGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIY 115 (137)
Q Consensus 36 p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~ 115 (137)
++++..|++||+..+ ..+++..+.++.++||++++ ++|+.+.++++||+.+++++.++ .|++++....... ...+
T Consensus 2 ~~~~~~p~iGnl~~~-~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~-~~~g 76 (389)
T 1n97_A 2 KRLSLREAWPYLKDL-QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALS-RLTG 76 (389)
T ss_dssp EECCHHHHHHHHHHH-HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHH-HHHC
T ss_pred cccccccccccHHHH-hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHH-HHhC
Confidence 456678999999887 46788899999999999999 99999999999999999999876 7877652221111 2345
Q ss_pred CCccchhHHHHHHhhhh
Q 039142 116 NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 116 ~g~~~~~~~~w~~~r~~ 132 (137)
.|+...+|+.|+++|+.
T Consensus 77 ~~l~~~~g~~h~~~R~~ 93 (389)
T 1n97_A 77 RGLLTDWGESWKEARKA 93 (389)
T ss_dssp SSTTTCCHHHHHHHHHH
T ss_pred CccccCCcHHHHHHHHH
Confidence 67888899999999884
No 28
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.00 E-value=8.2e-10 Score=78.53 Aligned_cols=94 Identities=15% Similarity=0.100 Sum_probs=63.0
Q ss_pred CCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeC-CcCEEEEeCHHHHHHHHHhcc-ccccCCCCccccccc
Q 039142 34 LPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG-FVPSLVVSSAKLAKEILKTHD-LQFCSRPALDGKIDT 111 (137)
Q Consensus 34 ~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g-~~~~i~v~~p~~i~~vl~~~~-~~~~~~~~~~~~~~~ 111 (137)
.||||+++|++|+... +++..+.++. +||+++++.++ +.+.+++++++.+++++.++. ..+.+++........
T Consensus 2 ~pPGp~~~P~~g~~~~----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~ 76 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSAS 76 (404)
T ss_dssp ----CCBSSCCCSSTT----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHH
T ss_pred CCCCCCCCCCCCCcCC----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccccc
Confidence 3799999999999764 5677777775 69999998874 455677899999999998753 334444433221110
Q ss_pred ---ccc-cCCccchhHHHHHHhhhh
Q 039142 112 ---DSI-YNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 112 ---~~~-~~g~~~~~~~~w~~~r~~ 132 (137)
... ..++...+++.|+++|+.
T Consensus 77 ~~~~~~~~~~l~~~~g~~h~~~R~~ 101 (404)
T 1jfb_A 77 GKQAAKAKPTFVDMDPPEHMHQRSM 101 (404)
T ss_dssp HHHHTTSCCCGGGCCTTHHHHHHTT
T ss_pred ccchhcccCcccccCchhHHHHHHH
Confidence 011 235777889999998874
No 29
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=98.96 E-value=1.1e-09 Score=77.99 Aligned_cols=94 Identities=16% Similarity=0.159 Sum_probs=67.5
Q ss_pred CCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEe----e-CC-cCEEEEeCHHHHHHHHHhccccccCCCC
Q 039142 31 NTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLR----L-GF-VPSLVVSSAKLAKEILKTHDLQFCSRPA 104 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~----~-g~-~~~i~v~~p~~i~~vl~~~~~~~~~~~~ 104 (137)
..+.||||+++|+. + ..+++..+.++ ++||++++++ + ++ .+.++++||+.+++++..+. .|++++.
T Consensus 8 ~~~lppgp~~~p~~-----~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~-~~~~~~~ 79 (406)
T 1ued_A 8 VAPLLREPANFQLR-----T-NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE-HFTTRPQ 79 (406)
T ss_dssp CCCEEECCTTTTCE-----E-TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS-SEECCCC
T ss_pred CCCCcccCcccCCC-----C-CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc-ccccccc
Confidence 34567889888876 2 45678888999 9999999999 7 78 89999999999999993332 3555543
Q ss_pred cc-c---ccccccccCCccchhHHHHHHhhhh
Q 039142 105 LD-G---KIDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 105 ~~-~---~~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
.. . .......+.++...+|+.|+++|+.
T Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~R~~ 111 (406)
T 1ued_A 80 FTQSKSGAHVEAQFVGQISTYDPPEHTRLRKM 111 (406)
T ss_dssp C---------CGGGTTCGGGCCTTHHHHHHHH
T ss_pred ccccccccccccccccccccCCCHHHHHHHHH
Confidence 21 1 1100113446778899999999884
No 30
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=98.95 E-value=5.5e-10 Score=79.68 Aligned_cols=89 Identities=11% Similarity=0.025 Sum_probs=65.2
Q ss_pred CccccccccCCCCChHHHHHHHHHhc-CCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccccccc-CCc
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKY-GPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIY-NGF 118 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~-~g~ 118 (137)
.|++||+..+ ..++..++.++.++| |+++++..++.+.+++++|+.++ ++.++ +.|++++...........+ .++
T Consensus 7 ~P~iG~~~~~-~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~g~~~l 83 (415)
T 3awm_A 7 TKGPDETLSL-LADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLLGQGGV 83 (415)
T ss_dssp --CCCCHHHH-HHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTSCSSSG
T ss_pred CCccchHHHH-HhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhccCCcce
Confidence 3899999887 567888999999999 79999998888899999999986 66543 4676654322111112334 467
Q ss_pred cchhHHHHHHhhhh
Q 039142 119 KDNVRLMWERFLSC 132 (137)
Q Consensus 119 ~~~~~~~w~~~r~~ 132 (137)
...+++.|+++|+.
T Consensus 84 ~~~dg~~h~~~R~~ 97 (415)
T 3awm_A 84 QGLDGETHRHRKQM 97 (415)
T ss_dssp GGCCHHHHHHHHHH
T ss_pred eecCcHHHHHHHHH
Confidence 88899999998874
No 31
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=98.92 E-value=6.2e-10 Score=79.46 Aligned_cols=91 Identities=13% Similarity=0.024 Sum_probs=67.0
Q ss_pred CCCccccccccCCCCChHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccccccc-C
Q 039142 39 WGLPFIGNLHQFDVSKPQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIY-N 116 (137)
Q Consensus 39 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~-~ 116 (137)
|+.|++||+..+ ..++..++.++.++|| +++++++++.+.+++++|+.++.++ + ...|++++...........+ .
T Consensus 6 Pg~P~lG~~~~~-~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~-~~~~~~~~~~~~~~~~~~~g~~ 82 (417)
T 1izo_A 6 PHDKSLDNSLTL-LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-D-TDRFQRQNALPKRVQKSLFGVN 82 (417)
T ss_dssp CBCCCTTHHHHH-HHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-C-TTTEECTTCSCHHHHTTTTCTT
T ss_pred CCCCccchHHHH-hhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-c-ccccccccccccchhhhhcccc
Confidence 345899999887 5678889999999998 8999999888999999999997544 3 24565544322111112344 3
Q ss_pred CccchhHHHHHHhhhh
Q 039142 117 GFKDNVRLMWERFLSC 132 (137)
Q Consensus 117 g~~~~~~~~w~~~r~~ 132 (137)
+++..+|+.|+.+|+.
T Consensus 83 ~l~~~dg~~h~~~R~~ 98 (417)
T 1izo_A 83 AIQGMDGSAHIHRKML 98 (417)
T ss_dssp CGGGCCHHHHHHHHHH
T ss_pred ceeecCChHHHHHHHH
Confidence 6788899999999884
No 32
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=98.90 E-value=8.7e-10 Score=80.10 Aligned_cols=99 Identities=13% Similarity=0.119 Sum_probs=68.1
Q ss_pred cCCCCCCCCCCCCccccccccCC----CCChHHHHHHHHHhcCC-eEEEeeCCcCE-------EEEeCHHHHHHHHHhcc
Q 039142 29 RNNTKLPPGPWGLPFIGNLHQFD----VSKPQVSFWELSRKYGP-LMSLRLGFVPS-------LVVSSAKLAKEILKTHD 96 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~G~~~~~~----~~~~~~~~~~~~~~~g~-~~~~~~g~~~~-------i~v~~p~~i~~vl~~~~ 96 (137)
..+.+.||||.++|++|++.++. ..++..++.++.++||+ +|++++++.++ +++.+++..+.++..+.
T Consensus 24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 34567899999999999997764 47889999999999999 99999998887 55666666555553321
Q ss_pred ----ccccC-CCCccccccccccc----CCccchhHHHHHHhhhh
Q 039142 97 ----LQFCS-RPALDGKIDTDSIY----NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 97 ----~~~~~-~~~~~~~~~~~~~~----~g~~~~~~~~w~~~r~~ 132 (137)
+.+.. .+.. . ..++ .+....+|+.|+.+|+.
T Consensus 104 v~k~~~~~~~~~~~--~---~l~g~~~~~~~~~~~g~~h~~~R~~ 143 (495)
T 3dsk_A 104 VEKKDLLTGTYMPS--T---ELTGGYRILSYLDPSEPKHEKLKNL 143 (495)
T ss_dssp EECSSCTTSSSCCC--G---GGGTTCCCGGGCCTTSHHHHHHHHH
T ss_pred ccccccccccCCCC--c---cccCCCcceeeeCCCchHHHHHHHH
Confidence 11111 1111 1 2222 23555688999998874
No 33
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=98.87 E-value=8.1e-09 Score=73.75 Aligned_cols=96 Identities=17% Similarity=0.096 Sum_probs=65.0
Q ss_pred CCCCCCCCCccccccccCCCCChHHHHHHHHHhc-CCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc
Q 039142 33 KLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKY-GPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID 110 (137)
Q Consensus 33 ~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~ 110 (137)
..+|+|++.|.+.....+ ..+++..+.++ ++| |+++++++ |+.+.++++||+.+++++.++ .+++++....+..
T Consensus 5 ~~~~~~~~~P~~~~~~~~-~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~ 80 (412)
T 2zbx_A 5 ATTPQTTDAPAFPSNRSC-PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDP--RLSSNRTDDNFPA 80 (412)
T ss_dssp ---CCCCSSCBSSCCCSS-TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCchh-ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCc--ccccCcccccccc
Confidence 456777777765333334 56778889999 788 99999998 888999999999999999864 3444443111110
Q ss_pred c----c-c--ccCCccchhHHHHHHhhhh
Q 039142 111 T----D-S--IYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 111 ~----~-~--~~~g~~~~~~~~w~~~r~~ 132 (137)
. . . .+.+++..+|+.|+++|+.
T Consensus 81 ~~~~~~~~~~~~~~l~~~~g~~h~~~R~~ 109 (412)
T 2zbx_A 81 TSPRFEAVRESPQAFIGLDPPEHGTRRRM 109 (412)
T ss_dssp CSGGGC----CCCCGGGCCTTHHHHHHTT
T ss_pred cccccccccccccccccCCcHHHHHHHHH
Confidence 0 0 1 2346778899999998884
No 34
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=98.82 E-value=1e-08 Score=73.08 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=68.4
Q ss_pred CCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEee-CCcC-EEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 32 TKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRL-GFVP-SLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 32 ~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g~~~-~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
.+.+|+|+++|+.++. ..+++..+.++. +||+++++++ ++.+ .++++||+.+++++.+ ..|++++......
T Consensus 7 ~~~~~~~~~~p~~~~~----~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~ 79 (406)
T 1s1f_A 7 SQAVPPVRDWPAVDLP----GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQV 79 (406)
T ss_dssp -CCSCCEEECCCCCCC----TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTB
T ss_pred hhhccCCCCCCCCccc----ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCc
Confidence 3566788778887772 466788888875 7999999996 5555 9999999999999986 3687765432211
Q ss_pred ----c-cccccCCccchhHHHHHHhhhh
Q 039142 110 ----D-TDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ----~-~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
. ....+.|+...+|+.|+++|+.
