BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 039144
(208 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SIB4|WOX3_ARATH WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana GN=WOX3 PE=2
SV=1
Length = 244
Score = 162 bits (410), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 131/249 (52%), Gaps = 57/249 (22%)
Query: 1 MSPAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNH 60
MSP STRWCPTPEQLMILEEMYRSG+RTPNA QIQ ITAHL+ +G+IEGKNVFYWFQNH
Sbjct: 1 MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH 60
Query: 61 KARERQKLRRKLGKQLQ------------------------------LQQQQQIFQHHHH 90
KAR+RQKLR+KL KQL + HHH+
Sbjct: 61 KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHN 120
Query: 91 LQQCCQVPNHHQQLLHCSFQSPPAGGSFSNPAKVLTQGMLTEDASTKTMS-YTWKKGIQE 149
P H CS SP + QG +A +K M+ Y K E
Sbjct: 121 HHHNHHRPYDHMSFDCCSHPSPMC---------LPHQGTGVGEAPSKVMNEYYCTKSGAE 171
Query: 150 RVEMEKSLMG---MYGRDWKMMVDVA--------PRSLQPCCS------KPPLRTLELFP 192
+ M+KS+ G YGRDW MM+D+ S CC+ K PL+TLELFP
Sbjct: 172 EILMQKSITGPNSSYGRDWMMMMDMGPRPSYPSSSSSPISCCNMMMSSPKIPLKTLELFP 231
Query: 193 ITATNLKEE 201
I++ N K++
Sbjct: 232 ISSINSKQD 240
>sp|A2XZR3|WOX2_ORYSI Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica
GN=WOX2 PE=3 SV=1
Length = 286
Score = 130 bits (326), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARER 65
+TRWCPTPEQLM+LEEMYR G+RTPNA+QIQ ITAHLS +G+IEGKNVFYWFQNHKAR+R
Sbjct: 25 TTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDR 84
Query: 66 QKLRRKL 72
QKLRR+L
Sbjct: 85 QKLRRRL 91
>sp|Q5W7C3|WOX2_ORYSJ Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp.
japonica GN=WOX2 PE=3 SV=1
Length = 286
Score = 129 bits (325), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 64/67 (95%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARER 65
+TRWCPTPEQLM+LEEMYR G+RTPNA+QIQ ITAHLS +G+IEGKNVFYWFQNHKAR+R
Sbjct: 25 TTRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDR 84
Query: 66 QKLRRKL 72
QKLRR+L
Sbjct: 85 QKLRRRL 91
>sp|Q70UV1|WOX3A_MAIZE WUSCHEL-related homeobox 3A OS=Zea mays GN=WOX3A PE=2 SV=1
Length = 262
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 55/56 (98%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
STRWCPTPEQLMILEEMYRSGVRTPNA++IQ ITAHL+++G+IEGKNVFYWFQNHK
Sbjct: 6 STRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 176 LQPCCSKPPLRTLELFPITATNLKEE 201
L PCC +P L+TL+LFP +T LK+E
Sbjct: 224 LPPCCRRP-LKTLDLFPTKSTGLKDE 248
>sp|Q6S3I3|WOX3B_MAIZE WUSCHEL-related homeobox 3B OS=Zea mays GN=WOX3B PE=2 SV=1
Length = 265
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 55/56 (98%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
STRWCPTPEQLMILEEMYRSGVRTPNA++IQ ITAHL+++G+IEGKNVFYWFQNHK
Sbjct: 6 STRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
Score = 33.5 bits (75), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 18/24 (75%)
Query: 178 PCCSKPPLRTLELFPITATNLKEE 201
P C + PL+TL+LFP +T LK+E
Sbjct: 228 PACCRRPLKTLDLFPTKSTGLKDE 251
>sp|Q33DK1|WOX3_ORYSJ WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. japonica
GN=WOX3 PE=1 SV=1
Length = 203
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 55/56 (98%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
STRWCPTPEQLMILEEMYRSGVRTPNA++IQ ITAHL+++G+IEGKNVFYWFQNHK
Sbjct: 6 STRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|A2ZH47|WOX3_ORYSI WUSCHEL-related homeobox 3 OS=Oryza sativa subsp. indica GN=WOX3
PE=3 SV=1
Length = 203
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 55/56 (98%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
STRWCPTPEQLMILEEMYRSGVRTPNA++IQ ITAHL+++G+IEGKNVFYWFQNHK
Sbjct: 6 STRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61
>sp|Q6X7K0|WOX1_ARATH WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana GN=WOX1 PE=2
SV=2
Length = 350
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARER 65
S+RW PTP+QL +LEE+YR G RTP+A IQ ITA L +GKIEGKNVFYWFQNHKARER
Sbjct: 74 SSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARER 133
Query: 66 QKLRRKL 72
QK RR++
Sbjct: 134 QKRRRQM 140
