Query 039148
Match_columns 82
No_of_seqs 108 out of 602
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 11:07:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/039148.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/039148hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fi2_A Oxalate oxidase, germin 99.8 1.3E-20 4.6E-25 129.0 9.1 82 1-82 116-197 (201)
2 2e9q_A 11S globulin subunit be 99.8 1.9E-19 6.3E-24 137.7 10.0 74 5-81 128-235 (459)
3 1fxz_A Glycinin G1; proglycini 99.8 2.4E-19 8.1E-24 137.5 9.2 74 5-81 114-227 (476)
4 3ksc_A LEGA class, prolegumin; 99.8 3.8E-19 1.3E-23 137.3 9.6 72 5-79 111-214 (496)
5 3qac_A 11S globulin SEED stora 99.8 4.3E-19 1.5E-23 136.1 9.8 74 5-81 131-237 (465)
6 3kgl_A Cruciferin; 11S SEED gl 99.8 8.6E-19 2.9E-23 134.5 10.0 77 1-81 365-443 (466)
7 3s7i_A Allergen ARA H 1, clone 99.8 1.7E-18 5.9E-23 131.1 10.1 76 1-79 83-168 (418)
8 2d5f_A Glycinin A3B4 subunit; 99.8 2.8E-18 9.7E-23 132.1 9.5 72 7-81 116-230 (493)
9 2e9q_A 11S globulin subunit be 99.7 4.3E-18 1.5E-22 130.2 8.1 77 1-81 364-442 (459)
10 3ksc_A LEGA class, prolegumin; 99.7 1.3E-17 4.5E-22 128.7 10.4 76 1-80 400-477 (496)
11 3c3v_A Arachin ARAH3 isoform; 99.7 9.3E-18 3.2E-22 129.8 9.4 73 6-81 128-269 (510)
12 2ea7_A 7S globulin-1; beta bar 99.7 1.7E-17 5.8E-22 125.9 10.3 75 2-79 101-185 (434)
13 1dgw_A Canavalin; duplicated s 99.7 2.6E-17 8.8E-22 111.2 9.6 74 4-80 83-166 (178)
14 3qac_A 11S globulin SEED stora 99.7 1.1E-17 3.8E-22 128.3 7.7 77 1-81 365-443 (465)
15 1uij_A Beta subunit of beta co 99.7 5.9E-17 2E-21 122.2 10.5 75 2-79 89-173 (416)
16 3fz3_A Prunin; TREE NUT allerg 99.7 3.1E-17 1.1E-21 127.5 9.0 72 7-81 175-297 (531)
17 2cav_A Protein (canavalin); vi 99.7 5.9E-17 2E-21 123.3 9.8 74 4-80 128-211 (445)
18 3s7i_A Allergen ARA H 1, clone 99.7 7.7E-17 2.6E-21 122.1 8.3 75 2-81 330-408 (418)
19 3c3v_A Arachin ARAH3 isoform; 99.7 2.8E-16 9.4E-21 121.6 10.6 77 1-81 414-492 (510)
20 3kgl_A Cruciferin; 11S SEED gl 99.7 1.6E-16 5.6E-21 121.9 9.1 72 7-81 148-245 (466)
21 1fxz_A Glycinin G1; proglycini 99.7 3.6E-16 1.2E-20 119.9 10.6 77 1-81 380-458 (476)
22 2cav_A Protein (canavalin); vi 99.7 4E-16 1.4E-20 118.7 9.8 73 3-80 335-411 (445)
23 2phl_A Phaseolin; plant SEED s 99.7 3.4E-16 1.2E-20 117.9 9.2 73 4-79 94-181 (397)
24 1uij_A Beta subunit of beta co 99.7 5.4E-16 1.8E-20 117.0 10.0 75 2-81 305-383 (416)
25 2phl_A Phaseolin; plant SEED s 99.6 4.2E-16 1.4E-20 117.4 7.7 79 1-81 287-371 (397)
26 2d5f_A Glycinin A3B4 subunit; 99.6 3.4E-16 1.2E-20 120.5 7.1 76 1-81 409-484 (493)
27 2ea7_A 7S globulin-1; beta bar 99.6 1.8E-15 6.3E-20 114.7 10.3 74 2-80 321-398 (434)
28 3fz3_A Prunin; TREE NUT allerg 99.6 6.3E-16 2.1E-20 120.2 7.7 76 1-81 436-514 (531)
29 2vqa_A SLL1358 protein, MNCA; 99.4 2.8E-13 9.4E-18 98.2 7.6 75 3-81 277-351 (361)
30 2vqa_A SLL1358 protein, MNCA; 99.2 6.2E-11 2.1E-15 85.8 6.9 72 5-80 97-171 (361)
31 1dgw_Y Canavalin; duplicated s 99.1 1.1E-09 3.8E-14 68.3 9.5 73 3-80 5-81 (93)
32 1j58_A YVRK protein; cupin, de 99.0 5.2E-10 1.8E-14 81.8 7.0 73 5-81 302-374 (385)
33 1j58_A YVRK protein; cupin, de 98.8 3E-09 1E-13 77.8 4.2 73 4-80 122-196 (385)
34 3h8u_A Uncharacterized conserv 98.1 1.1E-05 3.7E-10 49.8 6.2 40 6-45 81-120 (125)
35 1x82_A Glucose-6-phosphate iso 97.9 4.1E-05 1.4E-09 51.5 6.6 39 3-41 118-156 (190)
36 2ozi_A Hypothetical protein RP 97.8 2.1E-05 7.3E-10 48.2 4.1 32 6-37 61-92 (98)
37 2oa2_A BH2720 protein; 1017534 97.8 6.2E-05 2.1E-09 48.2 6.4 38 4-41 88-125 (148)
38 2xlg_A SLL1785 protein, CUCA; 97.8 3.9E-05 1.3E-09 54.0 5.3 37 2-38 100-137 (239)
39 2fqp_A Hypothetical protein BP 97.8 4.3E-05 1.5E-09 45.7 4.8 33 5-37 60-92 (97)
40 3ht1_A REMF protein; cupin fol 97.7 9.6E-05 3.3E-09 46.1 6.4 41 5-45 80-120 (145)
41 1v70_A Probable antibiotics sy 97.7 0.00012 4.2E-09 42.7 5.9 35 5-39 68-102 (105)
42 3l2h_A Putative sugar phosphat 97.7 0.00012 3.9E-09 47.3 6.2 38 5-42 87-125 (162)
43 2gu9_A Tetracenomycin polyketi 97.6 0.00012 4.2E-09 43.5 5.5 36 5-40 63-98 (113)
44 1lr5_A Auxin binding protein 1 97.6 8.4E-05 2.9E-09 48.1 4.9 38 5-42 89-127 (163)
45 3es1_A Cupin 2, conserved barr 97.6 0.00012 4.2E-09 49.4 5.3 38 5-43 119-156 (172)
46 3lag_A Uncharacterized protein 97.5 8.8E-05 3E-09 45.2 3.7 31 7-37 62-92 (98)
47 2opk_A Hypothetical protein; p 97.5 0.00017 5.7E-09 44.5 5.0 34 6-39 75-109 (112)
48 2f4p_A Hypothetical protein TM 97.5 0.00046 1.6E-08 44.3 7.0 55 6-67 89-143 (147)
49 3ibm_A Cupin 2, conserved barr 97.5 0.00027 9.3E-09 46.6 5.9 38 5-42 95-133 (167)
50 1o4t_A Putative oxalate decarb 97.5 0.00025 8.4E-09 44.7 5.5 34 5-38 97-130 (133)
51 3cew_A Uncharacterized cupin p 97.4 0.00034 1.2E-08 43.1 5.9 37 5-41 67-103 (125)
52 2bnm_A Epoxidase; oxidoreducta 97.4 0.00029 1E-08 46.4 5.6 34 5-38 163-197 (198)
53 1vj2_A Novel manganese-contain 97.4 0.00033 1.1E-08 43.5 5.3 35 5-39 87-121 (126)
54 3nw4_A Gentisate 1,2-dioxygena 97.4 0.00029 9.9E-09 52.6 5.5 36 5-40 143-178 (368)
55 2b8m_A Hypothetical protein MJ 97.4 0.00033 1.1E-08 42.6 4.9 31 7-37 69-99 (117)
56 3i7d_A Sugar phosphate isomera 97.3 0.0006 2.1E-08 44.6 6.4 39 5-43 84-124 (163)
57 4e2g_A Cupin 2 conserved barre 97.3 0.00049 1.7E-08 42.1 5.5 35 5-40 80-114 (126)
58 4i4a_A Similar to unknown prot 97.3 0.00052 1.8E-08 42.1 5.5 34 5-38 73-106 (128)
59 3jzv_A Uncharacterized protein 97.3 0.00047 1.6E-08 45.7 5.6 37 5-41 92-128 (166)
60 3kgz_A Cupin 2 conserved barre 97.3 0.00074 2.5E-08 44.2 6.3 38 5-42 83-120 (156)
61 2d40_A Z3393, putative gentisa 97.2 0.00042 1.4E-08 50.8 5.2 36 5-40 140-175 (354)
