Your job contains 1 sequence.
>039144
MSPAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNH
KARERQKLRRKLGKQLQLQQQQQIFQHHHHLQQCCQVPNHHQQLLHCSFQSPPAGGSFSN
PAKVLTQGMLTEDASTKTMSYTWKKGIQERVEMEKSLMGMYGRDWKMMVDVAPRSLQPCC
SKPPLRTLELFPITATNLKEECNSSKQN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 039144
(208 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2065484 - symbol:PRS "PRESSED FLOWER" species:... 306 3.6e-42 2
UNIPROTKB|Q33DK1 - symbol:WOX3 "WUSCHEL-related homeobox ... 298 5.6e-34 2
TAIR|locus:2088550 - symbol:WOX1 "WUSCHEL related homeobo... 243 1.3e-20 1
TAIR|locus:2825767 - symbol:WOX4 "WUSCHEL related homeobo... 242 1.7e-20 1
TAIR|locus:2074638 - symbol:WOX5 "WUSCHEL related homeobo... 211 7.3e-20 2
TAIR|locus:2049547 - symbol:PFS2 "PRETTY FEW SEEDS 2" spe... 234 1.2e-19 1
TAIR|locus:2060902 - symbol:WUS "AT2G17950" species:3702 ... 225 1.1e-18 1
UNIPROTKB|Q33DK0 - symbol:WOX1B "WUSCHEL-related homeobox... 223 1.7e-18 1
TAIR|locus:2168504 - symbol:WOX2 "WUSCHEL related homeobo... 221 2.8e-18 1
TAIR|locus:2166434 - symbol:WOX7 "AT5G05770" species:3702... 203 2.3e-16 1
TAIR|locus:2030487 - symbol:WOX10 "AT1G20710" species:370... 162 5.0e-12 1
TAIR|locus:2057614 - symbol:HB-3 "homeobox-3" species:370... 161 3.1e-11 1
TAIR|locus:2161353 - symbol:WOX8 "AT5G45980" species:3702... 156 7.4e-11 1
TAIR|locus:2127968 - symbol:WOX13 "AT4G35550" species:370... 151 1.4e-10 1
TAIR|locus:2030467 - symbol:WOX14 "AT1G20700" species:370... 145 3.2e-10 1
TAIR|locus:2096429 - symbol:WOX11 "AT3G03660" species:370... 143 1.6e-09 1
TAIR|locus:2175941 - symbol:WOX12 "AT5G17810" species:370... 141 1.9e-09 1
TAIR|locus:2161388 - symbol:AT5G46010 species:3702 "Arabi... 102 1.4e-05 1
>TAIR|locus:2065484 [details] [associations]
symbol:PRS "PRESSED FLOWER" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0009908 "flower development" evidence=IMP]
[GO:0009943 "adaxial/abaxial axis specification" evidence=IMP]
[GO:0009947 "centrolateral axis specification" evidence=IMP]
[GO:0010865 "stipule development" evidence=IMP] [GO:0048513 "organ
development" evidence=IGI] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009908 EMBL:AC007171 EMBL:AB058920
EMBL:AY251397 IPI:IPI00536433 PIR:A84687 RefSeq:NP_180429.1
UniGene:At.28458 ProteinModelPortal:Q9SIB4 SMR:Q9SIB4 STRING:Q9SIB4
PRIDE:Q9SIB4 EnsemblPlants:AT2G28610.1 GeneID:817410
KEGG:ath:AT2G28610 TAIR:At2g28610 eggNOG:NOG302146
InParanoid:Q9SIB4 OMA:PVASTRW ProtClustDB:CLSN2913193
Genevestigator:Q9SIB4 GO:GO:0009943 GO:GO:0009947 GO:GO:0010865
Uniprot:Q9SIB4
Length = 244
Score = 306 (112.8 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 1 MSPAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNH 60
MSP STRWCPTPEQLMILEEMYRSG+RTPNA QIQ ITAHL+ +G+IEGKNVFYWFQNH
Sbjct: 1 MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH 60
Query: 61 KARE 64
KAR+
Sbjct: 61 KARD 64
Score = 157 (60.3 bits), Expect = 3.6e-42, Sum P(2) = 3.6e-42
Identities = 47/122 (38%), Positives = 64/122 (52%)
Query: 99 NHHQQLLHCSFQSPPAGGSFSNPAKVLTQGMLTEDASTKTMS--YTWKKGIQERVEMEKS 156
NHH+ H SF S +P + QG +A +K M+ Y K G +E + M+KS
Sbjct: 124 NHHRPYDHMSFDCC----SHPSPMCLPHQGTGVGEAPSKVMNEYYCTKSGAEE-ILMQKS 178
Query: 157 LMG---MYGRDWKMMVDVAPRSLQP--------CC----SKP--PLRTLELFPITATNLK 199
+ G YGRDW MM+D+ PR P CC S P PL+TLELFPI++ N K
Sbjct: 179 ITGPNSSYGRDWMMMMDMGPRPSYPSSSSSPISCCNMMMSSPKIPLKTLELFPISSINSK 238
Query: 200 EE 201
++
Sbjct: 239 QD 240