T Consensus 80 ~~~~~~~~~~~~~l~~~dg~~h~~~R~~ 107 (406)
T 1s1f_A 80 TRLAPHFIPARGAVGFLDPPDHTRLRRS 107 (406)
T ss_dssp CBSSSSCSSCTTSGGGCCTTHHHHHHHH
T ss_pred ccccccccccccccccCCchHHHHHHHH
Confidence 1 1123567788899999999884
No 35
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=98.76 E-value=1.1e-08 Score=73.46 Aligned_cols=79 Identities=16% Similarity=0.264 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc----cccccCCccc-hhHHHH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID----TDSIYNGFKD-NVRLMW 126 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~----~~~~~~g~~~-~~~~~w 126 (137)
+..++..+.++.++||+++++++|+.+.++++||+.+++++.+ ..|.+++..+.... ....+.|++. .+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 4567888999999999999999999999999999999999964 24544443222111 0234456544 589999
Q ss_pred HHhhhh
Q 039142 127 ERFLSC 132 (137)
Q Consensus 127 ~~~r~~ 132 (137)
+.+|+.
T Consensus 87 ~~~Rr~ 92 (456)
T 3mdm_A 87 HKQRRV 92 (456)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999884
No 36
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=98.73 E-value=2.6e-08 Score=71.30 Aligned_cols=99 Identities=16% Similarity=0.125 Sum_probs=67.3
Q ss_pred cCCCCCCCCCCCCccc--cccccC----CCCChHHHHHHHHHhcC--CeEEEe-eCCcCEEEEeCHHHHHHHHHhccccc
Q 039142 29 RNNTKLPPGPWGLPFI--GNLHQF----DVSKPQVSFWELSRKYG--PLMSLR-LGFVPSLVVSSAKLAKEILKTHDLQF 99 (137)
Q Consensus 29 ~~~~~~~p~p~~~p~~--G~~~~~----~~~~~~~~~~~~~~~~g--~~~~~~-~g~~~~i~v~~p~~i~~vl~~~~~~~ 99 (137)
..+.+.||+|++.|.. +.+..+ ...+++..+.++. +|| ++++++ +| +.++++||+.+++++.+ ...|
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG--GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG--CEEEECSHHHHHHHHHC-TTTE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC-cccc
Confidence 4556788899888764 433211 1346788888884 799 999988 55 68999999999999964 4578
Q ss_pred cCCCCcccccccccccCC-ccchhHHHHHHhhhh
Q 039142 100 CSRPALDGKIDTDSIYNG-FKDNVRLMWERFLSC 132 (137)
Q Consensus 100 ~~~~~~~~~~~~~~~~~g-~~~~~~~~w~~~r~~ 132 (137)
++++....... ...+.+ +...+|+.|+.+|+.
T Consensus 83 ~~~~~~~~~~~-~~~~~~~l~~~~g~~~~~~R~~ 115 (415)
T 2zwu_A 83 SSECPFIPREA-GEAYDFIPTSMDPPEQRQFRAL 115 (415)
T ss_dssp ETTSCSSSHHH-HHHCCCTTTTCCTTTTHHHHHH
T ss_pred CCCcccCCCCc-cccccccCccCCCcHHHHHHHH
Confidence 88762222111 223456 778889999998874
No 37
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=98.72 E-value=1.3e-08 Score=71.94 Aligned_cols=79 Identities=20% Similarity=0.186 Sum_probs=58.9
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCC----cCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGF----VPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWE 127 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~----~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~ 127 (137)
..+++..+.++ ++||++++++.++ .+.++++||+.+++++ ++...|++++.............+++..+++.|+
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 88 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAIL-ADHERFSSMRPVDDEADRALLPGILQAYDPPDHT 88 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHH-HCTTTEECSCCCC-----CCCTTCGGGCCTTHHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHH-hCchhccCCccccccccccccccccccCCChhHH
Confidence 46678888888 5999999999887 8999999999999999 5557888887654332212334557888999999
Q ss_pred Hhhhh
Q 039142 128 RFLSC 132 (137)
Q Consensus 128 ~~r~~ 132 (137)
++|+.
T Consensus 89 ~~R~~ 93 (384)
T 3oo3_A 89 RLRRT 93 (384)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99884
No 38
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=98.70 E-value=3.4e-08 Score=70.36 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=56.2
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCC---ccc---ccccc-cccCCccchhH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPA---LDG---KIDTD-SIYNGFKDNVR 123 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~---~~~---~~~~~-~~~~g~~~~~~ 123 (137)
..+++..+.++ ++||+++++++ |+.+.++++||+.+++++.++ .|++++. ... ..... ....|++..+|
T Consensus 23 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 99 (408)
T 3abb_A 23 PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDP--RLSSDWGHPDFPVVVRRTEDRGGLAFPLIGVDD 99 (408)
T ss_dssp TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCT--TEECCTTSTTCCCCC---------CCTTTTCCT
T ss_pred ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCC--CcccccccccccccccCCccccccccccccCCc
Confidence 46778889999 89999999998 788999999999999999764 3444432 111 11100 12346778899
Q ss_pred HHHHHhhhh
Q 039142 124 LMWERFLSC 132 (137)
Q Consensus 124 ~~w~~~r~~ 132 (137)
+.|+++|+.
T Consensus 100 ~~h~~~R~~ 108 (408)
T 3abb_A 100 PVHARQRRM 108 (408)
T ss_dssp THHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999999884
No 39
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=98.67 E-value=5.8e-08 Score=69.75 Aligned_cols=97 Identities=18% Similarity=0.015 Sum_probs=66.5
Q ss_pred CCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEe--------eCCcCEEEEeCHHHHHHHHHhccccccCCCC
Q 039142 33 KLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLR--------LGFVPSLVVSSAKLAKEILKTHDLQFCSRPA 104 (137)
Q Consensus 33 ~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~--------~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~ 104 (137)
..|+.|.+..++...... ..+++..+.++ ++||+++.+. +|+.+.+++++|+.+++++.+ ...|++++.
T Consensus 18 ~~p~~~~~~~~~~~~~~~-~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~-~~~fs~~~~ 94 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYA-ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRH-SDVFSSYEN 94 (433)
T ss_dssp --CCCCTTCCTTCHHHHT-TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHC-TTTEESTTT
T ss_pred CCCCCCCCCCCCCHHHhh-cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcC-hhhccCCcc
Confidence 344555555544433222 34688888888 7899999998 455789999999999999964 457887765
Q ss_pred ccccc--------ccccccCCccchhHHHHHHhhhh
Q 039142 105 LDGKI--------DTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 105 ~~~~~--------~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
..... .....+.+++..+++.|+++|+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~ 130 (433)
T 3ivy_A 95 GVIPRFKNDIAREDIEVQRFVMLNMDAPHHTRLRKI 130 (433)
T ss_dssp CSCCCCCTTCCHHHHHGGGGSGGGCCTTHHHHHHHH
T ss_pred cccccccccccccccccccCCccccChHHHHHHHHH
Confidence 43221 11233457889999999999984
No 40
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=98.64 E-value=4.3e-08 Score=69.60 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=60.6
Q ss_pred CCChHHHHHHHHHhc--CCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHh
Q 039142 52 VSKPQVSFWELSRKY--GPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERF 129 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~--g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~ 129 (137)
..+++..+.++.++| |++++++.++ +.++++||+.+++++ ++.+.|++++.............+....+|+.|+.+
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 95 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVI-QNTKAFSNKGVTFPRYETGEFELMMAGQDDPVHKKY 95 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHH-TCCSSEEGGGCSSSCC----CCCTTTTCCTTHHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHH-hChhhccCCcccccCCCCcccccCcccCCchHHHHH
Confidence 567899999999999 9999999885 589999999999999 455688887665432221222235688899999999
Q ss_pred hhh
Q 039142 130 LSC 132 (137)
Q Consensus 130 r~~ 132 (137)
|+.
T Consensus 96 R~~ 98 (398)
T 4fb2_A 96 RQL 98 (398)
T ss_dssp HHH
T ss_pred HHH
Confidence 884
No 41
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=98.61 E-value=3.9e-08 Score=70.48 Aligned_cols=95 Identities=11% Similarity=0.011 Sum_probs=66.7
Q ss_pred CCCCCCCCCCCccccccccCC---C-CChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCC-
Q 039142 31 NTKLPPGPWGLPFIGNLHQFD---V-SKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPA- 104 (137)
Q Consensus 31 ~~~~~p~p~~~p~~G~~~~~~---~-~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~- 104 (137)
+++.||| ++|++.+.. . .+++..+.++++ ||+++.++. |+.+.+++++|+.+++++.++ ..|++++.
T Consensus 4 ~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~~ 76 (428)
T 1cpt_A 4 RATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEGS 76 (428)
T ss_dssp TCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSSC
T ss_pred ccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCcccc
Confidence 3455666 889865542 1 346777888766 799999998 678999999999999999654 57888765
Q ss_pred cccccccc---c---c------cCCccchhHHHHHHhhhh
Q 039142 105 LDGKIDTD---S---I------YNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 105 ~~~~~~~~---~---~------~~g~~~~~~~~w~~~r~~ 132 (137)
........ . . ..++...+|+.|+++|+.
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~g~~~~~~Rr~ 116 (428)
T 1cpt_A 77 EILYDQNNEAFMRSISGGCPHVIDSLTSMDPPTHTAYRGL 116 (428)
T ss_dssp SSCCCHHHHHHHHHHTTTSSCSSCCGGGCCTTHHHHHHHH
T ss_pred ccCCcccccchhccccccccccccccccCChHHHHHHHHH
Confidence 22110000 1 2 246778899999999884
No 42
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=98.60 E-value=9.6e-08 Score=68.00 Aligned_cols=78 Identities=9% Similarity=-0.002 Sum_probs=58.0
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCC--c-cccccc-c-cccCCccchhHHH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPA--L-DGKIDT-D-SIYNGFKDNVRLM 125 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~--~-~~~~~~-~-~~~~g~~~~~~~~ 125 (137)
..+++..+.++ ++||+++++++ |+.+.++++||+.+++++.++ .|++++. . ...... . ..+.|+...+|+.
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 94 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLWQDEPE 94 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTTCCTTH
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--CcccccccccccccccccccccccccccCCchh
Confidence 45677778888 89999999998 889999999999999999864 5766642 1 111001 1 1345677889999
Q ss_pred HHHhhhh
Q 039142 126 WERFLSC 132 (137)
Q Consensus 126 w~~~r~~ 132 (137)
|+++|+.
T Consensus 95 h~~~R~~ 101 (403)
T 3aba_A 95 HTSDRKL 101 (403)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999884
No 43
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=98.58 E-value=1e-07 Score=67.69 Aligned_cols=78 Identities=14% Similarity=0.039 Sum_probs=60.9
Q ss_pred CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc----ccccccCCccchhHHHHHH
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI----DTDSIYNGFKDNVRLMWER 128 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~w~~ 128 (137)
.+++..+.++ ++||++++++.++.+.+++++|+.+++++.++ ..|++++...... .....+.+++..+|+.|++
T Consensus 13 ~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h~~ 90 (404)
T 3ejb_B 13 KNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQNQPDHRR 90 (404)
T ss_dssp HCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCCTTHHHH
T ss_pred cCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcCCchHHH
Confidence 5678888887 58999999999999999999999999999876 5787776422111 0123456788899999999
Q ss_pred hhhh
Q 039142 129 FLSC 132 (137)
Q Consensus 129 ~r~~ 132 (137)
+|+.
T Consensus 91 ~Rr~ 94 (404)
T 3ejb_B 91 LRTL 94 (404)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9884
No 44
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=98.57 E-value=1.6e-07 Score=66.89 Aligned_cols=78 Identities=17% Similarity=0.089 Sum_probs=60.5
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc--c----ccc---cc--c---cccCC
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL--D----GKI---DT--D---SIYNG 117 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~--~----~~~---~~--~---~~~~g 117 (137)
..+++..+.++ ++||+++++++|+.+.+++++|+.+++++.++ .|++++.. . ... .. . ..+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 46788899999 99999999999999999999999999999875 67776543 2 110 11 1 13567
Q ss_pred ccchhHHHHHHhhhh
Q 039142 118 FKDNVRLMWERFLSC 132 (137)
Q Consensus 118 ~~~~~~~~w~~~r~~ 132 (137)
+...+++.|+++|+.