62 1y9q_A Transcriptional regulat 97.2 0.00046 1.6E-08 45.5 4.8 32 6-38 146-177 (192)
63 1rc6_A Hypothetical protein YL 97.2 0.00056 1.9E-08 47.5 5.4 36 5-40 219-255 (261)
64 3bu7_A Gentisate 1,2-dioxygena 97.1 0.00069 2.4E-08 50.9 5.6 36 5-40 163-199 (394)
65 1vr3_A Acireductone dioxygenas 97.1 0.0011 3.8E-08 45.5 6.2 40 3-42 126-165 (191)
66 3h7j_A Bacilysin biosynthesis 97.1 0.001 3.4E-08 45.9 5.7 34 6-39 186-219 (243)
67 1zrr_A E-2/E-2' protein; nicke 97.0 0.00077 2.6E-08 45.7 4.2 39 3-41 121-159 (179)
68 2o8q_A Hypothetical protein; c 96.9 0.0019 6.4E-08 40.0 5.5 36 5-41 84-119 (134)
69 2pfw_A Cupin 2, conserved barr 96.9 0.0022 7.4E-08 38.5 5.5 34 5-40 73-106 (116)
70 2vpv_A Protein MIF2, MIF2P; nu 96.9 0.0018 6.2E-08 43.5 5.5 33 6-38 130-162 (166)
71 1y3t_A Hypothetical protein YX 96.9 0.002 6.7E-08 45.4 5.8 37 5-42 258-294 (337)
72 1sef_A Conserved hypothetical 96.9 0.0018 6.2E-08 45.4 5.6 35 5-39 222-257 (274)
73 2q30_A Uncharacterized protein 96.9 0.0016 5.5E-08 38.5 4.6 26 6-31 76-101 (110)
74 3fjs_A Uncharacterized protein 96.8 0.0019 6.5E-08 39.6 4.8 35 5-39 75-109 (114)
75 3lwc_A Uncharacterized protein 96.8 0.0018 6.3E-08 40.5 4.7 34 5-39 78-111 (119)
76 1sfn_A Conserved hypothetical 96.8 0.0024 8.3E-08 44.2 5.6 35 6-40 206-240 (246)
77 1sq4_A GLXB, glyoxylate-induce 96.8 0.002 7E-08 45.6 5.1 41 5-45 231-272 (278)
78 3d82_A Cupin 2, conserved barr 96.7 0.0019 6.6E-08 37.6 3.7 25 5-29 69-93 (102)
79 1sq4_A GLXB, glyoxylate-induce 96.6 0.0037 1.3E-07 44.2 5.4 35 5-39 109-143 (278)
80 1yhf_A Hypothetical protein SP 96.5 0.0049 1.7E-07 36.8 5.0 30 6-37 80-109 (115)
81 3eqe_A Putative cystein deoxyg 96.5 0.0053 1.8E-07 41.2 5.5 39 5-43 118-156 (171)
82 4axo_A EUTQ, ethanolamine util 96.5 0.0041 1.4E-07 41.1 4.9 33 5-39 103-135 (151)
83 1rc6_A Hypothetical protein YL 96.4 0.0051 1.7E-07 42.6 5.3 35 5-39 100-134 (261)
84 2i45_A Hypothetical protein; n 96.4 0.003 1E-07 37.7 3.6 29 5-35 68-96 (107)
85 3bu7_A Gentisate 1,2-dioxygena 96.4 0.0051 1.8E-07 46.2 5.5 36 5-40 333-369 (394)
86 1o5u_A Novel thermotoga mariti 96.4 0.003 1E-07 38.6 3.5 28 6-33 70-97 (101)
87 1juh_A Quercetin 2,3-dioxygena 96.3 0.0065 2.2E-07 44.2 5.3 34 5-39 95-128 (350)
88 1sef_A Conserved hypothetical 96.3 0.0067 2.3E-07 42.4 5.1 35 5-39 103-137 (274)
89 2ozj_A Cupin 2, conserved barr 96.1 0.0096 3.3E-07 35.7 4.7 31 5-37 77-107 (114)
90 3h7j_A Bacilysin biosynthesis 96.1 0.007 2.4E-07 41.6 4.3 36 5-40 73-109 (243)
91 4e2q_A Ureidoglycine aminohydr 96.0 0.012 4.2E-07 42.0 5.6 35 5-39 226-260 (266)
92 1y3t_A Hypothetical protein YX 95.9 0.015 5E-07 40.9 5.6 35 6-41 87-121 (337)
93 4gjz_A Lysine-specific demethy 95.8 0.014 4.8E-07 38.7 4.9 31 4-36 201-231 (235)
94 1vrb_A Putative asparaginyl hy 95.8 0.015 5E-07 42.5 5.2 35 4-38 218-252 (342)
95 3k2o_A Bifunctional arginine d 95.7 0.019 6.6E-07 42.0 5.6 41 3-43 255-295 (336)
96 2pyt_A Ethanolamine utilizatio 95.7 0.016 5.5E-07 36.9 4.6 32 6-39 95-126 (133)
97 2d40_A Z3393, putative gentisa 95.7 0.012 4.2E-07 43.0 4.4 33 5-39 307-339 (354)
98 3kv4_A PHD finger protein 8; e 95.3 0.031 1.1E-06 42.6 5.6 41 3-43 300-340 (447)
99 2arc_A ARAC, arabinose operon 95.2 0.045 1.6E-06 33.9 5.4 29 5-33 57-86 (164)
100 3bcw_A Uncharacterized protein 95.2 0.018 6.1E-07 36.3 3.4 28 6-33 89-116 (123)
101 2yu1_A JMJC domain-containing 95.1 0.036 1.2E-06 42.3 5.5 42 3-44 265-306 (451)
102 3al5_A HTYW5, JMJC domain-cont 95.0 0.054 1.8E-06 39.2 5.9 33 3-37 239-271 (338)
103 3d8c_A Hypoxia-inducible facto 95.0 0.072 2.5E-06 38.8 6.6 40 3-42 260-300 (349)
104 3k3o_A PHF8, PHD finger protei 94.9 0.032 1.1E-06 41.7 4.5 41 3-43 216-256 (371)
105 3kv5_D JMJC domain-containing 94.8 0.034 1.1E-06 42.7 4.5 40 3-42 335-374 (488)
106 4diq_A Lysine-specific demethy 94.7 0.058 2E-06 41.7 5.7 38 4-41 228-265 (489)
107 3rns_A Cupin 2 conserved barre 94.7 0.047 1.6E-06 37.1 4.7 25 5-29 192-217 (227)
108 3kv9_A JMJC domain-containing 94.6 0.04 1.4E-06 41.6 4.5 41 3-43 244-284 (397)
109 3pua_A GRC5, PHD finger protei 94.5 0.043 1.5E-06 41.3 4.5 41 3-43 243-283 (392)
110 4h7l_A Uncharacterized protein 94.4 0.069 2.3E-06 35.5 4.9 31 5-39 87-117 (157)
111 2y0o_A Probable D-lyxose ketol 94.3 0.046 1.6E-06 37.0 3.8 35 6-42 121-155 (175)
112 2gm6_A Cysteine dioxygenase ty 94.2 0.092 3.2E-06 35.9 5.3 36 5-40 129-167 (208)
113 4b29_A Dimethylsulfoniopropion 94.0 0.1 3.5E-06 36.4 5.2 34 6-40 173-206 (217)
114 1yfu_A 3-hydroxyanthranilate-3 93.8 0.096 3.3E-06 35.6 4.7 24 5-28 78-101 (174)
115 1sfn_A Conserved hypothetical 93.6 0.088 3E-06 36.2 4.3 32 5-38 87-118 (246)
116 1juh_A Quercetin 2,3-dioxygena 93.4 0.13 4.4E-06 37.3 5.1 33 6-39 293-325 (350)
117 3eln_A Cysteine dioxygenase ty 93.3 0.19 6.6E-06 34.2 5.6 39 5-43 122-162 (200)
118 2q1z_B Anti-sigma factor CHRR, 93.1 0.11 3.6E-06 35.0 4.0 34 6-39 161-194 (195)
119 3pur_A Lysine-specific demethy 93.1 0.094 3.2E-06 40.9 4.1 39 4-42 366-404 (528)
120 3d0j_A Uncharacterized protein 93.1 0.097 3.3E-06 34.4 3.7 35 5-39 77-111 (140)
121 3rns_A Cupin 2 conserved barre 93.0 0.13 4.5E-06 34.8 4.4 31 5-37 76-106 (227)
122 3nw4_A Gentisate 1,2-dioxygena 92.9 0.18 6.2E-06 37.5 5.3 32 6-39 319-350 (368)
123 3st7_A Capsular polysaccharide 92.4 0.18 6.1E-06 35.5 4.6 28 12-39 327-354 (369)
124 1zvf_A 3-hydroxyanthranilate 3 92.4 0.27 9.1E-06 33.5 5.2 24 4-27 80-103 (176)
125 3ebr_A Uncharacterized RMLC-li 92.2 0.21 7.1E-06 32.7 4.4 35 7-41 81-117 (159)
126 2xdv_A MYC-induced nuclear ant 92.2 0.28 9.4E-06 37.1 5.6 26 4-29 199-224 (442)
127 3myx_A Uncharacterized protein 91.3 0.52 1.8E-05 33.1 5.9 33 6-39 85-117 (238)