>sp|Q6X7J9|WOX4_ARATH WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana GN=WOX4 PE=2
SV=1
Length = 251
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%)
Query: 5 GSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
G TRW PT EQ+ ILE +Y+ G+RTPNA QI+HIT L +GKIEGKNVFYWFQNHKARE
Sbjct: 87 GGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARE 146
Query: 65 RQKLRR 70
RQK +R
Sbjct: 147 RQKQKR 152
>sp|Q7XTV3|WOX4_ORYSJ WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. japonica GN=WOX4
PE=2 SV=2
Length = 236
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 4 AGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
AG+TRW P+ EQ+ +LE +YR G+RTPN+ QI+ IT L +G+IEGKNVFYWFQNHKAR
Sbjct: 88 AGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKAR 147
Query: 64 ERQKLRR 70
ERQK +R
Sbjct: 148 ERQKQKR 154
>sp|Q25AM2|WOX4_ORYSI WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica GN=WOX4
PE=3 SV=1
Length = 236
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 44/67 (65%), Positives = 55/67 (82%)
Query: 4 AGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
AG+TRW P+ EQ+ +LE +YR G+RTPN+ QI+ IT L +G+IEGKNVFYWFQNHKAR
Sbjct: 88 AGTTRWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKAR 147
Query: 64 ERQKLRR 70
ERQK +R
Sbjct: 148 ERQKQKR 154
>sp|Q6YBV1|WUS_ANTMA Protein WUSCHEL OS=Antirrhinum majus GN=WUS PE=2 SV=1
Length = 281
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 69/116 (59%), Gaps = 22/116 (18%)
Query: 6 STRWCPTPEQLMILEEMY-RSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
STRW PT +Q+ IL+++Y +GVR+P A QIQ I+A L +GKIEGKNVFYWFQNHKARE
Sbjct: 38 STRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARE 97
Query: 65 RQKLRRKLGKQLQLQQQQQIFQHHHHLQQCCQVPNHHQQLLHCSFQSPPAGGSFSN 120
RQK R HHHH+ + NHH ++ PP FSN
Sbjct: 98 RQKKRFTA-------------DHHHHM-NVPTIHNHH-------YKPPPVYNKFSN 132
>sp|Q8H1D2|WOX5_ARATH WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana GN=WOX5 PE=2
SV=1
Length = 182
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 57/83 (68%), Gaps = 10/83 (12%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
RW PT EQL IL +++R+G+RTP QIQ I+ LS +GKIE KNVFYWFQNHKARERQK
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83
Query: 68 LRRKLGKQLQLQQQQQIFQHHHH 90
RRK+ F HHHH
Sbjct: 84 -RRKISID---------FDHHHH 96
>sp|Q6X7K1|WOX2_ARATH WUSCHEL-related homeobox 2 OS=Arabidopsis thaliana GN=WOX2 PE=2
SV=1
Length = 260
Score = 97.8 bits (242), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 4 AGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
A S+RW PT +Q+ +LE +Y+ G+RTP+A QIQ IT L +G IEGKNVFYWFQNHKAR
Sbjct: 10 ASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKAR 69
Query: 64 ERQK 67
+RQK
Sbjct: 70 QRQK 73
>sp|Q9SB92|WUS_ARATH Protein WUSCHEL OS=Arabidopsis thaliana GN=WUS PE=1 SV=2
Length = 292
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 6 STRWCPTPEQLMILEEMY-RSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
STRW PT EQ+ IL+E+Y + +R+P A QIQ ITA L FGKIEGKNVFYWFQNHKARE
Sbjct: 36 STRWTPTTEQIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARE 95
Query: 65 RQKLR 69
RQK R
Sbjct: 96 RQKKR 100
>sp|Q8LL11|WUS_PETHY Protein WUSCHEL OS=Petunia hybrida GN=WUS PE=2 SV=1
Length = 307
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/65 (67%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 6 STRWCPTPEQLMILEEMY-RSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
STRW PT +Q+ IL+++Y +GVR+P A QIQ I+A L +GKIEGKNVFYWFQNHKARE
Sbjct: 45 STRWTPTTDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARE 104
Query: 65 RQKLR 69
RQK R
Sbjct: 105 RQKKR 109
>sp|Q7XM13|WOX1A_ORYSJ WUSCHEL-related homeobox 1A OS=Oryza sativa subsp. japonica
GN=WOX1A PE=2 SV=2
Length = 289
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 3 PAGSTRWCPTPEQLMILEEMYRS-GVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
P+G TRW PT EQ+ IL E+Y S G+R+PN+ QIQ I A L +G+IEGKNVFYWFQNHK
Sbjct: 31 PSG-TRWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHK 89
Query: 62 ARERQKLR 69