T Consensus 90 l~~~~g~~h~~~R~~ 104 (404)
T 1z8o_A 90 MGTSDPPTHTRLRKL 104 (404)
T ss_dssp GGGCCTTHHHHHHHH
T ss_pred cccCCCcHHHHHHHH
Confidence 788899999999884
No 45
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=98.56 E-value=1.3e-07 Score=67.60 Aligned_cols=78 Identities=12% Similarity=-0.029 Sum_probs=60.2
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc-c----ccccccccCCccchhHHHH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD-G----KIDTDSIYNGFKDNVRLMW 126 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~-~----~~~~~~~~~g~~~~~~~~w 126 (137)
..+++..+.++ ++||+++++++++.+.+++++|+.+++++.++. |++++... . .......+.++...+|+.|
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~h 95 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMDPPDH 95 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCCTTHH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCCchHH
Confidence 46788889998 899999999999889999999999999998753 87765432 1 0011223566788899999
Q ss_pred HHhhhh
Q 039142 127 ERFLSC 132 (137)
Q Consensus 127 ~~~r~~ 132 (137)
+++|+.
T Consensus 96 ~~~R~~ 101 (411)
T 3a4g_A 96 TRLRKL 101 (411)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999884
No 46
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=98.52 E-value=1.6e-07 Score=66.95 Aligned_cols=86 Identities=9% Similarity=-0.045 Sum_probs=60.9
Q ss_pred CCCCCCCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI 109 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~ 109 (137)
.....+|||+. ..+++..+.++++ ||++ +.++.+.+++++|+.+++++.++ ..|++++... ..
T Consensus 16 ~pl~~~PGp~~-----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~~~-~~ 78 (411)
T 2jjn_A 16 TTIDEVPGMAD-----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPTRV-IE 78 (411)
T ss_dssp -CCCSCCCSSC-----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGGGG-ST
T ss_pred CCCCCCCCccc-----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCccccc-CC
Confidence 45566677761 2457778888876 9998 67777899999999999999764 4788776432 11
Q ss_pred ccccccCCccchhHHHHHHhhhh
Q 039142 110 DTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 110 ~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
.....+.++...+|+.|+.+|+.
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~R~~ 101 (411)
T 2jjn_A 79 GASPTPGMIHEIDPPEHRALRKV 101 (411)
T ss_dssp TCCCCTTCGGGCCTTHHHHHHHH
T ss_pred cccccccccccCCchHHHHHHHH
Confidence 11123456778899999999874
No 47
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=98.50 E-value=1.7e-07 Score=67.10 Aligned_cols=78 Identities=14% Similarity=0.108 Sum_probs=58.6
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCCc-cccccc-c-cccCCccchhHHHHH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPAL-DGKIDT-D-SIYNGFKDNVRLMWE 127 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~-~~~~~~-~-~~~~g~~~~~~~~w~ 127 (137)
..+++..+.++ ++||+++++++ |+.+.++++||+.+++++.++ .|++++.. ...... . ..+.++...+|+.|+
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h~ 112 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMDPPEHS 112 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCCTTHHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCCchHHH
Confidence 45678889998 89999999997 789999999999999999864 46665432 111111 1 134567888999999
Q ss_pred Hhhhh
Q 039142 128 RFLSC 132 (137)
Q Consensus 128 ~~r~~ 132 (137)
++|+.
T Consensus 113 ~~R~~ 117 (417)
T 2y5n_A 113 RLRRL 117 (417)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99884
No 48
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=98.48 E-value=8.9e-08 Score=69.05 Aligned_cols=51 Identities=18% Similarity=0.296 Sum_probs=41.6
Q ss_pred CCCCCCCCCCCCccccccccCC----CC-ChHHHHHHHHHhcCC-eEEEeeCCcCEE
Q 039142 30 NNTKLPPGPWGLPFIGNLHQFD----VS-KPQVSFWELSRKYGP-LMSLRLGFVPSL 80 (137)
Q Consensus 30 ~~~~~~p~p~~~p~~G~~~~~~----~~-~~~~~~~~~~~~~g~-~~~~~~g~~~~i 80 (137)
.+.+.+|||.++|++|++.++. .. +++.++.++.++||+ +|++++++.+.+
T Consensus 6 ~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v 62 (473)
T 3dan_A 6 KPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFV 62 (473)
T ss_dssp SCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTT
T ss_pred CCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCcc
Confidence 4567789999999999998752 34 678899999999999 999999755443
No 49
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=98.46 E-value=4.5e-07 Score=64.24 Aligned_cols=78 Identities=6% Similarity=-0.144 Sum_probs=59.0
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhh
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLS 131 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~ 131 (137)
..+++..+.+++++ |+++++..++ +.++++||+.+++++.+. +.|++++...........+.+++..+|+.|+++|+
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~g~~h~~~R~ 99 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQDGAEHKAFRT 99 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTCCHHHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCccccCCcHHHHHHH
Confidence 46789999999999 9999998874 588899999999999554 58888763322111122234678899999999988
Q ss_pred h
Q 039142 132 C 132 (137)
Q Consensus 132 ~ 132 (137)
.
T Consensus 100 ~ 100 (396)
T 3oft_A 100 P 100 (396)
T ss_dssp H
T ss_pred H
Confidence 4
No 50
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=98.43 E-value=7.3e-07 Score=63.67 Aligned_cols=78 Identities=12% Similarity=0.100 Sum_probs=59.4
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeC-CcCEEEEeCHHHHHHHHHhccccccCCCCc---ccccccc----cccCCccchhH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLG-FVPSLVVSSAKLAKEILKTHDLQFCSRPAL---DGKIDTD----SIYNGFKDNVR 123 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g-~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~---~~~~~~~----~~~~g~~~~~~ 123 (137)
..+++..+.+++++ |++++++++ +.+.+++++|+.+++++.++ .|++++.. ....... ..+.|++..+|
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 104 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTDA 104 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCCH
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcCC
Confidence 46788889999988 999999987 47899999999999999875 67665432 2211100 23457888999
Q ss_pred HHHHHhhhh
Q 039142 124 LMWERFLSC 132 (137)
Q Consensus 124 ~~w~~~r~~ 132 (137)
+.|+++|+.
T Consensus 105 ~~h~~~R~~ 113 (417)
T 3tyw_A 105 PEHTRYRRM 113 (417)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 999999984
No 51
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=98.43 E-value=7.8e-07 Score=63.59 Aligned_cols=78 Identities=10% Similarity=-0.010 Sum_probs=57.4
Q ss_pred CChHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhh
Q 039142 53 SKPQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLS 131 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~ 131 (137)
.+++.++.++++++| +++.+..++ +.++++||+.+++++ ++.+.|++++...........+.+++..+|+.|+++|+
T Consensus 38 ~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl-~~~~~f~~~~~~~~~~~~~~~~~~~~~~dg~~h~~~R~ 115 (421)
T 3lxh_A 38 QGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIY-RSPERFSSRVIWVPREAGEAYDMVPTKLDPPEHTPYRK 115 (421)
T ss_dssp GCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHH-TCTTTEETTCCSSSHHHHHHCCCTTTTCCTTTHHHHHH
T ss_pred cChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHH-cChhhccCCcccCCcccccccccCCccCCcHHHHHHHH
Confidence 578888988887765 899988776 588999999999999 45568888764322111122234678889999999988
Q ss_pred h
Q 039142 132 C 132 (137)
Q Consensus 132 ~ 132 (137)
.
T Consensus 116 ~ 116 (421)
T 3lxh_A 116 A 116 (421)
T ss_dssp H
T ss_pred H
Confidence 4
No 52
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=98.43 E-value=3.2e-07 Score=65.35 Aligned_cols=78 Identities=14% Similarity=0.082 Sum_probs=57.4
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCC--ccc---ccc---c-c-cccCCccch
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA--LDG---KID---T-D-SIYNGFKDN 121 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~--~~~---~~~---~-~-~~~~g~~~~ 121 (137)
..+++..+.++ ++||+++++++++.+.++++||+.+++++.++. +++++. ... ... . . ..+.+++..
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMFTA 90 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGGGC
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccccc
Confidence 56788899999 999999999998889999999999999997643 333331 110 100 0 0 023568888
Q ss_pred hHHHHHHhhhh
Q 039142 122 VRLMWERFLSC 132 (137)
Q Consensus 122 ~~~~w~~~r~~ 132 (137)
+|+.|+++|+.
T Consensus 91 ~g~~h~~~R~~ 101 (408)
T 1odo_A 91 YGPNHRKLRRL 101 (408)
T ss_dssp CHHHHHHHHHT
T ss_pred CChHHHHHHHH
Confidence 99999999884
No 53
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=98.41 E-value=4.2e-07 Score=64.81 Aligned_cols=78 Identities=10% Similarity=-0.040 Sum_probs=57.4
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCC--ccchhH-----
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNG--FKDNVR----- 123 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~----- 123 (137)
..+++..+.++ ++||+++++++ ++.+.++++||+.+++++.++ .|++++...........+.+ +...+|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 101 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVRSPFLDLLISDADAESG 101 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSCCHHHHTTCBCSCHHHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccccccccceeeCCCCCCC
Confidence 45677888888 89999999997 788999999999999999764 47666543211110112334 677788
Q ss_pred -HHHHHhhhh
Q 039142 124 -LMWERFLSC 132 (137)
Q Consensus 124 -~~w~~~r~~ 132 (137)
+.|+++|+.
T Consensus 102 ~~~h~~~R~~ 111 (404)
T 2xbk_A 102 RRQHAETRRL 111 (404)
T ss_dssp HHHHHHHHHH
T ss_pred CchHHHHHHH
Confidence 999999884
No 54
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=98.41 E-value=5.4e-07 Score=64.37 Aligned_cols=78 Identities=17% Similarity=0.070 Sum_probs=58.8
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCCccccc---cc-cc-----ccCC-ccc
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI---DT-DS-----IYNG-FKD 120 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~---~~-~~-----~~~g-~~~ 120 (137)
..+++..+.++. +||+++++++ |+.+.++++||+.+++++.++ .|++++...... .. .. .+.| +..
T Consensus 21 ~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 97 (413)
T 2z36_A 21 PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFPLFTLDAATLQQLRSQPPLMLG 97 (413)
T ss_dssp TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCCCSSCCHHHHHHHTTSCCCGGG
T ss_pred ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCccccccccccccccccccccccc
Confidence 456778888886 7899999998 788999999999999999863 677765432211 01 22 1566 788
Q ss_pred hhHHHHHHhhhh
Q 039142 121 NVRLMWERFLSC 132 (137)
Q Consensus 121 ~~~~~w~~~r~~ 132 (137)
.+|+.|+++|+.
T Consensus 98 ~~g~~h~~~R~~ 109 (413)
T 2z36_A 98 MDGAEHSAARRP 109 (413)
T ss_dssp CCHHHHHHHHHH
T ss_pred cCchHHHHHHHH
Confidence 899999999884
No 55
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=98.29 E-value=2.1e-06 Score=61.28 Aligned_cols=78 Identities=19% Similarity=0.129 Sum_probs=57.1
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCC-Cccccc--cc-c---c----c-cCCc
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRP-ALDGKI--DT-D---S----I-YNGF 118 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~-~~~~~~--~~-~---~----~-~~g~ 118 (137)
..+++..+.++ ++||+++++++ |+.+.++++||+.+++++.++. +++++ ...... .. . . . +.++
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccccc
Confidence 56788889998 99999999998 8889999999999999998653 43333 111100 00 0 0 2 3567
Q ss_pred cchhHHHHHHhhhh
Q 039142 119 KDNVRLMWERFLSC 132 (137)
Q Consensus 119 ~~~~~~~w~~~r~~ 132 (137)
...+|+.|+++|+.