128 3es4_A Uncharacterized protein 89.7 0.19 6.3E-06 31.8 2.2 19 6-24 82-100 (116)
129 4e2q_A Ureidoglycine aminohydr 89.5 0.48 1.7E-05 33.7 4.5 32 6-39 111-142 (266)
130 3uss_A Putative uncharacterize 88.4 0.95 3.3E-05 31.1 5.3 37 6-42 124-163 (211)
131 2qnk_A 3-hydroxyanthranilate 3 87.3 0.72 2.5E-05 33.5 4.2 25 5-29 74-98 (286)
132 2xxz_A Lysine-specific demethy 86.1 1.1 3.9E-05 32.9 4.8 33 3-35 278-310 (332)
133 3cjx_A Protein of unknown func 85.0 1.5 5E-05 28.9 4.6 33 7-39 83-117 (165)
134 3myx_A Uncharacterized protein 83.6 0.66 2.3E-05 32.5 2.5 18 5-22 206-223 (238)
135 3gbg_A TCP pilus virulence reg 82.0 2 7E-05 28.9 4.4 22 6-27 51-72 (276)
136 3avr_A Lysine-specific demethy 81.9 2 6.9E-05 33.5 4.8 33 3-35 337-369 (531)
137 1zx5_A Mannosephosphate isomer 81.7 0.69 2.3E-05 33.1 2.0 24 5-29 159-182 (300)
138 1qwr_A Mannose-6-phosphate iso 80.9 0.76 2.6E-05 33.1 2.0 20 5-24 159-178 (319)
139 2o1q_A Putative acetyl/propion 80.1 1.7 5.7E-05 27.5 3.3 33 6-40 86-119 (145)
140 1eyb_A Homogentisate 1,2-dioxy 78.4 2.8 9.5E-05 32.3 4.5 29 7-37 199-227 (471)
141 2wfp_A Mannose-6-phosphate iso 76.1 1.4 4.7E-05 32.8 2.2 20 5-24 241-260 (394)
142 4ask_A Lysine-specific demethy 75.1 3.2 0.00011 32.3 4.0 31 4-34 313-343 (510)
143 3esi_A Uncharacterized protein 67.7 3.5 0.00012 26.2 2.4 40 4-43 74-127 (129)
144 2ypd_A Probable JMJC domain-co 66.8 8.7 0.0003 28.9 4.7 39 4-42 293-331 (392)
145 4dpz_X HRAS-like suppressor 2; 65.8 3 0.0001 26.9 1.8 35 3-37 3-38 (137)
146 3ejk_A DTDP sugar isomerase; Y 65.0 22 0.00076 23.4 6.1 36 4-39 103-141 (174)
147 1pmi_A PMI, phosphomannose iso 63.7 3.7 0.00013 31.0 2.2 21 5-25 267-287 (440)
148 1tc3_C Protein (TC3 transposas 62.8 11 0.00038 17.9 3.4 24 58-81 21-44 (51)
149 2rg4_A Uncharacterized protein 62.8 9 0.00031 25.8 3.9 32 7-39 172-204 (216)
150 4dot_A Group XVI phospholipase 62.2 4.9 0.00017 26.0 2.3 34 3-36 3-37 (140)
151 2lkt_A Retinoic acid receptor 62.0 11 0.00038 23.0 3.9 33 6-38 6-39 (125)
152 3rcq_A Aspartyl/asparaginyl be 58.5 18 0.00063 24.4 4.8 39 6-45 148-186 (197)
153 2dkz_A Hypothetical protein LO 56.1 4.7 0.00016 24.2 1.3 30 48-80 45-74 (84)
154 3kmh_A D-lyxose isomerase; cup 54.6 26 0.00091 24.8 5.2 34 7-41 175-209 (246)
155 3dxt_A JMJC domain-containing 54.1 21 0.00073 26.4 4.9 33 3-35 261-293 (354)
156 3o14_A Anti-ecfsigma factor, C 52.9 24 0.00083 23.9 4.7 33 6-40 79-111 (223)
157 2ox0_A JMJC domain-containing 51.7 24 0.00083 26.3 4.9 33 3-35 279-311 (381)
158 2l7y_A Putative endo-beta-N-ac 49.8 12 0.00042 22.8 2.5 42 8-49 19-67 (98)
159 1zs4_A Regulatory protein CII; 46.8 14 0.00047 22.0 2.4 23 59-81 25-47 (83)
160 3opt_A DNA damage-responsive t 46.6 31 0.0011 25.7 4.7 32 3-34 304-335 (373)
161 1e5r_A Proline oxidase; oxidor 44.6 22 0.00074 25.5 3.5 63 5-68 141-216 (290)
162 4a0z_A Transcription factor FA 43.1 22 0.00077 23.5 3.2 23 56-78 24-46 (190)
163 1yud_A Hypothetical protein SO 42.9 34 0.0012 22.7 4.1 62 8-79 101-165 (170)
164 2qjv_A Uncharacterized IOLB-li 40.0 15 0.00051 26.1 2.1 19 6-25 214-232 (270)
165 1xn7_A Hypothetical protein YH 39.6 23 0.0008 20.2 2.6 20 59-78 17-36 (78)
166 1pmi_A PMI, phosphomannose iso 39.2 41 0.0014 25.2 4.4 32 6-38 402-437 (440)
167 2vec_A YHAK, pirin-like protei 39.0 56 0.0019 22.7 4.9 32 6-37 106-140 (256)
168 2k02_A Ferrous iron transport 38.1 19 0.00065 21.2 2.1 20 59-78 17-36 (87)
169 2kvv_A Putative excisionase; D 34.8 33 0.0011 20.1 2.7 22 59-80 11-32 (78)
170 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 33.6 1.1E+02 0.0037 20.5 5.6 42 4-45 109-150 (197)
171 2ixk_A DTDP-4-dehydrorhamnose 32.5 67 0.0023 21.2 4.3 26 11-37 110-135 (184)
172 3ryk_A DTDP-4-dehydrorhamnose 31.6 1.2E+02 0.0041 20.5 5.9 34 4-37 123-158 (205)
173 2v79_A DNA replication protein 31.1 40 0.0014 21.0 2.8 23 56-78 49-71 (135)
174 1wid_A DNA-binding protein RAV 30.7 14 0.00046 23.0 0.5 13 6-18 90-102 (130)
175 1njh_A Protein YOJF; structura 29.7 40 0.0014 21.4 2.6 37 4-42 68-104 (119)
176 1a9x_A Carbamoyl phosphate syn 29.4 40 0.0014 27.7 3.2 24 58-81 496-519 (1073)
177 1jko_C HIN recombinase, DNA-in 28.7 54 0.0018 15.5 2.7 21 59-79 22-42 (52)
178 1pcq_O Groes protein; chaperon 28.7 63 0.0022 19.4 3.3 29 6-34 57-85 (97)
179 1tq5_A Protein YHHW; bicupin, 28.7 1E+02 0.0035 21.0 4.8 32 6-37 83-117 (242)
180 2o8x_A Probable RNA polymerase 28.2 66 0.0023 16.5 3.1 21 59-79 32-52 (70)
181 2xi8_A Putative transcription 28.0 63 0.0021 16.1 3.3 23 58-80 14-36 (66)
182 2k9q_A Uncharacterized protein 27.9 73 0.0025 16.8 3.3 22 59-80 16-37 (77)
183 1r69_A Repressor protein CI; g 27.8 65 0.0022 16.2 3.3 23 58-80 14-36 (69)
184 1zug_A Phage 434 CRO protein; 27.7 67 0.0023 16.3 3.3 23 58-80 16-38 (71)
185 2jt1_A PEFI protein; solution 27.6 37 0.0013 19.3 2.1 19 59-77 25-43 (77)
186 1u9l_A Transcription elongatio 27.2 56 0.0019 18.3 2.7 19 62-80 6-24 (70)
187 2ab1_A Hypothetical protein; H 26.5 25 0.00087 21.8 1.3 18 9-26 21-39 (122)
188 2wfp_A Mannose-6-phosphate iso 26.5 41 0.0014 24.7 2.6 21 6-26 362-382 (394)
189 3anw_A GINS51, putative unchar 26.4 21 0.00073 23.7 0.9 13 8-20 159-171 (188)
190 1adr_A P22 C2 repressor; trans 26.2 74 0.0025 16.3 3.3 22 59-80 19-40 (76)
191 2r1j_L Repressor protein C2; p 26.1 70 0.0024 16.0 3.3 22 59-80 19-40 (68)
192 1ku3_A Sigma factor SIGA; heli 25.8 82 0.0028 16.7 3.6 22 58-79 30-51 (73)
193 1dzr_A DTDP-4-dehydrorhamnose 25.7 1.1E+02 0.0037 20.1 4.4 24 11-35 109-132 (183)
194 2fvt_A Conserved hypothetical 25.7 31 0.0011 21.8 1.6 19 8-26 30-48 (135)
195 2lm0_A AF4/FMR2 family member 25.7 33 0.0011 21.9 1.7 16 67-82 104-119 (125)
196 2fi9_A Outer membrane protein; 25.5 32 0.0011 21.4 1.6 19 8-26 32-50 (128)