ARERQK R
Sbjct: 90 ARERQKKR 97
>sp|Q33DK0|WOX1B_ORYSJ WUSCHEL-related homeobox 1B OS=Oryza sativa subsp. japonica
GN=WOX1B PE=1 SV=2
Length = 289
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Query: 3 PAGSTRWCPTPEQLMILEEMYRS-GVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
P+G TRW PT EQ+ IL E+Y S G+R+PN+ QIQ I A L +G+IEGKNVFYWFQNHK
Sbjct: 31 PSG-TRWTPTTEQIKILRELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHK 89
Query: 62 ARERQKLR 69
ARERQK R
Sbjct: 90 ARERQKKR 97
>sp|Q84VT7|WUS_SOLLC Protein WUSCHEL OS=Solanum lycopersicum GN=WUS PE=2 SV=1
Length = 272
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Query: 6 STRWCPTPEQLMILEEMY-RSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARE 64
S+RW PT +Q+ IL+++Y +GVR+P A QIQ I+A L +GKIEGKNVFYWFQNHKARE
Sbjct: 24 SSRWTPTSDQIRILKDLYYNNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARE 83
Query: 65 RQKLR 69
RQK R
Sbjct: 84 RQKKR 88
>sp|Q8W0F1|WOX9_ORYSJ WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica
GN=WOX9 PE=2 SV=1
Length = 200
Score = 94.0 bits (232), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 52/66 (78%), Gaps = 2/66 (3%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARER-- 65
RW PT EQ+ +L E++R+G+RTP+ QIQ I+ HLS FGK+E KNVFYWFQNHKARER
Sbjct: 14 RWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 73
Query: 66 QKLRRK 71
K RR+
Sbjct: 74 HKKRRR 79
>sp|Q9ZVF5|WOX6_ARATH WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana GN=WOX6 PE=2
SV=2
Length = 271
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 3 PAGST-RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
PA +T RW PTPEQ+ LEE+YRSG RTP QIQ I + L +G+IEGKNVFYWFQNHK
Sbjct: 55 PAAATLRWNPTPEQITTLEELYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHK 114
Query: 62 A 62
A
Sbjct: 115 A 115
>sp|Q9FFK0|WOX7_ARATH WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana GN=WOX7 PE=2
SV=1
Length = 122
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 52/67 (77%)
Query: 4 AGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKAR 63
A RW PT EQ+ +L +++++G+RTP+ QIQ I+ LS +GKIE KNVFYWFQNHKAR
Sbjct: 25 AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKAR 84
Query: 64 ERQKLRR 70
ERQK R+
Sbjct: 85 ERQKCRK 91
>sp|Q8LR86|WOX5_ORYSJ WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. japonica
GN=WOX5 PE=2 SV=1
Length = 313
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 43/57 (75%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKA 62
+ RW PT EQ+ +LE +YR G+RTP A QIQ ITA L G IEGKNVFYWFQNHKA
Sbjct: 42 NARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|A2WWU7|WOX5_ORYSI WUSCHEL-related homeobox 5 OS=Oryza sativa subsp. indica GN=WOX5
PE=3 SV=1
Length = 313
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 43/57 (75%)
Query: 6 STRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKA 62
+ RW PT EQ+ +LE +YR G+RTP A QIQ ITA L G IEGKNVFYWFQNHKA
Sbjct: 42 NARWTPTKEQIAVLEGLYRQGLRTPTAEQIQQITARLREHGHIEGKNVFYWFQNHKA 98
>sp|Q6X7J4|WOX9_ARATH WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana GN=WOX9 PE=2
SV=1
Length = 378
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%)
Query: 2 SPAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHK 61
SP RW P PEQ+ ILE ++ SG+ P +I+ I A L +G++ NVFYWFQN K
Sbjct: 49 SPEPKPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRK 108
Query: 62 ARERQKLR 69
+R + KLR
Sbjct: 109 SRSKHKLR 116
>sp|Q6X7J5|WOX8_ARATH WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana GN=WOX8 PE=2
SV=1
Length = 325
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%)
Query: 3 PAGSTRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKA 62
P RW P PEQ+ ILE ++ SG P +IQ I L +G+I NVFYWFQN K+
Sbjct: 50 PDPKPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKS 109
Query: 63 RERQKLR 69
R + KLR
Sbjct: 110 RAKHKLR 116
>sp|Q0JKK6|WOX7_ORYSJ WUSCHEL-related homeobox 7 OS=Oryza sativa subsp. japonica GN=WOX7
PE=2 SV=2
Length = 533
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
RW P PEQ+ ILE ++ SG+ P +I I L +G++ NVFYWFQN K+R + K