T Consensus 93 ~~~~g~~h~~~R~~ 106 (411)
T 1gwi_A 93 LTVDGAEHRRLRTL 106 (411)
T ss_dssp GGCCHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHH
Confidence 88899999999884
No 56
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=98.28 E-value=3.6e-06 Score=60.18 Aligned_cols=78 Identities=10% Similarity=-0.033 Sum_probs=57.5
Q ss_pred CChHHHHHHHHHhcCCeEEEe-eCC-cCEEEEeCHHHHHHHHHhccccccCCCCccccccccc---c-cCCccchhHHHH
Q 039142 53 SKPQVSFWELSRKYGPLMSLR-LGF-VPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDS---I-YNGFKDNVRLMW 126 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~-~g~-~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~---~-~~g~~~~~~~~w 126 (137)
.+++..+.++++ ||+++.+. .|. .+.+++++|+.+++++.+ .+.|++++.......... . +.++...+++.|
T Consensus 37 ~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~-~~~fs~~~~~~~~~~~~~~~~~~~~~l~~~dg~~h 114 (415)
T 3mgx_A 37 LERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAP-SAPLTSEYGMMIGFDRDHPDNSGGRMMVVSEHEQH 114 (415)
T ss_dssp TTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCT-TSSEECTTCSSTTCCSSSCCTTTTTSGGGCCHHHH
T ss_pred CChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhC-hhhhcCCccccccccccccccccCCCccccCcHHH
Confidence 478888888877 89999986 453 789999999999999954 457877765332211111 1 445888999999
Q ss_pred HHhhhh
Q 039142 127 ERFLSC 132 (137)
Q Consensus 127 ~~~r~~ 132 (137)
+++|+.
T Consensus 115 ~~~R~~ 120 (415)
T 3mgx_A 115 RKLRKL 120 (415)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999984
No 57
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=98.27 E-value=2e-06 Score=61.62 Aligned_cols=77 Identities=9% Similarity=-0.023 Sum_probs=56.4
Q ss_pred CChHHHHHHHHHhcCCeEEEeeC--CcCEEEEeCHHHHHHHHHhccccccCCCCc--------cc-ccc----c-ccccC
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLG--FVPSLVVSSAKLAKEILKTHDLQFCSRPAL--------DG-KID----T-DSIYN 116 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g--~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~--------~~-~~~----~-~~~~~ 116 (137)
.+++..+.++. +||+++++++| +.+.++++||+.+++++.++ .|++++.. .. ... . ...+.
T Consensus 20 ~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (425)
T 2z3t_A 20 ADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVEN 96 (425)
T ss_dssp HCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHTT
T ss_pred cChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccccc
Confidence 45777888875 59999999987 77899999999999999864 78877642 11 100 0 12236
Q ss_pred CccchhHHHHHHhhhh
Q 039142 117 GFKDNVRLMWERFLSC 132 (137)
Q Consensus 117 g~~~~~~~~w~~~r~~ 132 (137)
|+...+|+.|+++|+.
T Consensus 97 ~l~~~dg~~h~~~R~~ 112 (425)
T 2z3t_A 97 WLVFLDPPHHTELRSL 112 (425)
T ss_dssp CGGGCCHHHHHHHHHH
T ss_pred ccccCCchHHHHHHHH
Confidence 7778899999999884
No 58
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=98.24 E-value=1.1e-06 Score=63.23 Aligned_cols=78 Identities=10% Similarity=-0.022 Sum_probs=57.1
Q ss_pred CChHHHHHHHHHhcCCeEEEeeC-------CcCEEEEeCHHHHHHHHHhccccccCCCCc--ccccc-cccccCCccchh
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLG-------FVPSLVVSSAKLAKEILKTHDLQFCSRPAL--DGKID-TDSIYNGFKDNV 122 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g-------~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~--~~~~~-~~~~~~g~~~~~ 122 (137)
.+++..+.+++ +||+++.++.+ +.+.++++||+.+++++.++ ..|++++.. ..... ....+.|+...+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d 121 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD 121 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence 35677788885 68999999986 56899999999999999875 478887642 11111 111245677788
Q ss_pred HHHHHHhhhh
Q 039142 123 RLMWERFLSC 132 (137)
Q Consensus 123 ~~~w~~~r~~ 132 (137)
|+.|+.+|+.
T Consensus 122 g~~h~~~R~~ 131 (435)
T 2wm5_A 122 DPRHQRLRSI 131 (435)
T ss_dssp TTHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999999884
No 59
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=98.21 E-value=2e-06 Score=61.42 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=56.1
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCC----ccc-c-c-c-cccc-cCCccchh
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA----LDG-K-I-D-TDSI-YNGFKDNV 122 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~----~~~-~-~-~-~~~~-~~g~~~~~ 122 (137)
..+++..+.++ ++||++++ + ++.+.++++||+.+++++.++. |++++. ... . . . .... +.++...+
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 99 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGLP 99 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTSC
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccCC
Confidence 46788888888 78999999 6 7778999999999999998763 887762 111 1 0 1 0112 45677889
Q ss_pred HHHHHHhhhh
Q 039142 123 RLMWERFLSC 132 (137)
Q Consensus 123 ~~~w~~~r~~ 132 (137)
++.|+++|+.
T Consensus 100 g~~h~~~R~~ 109 (419)
T 1q5d_A 100 PEDHARVRKL 109 (419)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 9999999884
No 60
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=98.19 E-value=2.1e-06 Score=61.29 Aligned_cols=79 Identities=15% Similarity=0.057 Sum_probs=57.1
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCC--cCEEEEeCHHHHHHHHHhccccccCCCCccccc-cc-cc--c-cCCccchhHH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGF--VPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI-DT-DS--I-YNGFKDNVRL 124 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~--~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~-~~-~~--~-~~g~~~~~~~ 124 (137)
+.+++..+.++. +||+++++++++ .+.+++++|+.+++++.+ ..|++++...... .. .. . +.++...+++
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~ 102 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLAFADQP 102 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCSTTCCTT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccccCCch
Confidence 455668888876 899999999765 789999999999999975 3676654332111 01 12 2 4567888999
Q ss_pred HHHHhhhhc
Q 039142 125 MWERFLSCQ 133 (137)
Q Consensus 125 ~w~~~r~~~ 133 (137)
.|+++|+.-
T Consensus 103 ~h~~~R~~~ 111 (411)
T 2dkk_A 103 DHNRLRRAV 111 (411)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998843
No 61
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=98.17 E-value=4.8e-06 Score=59.04 Aligned_cols=73 Identities=7% Similarity=-0.027 Sum_probs=55.0
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhh
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLS 131 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~ 131 (137)
..+++..+.++.+ ||+++++ +. +.++++||+.+++++.++. .|++++... . . ...+.++...+|+.|+++|+
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~--~~-~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~-~-~~~~~~l~~~~g~~h~~~R~ 88 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRD--RN-GLAAASTYQAVIDAERQPE-LFSNAGGIR-P-D-QPALPMMIDMDDPAHLLRRK 88 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEEC--TT-CCEEECSHHHHHHHHTCTT-TEESTTCSS-T-T-SCCCSSGGGCCTTHHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeec--CC-CeEEEecHHHHHHHHhCcc-cccCccccC-C-c-ccccccccccCchHHHHHHH
Confidence 3568888888877 9999854 44 7899999999999997643 788776432 1 1 22345678889999999988
Q ss_pred h
Q 039142 132 C 132 (137)
Q Consensus 132 ~ 132 (137)
.
T Consensus 89 ~ 89 (398)
T 2xkr_A 89 L 89 (398)
T ss_dssp H
T ss_pred H
Confidence 4
No 62
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=98.16 E-value=1.9e-06 Score=62.17 Aligned_cols=76 Identities=14% Similarity=0.008 Sum_probs=57.4
Q ss_pred hHHHHHHHHHhcCCeE--EEe-eCCcCEEEEeCHHHHHHHHHhccccccCCCCccccccc-------------ccccCCc
Q 039142 55 PQVSFWELSRKYGPLM--SLR-LGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDT-------------DSIYNGF 118 (137)
Q Consensus 55 ~~~~~~~~~~~~g~~~--~~~-~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~-------------~~~~~g~ 118 (137)
++..+.++ ++||+++ .++ .|+.+.+++++++.+++++.+. ..|++++........ ...+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 66677777 6789999 888 6778999999999999999665 678887754332110 1233578
Q ss_pred cchhHHHHHHhhhh
Q 039142 119 KDNVRLMWERFLSC 132 (137)
Q Consensus 119 ~~~~~~~w~~~r~~ 132 (137)
+..+++.|+++|+.
T Consensus 125 ~~~dg~~h~~~R~~ 138 (450)
T 3tkt_A 125 VQMDAPKHPKLRRL 138 (450)
T ss_dssp GGCCTTHHHHHHHH
T ss_pred ccCCCHHHHHHHHH
Confidence 88999999999984
No 63
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=98.12 E-value=3.1e-06 Score=60.48 Aligned_cols=76 Identities=13% Similarity=0.037 Sum_probs=56.3
Q ss_pred CChHHHHHHHHHhcCCeE-----EEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc-ccc--cc-c-cccCCccchh
Q 039142 53 SKPQVSFWELSRKYGPLM-----SLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD-GKI--DT-D-SIYNGFKDNV 122 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~-----~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~-~~~--~~-~-~~~~g~~~~~ 122 (137)
.+++..+.++. +||+++ +++. .+.++++||+.+++++.++ ..|++++... ... .. . ..+.|+...+
T Consensus 25 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 100 (414)
T 2uuq_A 25 PNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQD 100 (414)
T ss_dssp TCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGCC
T ss_pred cCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccCC
Confidence 56788888874 689998 7766 6899999999999999876 5788876542 111 11 1 2245677789
Q ss_pred HHHHHHhhhh
Q 039142 123 RLMWERFLSC 132 (137)
Q Consensus 123 ~~~w~~~r~~ 132 (137)
|+.|+++|+.
T Consensus 101 g~~h~~~R~~ 110 (414)
T 2uuq_A 101 PPVHTEFRKL 110 (414)
T ss_dssp TTHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 9999999884
No 64
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=98.00 E-value=6.1e-06 Score=59.44 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=44.5
Q ss_pred CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccC-CccchhHHHHHHhhh
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYN-GFKDNVRLMWERFLS 131 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~w~~~r~ 131 (137)
.++..++.++ ++||+++++..++ .+++++|+.+++++.++. .|++++..... . ...+. +++..+++.|+++|+
T Consensus 53 ~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~-~-~~~~~~~l~~~dg~~h~~~Rr 126 (441)
T 3nc3_A 53 NNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERA-E-PVMRGPVLAQMHGKEHSAKRR 126 (441)
T ss_dssp HCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCC-C-CSCC-------------CCHH
T ss_pred cChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccc-c-cccCCCccccCCcHHHHHHHH
Confidence 4556667665 6899999887655 899999999999997764 48777654432 1 23334 378889999999887
Q ss_pred h
Q 039142 132 C 132 (137)
Q Consensus 132 ~ 132 (137)
.
T Consensus 127 ~ 127 (441)
T 3nc3_A 127 I 127 (441)
T ss_dssp H
T ss_pred H
Confidence 4
No 65
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=97.99 E-value=4.4e-06 Score=59.29 Aligned_cols=46 Identities=24% Similarity=0.292 Sum_probs=40.1
Q ss_pred CCChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhcccccc
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFC 100 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~ 100 (137)
..+++..+.++ ++||+++++++ |+.+.++++||+.+++++.++ .|+
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~ 61 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFS 61 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEE
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--Ccc
Confidence 45678889999 99999999998 788999999999999999764 465
No 66
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=97.94 E-value=7.7e-06 Score=58.27 Aligned_cols=76 Identities=16% Similarity=0.022 Sum_probs=53.5
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccc--------cccccCCccchhH
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKID--------TDSIYNGFKDNVR 123 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~ 123 (137)
..+++..+.++ ++||++++.+.| .+++++|+.+++++.+. ..+++++....... ....+.++...++
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg 102 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLDP 102 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCCT
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcCC
Confidence 56788888887 578999987776 89999999999999653 34455543221111 0123457888899
Q ss_pred HHHHHhhhh
Q 039142 124 LMWERFLSC 132 (137)
Q Consensus 124 ~~w~~~r~~ 132 (137)
+.|+++|+.