197 2x48_A CAG38821; archeal virus 25.5 70 0.0024 15.8 3.4 23 58-80 31-53 (55)
198 2b5a_A C.BCLI; helix-turn-heli 25.2 79 0.0027 16.3 3.3 23 58-80 23-45 (77)
199 3omt_A Uncharacterized protein 25.2 80 0.0027 16.4 3.3 23 58-80 21-43 (73)
200 1u78_A TC3 transposase, transp 25.1 70 0.0024 18.6 3.1 23 58-80 22-44 (141)
201 1y7y_A C.AHDI; helix-turn-heli 25.1 78 0.0027 16.2 3.3 23 58-80 26-48 (74)
202 2vn2_A DNAD, chromosome replic 24.9 70 0.0024 19.3 3.1 23 56-78 49-71 (128)
203 2aj7_A Hypothetical protein BH 24.8 1.5E+02 0.0051 19.3 7.0 63 7-70 25-97 (163)
204 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 24.6 1.1E+02 0.0038 20.1 4.2 26 11-37 109-134 (185)
205 2qnk_A 3-hydroxyanthranilate 3 24.5 1.1E+02 0.0038 22.0 4.5 29 6-34 246-274 (286)
206 2yue_A Protein neuralized; str 24.5 1.1E+02 0.0036 19.9 4.1 34 9-43 107-143 (168)
207 1msc_A Bacteriophage MS2 coat 24.4 63 0.0021 20.2 2.8 28 9-36 14-45 (129)
208 1ywk_A 4-deoxy-L-threo-5-hexos 24.3 38 0.0013 24.4 2.0 18 6-23 232-249 (289)
209 2heo_A Z-DNA binding protein 1 24.0 61 0.0021 17.4 2.5 21 58-78 25-45 (67)
210 2p7v_B Sigma-70, RNA polymeras 23.8 87 0.003 16.3 3.1 22 58-79 25-46 (68)
211 2ky6_A Mediator of RNA polymer 23.6 29 0.00098 23.2 1.1 25 18-42 108-132 (166)
212 2l8k_A NSP7, non-structural pr 23.4 35 0.0012 21.7 1.5 30 5-37 74-104 (123)
213 1una_A GA unassembled coat pro 23.4 65 0.0022 20.1 2.7 28 9-36 13-44 (129)
214 3mxn_A RECQ-mediated genome in 23.4 55 0.0019 21.6 2.5 23 58-80 76-98 (157)
215 3b7h_A Prophage LP1 protein 11 23.3 88 0.003 16.2 3.2 23 58-80 20-42 (78)
216 1wlt_A 176AA long hypothetical 23.3 1.7E+02 0.0058 19.5 5.6 29 5-33 119-149 (196)
217 2a6c_A Helix-turn-helix motif; 23.1 98 0.0034 16.7 3.3 23 58-80 31-53 (83)
218 1f56_A Plantacyanin; cupredoxi 22.8 32 0.0011 20.2 1.1 23 6-35 17-39 (91)
219 1upi_A DTDP-4-dehydrorhamnose 22.8 1.5E+02 0.0051 20.3 4.7 25 11-36 128-152 (225)
220 2kpj_A SOS-response transcript 22.6 96 0.0033 17.1 3.3 23 58-80 22-44 (94)
221 1pdn_C Protein (PRD paired); p 22.6 64 0.0022 18.2 2.5 23 58-80 33-55 (128)
222 3f6w_A XRE-family like protein 22.6 97 0.0033 16.4 3.3 23 58-80 27-49 (83)
223 3bs3_A Putative DNA-binding pr 22.6 90 0.0031 16.0 3.3 23 58-80 23-45 (76)
224 2ef8_A C.ECOT38IS, putative tr 22.6 95 0.0033 16.3 3.3 23 58-80 23-45 (84)
225 3t76_A VANU, transcriptional r 22.5 98 0.0033 17.6 3.3 23 58-80 37-59 (88)
226 3ksv_A Uncharacterized protein 22.5 1.5E+02 0.005 18.4 4.4 49 29-81 31-84 (149)
227 3fyr_A Sporulation inhibitor S 21.9 99 0.0034 16.4 2.9 22 59-80 6-33 (48)
228 2cbp_A Cucumber basic protein; 21.6 34 0.0012 20.2 1.1 23 6-35 22-44 (96)
229 3qq6_A HTH-type transcriptiona 21.5 1.1E+02 0.0036 16.4 3.3 23 58-80 23-45 (78)
230 3dkq_A PKHD-type hydroxylase S 21.4 41 0.0014 23.2 1.6 21 7-27 161-181 (243)
231 4dol_A AT1G53520, 94270-95700, 21.4 70 0.0024 21.2 2.8 21 7-27 147-170 (217)
232 1wy3_A Villin; structural prot 21.4 87 0.003 15.4 2.6 20 59-78 1-20 (35)
233 2e63_A KIAA1787 protein; struc 21.3 44 0.0015 21.8 1.7 23 8-30 118-143 (170)
234 3p0t_A Uncharacterized protein 21.2 1.1E+02 0.0039 18.3 3.6 48 29-80 25-77 (138)
235 2wiu_B HTH-type transcriptiona 21.1 1.1E+02 0.0036 16.3 3.2 23 58-80 25-47 (88)
236 2hc8_A PACS, cation-transporti 21.0 33 0.0011 20.7 1.0 16 5-20 27-42 (113)
237 2jmz_A Hypothetical protein MJ 21.0 26 0.00088 22.7 0.5 16 4-19 117-132 (186)
238 2k1g_A Lipoprotein SPR; soluti 21.0 34 0.0012 21.5 1.1 25 6-30 66-92 (135)
239 1j9i_A GPNU1 DBD;, terminase s 20.9 67 0.0023 17.1 2.2 21 60-80 4-24 (68)
240 3fiq_A OBP1, RCG36470, odorant 20.9 1.5E+02 0.0053 18.1 7.6 63 3-66 69-131 (157)
241 2jpc_A SSRB; DNA binding prote 20.8 80 0.0027 15.8 2.4 21 59-79 14-34 (61)
242 2htj_A P fimbrial regulatory p 20.4 1.2E+02 0.0039 16.4 3.3 21 58-78 14-34 (81)
243 1t6s_A Conserved hypothetical 20.2 71 0.0024 20.8 2.5 29 50-78 14-44 (162)
244 1jer_A Cucumber stellacyanin; 20.1 39 0.0013 21.4 1.2 23 6-35 30-52 (138)
245 1rr7_A Middle operon regulator 20.1 1E+02 0.0036 19.0 3.2 22 59-80 93-114 (129)
No 1
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=99.83 E-value=1.3e-20 Score=128.99 Aligned_cols=82 Identities=41% Similarity=0.681 Sum_probs=78.3
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHHHhCCCHHHHHHHHh
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+++++.+|++||+++||+|+.|+++|.|++++++++++++++||.+.++.++|+++|++++++|+++|++++++|++||+
T Consensus 116 ~~~~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~p~~~~~~~~~~~~~~~~~~~vl~~af~~~~~~v~~l~~ 195 (201)
T 1fi2_A 116 NKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQNPGIVFVPLTLFGSDPPIPTPVLTKALRVEAGVVELLKS 195 (201)
T ss_dssp TCEEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSCCCCEEHHHHHHHCSSCCCHHHHHHHHTSCHHHHHHHHH
T ss_pred CeEEEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCCCeEehhhHHhcCCCCCCHHHHHHHHCcCHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cC
Q 039148 81 TF 82 (82)
Q Consensus 81 ~f 82 (82)
+|
T Consensus 196 ~~ 197 (201)
T 1fi2_A 196 KF 197 (201)
T ss_dssp HS
T ss_pred hh
Confidence 75
No 2
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.80 E-value=1.9e-19 Score=137.70 Aligned_cols=74 Identities=27% Similarity=0.502 Sum_probs=64.9
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC--------Ccceee--------------------------cc
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN--------LGVVTI--------------------------AN 50 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n--------pg~~~~--------------------------~~ 50 (82)
.++|++|||++||+|++||+||+|++++++++++|+.| +....+ +.