Sbjct: 69 RWNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSKNK 128
Query: 68 LR 69
LR
Sbjct: 129 LR 130
>sp|A3B6V0|WOX12_ORYSJ WUSCHEL-related homeobox 12 OS=Oryza sativa subsp. japonica
GN=WOX12 PE=2 SV=2
Length = 515
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
RW P PEQ+ ILE ++ SG+ P +I+ I L +G++ NVFYWFQN K+R + K
Sbjct: 72 RWNPRPEQIRILEGIFNSGMVNPPRDEIRRIRLQLQEYGQVGDANVFYWFQNRKSRTKNK 131
Query: 68 L 68
L
Sbjct: 132 L 132
>sp|Q5QMM3|WOX8_ORYSJ WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica GN=WOX8
PE=2 SV=1
Length = 267
Score = 67.0 bits (162), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
RW PTP QL ILE ++ G TP+ +I+ ITA LS G+I NV+ WFQN +AR ++K
Sbjct: 92 RWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRK 151
>sp|O81788|WOX13_ARATH WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana GN=WOX13 PE=2
SV=1
Length = 268
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
RW PTP QL ILE ++ G TP+ +I+ IT LS G+I +NV+ WFQN +AR ++K
Sbjct: 99 RWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRK 158
>sp|A3BKM2|WOX13_ORYSJ WUSCHEL-related homeobox 13 OS=Oryza sativa subsp. japonica
GN=WOX13 PE=2 SV=1
Length = 306
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
R P PEQ+ ILE ++ SG+ P +I I L +G++ NVFYWFQN K+R + K
Sbjct: 136 RRNPRPEQIRILEAIFNSGMVNPPRDEIPRIRMQLQEYGQVGDANVFYWFQNRKSRSKNK 195
Query: 68 LR 69
LR
Sbjct: 196 LR 197
>sp|Q9LM84|WOX14_ARATH WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana GN=WOX14 PE=2
SV=1
Length = 211
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 37/60 (61%)
Query: 8 RWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
RW PT QL ILE +Y G TPN +I+ I LS G+I NV+ WFQN +AR ++K
Sbjct: 95 RWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRK 154
>sp|Q6Z3L4|WOX10_ORYSJ WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. japonica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN
Sbjct: 42 SRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>sp|A2YST1|WOX10_ORYSI WUSCHEL-related homeobox 10 OS=Oryza sativa subsp. indica
GN=WOX10 PE=2 SV=1
Length = 284
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN
Sbjct: 42 SRWAPKPEQILILESIFNSGMVNPAKDETARIRRLLERFGAVRDANVFYWFQN 94
>sp|Q10M29|WOX6_ORYSJ WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. japonica
GN=WOX6 PE=2 SV=1
Length = 328
Score = 60.5 bits (145), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN
Sbjct: 41 SRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|A2XG77|WOX6_ORYSI WUSCHEL-related homeobox 6 OS=Oryza sativa subsp. indica GN=WOX6
PE=2 SV=1
Length = 328
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN
Sbjct: 41 SRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 93
>sp|Q0D3I7|WOX11_ORYSJ WUSCHEL-related homeobox 11 OS=Oryza sativa subsp. japonica
GN=WOX11 PE=2 SV=1
Length = 262
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN
Sbjct: 21 SRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQN 73
>sp|Q9LM83|WOX10_ARATH Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana
GN=WOX10 PE=3 SV=1
Length = 197
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 15 QLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK 67
QL ILE +Y+ G TPN +I+ IT LS G+I KNV++WFQN +AR ++K
Sbjct: 86 QLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRK 138
>sp|Q8GY25|WOX12_ARATH WUSCHEL-related homeobox 12 OS=Arabidopsis thaliana GN=WOX12 PE=2
SV=1
Length = 268
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
RW P PEQ++ILE ++ SG P + I L FG + NVFYWFQN
Sbjct: 20 ARWSPKPEQILILESIFNSGTVNPPKDETVRIRKMLEKFGAVGDANVFYWFQN 72
>sp|Q6X7J3|WOX11_ARATH WUSCHEL-related homeobox 11 OS=Arabidopsis thaliana GN=WOX11 PE=2
SV=2
Length = 268
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 7 TRWCPTPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQN 59
+RW P PEQ++ILE ++ SG+ P + I L FG + NVFYWFQN
Sbjct: 32 SRWSPKPEQILILESIFHSGMVNPPKEETVRIRKMLEKFGAVGDANVFYWFQN 84
>sp|Q5QMZ9|HOX29_ORYSJ Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp.