T Consensus 103 ~~h~~~R~~ 111 (418)
T 3r9b_A 103 PDHTRLRGL 111 (418)
T ss_dssp THHHHHHHH
T ss_pred chHHHHHHH
Confidence 999999884
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=97.91 E-value=1.1e-05 Score=57.16 Aligned_cols=71 Identities=18% Similarity=0.230 Sum_probs=45.7
Q ss_pred HHHHHhcCCeEEEeeC-Cc---CEEEEeCHHHHHHHHHhccccccCCCC------ccccccc--ccccCCccchhHHHHH
Q 039142 60 WELSRKYGPLMSLRLG-FV---PSLVVSSAKLAKEILKTHDLQFCSRPA------LDGKIDT--DSIYNGFKDNVRLMWE 127 (137)
Q Consensus 60 ~~~~~~~g~~~~~~~g-~~---~~i~v~~p~~i~~vl~~~~~~~~~~~~------~~~~~~~--~~~~~g~~~~~~~~w~ 127 (137)
.+++++ |++++++++ +. +.++++||+.+++++.++ ..|++++. ....... ...+.++...+|+.|+
T Consensus 20 ~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 97 (398)
T 1lfk_A 20 DELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDYDPPEHT 97 (398)
T ss_dssp HHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGCCTTHHH
T ss_pred HHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCccccCCHHHH
Confidence 346666 999999875 34 899999999999999444 35776654 1111111 1234567778899999
Q ss_pred Hhhhh
Q 039142 128 RFLSC 132 (137)
Q Consensus 128 ~~r~~ 132 (137)
++|+.
T Consensus 98 ~~R~~ 102 (398)
T 1lfk_A 98 RLRRK 102 (398)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99884
No 68
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=97.85 E-value=2.6e-05 Score=54.82 Aligned_cols=71 Identities=13% Similarity=-0.018 Sum_probs=49.9
Q ss_pred HHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcc--ccc----cccccc----CCccchhHHH
Q 039142 56 QVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALD--GKI----DTDSIY----NGFKDNVRLM 125 (137)
Q Consensus 56 ~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~--~~~----~~~~~~----~g~~~~~~~~ 125 (137)
+..+.++ ++||+++++. | .+++++|+.++++|.++ +.|++++... ... .....+ .|+...+|+.
T Consensus 2 ~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 75 (367)
T 3b4x_A 2 YDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSDPPL 75 (367)
T ss_dssp HHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCCTTH
T ss_pred CHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCCchh
Confidence 3456666 4799999887 4 78999999999999865 4787775321 110 102223 5677889999
Q ss_pred HHHhhhh
Q 039142 126 WERFLSC 132 (137)
Q Consensus 126 w~~~r~~ 132 (137)
|+++|+.
T Consensus 76 h~~~R~~ 82 (367)
T 3b4x_A 76 HDELRNL 82 (367)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999884
No 69
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=97.79 E-value=2.6e-05 Score=54.22 Aligned_cols=60 Identities=18% Similarity=0.072 Sum_probs=44.0
Q ss_pred HhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhhh
Q 039142 64 RKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 64 ~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
++||+++++ | .++++||+.+++++.++ ..|++++..... . . .+.++...+|+.|+++|+.
T Consensus 2 r~~gpv~~~--g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~-~-~-~~~~l~~~~g~~~~~~R~~ 61 (343)
T 2rfb_A 2 RLNDPVHYD--G---AWHVYKYSDVKHVLMND-KIFSSNPGNRYS-N-A-GGISFITMDNPEHKEFRDI 61 (343)
T ss_dssp -CCCCEEET--T---EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGCCHHHHHHHHHH
T ss_pred CCcCCeeee--C---eEEEcCHHHHHHHHhCh-hhcccCCcCCCC-C-c-cccccccCCchHHHHHHHH
Confidence 579999875 3 89999999999999875 478887632222 2 2 3466778899999999884
No 70
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=97.77 E-value=3.9e-05 Score=53.81 Aligned_cols=72 Identities=22% Similarity=0.169 Sum_probs=49.9
Q ss_pred HHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCC-----ccccc--c--ccccc-CCccchhHHH
Q 039142 56 QVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPA-----LDGKI--D--TDSIY-NGFKDNVRLM 125 (137)
Q Consensus 56 ~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~-----~~~~~--~--~~~~~-~g~~~~~~~~ 125 (137)
+..+.++ ++||+++++ | +.+++++|+.+++++.++ ..|++++. ..... . ..... .++...+|+.
T Consensus 2 ~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 75 (368)
T 1io7_A 2 YDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSDPPL 75 (368)
T ss_dssp HHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCCTTH
T ss_pred CHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCCChH
Confidence 3456666 589999976 4 588999999999999864 47888764 11010 1 11112 6677889999
Q ss_pred HHHhhhhc
Q 039142 126 WERFLSCQ 133 (137)
Q Consensus 126 w~~~r~~~ 133 (137)
|+++|+.-
T Consensus 76 h~~~R~~~ 83 (368)
T 1io7_A 76 HDELRSMS 83 (368)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHH
Confidence 99998843
No 71
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=97.74 E-value=8.4e-06 Score=57.78 Aligned_cols=74 Identities=12% Similarity=-0.042 Sum_probs=51.8
Q ss_pred CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCccccc------cc-ccccCCccchhHHH
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKI------DT-DSIYNGFKDNVRLM 125 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~------~~-~~~~~g~~~~~~~~ 125 (137)
.+++..+.++ ++||++++ + +.+.++++||+.+++++.+ ..|++++...... .. ...+.++...+|+.
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 86 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQDEPD 86 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGCCTTH
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccCCchh
Confidence 4567777766 58999998 6 4789999999999999975 3676553221110 01 11156677889999
Q ss_pred HHHhhhh
Q 039142 126 WERFLSC 132 (137)
Q Consensus 126 w~~~r~~ 132 (137)
|+++|+.
T Consensus 87 h~~~R~~ 93 (397)
T 3buj_A 87 HGRLRGV 93 (397)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999884
No 72
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=97.65 E-value=0.00016 Score=51.79 Aligned_cols=78 Identities=14% Similarity=0.030 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHhcCCeEEEee-CCcCEEEEeCHHHHHHHHHhccccccCCCC---cccc------cccccccCCccchh
Q 039142 53 SKPQVSFWELSRKYGPLMSLRL-GFVPSLVVSSAKLAKEILKTHDLQFCSRPA---LDGK------IDTDSIYNGFKDNV 122 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~-g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~---~~~~------~~~~~~~~g~~~~~ 122 (137)
.++...+.+++++ |+++.+.. ++.+.+++++++.+++++.+. ..|++++. .... ........++...+
T Consensus 38 ~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 115 (426)
T 3rwl_A 38 DSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAMD 115 (426)
T ss_dssp TCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCGGGCC
T ss_pred CCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcccccC
Confidence 4578888888876 99999987 456799999999999999765 46766541 1110 00122334678889
Q ss_pred HHHHHHhhhh
Q 039142 123 RLMWERFLSC 132 (137)
Q Consensus 123 ~~~w~~~r~~ 132 (137)
+..|+++|+.
T Consensus 116 g~~h~~~R~~ 125 (426)
T 3rwl_A 116 RPRHDEQRKA 125 (426)
T ss_dssp TTHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 9999999884
No 73
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=96.70 E-value=0.00048 Score=49.11 Aligned_cols=75 Identities=9% Similarity=-0.140 Sum_probs=50.4
Q ss_pred CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc-ccc------cccccccCCccchhHHH
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL-DGK------IDTDSIYNGFKDNVRLM 125 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~-~~~------~~~~~~~~g~~~~~~~~ 125 (137)
.++... +..++||+++.+..|+.. +++++++.++++|.++. +...... ... ......+.+++..+|+.
T Consensus 33 ~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~dg~~ 107 (416)
T 3p3o_A 33 NFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFLQSLDGAD 107 (416)
T ss_dssp TCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSGGGCCHHH
T ss_pred cCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCccccCCchH
Confidence 445555 455679999999887766 89999999999997653 3222110 000 00022345788999999
Q ss_pred HHHhhhh
Q 039142 126 WERFLSC 132 (137)
Q Consensus 126 w~~~r~~ 132 (137)
|+++|+.
T Consensus 108 h~~~Rr~ 114 (416)
T 3p3o_A 108 HRRLRGL 114 (416)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9999984
No 74
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=96.62 E-value=0.0056 Score=43.61 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=54.6
Q ss_pred CCccccccc---cCCCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCc--cccccc-cc
Q 039142 40 GLPFIGNLH---QFDVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPAL--DGKIDT-DS 113 (137)
Q Consensus 40 ~~p~~G~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~--~~~~~~-~~ 113 (137)
++|.+|-.+ .+ ..++...+.++++ +|+++ |.+.....++++++.++++|.+ ...|++.... ...... ..
T Consensus 19 ~~P~~~~dp~~~~~-~~dP~~~~~~lR~-~gPV~--~~~~~~~~~vt~~~~v~~vl~d-~~~fs~~~~~~~~~~~~~~~~ 93 (412)
T 4dnj_A 19 GVPHLGIDPFALDY-FADPYPEQETLRE-AGPVV--YLDKWNVYGVARYAEVYAVLND-PLTFCSSRGVGLSDFKKEKPW 93 (412)
T ss_dssp TSCEECCCTTSHHH-HHSCHHHHHHHHH-HCSSE--EETTTTEEEECSHHHHHHHHTC-TTTEESTTCSSSSCTTTSCCS
T ss_pred CCCccCCCCCCHHH-HhCcHHHHHHHHh-cCCEE--EECCCCEEEECCHHHHHHHHcC-CccccCCCccccccccccccc
Confidence 456665321 12 3567777777654 69986 5566778999999999999964 3456543321 111111 11
Q ss_pred cc-CCccchhHHHHHHhhhh
Q 039142 114 IY-NGFKDNVRLMWERFLSC 132 (137)
Q Consensus 114 ~~-~g~~~~~~~~w~~~r~~ 132 (137)
.. ..+...+|..|+++|+.
T Consensus 94 ~~~~~~~~~Dg~~H~r~R~~ 113 (412)
T 4dnj_A 94 RPPSLILEADPPAHTRTRAV 113 (412)
T ss_dssp SCCCTTTTCCTTHHHHHHHH
T ss_pred cCCCccccCChHHHHHHHhh
Confidence 22 24777889999988874
No 75
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=96.40 E-value=0.0016 Score=46.01 Aligned_cols=74 Identities=12% Similarity=0.037 Sum_probs=48.6
Q ss_pred CChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhhh
Q 039142 53 SKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLSC 132 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~~ 132 (137)
.+++..+.+++++ |+++....| .+++++++.+++++... .|++++...........+.++...+|+.|+++|+.