T Consensus 128 ~~~l~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (459)
T 2e9q_A 128 IRPFREGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRNVANQIDPYLRKFYLAGRPEQVERGVEEWERSSRKGSSGEKSG 207 (459)
T ss_dssp CEEEETTEEEEECTTCCEEEEECSSSCEEEEEEEESSSTTCCSCSSCCEEESSSCCCCCSSTTCC------------CCC
T ss_pred eEEecCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCCcccccCcccceeeccCCccccchhhhcccccccccccccccc
Confidence 46899999999999999999999999999999999766 222222 34
Q ss_pred ccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 51 TAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 51 ~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
++|++ |++++|++||++|.++|+||+++
T Consensus 208 nif~g---f~~evLa~aF~v~~~~v~kL~~~ 235 (459)
T 2e9q_A 208 NIFSG---FADEFLEEAFQIDGGLVRKLKGE 235 (459)
T ss_dssp CTTTT---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred chhhc---CCHHHHHhhcCCCHHHHHhhhhc
Confidence 89997 99999999999999999999975
No 3
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.79 E-value=2.4e-19 Score=137.54 Aligned_cols=74 Identities=23% Similarity=0.394 Sum_probs=64.8
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCc--------ceee----------------------------
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLG--------VVTI---------------------------- 48 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg--------~~~~---------------------------- 48 (82)
.++|++|||++||+|++||+||+|++++++++++|+.|+. .+.+
T Consensus 114 ~~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (476)
T 1fxz_A 114 IYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQE 193 (476)
T ss_dssp EEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTHHHHC---------------
T ss_pred EEEEeCCCEEEECCCCcEEEEeCCCCCEEEEEEecCCCcccccCCccceeeccCCccccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999966542 2222
Q ss_pred ----ccccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 49 ----ANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 49 ----~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
+.++|++ |++++||+||++|.++++||+++
T Consensus 194 ~~~~~~~if~g---f~~~vLa~af~v~~~~~~kl~~~ 227 (476)
T 1fxz_A 194 EENEGGSILSG---FTLEFLEHAFSVDKQIAKNLQGE 227 (476)
T ss_dssp ----CCCGGGG---SCHHHHHHHHTCCHHHHHHHSCC
T ss_pred cccccchhhhc---CCHHHHHhhhCCCHHHHHhhhcc
Confidence 3579997 99999999999999999999965
No 4
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.79 E-value=3.8e-19 Score=137.26 Aligned_cols=72 Identities=25% Similarity=0.399 Sum_probs=63.9
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcce--------eec------------------------ccc
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVV--------TIA------------------------NTA 52 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~--------~~~------------------------~~~ 52 (82)
.++|++|||||||+|++||+||+|++|++++++||+.|+..| .++ .|+
T Consensus 111 ~~~l~~GDV~viPaG~~h~~~N~G~~~lv~v~~~d~~n~~NQld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~ni 190 (496)
T 3ksc_A 111 VNRFREGDIIAVPTGIVFWMYNDQDTPVIAVSLTDIRSSNNQLDQMPRRFYLAGNHEQEFLQYQHQQGGKQEQENEGNNI 190 (496)
T ss_dssp EEEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTCTTCCSCSSCCEEESSSSCCCTTGGGCC-----------CCSG
T ss_pred eeccCCCCEEEECCCCcEEEEcCCCCCEEEEEEeccCcccccCCCceeeeEecCCCccccccccccccccccccccCCCc
Confidence 359999999999999999999999999999999998775432 111 589
Q ss_pred ccCCCCCcHHHHHHHhCCCHHHHHHHH
Q 039148 53 FGSNPAIVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 53 F~~~p~~~~~vLa~af~~d~~~i~kl~ 79 (82)
|++ |+.++|++||+++.++++||+
T Consensus 191 ~sg---F~~e~La~Af~v~~e~~~kl~ 214 (496)
T 3ksc_A 191 FSG---FKRDFLEDAFNVNRHIVDRLQ 214 (496)
T ss_dssp GGG---SCHHHHHHHHTCCHHHHHHHT
T ss_pred hhh---cCHHHHHHHHCCCHHHHHHHH
Confidence 997 999999999999999999998
No 5
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.79 E-value=4.3e-19 Score=136.11 Aligned_cols=74 Identities=28% Similarity=0.493 Sum_probs=65.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCc---------ceeec------------------------cc
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLG---------VVTIA------------------------NT 51 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg---------~~~~~------------------------~~ 51 (82)
.++|++|||+++|+|++||+||+|++|+++++++|+.|+. ...++ .+
T Consensus 131 ~~~~~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~~nqld~~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~n 210 (465)
T 3qac_A 131 IRHLREGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANHANQLDKNFPTRFYLAGKPQQEHSGEHQFSRESRRGERNTGN 210 (465)
T ss_dssp EEEEETTEEEEECTTCEEEEECCSSSCEEEEEEECTTSTTCCSCSSSCCEEESSSCCCCSCC--------------CCCC
T ss_pred eeeecCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCcccccccccceeEEecCCCccccccccccccccccccccccc
Confidence 5789999999999999999999999999999999987643 23333 47
Q ss_pred cccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 52 AFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 52 ~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
+|++ |++++|++||+++.++++||+++
T Consensus 211 i~sg---F~~e~La~Af~v~~~~~~kl~~~ 237 (465)
T 3qac_A 211 IFRG---FETRLLAESFGVSEEIAQKLQAE 237 (465)
T ss_dssp GGGG---SCHHHHHHHHTCCHHHHHHHHTT
T ss_pred hhhc---CCHHHHHHHhCCCHHHHHHhhhc
Confidence 9997 99999999999999999999864
No 6
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.78 E-value=8.6e-19 Score=134.48 Aligned_cols=77 Identities=12% Similarity=0.187 Sum_probs=72.8
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
|++|.++|++|||+|||+|++||+ |.|++++.+++.++++||+.+.++ .++|+. +|++||+++|++|.+++++|
T Consensus 365 ~~~f~~~l~~GDV~v~P~G~~H~~-~ag~e~~~~l~~f~s~np~~~~LaG~~s~~~~---lP~eVla~aF~v~~~~v~~L 440 (466)
T 3kgl_A 365 DRVFDGQVSQGQLLSIPQGFSVVK-RATSEQFRWIEFKTNANAQINTLAGRTSVLRG---LPLEVISNGYQISLEEARRV 440 (466)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEE-EECSSEEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEeEecCCcEEEECCCCeEEE-EcCCCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHhCcCHHHHHHH
Confidence 579999999999999999999999 899999999999999999999998 589997 99999999999999999999
Q ss_pred Hhc
Q 039148 79 QNT 81 (82)
Q Consensus 79 ~~~ 81 (82)
+++
T Consensus 441 k~~ 443 (466)
T 3kgl_A 441 KFN 443 (466)
T ss_dssp HHS
T ss_pred Hhc
Confidence 874
No 7
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.77 E-value=1.7e-18 Score=131.10 Aligned_cols=76 Identities=14% Similarity=0.178 Sum_probs=63.1
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcce-EEEE-eeecCCCcceee--------ccccccCCCCCcHHHHHHHhCC
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNV-VAIV-AFSSQNLGVVTI--------ANTAFGSNPAIVTDMLAKAFQA 70 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~a-v~i~-~~~s~npg~~~~--------~~~~F~~~p~~~~~vLa~af~~ 70 (82)
|+.++++|++|||++||+|++||+||.|..++ ++++ ++++++||.... ..++|++ ||+++|++||++
T Consensus 83 ~~~~~~~l~~GDv~~~P~G~~h~~~N~g~~~~l~i~~l~~~s~~pg~~~~f~laG~~~~~s~~~g---f~~evLa~af~v 159 (418)
T 3s7i_A 83 NNRKSFNLDEGHALRIPSGFISYILNRHDNQNLRVAKISMPVNTPGQFEDFFPASSRDQSSYLQG---FSRNTLEAAFNA 159 (418)
T ss_dssp SCEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEECSSCCSSCCCGGGG---SCHHHHHHHHTS
T ss_pred CCEEEEEecCCCEEEECCCCeEEEEecCCCccEEEEEeecCcCCCCccceeeccCCcchhHHhhc---CCHHHHHHHHCc
Confidence 45789999999999999999999999886554 4444 356778987543 2368986 999999999999
Q ss_pred CHHHHHHHH
Q 039148 71 EKKIVKQLQ 79 (82)
Q Consensus 71 d~~~i~kl~ 79 (82)
|.++++||+
T Consensus 160 ~~~~v~kl~ 168 (418)
T 3s7i_A 160 EFNEIRRVL 168 (418)
T ss_dssp CHHHHHHHT
T ss_pred CHHHHHhhh
Confidence 999999998
No 8
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.75 E-value=2.8e-18 Score=132.08 Aligned_cols=72 Identities=24% Similarity=0.438 Sum_probs=62.9
Q ss_pred eecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCc--------ceee------------------------------
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLG--------VVTI------------------------------ 48 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg--------~~~~------------------------------ 48 (82)
+|++|||++||+|++||+||+|++++++++++|..|+. .+.+
T Consensus 116 ~l~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n~~nqld~~~~~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (493)
T 2d5f_A 116 HFNEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSHGGRKQGQHQ 195 (493)
T ss_dssp EEETTEEEEECTTCCEEEEECSSSCEEEEEEECTTCTTCCSCSSCCCEESSSCCCCSCGGGTC-----------------
T ss_pred EecCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcCcccccccccceeeccCCccccchhhhhhcccccccccccccccc
Confidence 89999999999999999999999999999999955432 2222
Q ss_pred -----ccccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 49 -----ANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 49 -----~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
+.++|++ |++++||+||++|.++++||+++
T Consensus 196 ~~~~~~~nif~g---f~~e~La~aF~v~~~~v~kl~~~ 230 (493)
T 2d5f_A 196 QQEEEGGSVLSG---FSKHFLAQSFNTNEDTAEKLRSP 230 (493)
T ss_dssp ----CCCCGGGG---SCHHHHHHHTTCCHHHHHHTTCT
T ss_pred cccccccchhhc---CCHHHHHhHhCCCHHHHHHhhhc
Confidence 3479987 99999999999999999999965
No 9
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=99.74 E-value=4.3e-18 Score=130.16 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=73.0
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
|++|.++|++|||+|||+|+.||+.| |++++.+++.+++++|+.+.++ .++|+. +|++||+++|++|.+++++|
T Consensus 364 ~~~~~~~l~~GDv~v~P~G~~H~~~n-g~~~~~~l~~~~s~~~~~~~laG~~s~~~~---~p~~Vla~af~v~~~~v~~l 439 (459)
T 2e9q_A 364 QSVFDGEVREGQVLMIPQNFVVIKRA-SDRGFEWIAFKTNDNAITNLLAGRVSQMRM---LPLGVLSNMYRISREEAQRL 439 (459)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSSSCCEEESSSSSSHHHH---SCHHHHHHHHTCCHHHHHHH
T ss_pred CEEEeeEEeCCcEEEECCCCEEEEEe-CCCCeEEEEEecCCCCcceeecchhHHHHh---CCHHHHHHHHCcCHHHHHHH
Confidence 57899999999999999999999999 8899999999999999999998 789997 99999999999999999999
Q ss_pred Hhc
Q 039148 79 QNT 81 (82)
Q Consensus 79 ~~~ 81 (82)
++.