>UNIPROTKB|Q33DK1 [details] [associations]
symbol:WOX3 "WUSCHEL-related homeobox 3" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:DP000010 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000148
EMBL:DP000011 eggNOG:NOG302146 EMBL:AB218893 EMBL:AM234748
ProteinModelPortal:Q33DK1 IntAct:Q33DK1
EnsemblPlants:LOC_Os11g01130.1 EnsemblPlants:LOC_Os12g01120.1
Gramene:Q33DK1 OMA:SNQLEEW Uniprot:Q33DK1
Length = 203
Score = 298 (110.0 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 53/64 (82%), Positives = 59/64 (92%)
Query: 1 MSPAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNH 60
M STRWCPTPEQLMILEEMYRSGVRTPNA++IQ ITAHL+++G+IEGKNVFYWFQNH
Sbjct: 1 MPQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNH 60
Query: 61 KARE 64
KARE
Sbjct: 61 KARE 64
Score = 87 (35.7 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 19/39 (48%), Positives = 27/39 (69%)
Query: 172 APRSLQPCCSKPPLRTLELFPITATN--LKEECNSSKQN 208
A ++ PCC PL+TLELFP +T+ LKE+C SS ++
Sbjct: 159 ADMAIPPCCR--PLKTLELFPTKSTSGGLKEDCCSSSKS 195
>TAIR|locus:2088550 [details] [associations]
symbol:WOX1 "WUSCHEL related homeobox 1" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048513 "organ development"
evidence=IGI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0048513
EMBL:AB019230 EMBL:AY251394 IPI:IPI00529632 RefSeq:NP_188428.3
UniGene:At.49388 ProteinModelPortal:Q6X7K0 SMR:Q6X7K0 PaxDb:Q6X7K0
PRIDE:Q6X7K0 EnsemblPlants:AT3G18010.1 GeneID:821325
KEGG:ath:AT3G18010 TAIR:At3g18010 eggNOG:NOG308045
HOGENOM:HOG000090885 InParanoid:Q6X7K0 OMA:DEGELQH PhylomeDB:Q6X7K0
ProtClustDB:CLSN2920267 Genevestigator:Q6X7K0 Uniprot:Q6X7K0
Length = 350
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 43/59 (72%), Positives = 49/59 (83%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
S+RW PTP+QL +LEE+YR G RTP+A IQ ITA L +GKIEGKNVFYWFQNHKARE
Sbjct: 74 SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARE 132
>TAIR|locus:2825767 [details] [associations]
symbol:WOX4 "WUSCHEL related homeobox 4" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEP] [GO:0010067 "procambium histogenesis"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0007165 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AC083835 GO:GO:0010067 EMBL:AY251396 EMBL:BT010692
EMBL:BT010974 IPI:IPI00536109 PIR:F96511 RefSeq:NP_175145.2
UniGene:At.38691 ProteinModelPortal:Q6X7J9 SMR:Q6X7J9 IntAct:Q6X7J9
EnsemblPlants:AT1G46480.1 GeneID:841113 KEGG:ath:AT1G46480
GeneFarm:3104 TAIR:At1g46480 eggNOG:NOG268206 HOGENOM:HOG000272700
InParanoid:Q6X7J9 OMA:ENEYKRT PhylomeDB:Q6X7J9
ProtClustDB:CLSN2680403 Genevestigator:Q6X7J9 Uniprot:Q6X7J9
Length = 251
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 43/60 (71%), Positives = 49/60 (81%)
Query: 5 GSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
G TRW PT EQ+ ILE +Y+ G+RTPNA QI+HIT L +GKIEGKNVFYWFQNHKARE
Sbjct: 87 GGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARE 146
>TAIR|locus:2074638 [details] [associations]
symbol:WOX5 "WUSCHEL related homeobox 5" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=IEP] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 EMBL:AC073395 EMBL:AY251398 EMBL:AY150812
IPI:IPI00524533 RefSeq:NP_187735.2 UniGene:At.39787
ProteinModelPortal:Q8H1D2 SMR:Q8H1D2 STRING:Q8H1D2
EnsemblPlants:AT3G11260.1 GeneID:820297 KEGG:ath:AT3G11260
TAIR:At3g11260 eggNOG:NOG241769 HOGENOM:HOG000238479
InParanoid:Q8H1D2 OMA:TGTKCGR PhylomeDB:Q8H1D2