japonica GN=HOX29 PE=2 SV=2
Length = 868
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK---- 67
TPEQ+ LE +Y + P++ + Q + ++ K + WFQN + RE+Q+
Sbjct: 17 TPEQVEALERLYYECPK-PSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKESS 75
Query: 68 ----LRRKL----------GKQLQLQQQQQIFQHHHH 90
L RKL +LQ Q Q ++ H H
Sbjct: 76 RLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRH 112
>sp|A2WLR5|HOX29_ORYSI Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica
GN=HOX29 PE=2 SV=2
Length = 861
Score = 42.0 bits (97), Expect = 0.003, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK---- 67
TPEQ+ LE +Y + P++ + Q + ++ K + WFQN + RE+Q+
Sbjct: 10 TPEQVEALERLYYECPK-PSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKESS 68
Query: 68 ----LRRKL----------GKQLQLQQQQQIFQHHHH 90
L RKL +LQ Q Q ++ H H
Sbjct: 69 RLQALNRKLTAMNKLLMEENDRLQKQVSQLVYDHGRH 105
>sp|Q2QM96|HOX33_ORYSJ Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp.
japonica GN=HOX33 PE=2 SV=1
Length = 855
Score = 39.7 bits (91), Expect = 0.016, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQKLRRK 71
TPEQ+ LE +Y + P++ + Q + IE K + WFQN + RE+Q RK
Sbjct: 34 TPEQVEALERVYTECPK-PSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---RK 89
Query: 72 LGKQLQL------QQQQQIFQHHHHLQQCCQVPNHHQQLLHCSFQSPPAGGSFSNPAKVL 125
+LQ + + + + LQ+ + + +P A + ++ V+
Sbjct: 90 EASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTSCESVV 149
Query: 126 TQG 128
T G
Sbjct: 150 TSG 152
>sp|A2ZMN9|HOX33_ORYSI Homeobox-leucine zipper protein HOX33 OS=Oryza sativa subsp. indica
GN=HOX33 PE=2 SV=2
Length = 855
Score = 39.7 bits (91), Expect = 0.016, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQKLRRK 71
TPEQ+ LE +Y + P++ + Q + IE K + WFQN + RE+Q RK
Sbjct: 34 TPEQVEALERVYTECPK-PSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---RK 89
Query: 72 LGKQLQL------QQQQQIFQHHHHLQQCCQVPNHHQQLLHCSFQSPPAGGSFSNPAKVL 125
+LQ + + + + LQ+ + + +P A + ++ V+
Sbjct: 90 EASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTSCESVV 149
Query: 126 TQG 128
T G
Sbjct: 150 TSG 152
>sp|Q9AV49|HOX9_ORYSJ Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp.