T Consensus 20 ~dp~~~~~~lr~~-~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~dg~~h~~~R~~ 93 (394)
T 2wiy_A 20 NNPYPWYRRLQQD-HPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSDPPHHTVLRRQ 93 (394)
T ss_dssp HCCHHHHHHHHHH-CSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCCTTHHHHHHHH
T ss_pred cCccHHHHHHHhc-CCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCCchHHHHHHHH
Confidence 3567778777655 799876543 68899999999999643 45543221111110122356788999999999885
No 76
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=94.27 E-value=0.011 Score=41.96 Aligned_cols=62 Identities=19% Similarity=0.321 Sum_probs=44.6
Q ss_pred CCC-CCCCccccccccC----CCCChHHHHHHHHHhcCCeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCC
Q 039142 35 PPG-PWGLPFIGNLHQF----DVSKPQVSFWELSRKYGPLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRP 103 (137)
Q Consensus 35 ~p~-p~~~p~~G~~~~~----~~~~~~~~~~~~~~~~g~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~ 103 (137)
||| ++++|++|+...+ ...++...+.+++++ ++++.. .+.+++++++.+++++.+ ..|++++
T Consensus 36 ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~ 102 (381)
T 2yjn_B 36 IRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRAT 102 (381)
T ss_dssp HHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSC
T ss_pred CCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCc
Confidence 455 3367899976431 145788888888876 887644 468999999999999976 3676654
No 77
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=90.67 E-value=1.9 Score=30.71 Aligned_cols=77 Identities=8% Similarity=-0.062 Sum_probs=42.6
Q ss_pred CChHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHhccccccCCCCcccccccccccCCccchhHHHHHHhhh
Q 039142 53 SKPQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKTHDLQFCSRPALDGKIDTDSIYNGFKDNVRLMWERFLS 131 (137)
Q Consensus 53 ~~~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~w~~~r~ 131 (137)
.+++..+.+++++.+ +++-.-.++ ...+++..+.+++|+.. .+.|++....................++..|+++|+
T Consensus 37 ~~~~~~~~~lr~~~~~~~~~~~~~g-g~W~vtr~~dv~~vl~d-~~~fs~~~~~~~~~~~~~~~~~~~~~D~p~H~r~Rr 114 (417)
T 4dxy_A 37 DGYHEAWKKVQHPGIPDLIWTPFTG-GHWIATNGDTVKEVYSD-PTRFSSEVIFLPKEAGEKAQMVPTKMDPPEHTPYRK 114 (417)
T ss_dssp GCHHHHHHHHSCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEESSCCSSSTTSSCSSCTTTTTCCTTTHHHHHH
T ss_pred cChHHHHHHHHhhCCCCEEecCCCC-CEEEECCHHHHHHHHcC-chhccCCCcccccccccccccCcccCCcHHHHHHHH
Confidence 456777777766543 344332333 46778999999999954 447766543222111111111244456666666665
No 78
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=70.67 E-value=8.1 Score=21.87 Aligned_cols=46 Identities=11% Similarity=0.145 Sum_probs=36.3
Q ss_pred cCCCCChHHHHHHHHHhcCCeEEEeeCCc-CEEEEeCHHHHHHHHHh
Q 039142 49 QFDVSKPQVSFWELSRKYGPLMSLRLGFV-PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-~~i~v~~p~~i~~vl~~ 94 (137)
.++..-...-+.+....||.+.--|+..+ ..+++.+|+.+++++..
T Consensus 22 ~FP~ewKt~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 68 (100)
T 1whv_A 22 TFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNT 68 (100)
T ss_dssp ECCTTCCHHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHH
T ss_pred eCChhhhhHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 33334445678888999999999999885 77778999999999974
No 79
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=65.48 E-value=3 Score=23.68 Aligned_cols=43 Identities=12% Similarity=0.119 Sum_probs=34.7
Q ss_pred CCChHHHHHHHHHhcCCeEEEeeCCc-CEEEEeCHHHHHHHHHh
Q 039142 52 VSKPQVSFWELSRKYGPLMSLRLGFV-PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~g~~-~~i~v~~p~~i~~vl~~ 94 (137)
..-...-+.++...||++.-.|+..+ ..+++.+|+.+++++..
T Consensus 15 ~ewKt~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~ 58 (101)
T 3ctr_A 15 KEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNT 58 (101)
T ss_dssp TTCCHHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred hhhhhHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHh
Confidence 33445667888889999988999885 77779999999999975
No 80
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=62.27 E-value=18 Score=20.08 Aligned_cols=59 Identities=14% Similarity=0.132 Sum_probs=38.2
Q ss_pred CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC--------cCEEEEeCHHHHHHHHHhccccccCC
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF--------VPSLVVSSAKLAKEILKTHDLQFCSR 102 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~--------~~~i~v~~p~~i~~vl~~~~~~~~~~ 102 (137)
--++|+++.- -..+.+.+...+||++..+.+.. .-.|.-.+++.++.++..+...+.++
T Consensus 13 ~lfV~~Lp~~---~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~~~~~~gr 79 (103)
T 1s79_A 13 SVYIKGFPTD---ATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKET 79 (103)
T ss_dssp CEEEECCCTT---CCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSSCCCCTTT
T ss_pred EEEEECCCCC---CCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcCCCEECCE
Confidence 3466777532 33455677788999988777531 24455689999999987544445443
No 81
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=60.59 E-value=15 Score=18.57 Aligned_cols=47 Identities=15% Similarity=0.197 Sum_probs=31.2
Q ss_pred hHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 55 PQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 55 ~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
..+.+.+...+||++..+.+.. .-.|.-.+++.++.++..+...+.+
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 67 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGL 67 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSSCCBTT
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCCCeECC
Confidence 3455677778899987776632 2345568899999988765444433
No 82
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.48 E-value=24 Score=19.75 Aligned_cols=63 Identities=17% Similarity=0.176 Sum_probs=43.9
Q ss_pred ccccccccCCCCC-hHHHHHHHHHhcC-CeEEEeeCCcCEEEEeCHHHHHHHHHh-ccccccCCCCc
Q 039142 42 PFIGNLHQFDVSK-PQVSFWELSRKYG-PLMSLRLGFVPSLVVSSAKLAKEILKT-HDLQFCSRPAL 105 (137)
Q Consensus 42 p~~G~~~~~~~~~-~~~~~~~~~~~~g-~~~~~~~g~~~~i~v~~p~~i~~vl~~-~~~~~~~~~~~ 105 (137)
-.++|+..-...+ ....+.++..+|| ++..+ .++.-.|.-.+.+.++..+.+ +...+-+|+-.
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~i~ 77 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNRII 77 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSCCE
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCceEE
Confidence 4478887552322 2345788999995 88777 467888889999999988865 44455565543
No 83
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=48.12 E-value=37 Score=19.35 Aligned_cols=70 Identities=13% Similarity=0.062 Sum_probs=41.8
Q ss_pred CCCCCCCccccccccCCC-------CChHHHHHHHHHhcCCeEEEeeCC-----cCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 35 PPGPWGLPFIGNLHQFDV-------SKPQVSFWELSRKYGPLMSLRLGF-----VPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 35 ~p~p~~~p~~G~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~g~-----~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
+|.|...-.+-|+..... .+..+-+.+...+||.+..+.+.. .-.|--.+++.+++.+.. ++..|.+
T Consensus 3 ~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~G 82 (114)
T 3s6e_A 3 QPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAG 82 (114)
T ss_dssp CCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred CCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 345555556667665421 112234555667889988877632 234446788888888765 5666766
Q ss_pred CCC
Q 039142 102 RPA 104 (137)
Q Consensus 102 ~~~ 104 (137)
|.-
T Consensus 83 R~i 85 (114)
T 3s6e_A 83 KMI 85 (114)
T ss_dssp EEC
T ss_pred EEE
Confidence 543
No 84
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=48.04 E-value=28 Score=17.93 Aligned_cols=59 Identities=14% Similarity=0.095 Sum_probs=38.5
Q ss_pred cccccccCCCCC----hHHHHHHHHHhcCCeEEEeeCC-------cCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 43 FIGNLHQFDVSK----PQVSFWELSRKYGPLMSLRLGF-------VPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 43 ~~G~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~g~-------~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
++||++.- ..+ ..+.+.+...+||++..+.+.. .-.|--.+++.++..+.. +...+.++
T Consensus 5 ~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~lng~~~~g~ 75 (81)
T 2krb_A 5 VVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQ 75 (81)
T ss_dssp EEESCCCC-CTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTTSSSCCCSSS
T ss_pred EEeCCCCC-cHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHHhcCcccCCc
Confidence 46777543 222 3467788889999998887652 234556899999988865 44444443
No 85
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=46.16 E-value=28 Score=17.47 Aligned_cols=47 Identities=11% Similarity=0.128 Sum_probs=30.7
Q ss_pred hHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 55 PQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 55 ~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
..+.+.+...+||++..+.+.. .-.|...+++.++.++.-+...+.+
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g 67 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 67 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSCCCSSS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCCCEECC
Confidence 3455677788899987776532 1334568899998888644444443
No 86
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=44.47 E-value=40 Score=18.68 Aligned_cols=65 Identities=22% Similarity=0.326 Sum_probs=42.1
Q ss_pred CCCCCCCccccccccCCCCChHHHHHHHHHhcCCeEEEee---CC---cCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 35 PPGPWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRL---GF---VPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 35 ~p~p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---g~---~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
+|.+...-++||+..- -..+.+.+...+||++..+.+ +. .-.|-..+++.+..++.. +...+.++
T Consensus 4 ~~~~~~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 75 (115)
T 3lqv_A 4 PPEVNRILYIRNLPYK---ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVDHLSGFNVSNR 75 (115)
T ss_dssp CTTCCSEEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHHHHTTCBSSSC
T ss_pred CCCCCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 4445555677887532 234457777889999887776 22 245567889988888874 44455444
No 87
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=43.81 E-value=27 Score=16.50 Aligned_cols=7 Identities=14% Similarity=0.045 Sum_probs=2.7
Q ss_pred HHHHHHH
Q 039142 19 FFALQRH 25 (137)
Q Consensus 19 ~~~~~~~ 25 (137)
++++.++
T Consensus 31 ~~~~~RR 37 (44)
T 2ks1_B 31 IGLFMRR 37 (44)
T ss_dssp HHHHHHT
T ss_pred HHHHhhh
Confidence 3344343
No 88
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=38.74 E-value=51 Score=18.30 Aligned_cols=68 Identities=16% Similarity=0.042 Sum_probs=41.6
Q ss_pred CCCCCCccccccccCC--CCChHHHHHHHHHhcCCeEEEeeCC----------cCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 36 PGPWGLPFIGNLHQFD--VSKPQVSFWELSRKYGPLMSLRLGF----------VPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 36 p~p~~~p~~G~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~g~----------~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
+.|...-++.|+.... ..+..+-+.+...+||.+-.+.+.. .-.|--.+++.+.+...+ ++..|.+|
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 4455566677776321 2334566777788999987776521 123446788888888765 56666655
Q ss_pred C
Q 039142 103 P 103 (137)
Q Consensus 103 ~ 103 (137)
+
T Consensus 85 ~ 85 (105)
T 2pe8_A 85 V 85 (105)
T ss_dssp E
T ss_pred E
Confidence 4
No 89
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=37.46 E-value=55 Score=18.28 Aligned_cols=60 Identities=8% Similarity=-0.007 Sum_probs=39.4
Q ss_pred CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC--cCEEEEeCHHHHHHHHHh-ccccccCCC
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF--VPSLVVSSAKLAKEILKT-HDLQFCSRP 103 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~--~~~i~v~~p~~i~~vl~~-~~~~~~~~~ 103 (137)
--++||+..-.. .+.+.+...+||++..+.+.. .-.|...+++.+++++.. +...+..+.
T Consensus 18 ~l~V~nLp~~~t---~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr~ 80 (115)
T 3beg_B 18 RVVVSGLPPSGS---WQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE 80 (115)
T ss_dssp CEEEEECCSSCC---TTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCTT
T ss_pred EEEEeCCCCCCC---HHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCcE
Confidence 346688764322 234566778999998887743 355667899999988874 445555544
No 90
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=36.60 E-value=53 Score=17.84 Aligned_cols=57 Identities=23% Similarity=0.125 Sum_probs=36.4
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC-----c----CEEEEeCHHHHHHHHHh-ccccccC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF-----V----PSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~-----~----~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
-++||++.- -..+.+.+..++||++..+.+.. . -.|--.+++.++.++.. +...+.+
T Consensus 22 lfV~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~g 88 (99)
T 4fxv_A 22 LIVNYLPQN---MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQS 88 (99)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHHhCCCEECC
Confidence 467777633 23456677788999987776521 1 24556899999988865 4444443
No 91
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.95 E-value=57 Score=18.05 Aligned_cols=57 Identities=16% Similarity=0.139 Sum_probs=36.4
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
-++||+.. .-..+.+.++..+||++..+.+.. .-.|...+++.++.++..+...+..