ProtClustDB:CLSN2690857 Genevestigator:Q8H1D2 Uniprot:Q8H1D2
Length = 182
Score = 211 (79.3 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 38/57 (66%), Positives = 45/57 (78%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
RW PT EQL IL +++R+G+RTP QIQ I+ LS +GKIE KNVFYWFQNHKARE
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARE 80
Score = 39 (18.8 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 170 DVAPRSLQPCCSKPP-LRTLELFPITATNLKEECNS 204
DV S + C + + TL+LFP+ N E+ NS
Sbjct: 102 DVFEISEEDCQEEEKVIETLQLFPV---NSFEDSNS 134
>TAIR|locus:2049547 [details] [associations]
symbol:PFS2 "PRETTY FEW SEEDS 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS;NAS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009409 "response
to cold" evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048482 "ovule morphogenesis" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0016049 "cell
growth" evidence=IMP] [GO:0048314 "embryo sac morphogenesis"
evidence=IMP] [GO:0048353 "primary endosperm nucleus" evidence=IDA]
[GO:0048366 "leaf development" evidence=IMP] [GO:0048437 "floral
organ development" evidence=IMP] [GO:0048446 "petal morphogenesis"
evidence=RCA;IMP] [GO:0051301 "cell division" evidence=IMP]
[GO:0048445 "carpel morphogenesis" evidence=RCA] InterPro:IPR001356
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0030154 EMBL:CP002685 GO:GO:0051301
GO:GO:0016049 GO:GO:0043565 GO:GO:0048477 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
EMBL:AC005560 GO:GO:0048446 GO:GO:0048482 EMBL:AY251399
EMBL:AY885222 EMBL:AY085832 IPI:IPI00544402 PIR:E84425
RefSeq:NP_565263.1 UniGene:At.42485 ProteinModelPortal:Q9ZVF5
SMR:Q9ZVF5 STRING:Q9ZVF5 PRIDE:Q9ZVF5 EnsemblPlants:AT2G01500.1
GeneID:814678 KEGG:ath:AT2G01500 TAIR:At2g01500 eggNOG:NOG239725
OMA:CDINGND PhylomeDB:Q9ZVF5 ProtClustDB:CLSN2916958
Genevestigator:Q9ZVF5 GO:GO:0048353 GO:GO:0048314 Uniprot:Q9ZVF5
Length = 271
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 43/63 (68%), Positives = 49/63 (77%)
Query: 3 PAGST-RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
PA +T RW PTPEQ+ LEE+YRSG RTP QIQ I + L +G+IEGKNVFYWFQNHK
Sbjct: 55 PAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHK 114
Query: 62 ARE 64
ARE
Sbjct: 115 ARE 117
>TAIR|locus:2060902 [details] [associations]
symbol:WUS "AT2G17950" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048653 "anther development" evidence=IMP] [GO:0080166 "stomium
development" evidence=IMP] [GO:0010492 "maintenance of shoot apical
meristem identity" evidence=IGI] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010093 "specification of floral organ identity"
evidence=RCA] [GO:0048440 "carpel development" evidence=RCA]
[GO:0019827 "stem cell maintenance" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002685
GO:GO:0043565 GO:GO:0048477 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010492 EMBL:AC006201
EMBL:AJ012310 EMBL:AY086385 IPI:IPI00522840 PIR:D84558 PIR:T00829
RefSeq:NP_565429.1 UniGene:At.51 ProteinModelPortal:Q9SB92
SMR:Q9SB92 IntAct:Q9SB92 STRING:Q9SB92 EnsemblPlants:AT2G17950.1
GeneID:816305 KEGG:ath:AT2G17950 GeneFarm:4830 TAIR:At2g17950
eggNOG:NOG286377 InParanoid:Q9SB92 OMA:GEDHING PhylomeDB:Q9SB92
ProtClustDB:CLSN2688215 Genevestigator:Q9SB92 GO:GO:0080166
Uniprot:Q9SB92
Length = 292
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 42/60 (70%), Positives = 48/60 (80%)