T Consensus 440 ~~~ 442 (459)
T 2e9q_A 440 KYG 442 (459)
T ss_dssp HHS
T ss_pred Hhc
Confidence 974
No 10
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=99.73 E-value=1.3e-17 Score=128.71 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=70.7
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
|++|.++|++|||+|||+|++||+.|. ++++.+++.+++++|+.+.++ .++|+. +|++||+++|++|.+++++|
T Consensus 400 ~~~f~~~l~~GDV~v~P~G~~H~~~a~-~e~~~~l~f~~s~np~~~~LaG~~sv~~~---~p~eVLa~aF~v~~~~v~~L 475 (496)
T 3ksc_A 400 NTVFDGELEAGRALTVPQNYAVAAKSL-SDRFSYVAFKTNDRAGIARLAGTSSVINN---LPLDVVAATFNLQRNEARQL 475 (496)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEEC-SSEEEEEEEESSTTCCEEESSSTTCTTTT---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCEEEEEeC-CCCEEEEEEECCCCCccccccchhhhhhh---CCHHHHHHHHCcCHHHHHHH
Confidence 579999999999999999999999875 788999999999999999887 679986 99999999999999999999
Q ss_pred Hh
Q 039148 79 QN 80 (82)
Q Consensus 79 ~~ 80 (82)
++
T Consensus 476 k~ 477 (496)
T 3ksc_A 476 KS 477 (496)
T ss_dssp HH
T ss_pred Hh
Confidence 86
No 11
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.73 E-value=9.3e-18 Score=129.85 Aligned_cols=73 Identities=23% Similarity=0.399 Sum_probs=63.6
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcce--------ee-----------------------------
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVV--------TI----------------------------- 48 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~--------~~----------------------------- 48 (82)
++|++|||++||+|++||+||+|++|+++|+++|..|+..| .+
T Consensus 128 ~~v~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n~~nqld~~~r~F~LaG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (510)
T 3c3v_A 128 HRFNEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNNNDNQLDQFPRRFNLAGNHEQEFLRYQQQSRQSRRRSLPYSPYS 207 (510)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSSCEEEEEEECTTBTTCCSCSCCCCEESSCCCCCTTGGGCC----------------
T ss_pred EEecCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCCcccccccccceeEecCCcccccchhhhcccccccccccccccc
Confidence 68999999999999999999999999999999998764322 22
Q ss_pred -------------------------------ccccccCCCCCcHHHHHHHhCCC-HHHHHHHHhc
Q 039148 49 -------------------------------ANTAFGSNPAIVTDMLAKAFQAE-KKIVKQLQNT 81 (82)
Q Consensus 49 -------------------------------~~~~F~~~p~~~~~vLa~af~~d-~~~i~kl~~~ 81 (82)
..++|++ |++++|++||+++ .++++||+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ni~sg---F~~~~La~af~v~~~~~~~~l~~~ 269 (510)
T 3c3v_A 208 PQSQPRQEEREFSPRGQHSRRERAGQEEEHEGGNIFSG---FTPEFLAQAFQVDDRQIVQNLRGE 269 (510)
T ss_dssp --------------------------------CCTGGG---SCHHHHHHHHTCCCHHHHHHHTTT
T ss_pred ccccccccccccccccccccccccccccccccccceec---CCHHHHHHHhCCCHHHHHHHhhcc
Confidence 2379997 9999999999999 9999999853
No 12
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.73 E-value=1.7e-17 Score=125.90 Aligned_cols=75 Identities=15% Similarity=0.172 Sum_probs=65.7
Q ss_pred eeEEEeecCCcEEEEccCceeEEEecC-CcceEEEEeee-cCCCcce---eecc-----ccccCCCCCcHHHHHHHhCCC
Q 039148 2 RLIIMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFS-SQNLGVV---TIAN-----TAFGSNPAIVTDMLAKAFQAE 71 (82)
Q Consensus 2 ~~~~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~-s~npg~~---~~~~-----~~F~~~p~~~~~vLa~af~~d 71 (82)
+.++++|++||+++||+|++||++|.| ++++++++.++ +++||.. .++. ++|++ ||++||+++|++|
T Consensus 101 ~~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l~~~~~s~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~ 177 (434)
T 2ea7_A 101 SRDSYILEQGHAQKIPAGTTFFLVNPDDNENLRIIKLAIPVNNPHRFQDFFLSSTEAQQSYLRG---FSKNILEASFDSD 177 (434)
T ss_dssp CEEEEEEETTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEECSCCSSCCCGGGG---SCHHHHHHHHTSC
T ss_pred CCEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEEEEecCCCCCCceeeeeecCCcchhhhhhc---CCHHHHHHHhCCC
Confidence 467899999999999999999999998 89999999987 6788743 2333 47776 9999999999999
Q ss_pred HHHHHHHH
Q 039148 72 KKIVKQLQ 79 (82)
Q Consensus 72 ~~~i~kl~ 79 (82)
.+++++|+
T Consensus 178 ~~~v~~l~ 185 (434)
T 2ea7_A 178 FKEINRVL 185 (434)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99999999
No 13
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=99.72 E-value=2.6e-17 Score=111.22 Aligned_cols=74 Identities=14% Similarity=0.134 Sum_probs=63.5
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCc-ceEEEEeee-cCCCcceee--------ccccccCCCCCcHHHHHHHhCCCHH
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYG-NVVAIVAFS-SQNLGVVTI--------ANTAFGSNPAIVTDMLAKAFQAEKK 73 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~-~av~i~~~~-s~npg~~~~--------~~~~F~~~p~~~~~vLa~af~~d~~ 73 (82)
...+|++||+++||+|+.||++|.|++ ++++++.++ +++||.+.. +.++|++ +|+++|+++|++|++
T Consensus 83 ~~~~l~~GDv~~~P~g~~H~~~N~g~~~~l~~l~v~~~~~~~g~~~~~~l~g~~~~~~~~~~---~p~~vla~af~v~~~ 159 (178)
T 1dgw_A 83 DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYDSPYD 159 (178)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSSCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHTSCHH
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCCCCCEEEEEEECCCCCCCceEEeeccCCcCcchhhhh---CCHHHHHHHHCcCHH
Confidence 357899999999999999999999986 777777754 678985543 2579987 999999999999999
Q ss_pred HHHHHHh
Q 039148 74 IVKQLQN 80 (82)
Q Consensus 74 ~i~kl~~ 80 (82)
+++||+.
T Consensus 160 ~~~~l~~ 166 (178)
T 1dgw_A 160 EIEQTLL 166 (178)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 9999994
No 14
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=99.72 E-value=1.1e-17 Score=128.31 Aligned_cols=77 Identities=16% Similarity=0.130 Sum_probs=71.8
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
|++|.++|++|||+|||+|++||+. .|++++.+++.++|++|+.+.++ .++|+. +|++||+++|++|.+++++|
T Consensus 365 ~~~f~~~l~~GDVfvvP~g~~h~~~-ag~e~~~~l~f~~s~np~~~~LaG~~sv~~~---ip~eVla~aF~v~~e~v~~L 440 (465)
T 3qac_A 365 QSVFDEELSRGQLVVVPQNFAIVKQ-AFEDGFEWVSFKTSENAMFQSLAGRTSAIRS---LPIDVVSNIYQISREEAFGL 440 (465)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEEEEEEEEEESSTTCCEEESSSSSBHHHH---SCHHHHHHHHTCCHHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCcEEEEE-cCCCCeEEEEEecCCCCcccccccchhhhhh---CCHHHHHHHhCCCHHHHHHH
Confidence 5799999999999999999999996 68899999999999999999997 689986 99999999999999999999
Q ss_pred Hhc
Q 039148 79 QNT 81 (82)
Q Consensus 79 ~~~ 81 (82)
+++
T Consensus 441 k~~ 443 (465)
T 3qac_A 441 KFN 443 (465)
T ss_dssp HHS
T ss_pred Hhc
Confidence 864
No 15
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.71 E-value=5.9e-17 Score=122.21 Aligned_cols=75 Identities=15% Similarity=0.136 Sum_probs=65.5
Q ss_pred eeEEEeecCCcEEEEccCceeEEEecC-CcceEEEEeee-cCCCcce---eecc-----ccccCCCCCcHHHHHHHhCCC
Q 039148 2 RLIIMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFS-SQNLGVV---TIAN-----TAFGSNPAIVTDMLAKAFQAE 71 (82)
Q Consensus 2 ~~~~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~-s~npg~~---~~~~-----~~F~~~p~~~~~vLa~af~~d 71 (82)
+.++++|++||+++||+|+.||++|.| ++++++++.++ +++||.. .++. ++|++ +|++||+++|++|
T Consensus 89 ~~~~~~l~~GDv~~iP~G~~H~~~N~gg~e~l~~l~~~~~~~~pg~~~~f~l~g~~~~~~~~~~---~~~~vLa~af~v~ 165 (416)
T 1uij_A 89 DRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQG---FSHNILETSFHSE 165 (416)
T ss_dssp CEEEEEECTTEEEEECTTCEEEEEECCSSCCEEEEEEEEESSBTTBCCEEESSCBSSCCCGGGG---SCHHHHHHHHTSC
T ss_pred CCeEEEecCCCEEEECCCCeEEEEecCCCCCEEEEEEeccCCCCCcceeeeecCCcccchhhhc---CCHHHHHHHhCcC
Confidence 457889999999999999999999995 99999999998 5788753 2332 47776 9999999999999
Q ss_pred HHHHHHHH
Q 039148 72 KKIVKQLQ 79 (82)
Q Consensus 72 ~~~i~kl~ 79 (82)
.+++++|+
T Consensus 166 ~~~v~~l~ 173 (416)
T 1uij_A 166 FEEINRVL 173 (416)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 99999999
No 16
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.71 E-value=3.1e-17 Score=127.47 Aligned_cols=72 Identities=24% Similarity=0.365 Sum_probs=62.4
Q ss_pred eecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcc--------ee-------------------------------
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGV--------VT------------------------------- 47 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~--------~~------------------------------- 47 (82)
.+++|||+++|+|++||+||+|++|+++++++|..|... +.