T Consensus 30 l~V~nLp~---~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~~~~~g 95 (116)
T 1x4b_A 30 LFIGGLSF---ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDG 95 (116)
T ss_dssp EEEECCTT---CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCSEEETT
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCCcEECC
Confidence 45676652 223455777788999887666522 2345568999999998775444443
No 92
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=30.86 E-value=84 Score=19.54 Aligned_cols=57 Identities=14% Similarity=0.176 Sum_probs=36.9
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeC--------CcCEEEEeCHHHHHHHHHhccccccCC
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG--------FVPSLVVSSAKLAKEILKTHDLQFCSR 102 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g--------~~~~i~v~~p~~i~~vl~~~~~~~~~~ 102 (137)
++||++ ..-..+.+.+...+||++-.+.+. +.-.|--.+++.++.++......+.++
T Consensus 113 ~V~nLp---~~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~~~~~~Gr 177 (193)
T 2voo_A 113 YIKGFP---TDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKET 177 (193)
T ss_dssp EEECCC---TTCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCTTCEETTE
T ss_pred EecCCC---CcCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhCCCeECCE
Confidence 456664 233456788888999998776653 123455688999999986544444443
No 93
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=30.00 E-value=67 Score=17.05 Aligned_cols=61 Identities=13% Similarity=0.242 Sum_probs=40.1
Q ss_pred CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC-cCEEEEeCHHHHHHHHHh-ccccccCCC
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF-VPSLVVSSAKLAKEILKT-HDLQFCSRP 103 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~-~~~i~v~~p~~i~~vl~~-~~~~~~~~~ 103 (137)
--++||+..- .-..+.+.+...+||++..+.+.. .-.|...+++.++.++.. +...+.+++
T Consensus 12 ~l~V~nlp~~--~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~l~g~~~~g~~ 74 (96)
T 2kvi_A 12 RLFIGNLPLK--NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIECESQEMNFGKK 74 (96)
T ss_dssp EEEEESSTTS--CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHHHTCSSCBTTT
T ss_pred EEEEeCCCcc--cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHHcCCCeeCCcE
Confidence 3466887630 223455777888999988777633 355667899999999875 444554443
No 94
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=29.74 E-value=69 Score=17.10 Aligned_cols=58 Identities=16% Similarity=0.282 Sum_probs=36.0
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeC----CcCEEEEeCHHHHHHHHHh-ccccccCCC
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG----FVPSLVVSSAKLAKEILKT-HDLQFCSRP 103 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g----~~~~i~v~~p~~i~~vl~~-~~~~~~~~~ 103 (137)
++||+.. .-..+.+.+...+||++-.+.+. +.-.|-..+++.++.++.. +...+.++.
T Consensus 4 ~V~nLp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 66 (101)
T 2hvz_A 4 YVGNLGT---GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRGLDGKVICGSR 66 (101)
T ss_dssp EEECCCS---SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHHHHHSCSSSCC
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHHHCCCeECCcE
Confidence 3455542 22345577778899998776653 2345556899999988874 434444443
No 95
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.06 E-value=26 Score=19.49 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=37.1
Q ss_pred CccccccccCCCCChHHHHH---HHHHhcCCeEEEeeCC------------cCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 41 LPFIGNLHQFDVSKPQVSFW---ELSRKYGPLMSLRLGF------------VPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~g~------------~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
.-++||+..-... +.+. +...+||++..+.+.. .-.|.-.+++.++..+.. +...+..+
T Consensus 17 ~l~V~nLp~~~~~---~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~lng~~~~gr 91 (111)
T 2cpi_A 17 LVFVVGLSQRLAD---PEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVVVDGR 91 (111)
T ss_dssp CEEEEEECTTTCC---HHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHHHTTEEETTE
T ss_pred EEEEECCCCCCCH---HHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHHhCCCEECCE
Confidence 4567887643222 2344 6778899987776532 234456889999999876 55555443
No 96
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.49 E-value=73 Score=16.68 Aligned_cols=61 Identities=16% Similarity=0.293 Sum_probs=39.0
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHh-ccccccCCC
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKT-HDLQFCSRP 103 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~-~~~~~~~~~ 103 (137)
..-+++|+.. .-..+.+.+...+||++..+.+.. .-.|...+++.++.++.. +...+.+++
T Consensus 6 ~~l~v~nlp~---~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 76 (95)
T 2dnz_A 6 SGLYVGSLHF---NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGRP 76 (95)
T ss_dssp CEEEEESCCT---TCCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSSC
T ss_pred cEEEEeCCCC---CCCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCcE
Confidence 3445677653 223455777888999987776532 234557899999999874 444554443
No 97
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=27.23 E-value=83 Score=17.23 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=34.9
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC-c--CEEEEeCHHHHHHHHHh
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF-V--PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~-~--~~i~v~~p~~i~~vl~~ 94 (137)
.|-++||+..- --.+.+.++..+||++..+.+.. + -.|-..+++.+.+....
T Consensus 8 ~wL~VgNL~~~---~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~~ 62 (89)
T 2wbr_A 8 SWLLLKNLTAQ---IDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMA 62 (89)
T ss_dssp CEEEEECCCTT---CCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred ceEEEeCCCcc---CCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHHH
Confidence 46677887643 22356788899999998877533 3 34446788777777654
No 98
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=26.65 E-value=89 Score=17.41 Aligned_cols=56 Identities=7% Similarity=0.135 Sum_probs=34.8
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
++||+.. .-..+.+.+...+||++..+.+.. .-.|...+++.++.++.-+...+.+
T Consensus 40 ~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~~g 104 (124)
T 2jwn_A 40 YVGNVDY---GSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVFRG 104 (124)
T ss_dssp EEEEECT---TCCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEETT
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeECC
Confidence 4555542 223455777888999987766521 2345578999999988434444443
No 99
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=26.62 E-value=90 Score=17.45 Aligned_cols=60 Identities=13% Similarity=0.256 Sum_probs=39.3
Q ss_pred CccccccccCCCCChHHHHHHHHHhcCCeEEEeeC---------CcCEEEEeCHHHHHHHHHh-ccccccCCC
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG---------FVPSLVVSSAKLAKEILKT-HDLQFCSRP 103 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g---------~~~~i~v~~p~~i~~vl~~-~~~~~~~~~ 103 (137)
.-+++|+..- -..+.+.++..+||++..+.+. +.-.|...+++.++.++.. +...+.++.
T Consensus 24 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~~ 93 (126)
T 3ex7_B 24 ILFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQP 93 (126)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCeE
Confidence 3566777532 2345577778899999887763 1245667899999999864 554554443
No 100
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=26.53 E-value=84 Score=17.05 Aligned_cols=62 Identities=13% Similarity=0.081 Sum_probs=42.0
Q ss_pred CCccccccccCCCCC----hHHHHHHHHHhcCCeEEEeeC-------CcCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 40 GLPFIGNLHQFDVSK----PQVSFWELSRKYGPLMSLRLG-------FVPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~g-------~~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
..-++||+..- ..+ ..+.+.+...+||++..+.+. +.-.|.-.+++.++.++.. +...+.++
T Consensus 16 ~~l~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~g~ 89 (105)
T 2nlw_A 16 SVIVVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQ 89 (105)
T ss_dssp SEEEEESCCCC-CTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECSTT
T ss_pred CEEEEeCCCcc-hhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccCCC
Confidence 34577888754 322 456788888999999888764 2234556888888888875 55555544
No 101
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=26.48 E-value=88 Score=17.25 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=32.5
Q ss_pred HHHHHHHHhcCCeEEEeeCC-----------cCEEEEeCHHHHHHHHHh-ccccccCCCC
Q 039142 57 VSFWELSRKYGPLMSLRLGF-----------VPSLVVSSAKLAKEILKT-HDLQFCSRPA 104 (137)
Q Consensus 57 ~~~~~~~~~~g~~~~~~~g~-----------~~~i~v~~p~~i~~vl~~-~~~~~~~~~~ 104 (137)
+-+.+...+||++-.+.+.. .-.|.-.+++.+++.+.. +...|.+|+-
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR~i 89 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVV 89 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTEEC
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCCEE
Confidence 45666777899998888642 123556789888888765 5566666543
No 102
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=26.48 E-value=78 Score=16.65 Aligned_cols=60 Identities=13% Similarity=0.260 Sum_probs=38.0
Q ss_pred CccccccccCCCCC-hHHHHHHHHHhcCCeEEEeeC------CcCEEEEeCHHHHHHHHHh-cccccc
Q 039142 41 LPFIGNLHQFDVSK-PQVSFWELSRKYGPLMSLRLG------FVPSLVVSSAKLAKEILKT-HDLQFC 100 (137)
Q Consensus 41 ~p~~G~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~g------~~~~i~v~~p~~i~~vl~~-~~~~~~ 100 (137)
.-++||+..-.... ....+.+...+||++..+.+. +.-.|-..+++.++.++.. +...+.
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~ 77 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFY 77 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHHHTTCEET
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHHhCCCEEC
Confidence 45678876432221 223444888999999888764 3355667899999988865 444443
No 103
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=26.43 E-value=89 Score=17.32 Aligned_cols=57 Identities=12% Similarity=0.233 Sum_probs=37.2
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC-------cCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF-------VPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~-------~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
-++||+..- --.+.+.+...+||++..+.+.. .-.|--.+++.++.++.. +...+.+
T Consensus 8 lfV~nLp~~---~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~l~~~~~~g 72 (115)
T 4f25_A 8 IFIKNLDKS---IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLND 72 (115)
T ss_dssp EEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred EEECCCCCC---CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHHcCCCEECC
Confidence 466777532 23456777889999987766521 135667899999998865 4444433
No 104
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.07 E-value=89 Score=17.19 Aligned_cols=57 Identities=12% Similarity=0.095 Sum_probs=37.7
Q ss_pred CccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhcccccc
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFC 100 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~ 100 (137)
.-+++|+..- -..+.+.+...+||++..+.+.. .-.|...+++.++.++......+.
T Consensus 19 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~~~~~ 84 (116)
T 2cqd_A 19 KIFVGGLPYH---TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIID 84 (116)
T ss_dssp EEEEECCCSS---CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCSSCEET
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhCCCcCC
Confidence 4566777532 23455777788999998877643 234557899999999876433443
No 105
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=26.06 E-value=84 Score=16.89 Aligned_cols=57 Identities=12% Similarity=0.260 Sum_probs=36.7
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeC------C---cCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG------F---VPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g------~---~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
-++||+..- -..+.+.+...+||++..+.+. . .-.|-..+++.++.++.. +...+.+
T Consensus 26 l~V~nlp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 92 (106)
T 1p27_B 26 LFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMG 92 (106)
T ss_dssp EEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHHHTTCBSSS
T ss_pred EEEeCCCCC---CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHHhcCCEECC
Confidence 456776532 2345577888999998777652 1 234556899999998874 4444443
No 106
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=25.97 E-value=75 Score=16.31 Aligned_cols=57 Identities=14% Similarity=0.297 Sum_probs=36.2
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccc
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQF 99 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~ 99 (137)
.--++||+..- -..+.+.+...+||++..+.+.. .-.|...+++.++.++..+...+
T Consensus 12 ~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~~~~ 77 (87)
T 3s7r_A 12 GKMFVGGLSWD---TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQKEHRL 77 (87)
T ss_dssp TEEEEECCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSSCEEE
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhCCCEE
Confidence 34466777532 23455677788999987766521 13445678998888886544333
No 107
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.43 E-value=71 Score=15.85 Aligned_cols=56 Identities=16% Similarity=0.141 Sum_probs=31.7
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
++||++.- -..+.+.+...+||++..+.+.. .-.|-..+++.++.++......+.+
T Consensus 4 ~v~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~~~~~g 68 (77)
T 1uaw_A 4 FIGGLSWQ---TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDS 68 (77)
T ss_dssp EEESCCSS---CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTTCCCSS
T ss_pred EEeCCCCC---CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCCCccCC
Confidence 35565432 22334667778899876555421 1233357888888888764433333
No 108
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=25.25 E-value=87 Score=16.81 Aligned_cols=61 Identities=15% Similarity=0.099 Sum_probs=39.0
Q ss_pred CccccccccCCC---CChHHHHHHHHHhcCCeEEEeeC---------CcCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 41 LPFIGNLHQFDV---SKPQVSFWELSRKYGPLMSLRLG---------FVPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 41 ~p~~G~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~g---------~~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
.-++||++.... .-..+.+.+...+||++..+.+. +.-.|.-.+++.++..+.. +...+..