Query: 6 STRWCPTPEQLMILEEMY-RSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
STRW PT EQ+ IL+E+Y + +R+P A QIQ ITA L FGKIEGKNVFYWFQNHKARE
Sbjct: 36 STRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARE 95
>UNIPROTKB|Q33DK0 [details] [associations]
symbol:WOX1B "WUSCHEL-related homeobox 1B" species:39947
"Oryza sativa Japonica Group" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:CM000141 EMBL:AB218894
ProteinModelPortal:Q33DK0 IntAct:Q33DK0 Gramene:Q33DK0
Uniprot:Q33DK0
Length = 289
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 42/63 (66%), Positives = 50/63 (79%)
Query: 3 PAGSTRWCPTPEQLMILEEMYRS-GVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
P+G TRW PT EQ+ IL E+Y S G+R+PN+ QIQ I A L +G+IEGKNVFYWFQNHK
Sbjct: 31 PSG-TRWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHK 89
Query: 62 ARE 64
ARE
Sbjct: 90 ARE 92
>TAIR|locus:2168504 [details] [associations]
symbol:WOX2 "WUSCHEL related homeobox 2" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009880 "embryonic pattern specification"
evidence=IMP] [GO:0009942 "longitudinal axis specification"
evidence=IMP] [GO:0010654 "apical cell fate commitment"
evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0048825 "cotyledon development"
evidence=IGI;IMP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0090451 "cotyledon boundary formation" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0080167 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009942 GO:GO:0048825 EMBL:AB016890 EMBL:AY251392
EMBL:AY251393 IPI:IPI00526689 RefSeq:NP_200742.2 UniGene:At.49429
ProteinModelPortal:Q6X7K1 SMR:Q6X7K1 EnsemblPlants:AT5G59340.1
GeneID:836053 KEGG:ath:AT5G59340 TAIR:At5g59340 eggNOG:NOG294844
HOGENOM:HOG000090362 InParanoid:Q6X7K1 OMA:RAYGHIE PhylomeDB:Q6X7K1
ProtClustDB:CLSN2681679 Genevestigator:Q6X7K1 GermOnline:AT5G59340
GO:GO:0010654 GO:GO:0090451 Uniprot:Q6X7K1
Length = 260
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 4 AGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
A S+RW PT +Q+ +LE +Y+ G+RTP+A QIQ IT L +G IEGKNVFYWFQNHKAR
Sbjct: 10 ASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKAR 69
Query: 64 E 64
+
Sbjct: 70 Q 70
>TAIR|locus:2166434 [details] [associations]
symbol:WOX7 "AT5G05770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB005237
eggNOG:NOG241769 EMBL:AB493739 IPI:IPI00518458 RefSeq:NP_196196.1
UniGene:At.54734 ProteinModelPortal:Q9FFK0 SMR:Q9FFK0
EnsemblPlants:AT5G05770.1 GeneID:830462 KEGG:ath:AT5G05770
TAIR:At5g05770 InParanoid:Q9FFK0 PhylomeDB:Q9FFK0
Genevestigator:Q9FFK0 Uniprot:Q9FFK0
Length = 122
Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
RW PT EQ+ +L +++++G+RTP+ QIQ I+ LS +GKIE KNVFYWFQNHKARE
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARE 85
>TAIR|locus:2030487 [details] [associations]
symbol:WOX10 "AT1G20710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 IPI:IPI00538890 PIR:G86339 RefSeq:NP_173494.1
UniGene:At.51695 ProteinModelPortal:Q9LM83 SMR:Q9LM83
EnsemblPlants:AT1G20710.1 GeneID:838661 KEGG:ath:AT1G20710
TAIR:At1g20710 eggNOG:NOG325202 HOGENOM:HOG000070737
InParanoid:Q9LM83 OMA:NPRRIKE PhylomeDB:Q9LM83
ProtClustDB:CLSN2914683 Genevestigator:Q9LM83 Uniprot:Q9LM83
Length = 197
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
RW PT QL ILE +Y+ G TPN +I+ IT LS G+I KNV++WFQN +AR
Sbjct: 79 RWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRAR 134
>TAIR|locus:2057614 [details] [associations]