T Consensus 175 ~vr~GDviaiPaG~~~w~yN~G~~~l~iv~~~Dt~n~~NQld~~~r~F~LAGn~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (531)
T 3fz3_A 175 RIREGDVVAIPAGVAYWSYNDGDQELVAVNLFHVSSDHNQLDQNPRKFYLAGNPENEFNQQGQSQPRQQGEQGRPGQHQQ 254 (531)
T ss_dssp EEETTEEEEECTTCCEEEECCSSSCEEEEEEEETTCTTCCSCSSCCEEESSSCCCCTTCC--------------------
T ss_pred cccCCcEEEECCCCeEEEEeCCCceEEEEEEEccccccccCCCccceeEEcCCCcccccccccccccccccccccccccc
Confidence 689999999999999999999999999999999755321 11
Q ss_pred ------------eccccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 48 ------------IANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 48 ------------~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
...|+|++ |++++|++||++|.++++||+++
T Consensus 255 ~~~~~~~~~~~~~~~nifsG---Fs~e~La~A~~v~~~~a~kLq~~ 297 (531)
T 3fz3_A 255 PFGRPRQQEQQGNGNNVFSG---FNTQLLAQALNVNEETARNLQGQ 297 (531)
T ss_dssp ------------CCSSGGGG---SCHHHHHHHHTSCHHHHHHHHTS
T ss_pred cccccchhhhcccCCCeeec---CCHHHHHHHHCCCHHHHHHHhcc
Confidence 12479997 99999999999999999999963
No 17
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.70 E-value=5.9e-17 Score=123.29 Aligned_cols=74 Identities=14% Similarity=0.168 Sum_probs=65.9
Q ss_pred EEEeecCCcEEEEccCceeEEEecC-CcceEEEEeee-cCCCccee---ec-----cccccCCCCCcHHHHHHHhCCCHH
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFS-SQNLGVVT---IA-----NTAFGSNPAIVTDMLAKAFQAEKK 73 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~-s~npg~~~---~~-----~~~F~~~p~~~~~vLa~af~~d~~ 73 (82)
+++.|++||+++||+|+.||++|.| +++++++++++ +++||... ++ .++|++ ||+++|+++|++|.+
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l~v~~~~~~pg~~~~F~laG~~~~~~~~~~---~~~~vLa~af~v~~~ 204 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRILKFAITFRRPGTVEDFFLSSTKRLPSYLSA---FSKNFLEASYDSPYD 204 (445)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSCCEEEEEEEECCSSTTCCCEEESSCCSSCCCGGGG---SCHHHHHHHHTSCHH
T ss_pred EEEEecCCCEEEECCCCcEEEEECCCCCCEEEEEEeccCCCCCceeeeeccCCCchhhhhhc---CCHHHHHHHhCCCHH
Confidence 6789999999999999999999999 89999999999 67787432 33 378987 999999999999999
Q ss_pred HHHHHHh
Q 039148 74 IVKQLQN 80 (82)
Q Consensus 74 ~i~kl~~ 80 (82)
+++||++
T Consensus 205 ~v~~l~~ 211 (445)
T 2cav_A 205 EIEQTLL 211 (445)
T ss_dssp HHHHHTT
T ss_pred HHHhhhc
Confidence 9999985
No 18
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=99.68 E-value=7.7e-17 Score=122.08 Aligned_cols=75 Identities=19% Similarity=0.159 Sum_probs=64.8
Q ss_pred eeEEEeecCCcEEEEccCceeEEEecCCcceEEEEee-ecCCCcceeecc---ccccCCCCCcHHHHHHHhCCCHHHHHH
Q 039148 2 RLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF-SSQNLGVVTIAN---TAFGSNPAIVTDMLAKAFQAEKKIVKQ 77 (82)
Q Consensus 2 ~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~-~s~npg~~~~~~---~~F~~~p~~~~~vLa~af~~d~~~i~k 77 (82)
++|+++|++|||||||+|++||++|.+ ++++++.. ++++|+.+.++. ++|++ ||+++|++||++|.++|++
T Consensus 330 ~~~~~~l~~GDV~vvP~G~~~~~~~~~--~l~~v~f~~~~~~~~~~~LAG~~~sv~~~---~~~evla~af~v~~~~v~~ 404 (418)
T 3s7i_A 330 RRYTARLKEGDVFIMPAAHPVAINASS--ELHLLGFGINAENNHRIFLAGDKDNVIDQ---IEKQAKDLAFPGSGEQVEK 404 (418)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEESS--CEEEEEEEESCTTCCEEESSSSTTBHHHH---SCHHHHHHHSSSCHHHHHH
T ss_pred eEEEeeeCCCCEEEECCCCEEEEECCC--CEEEEEEEcCCCCCcceEccCchhhhhhc---CCHHHHHHHhCCCHHHHHH
Confidence 689999999999999999999999975 45554432 467999999985 68886 9999999999999999999
Q ss_pred HHhc
Q 039148 78 LQNT 81 (82)
Q Consensus 78 l~~~ 81 (82)
|++.
T Consensus 405 L~~~ 408 (418)
T 3s7i_A 405 LIKN 408 (418)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9863
No 19
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=99.67 E-value=2.8e-16 Score=121.64 Aligned_cols=77 Identities=17% Similarity=0.254 Sum_probs=70.8
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
|++|.++|++|||++||+|+.|++.| |++++.+++.+.+++|+.+.++ .++|+. +|++||+++|++|.+++++|
T Consensus 414 ~~~~~~~l~~GDv~viP~G~~H~~~N-g~e~l~~l~f~~s~~p~~~~LaG~~svf~~---lp~eVla~aF~v~~e~v~~L 489 (510)
T 3c3v_A 414 NRVYDEELQEGHVLVVPQNFAVAGKS-QSDNFEYVAFKTDSRPSIANLAGENSVIDN---LPEEVVANSYGLPREQARQL 489 (510)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEE-CSSEEEEEEEESSSSCCEEESSSTTSTTTT---SCHHHHHHHHTCCHHHHHHH
T ss_pred CEEEeEEEcCCcEEEECCCCeEEEEe-CCCCEEEEEEECCCCcceeecccHhHHHHh---CCHHHHHHHHCcCHHHHHHH
Confidence 47899999999999999999999999 8887777777778999999998 789997 99999999999999999999
Q ss_pred Hhc
Q 039148 79 QNT 81 (82)
Q Consensus 79 ~~~ 81 (82)
++.
T Consensus 490 ~~~ 492 (510)
T 3c3v_A 490 KNN 492 (510)
T ss_dssp HHS
T ss_pred Hhh
Confidence 975
No 20
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=99.67 E-value=1.6e-16 Score=121.86 Aligned_cols=72 Identities=22% Similarity=0.354 Sum_probs=63.4
Q ss_pred eecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcc--------eeec------------------cccccCCCCCc
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGV--------VTIA------------------NTAFGSNPAIV 60 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~--------~~~~------------------~~~F~~~p~~~ 60 (82)
+|++||+++||+|++||+||.|++++++++.+|..|+.. ..++ .++|++ |+
T Consensus 148 ~l~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n~~nQld~~~~~F~LaG~~~~~~~~~~~~~~~~~~ni~sG---F~ 224 (466)
T 3kgl_A 148 HIRTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLASHQNQLDRNPRPFYLAGNNPQGQVWIEGREQQPQKNILNG---FT 224 (466)
T ss_dssp EEETTEEEEECTTCEEEEECCSSSCEEEEEEEESSSTTCCSCSSCCEEESSCCBTTCCTTSTTCTTCCBCCGGGG---SC
T ss_pred cccCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCCcccccCCceeeeEecCCCccccccccccccccCCCcccc---CC
Confidence 899999999999999999999999999999999876543 2222 378987 99
Q ss_pred HHHHHHHhCCCHHHHHHHHhc
Q 039148 61 TDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 61 ~~vLa~af~~d~~~i~kl~~~ 81 (82)
.++|++||+++.++++||+++
T Consensus 225 ~e~La~Af~v~~e~~~kL~~~ 245 (466)
T 3kgl_A 225 PEVLAKAFKIDVRTAQQLQNQ 245 (466)
T ss_dssp HHHHHHHHTSCHHHHHHHTCT
T ss_pred HHHHHHHhCCCHHHHHHHhcc
Confidence 999999999999999999853
No 21
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=99.67 E-value=3.6e-16 Score=119.94 Aligned_cols=77 Identities=16% Similarity=0.235 Sum_probs=70.9
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
|++|.++|++|||++||+|+.|++.| |++++.+++.+.+++|+.+.++ .++|+. +|++||+++|++|.+++++|
T Consensus 380 ~~~~~~~l~~GDv~viP~G~~H~~~n-g~~~l~~l~f~~s~~p~~~~laG~~s~~~~---~p~~Vla~af~~~~~~v~~l 455 (476)
T 1fxz_A 380 ERVFDGELQEGRVLIVPQNFVVAARS-QSDNFEYVSFKTNDTPMIGTLAGANSLLNA---LPEEVIQHTFNLKSQQARQI 455 (476)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEE-CSTTEEEEEEESSSSCCEEESSSTTCTGGG---SCHHHHHHHHTCCHHHHHHH
T ss_pred CEEeeeEEcCCCEEEECCCCeEEEEe-CCCCEEEEEEECCCCCceeEccchhHHHHh---CCHHHHHHHhCcCHHHHHHH
Confidence 46889999999999999999999999 8888888887779999999998 789997 99999999999999999999
Q ss_pred Hhc
Q 039148 79 QNT 81 (82)
Q Consensus 79 ~~~ 81 (82)
++.