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~lng~~~~g 81 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLDL 81 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHHHTTCBSSS
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHHhCCcccCC
Confidence 346777765321 22335677788899999888763 1234557899999988864 4444543
No 109
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=24.78 E-value=1.2e+02 Score=18.22 Aligned_cols=57 Identities=12% Similarity=0.099 Sum_probs=38.0
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccc
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQF 99 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~ 99 (137)
.--++||++.- -..+.+.++..+||++..+.+-. .-.|...+++.++.++..+...+
T Consensus 14 ~~l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~~~ 79 (196)
T 1l3k_A 14 RKLFIGGLSFE---TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKV 79 (196)
T ss_dssp GEEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSCEE
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCCEE
Confidence 34567887632 23456778888999987666421 24566789999999997654444
No 110
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=24.43 E-value=78 Score=15.98 Aligned_cols=46 Identities=7% Similarity=0.099 Sum_probs=30.5
Q ss_pred HHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 56 QVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 56 ~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
.+.+.+...+||++..+.+.. .-.|...+++.++.++.. +...+.+
T Consensus 15 ~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~l~g~~~~g 70 (83)
T 3md1_A 15 DETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNG 70 (83)
T ss_dssp HHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred HHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHHhcCCeeCC
Confidence 455677788999987766421 135557899999998875 4444433
No 111
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.15 E-value=99 Score=17.04 Aligned_cols=60 Identities=15% Similarity=0.117 Sum_probs=39.7
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---cCEEEEeCHHHHHHHHHh-ccccccCCCC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---VPSLVVSSAKLAKEILKT-HDLQFCSRPA 104 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---~~~i~v~~p~~i~~vl~~-~~~~~~~~~~ 104 (137)
-+++|+.. .-..+.+.+...+||++..+.+.. .-.|.-.+++.++.++.. +...+.+++-
T Consensus 13 l~V~nLp~---~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~l 76 (111)
T 1whx_A 13 ILAKNLPA---GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVPL 76 (111)
T ss_dssp EEEESCCT---TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSBC
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeEE
Confidence 35676652 234456778889999998887633 345556889998888865 4455555543
No 112
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=24.13 E-value=98 Score=16.99 Aligned_cols=57 Identities=14% Similarity=0.248 Sum_probs=36.9
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeC-CcCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG-FVPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g-~~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
-++||+.. .-..+.+.+...+||++-.+.+. +.-.|...+++.++.++.. +...+.+
T Consensus 34 l~V~nLp~---~~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~l~g~~~~g 92 (108)
T 2jvo_A 34 LFVRPFPL---DVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEEVHGKSFAN 92 (108)
T ss_dssp EEECSSCT---TCCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHHHTTCEETT
T ss_pred EEEECCCC---CCCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 45676642 22345577888999988776653 3445557899999988865 4444433
No 113
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=23.85 E-value=2e+02 Score=20.57 Aligned_cols=58 Identities=9% Similarity=0.080 Sum_probs=37.2
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeC---------CcCEEEEeCHHHHHHHHHh-cccccc
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG---------FVPSLVVSSAKLAKEILKT-HDLQFC 100 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g---------~~~~i~v~~p~~i~~vl~~-~~~~~~ 100 (137)
..-++||+..- -....+..+..+||.|..+.+. +.-.|...+++.+..++.. +...+.
T Consensus 103 ~~lfV~nL~~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~lng~~i~ 170 (437)
T 3pgw_S 103 KTLFVARVNYD---TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKID 170 (437)
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHHcCCCEEC
Confidence 34567887533 2334567778889998777652 1245557889888888865 444443
No 114
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=23.77 E-value=1.1e+02 Score=17.40 Aligned_cols=67 Identities=12% Similarity=0.041 Sum_probs=42.8
Q ss_pred CCCCccccccccCC--CCChHHHHHHHHHhcCCeEEEeeCC-------------cCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 38 PWGLPFIGNLHQFD--VSKPQVSFWELSRKYGPLMSLRLGF-------------VPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 38 p~~~p~~G~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~g~-------------~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
|...-++.|+.... ..+..+-+.+...+||++..+.+.. .-.|--.+++.+++.+.. +...|.+
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 33455667775431 2455677788888999988776522 123445789888888765 6667766
Q ss_pred CCC
Q 039142 102 RPA 104 (137)
Q Consensus 102 ~~~ 104 (137)
|+-
T Consensus 99 R~i 101 (118)
T 3ue2_A 99 RKV 101 (118)
T ss_dssp EEC
T ss_pred cEE
Confidence 643
No 115
>2ghp_A U4/U6 snRNA-associated splicing factor PRP24; RNA chaperone, RNA binding domain, RNA recognition motif, SP factor, snRNP, spliceosome; 2.70A {Saccharomyces cerevisiae} SCOP: d.58.7.1 d.58.7.1 d.58.7.1 PDB: 2go9_A 2kh9_A
Probab=23.25 E-value=1.6e+02 Score=19.19 Aligned_cols=61 Identities=10% Similarity=0.118 Sum_probs=40.3
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeC-------CcCEEEEeCHHHHHHHHHhccccccCCC
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLG-------FVPSLVVSSAKLAKEILKTHDLQFCSRP 103 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g-------~~~~i~v~~p~~i~~vl~~~~~~~~~~~ 103 (137)
..-++||++.- -..+.+.+...+||++..+.+. +.-.|...+++.++.++..+...+.+++
T Consensus 42 ~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~A~~A~~~~~~~~~g~~ 109 (292)
T 2ghp_A 42 TTVLVKNLPKS---YNQNKVYKYFKHCGPIIHVDVADSLKKNFRFARIEFARYDGALAAITKTHKVVGQNE 109 (292)
T ss_dssp CEEEEEEECTT---CCHHHHHHHHGGGSCEEEEEEEECTTSSSEEEEEEESSHHHHHHHHTTTTCEETTEE
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCcEEEEEEECCHHHHHHHHHhCCcEeCCcE
Confidence 34567777632 2345577788899998776652 2345667899999999965555554443
No 116
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.19 E-value=1e+02 Score=16.87 Aligned_cols=56 Identities=7% Similarity=0.032 Sum_probs=35.0
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
++||+.. .-..+.+.+...+||.+..+.+.. .-.|...+++.++.++.-+...+.+
T Consensus 29 ~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~~g 93 (114)
T 2cq4_A 29 FCMQLAA---RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTGQRLLG 93 (114)
T ss_dssp EEESCCT---TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTTEEETT
T ss_pred EEeCCCC---CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCCCEeCC
Confidence 4566642 223455777788999998887641 2345567888888888435444433
No 117
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=22.88 E-value=88 Score=16.04 Aligned_cols=56 Identities=11% Similarity=0.109 Sum_probs=34.1
Q ss_pred cccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccC
Q 039142 43 FIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCS 101 (137)
Q Consensus 43 ~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~ 101 (137)
++||+..- -..+.+.+...+||++..+.+.. .-.|...+++.++.++.-+...+.+
T Consensus 10 ~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~~g 74 (89)
T 3ucg_A 10 YVGNVDYG---ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRG 74 (89)
T ss_dssp EEESCCTT---CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEETT
T ss_pred EEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEECC
Confidence 45665422 23455777788999987766421 1345567888888888434444433
No 118
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.98 E-value=1e+02 Score=16.44 Aligned_cols=60 Identities=8% Similarity=0.075 Sum_probs=38.4
Q ss_pred CCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC-------cCEEEEeCHHHHHHHHHh-ccccccC
Q 039142 39 WGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF-------VPSLVVSSAKLAKEILKT-HDLQFCS 101 (137)
Q Consensus 39 ~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~-------~~~i~v~~p~~i~~vl~~-~~~~~~~ 101 (137)
...-+++|+..- -..+.+.++..+||++..+.+.. .-.|...+++.++.++.. +...+..
T Consensus 15 ~~~l~V~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 82 (103)
T 2cq3_A 15 PKRLHVSNIPFR---FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEG 82 (103)
T ss_dssp CCEEEEESCCTT---CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHHHTTCEETT
T ss_pred CCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 344566777532 23445777788999987777631 245557899999998864 4444433
No 119
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=21.36 E-value=1.3e+02 Score=17.54 Aligned_cols=50 Identities=12% Similarity=0.075 Sum_probs=34.4
Q ss_pred ccccccccCCCCChHHHHHHHHHhcCCeEEEeeCCc-----CEEEEeCHHHHHHHHHh
Q 039142 42 PFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGFV-----PSLVVSSAKLAKEILKT 94 (137)
Q Consensus 42 p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~-----~~i~v~~p~~i~~vl~~ 94 (137)
-++||+.. .--.+.+.+...+||.+-.+.+... -.|.-.+++.++..+.+
T Consensus 31 I~V~NL~~---~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 31 IIVENLFY---PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEEESCCS---CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCC---CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 34688752 2234567888999999887776432 45667888888888754
No 120
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=20.65 E-value=1.2e+02 Score=16.90 Aligned_cols=59 Identities=15% Similarity=0.137 Sum_probs=38.5
Q ss_pred CccccccccCCCCChHHHHHHHHHhcC-CeEEEeeC-----CcCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 41 LPFIGNLHQFDVSKPQVSFWELSRKYG-PLMSLRLG-----FVPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 41 ~p~~G~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~g-----~~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
--++||+.. .-..+.+.+...+|| ++..+.+. +.-.|...+++.+++.+.. +...+.++
T Consensus 30 ~l~VgnLp~---~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~lng~~l~Gr 95 (111)
T 2jvr_A 30 RITMKNLPE---GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALERLNNIEFRGS 95 (111)
T ss_dssp EEEEECSSC---CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHHTTTEEETTE
T ss_pred EEEEECCCC---CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHHcCCCEECCe
Confidence 456688763 334456777888999 77776663 2345667889999988865 44445443
No 121
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.45 E-value=1.1e+02 Score=16.33 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=38.5
Q ss_pred CCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC---------cCEEEEeCHHHHHHHHHhccccccCC
Q 039142 40 GLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF---------VPSLVVSSAKLAKEILKTHDLQFCSR 102 (137)
Q Consensus 40 ~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~---------~~~i~v~~p~~i~~vl~~~~~~~~~~ 102 (137)
..-+++|+..- -..+.+.++..+||++..+.+.. .-.|...+++.++.++..+...+..+
T Consensus 17 ~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~~~~~g~ 85 (105)
T 2dh8_A 17 GKLFVGGLDWS---TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGR 85 (105)
T ss_dssp SEECCBSCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCSEEETTE
T ss_pred CEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCCCeECCE
Confidence 34566777532 23455777788999987766522 13455789999999987755555443
No 122
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.12 E-value=1.1e+02 Score=16.24 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=39.1
Q ss_pred CCCCccccccccCCCCChHHHHHHHHHhcCCeEEEeeCC-------cCEEEEeCHHHHHHHHHh-ccccccCC
Q 039142 38 PWGLPFIGNLHQFDVSKPQVSFWELSRKYGPLMSLRLGF-------VPSLVVSSAKLAKEILKT-HDLQFCSR 102 (137)
Q Consensus 38 p~~~p~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~-------~~~i~v~~p~~i~~vl~~-~~~~~~~~ 102 (137)
+...-++||+..- -..+.+.+...+||++..+.+.. .-.|...+++.++.++.. +...+..+
T Consensus 14 ~~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g~ 83 (103)
T 2d9p_A 14 QVVNLYVKNLDDG---IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 83 (103)
T ss_dssp SCCCEEEECCCTT---CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEeCCc
Confidence 4445567887533 23345677778899987766531 234557899999998874 44444443
Done!