symbol:HB-3 "homeobox-3" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010075 "regulation of meristem
growth" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA;IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI] [GO:0009737 "response to abscisic acid stimulus"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0010093 "specification of floral organ identity" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0048440
"carpel development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009735 GO:GO:0008284 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:U78721 GO:GO:0010075 HOGENOM:HOG000154860
ProtClustDB:CLSN2680017 EMBL:AY251401 EMBL:AK118501 EMBL:BT005296
IPI:IPI00546241 PIR:G84750 RefSeq:NP_180944.2 UniGene:At.14699
ProteinModelPortal:Q6X7J4 SMR:Q6X7J4 IntAct:Q6X7J4
EnsemblPlants:AT2G33880.1 GeneID:817958 KEGG:ath:AT2G33880
TAIR:At2g33880 eggNOG:NOG331259 InParanoid:Q6X7J4 OMA:QHGASYY
PhylomeDB:Q6X7J4 Genevestigator:Q6X7J4 GermOnline:AT2G33880
Uniprot:Q6X7J4
Length = 378
Score = 161 (61.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 2 SPAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
SP RW P PEQ+ ILE ++ SG+ P +I+ I A L +G++ NVFYWFQN K
Sbjct: 49 SPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRK 108
Query: 62 AR 63
+R
Sbjct: 109 SR 110
>TAIR|locus:2161353 [details] [associations]
symbol:WOX8 "AT5G45980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IGI] [GO:0009793 "embryo development ending
in seed dormancy" evidence=IGI;IMP] [GO:0048825 "cotyledon
development" evidence=IGI;IMP] [GO:0030010 "establishment of cell
polarity" evidence=IMP] [GO:0090451 "cotyledon boundary formation"
evidence=IGI] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008284 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AB006698 GO:GO:0030010 GO:GO:0048825 GO:GO:0090451
EMBL:AY251400 IPI:IPI00530694 RefSeq:NP_199410.2 UniGene:At.23155
ProteinModelPortal:Q6X7J5 SMR:Q6X7J5 PRIDE:Q6X7J5
EnsemblPlants:AT5G45980.1 GeneID:834638 KEGG:ath:AT5G45980
TAIR:At5g45980 eggNOG:NOG319740 HOGENOM:HOG000154860 OMA:EIQRIRI
PhylomeDB:Q6X7J5 ProtClustDB:CLSN2680017 Genevestigator:Q6X7J5
GermOnline:AT5G45980 Uniprot:Q6X7J5
Length = 325
Score = 156 (60.0 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 3 PAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKA 62
P RW P PEQ+ ILE ++ SG P +IQ I L +G+I NVFYWFQN K+
Sbjct: 50 PDPKPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKS 109
Query: 63 R 63
R
Sbjct: 110 R 110
>TAIR|locus:2127968 [details] [associations]
symbol:WOX13 "AT4G35550" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL161587 EMBL:AL031135 HOGENOM:HOG000070737 EMBL:AY251404
EMBL:AY048268 EMBL:BT000538 IPI:IPI00543316 PIR:T04660
RefSeq:NP_195280.1 UniGene:At.2408 UniGene:At.50397
ProteinModelPortal:O81788 SMR:O81788 PRIDE:O81788
EnsemblPlants:AT4G35550.1 GeneID:829707 KEGG:ath:AT4G35550
TAIR:At4g35550 eggNOG:NOG283530 InParanoid:O81788 OMA:VEMHKTL
PhylomeDB:O81788 ProtClustDB:CLSN2916183 Genevestigator:O81788
GermOnline:AT4G35550 Uniprot:O81788
Length = 268
Score = 151 (58.2 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 28/56 (50%), Positives = 37/56 (66%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
RW PTP QL ILE ++ G TP+ +I+ IT LS G+I +NV+ WFQN +AR
Sbjct: 99 RWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRAR 154
>TAIR|locus:2030467 [details] [associations]
symbol:WOX14 "AT1G20700" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010072 "primary shoot apical meristem