japonica GN=HOX9 PE=2 SV=1
Length = 840
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQKLRRK 71
TPEQ+ LE +Y + P++S+ Q + IE K + WFQN + R++Q RK
Sbjct: 34 TPEQVEALERVYAECPK-PSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQ---RK 89
Query: 72 LGKQLQLQQQ------QQIFQHHHHLQQCCQVPNHHQQLLHCSFQSPPAGGSFSNPAKVL 125
+LQ + + + + + LQ+ H + Q+P G S + V
Sbjct: 90 EASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSCESNVT 149
Query: 126 TQGMLTEDAS 135
T DAS
Sbjct: 150 TPQNPLRDAS 159
>sp|A2Z8L4|HOX9_ORYSI Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica
GN=HOX9 PE=2 SV=2
Length = 840
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 10/130 (7%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQKLRRK 71
TPEQ+ LE +Y + P++S+ Q + IE K + WFQN + R++Q RK
Sbjct: 34 TPEQVEALERVYAECPK-PSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQ---RK 89
Query: 72 LGKQLQLQQQ------QQIFQHHHHLQQCCQVPNHHQQLLHCSFQSPPAGGSFSNPAKVL 125
+LQ + + + + + LQ+ H + Q+P G S + V
Sbjct: 90 EASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGNDTSCESNVT 149
Query: 126 TQGMLTEDAS 135
T DAS
Sbjct: 150 TPQNPLRDAS 159
>sp|A2XBL9|HOX10_ORYSI Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp. indica
GN=HOX10 PE=2 SV=2
Length = 839
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK---- 67
TPEQ+ LE +Y + P +S+ Q + IE K + WFQN + R++Q+
Sbjct: 32 TPEQVEALERVY-ADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKESS 90
Query: 68 ----LRRKL----------GKQLQLQQQQQIFQHHHHLQQCCQVPNHHQQLLHCSFQSP- 112
+ RKL ++LQ Q Q + ++ H QQ P + + +P
Sbjct: 91 RLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSCESNVTTPQ 150
Query: 113 -PAGGSFSNPAKVLTQGMLTEDASTKTMSYTWKKGIQ 148
P + SNP+ +L+ + E+ T+ +S I
Sbjct: 151 NPLRDA-SNPSGLLS---IAEETLTEFLSKATGTAID 183
>sp|Q6TAQ6|HOX10_ORYSJ Homeobox-leucine zipper protein HOX10 OS=Oryza sativa subsp.
japonica GN=HOX10 PE=2 SV=1
Length = 839
Score = 39.3 bits (90), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQK---- 67
TPEQ+ LE +Y + P +S+ Q + IE K + WFQN + R++Q+
Sbjct: 32 TPEQVEALERVY-ADCPKPTSSRRQQLLRECPILANIEPKQIKVWFQNRRCRDKQRKESS 90
Query: 68 ----LRRKL----------GKQLQLQQQQQIFQHHHHLQQCCQVPNHHQQLLHCSFQSP- 112
+ RKL ++LQ Q Q + ++ H QQ P + + +P
Sbjct: 91 RLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAHMRQQLQNTPLANDTSCESNVTTPQ 150
Query: 113 -PAGGSFSNPAKVLTQGMLTEDASTKTMSYTWKKGIQ 148
P + SNP+ +L+ + E+ T+ +S I
Sbjct: 151 NPLRDA-SNPSGLLS---IAEETLTEFLSKATGTAID 183
>sp|O04291|ATB14_ARATH Homeobox-leucine zipper protein ATHB-14 OS=Arabidopsis thaliana
GN=ATHB-14 PE=1 SV=1
Length = 852
Score = 38.9 bits (89), Expect = 0.026, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQKLRRK 71
TPEQ+ LE +Y + P++ + Q + IE K + WFQN + RE+Q RK
Sbjct: 30 TPEQVEALERVYTECPK-PSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---RK 85
Query: 72 LGKQLQ 77
+LQ
Sbjct: 86 EAARLQ 91
>sp|Q9ZU11|ATB15_ARATH Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana
GN=ATHB-15 PE=1 SV=1
Length = 836
Score = 37.4 bits (85), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 12 TPEQLMILEEMYRSGVRTPNASQIQHITAHLSHFGKIEGKNVFYWFQNHKARERQKLRRK 71
TPEQ+ LE +Y + P++ + Q + IE K + WFQN + RE+Q RK
Sbjct: 22 TPEQVEALERLYHDCPK-PSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ---RK 77
Query: 72 LGKQLQLQQQQQIFQHHHHLQQCCQVPNHHQQLLH 106
+LQ ++ + +++ ++ QL+H
Sbjct: 78 EASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVH 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.130 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,312,900
Number of Sequences: 539616
Number of extensions: 2954659
Number of successful extensions: 14394
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 11826
Number of HSP's gapped (non-prelim): 1928
length of query: 208
length of database: 191,569,459
effective HSP length: 112
effective length of query: 96
effective length of database: 131,132,467
effective search space: 12588716832
effective search space used: 12588716832
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)