specification" evidence=IMP] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
EMBL:AC069251 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0010072 HOGENOM:HOG000070737
ProtClustDB:CLSN2914683 eggNOG:NOG283530 EMBL:AJ441297
IPI:IPI00533426 RefSeq:NP_173493.2 UniGene:At.41695
ProteinModelPortal:Q9LM84 SMR:Q9LM84 EnsemblPlants:AT1G20700.1
GeneID:838660 KEGG:ath:AT1G20700 TAIR:At1g20700 InParanoid:Q9LM84
OMA:SHRISTR PhylomeDB:Q9LM84 Genevestigator:Q9LM84
GermOnline:AT1G20700 Uniprot:Q9LM84
Length = 211
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 28/56 (50%), Positives = 34/56 (60%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
RW PT QL ILE +Y G TPN +I+ I LS G+I NV+ WFQN +AR
Sbjct: 95 RWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRAR 150
>TAIR|locus:2096429 [details] [associations]
symbol:WOX11 "AT3G03660" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002686 GO:GO:0043565
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC009327
HOGENOM:HOG000064623 ProtClustDB:CLSN2680059 IPI:IPI00891503
RefSeq:NP_001118563.1 UniGene:At.40942 ProteinModelPortal:B3H5D3
SMR:B3H5D3 EnsemblPlants:AT3G03660.2 GeneID:821196
KEGG:ath:AT3G03660 OMA:ILESIFH ArrayExpress:B3H5D3
Genevestigator:B3H5D3 Uniprot:B3H5D3
Length = 297
Score = 143 (55.4 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN ++R
Sbjct: 32 SRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQNRRSR 88
>TAIR|locus:2175941 [details] [associations]
symbol:WOX12 "AT5G17810" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0007275 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AB006706
EMBL:AY251403 EMBL:AK117910 EMBL:BT006232 IPI:IPI00524309
RefSeq:NP_001190327.1 RefSeq:NP_197283.2 UniGene:At.31506
ProteinModelPortal:Q8GY25 SMR:Q8GY25 IntAct:Q8GY25
EnsemblPlants:AT5G17810.1 EnsemblPlants:AT5G17810.2 GeneID:831649
KEGG:ath:AT5G17810 TAIR:At5g17810 eggNOG:NOG256790
HOGENOM:HOG000064623 InParanoid:Q8GY25 OMA:NNGMENL PhylomeDB:Q8GY25
ProtClustDB:CLSN2680059 Genevestigator:Q8GY25 Uniprot:Q8GY25
Length = 268
Score = 141 (54.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
RW P PEQ++ILE ++ SG P + I L FG + NVFYWFQN ++R
Sbjct: 21 RWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQNRRSR 76
>TAIR|locus:2161388 [details] [associations]
symbol:AT5G46010 species:3702 "Arabidopsis thaliana"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0043565 GO:GO:0003700 SUPFAM:SSF46689 EMBL:AB006698
IPI:IPI00544220 RefSeq:NP_199413.1 UniGene:At.55398
ProteinModelPortal:Q9FNM1 SMR:Q9FNM1 EnsemblPlants:AT5G46010.1
GeneID:834641 KEGG:ath:AT5G46010 TAIR:At5g46010 InParanoid:Q9FNM1
PhylomeDB:Q9FNM1 Genevestigator:Q9FNM1 Uniprot:Q9FNM1
Length = 122
Score = 102 (41.0 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 WCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGK-IEGKNVFYWFQNHK 61
W P Q ILEE++ G P+ + I+ IT L +G+ ++ +V+ WF N K
Sbjct: 55 WKPNQHQAQILEELFIGGTVNPSLTSIKQITIKLQSYGEEVDDADVYKWFHNRK 108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.129 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 208 179 0.00089 109 3 11 22 0.42 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 603 (64 KB)
Total size of DFA: 181 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.83u 0.09s 15.92t Elapsed: 00:00:00
Total cpu time: 15.83u 0.09s 15.92t Elapsed: 00:00:00
Start: Fri May 10 11:03:05 2013 End: Fri May 10 11:03:05 2013