T Consensus 456 ~~~ 458 (476)
T 1fxz_A 456 KNN 458 (476)
T ss_dssp HHS
T ss_pred Hhh
Confidence 975
No 22
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=99.66 E-value=4e-16 Score=118.73 Aligned_cols=73 Identities=14% Similarity=0.108 Sum_probs=64.3
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEee-ecCCCcceeec---cccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF-SSQNLGVVTIA---NTAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~-~s~npg~~~~~---~~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
+|+++|++|||+|||+|++||++|. +++.+++.. ++++|+.+.++ .++|++ +|+++|+++|++|.+++++|
T Consensus 335 ~~~~~l~~GdV~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~af~v~~~~v~~l 409 (445)
T 2cav_A 335 RYAATLSEGDIIVIPSSFPVALKAA--SDLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEEL 409 (445)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEESCTTCCEEESSSSTTBSGGG---SCHHHHHHHSSSCHHHHHHH
T ss_pred EEEeEecCCcEEEEcCCcEEEEEcC--CCeEEEEEEccCCCCCcEEcccchhhhhhh---CCHHHHHHHHCcCHHHHHHH
Confidence 8999999999999999999999999 355444433 56799999998 689997 99999999999999999999
Q ss_pred Hh
Q 039148 79 QN 80 (82)
Q Consensus 79 ~~ 80 (82)
++
T Consensus 410 ~~ 411 (445)
T 2cav_A 410 LE 411 (445)
T ss_dssp HH
T ss_pred Hh
Confidence 86
No 23
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.66 E-value=3.4e-16 Score=117.89 Aligned_cols=73 Identities=10% Similarity=0.094 Sum_probs=62.7
Q ss_pred EEEeecCCcE------EEEccCceeEEEecC-CcceEEEEeeecCC-C--cceeec-----cccccCCCCCcHHHHHHHh
Q 039148 4 IIMVLKKGDV------FVFLVGLVHFKCNVG-YGNVVAIVAFSSQN-L--GVVTIA-----NTAFGSNPAIVTDMLAKAF 68 (82)
Q Consensus 4 ~~~~l~~GDv------~vfP~G~~H~~~N~G-~~~av~i~~~~s~n-p--g~~~~~-----~~~F~~~p~~~~~vLa~af 68 (82)
.++.|++||+ ++||+|++||++|.| +++++++++++++| | ....++ .++|++ ||++||+++|
T Consensus 94 ~~~~l~~GDv~~~~~~~~iP~G~~h~~~N~g~~~~l~~i~~~~~~~~~~~~~f~L~G~~~~~s~~~~---~~~~vLa~af 170 (397)
T 2phl_A 94 REYFFLTSDNPIFSDHQKIPAGTIFYLVNPDPKEDLRIIQLAMPVNNPQIHEFFLSSTEAQQSYLQE---FSKHILEASF 170 (397)
T ss_dssp EEEEEEESSCTTSCSEEEECTTCEEEEEECCSSCCEEEEEEEEESSSSSCCEEECCCBTTBCCGGGG---SCHHHHHHHH
T ss_pred EEEEECCCCcccccceEEECCCCcEEEEeCCCCCCeEEEEeecCCCCccceeeeccCCCchhHHhhc---CCHHHHHHHh
Confidence 5789999999 999999999999999 89999999999765 4 122232 257776 9999999999
Q ss_pred CCCHHHHHHHH
Q 039148 69 QAEKKIVKQLQ 79 (82)
Q Consensus 69 ~~d~~~i~kl~ 79 (82)
++|.+++++|+
T Consensus 171 ~v~~~~v~~l~ 181 (397)
T 2phl_A 171 NSKFEEINRVL 181 (397)
T ss_dssp TSCHHHHHHHH
T ss_pred CCCHHHHHhhh
Confidence 99999999999
No 24
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=99.65 E-value=5.4e-16 Score=116.99 Aligned_cols=75 Identities=17% Similarity=0.122 Sum_probs=68.1
Q ss_pred eeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeec-CCCcceeec---cccccCCCCCcHHHHHHHhCCCHHHHHH
Q 039148 2 RLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS-QNLGVVTIA---NTAFGSNPAIVTDMLAKAFQAEKKIVKQ 77 (82)
Q Consensus 2 ~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s-~npg~~~~~---~~~F~~~p~~~~~vLa~af~~d~~~i~k 77 (82)
|+|.++|++|||+|||+|+.||++|. +++.+++.+++ ++|+.+.++ .++|+. +|+++|+++|++|.+++++
T Consensus 305 ~~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~l~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~af~~~~~~v~~ 379 (416)
T 1uij_A 305 QRYRAELSEDDVFVIPAAYPFVVNAT--SNLNFLAFGINAENNQRNFLAGEKDNVVRQ---IERQVQELAFPGSAQDVER 379 (416)
T ss_dssp EEEEEEEETTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBSGGG---SCHHHHHHHSSSCHHHHHH
T ss_pred EEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEEcCCCCCcceecccchhhHHHh---CCHHHHHHHHCcCHHHHHH
Confidence 58999999999999999999999999 57888888864 599999997 689997 9999999999999999999
Q ss_pred HHhc
Q 039148 78 LQNT 81 (82)
Q Consensus 78 l~~~ 81 (82)
|++.
T Consensus 380 l~~~ 383 (416)
T 1uij_A 380 LLKK 383 (416)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9863
No 25
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=99.64 E-value=4.2e-16 Score=117.40 Aligned_cols=79 Identities=23% Similarity=0.121 Sum_probs=67.1
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEee-ecCCCcceeec---cccccCCC-CCc-HHHHHHHhCCCHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF-SSQNLGVVTIA---NTAFGSNP-AIV-TDMLAKAFQAEKKI 74 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~-~s~npg~~~~~---~~~F~~~p-~~~-~~vLa~af~~d~~~ 74 (82)
|++|+++|++|||+|||+|+.||++|.+ ++.+++.. ++++|+.+.++ .++|++.| +++ ++||+++|++|+++
T Consensus 287 ~~~~~~~l~~GDV~vvP~G~~h~~~n~~--~l~~l~f~~~s~~~~~~~laG~~~sv~~~~p~~~~~~eVla~af~v~~~~ 364 (397)
T 2phl_A 287 YESYRAELSKDDVFVIPAAYPVAIKATS--NVNFTGFGINANNNNRNLLAGKTDNVISSIGRALDGKDVLGLTFSGSGDE 364 (397)
T ss_dssp EEEEEEEEETTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSSSBHHHHHHTSTTHHHHHHHHSSSCHHH
T ss_pred ceEEEEEecCCCEEEECCCCeEEEEeCC--CeEEEEEECCCCCCcceecccchhhHHhhCCCccchHHHHHHHhCcCHHH
Confidence 4799999999999999999999999997 56666544 45699999888 78999733 333 99999999999999
Q ss_pred HHHHHhc
Q 039148 75 VKQLQNT 81 (82)
Q Consensus 75 i~kl~~~ 81 (82)
+++|++.
T Consensus 365 v~~l~~~ 371 (397)
T 2phl_A 365 VMKLINK 371 (397)
T ss_dssp HHHHHTT
T ss_pred HHHHHhc
Confidence 9999874
No 26
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=99.63 E-value=3.4e-16 Score=120.53 Aligned_cols=76 Identities=20% Similarity=0.270 Sum_probs=70.6
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHHHhCCCHHHHHHHHh
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
|++|.++|++||+++||+|+.|++.| +++++.+++.+++++|+.+.+ .++|++ +|++||+++|++|.+++++|++
T Consensus 409 ~~~~~~~l~~GDv~vvP~G~~H~~~n-~~e~~~~l~~~ts~~p~~~~l-~s~~~~---~p~eVla~aF~v~~~~v~~l~~ 483 (493)
T 2d5f_A 409 NAVFDGELRRGQLLVVPQNFVVAEQG-GEQGLEYVVFKTHHNAVSSYI-KDVFRA---IPSEVLSNSYNLGQSQVRQLKY 483 (493)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEEE-EEEEEEEEEEESSTTCCEEEH-HHHHHH---SCHHHHHHHHTCCHHHHHHHHH
T ss_pred CEEEeEEEcCCCEEEECCCCeEeeee-CCCCEEEEEEECCCCCcceeH-HHHHHh---CCHHHHHHHHCcCHHHHHHHHh
Confidence 46888999999999999999999998 458899999999999999999 789997 9999999999999999999987
Q ss_pred c
Q 039148 81 T 81 (82)
Q Consensus 81 ~ 81 (82)
.
T Consensus 484 ~ 484 (493)
T 2d5f_A 484 Q 484 (493)
T ss_dssp S
T ss_pred c
Confidence 5
No 27
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=99.63 E-value=1.8e-15 Score=114.72 Aligned_cols=74 Identities=22% Similarity=0.169 Sum_probs=66.1
Q ss_pred eeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeee-cCCCcceeec---cccccCCCCCcHHHHHHHhCCCHHHHHH
Q 039148 2 RLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS-SQNLGVVTIA---NTAFGSNPAIVTDMLAKAFQAEKKIVKQ 77 (82)
Q Consensus 2 ~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~-s~npg~~~~~---~~~F~~~p~~~~~vLa~af~~d~~~i~k 77 (82)
|+|.++|++|||+|||+|+.||++|. +++.+++.+. +++|+.+.++ .++|+. +|+++|+++|++|.+++++
T Consensus 321 r~~~~~l~~Gdv~vvP~g~~h~~~n~--~~~~~v~f~~~~~~~~~~~laG~~~sv~~~---~p~~vla~af~v~~~~v~~ 395 (434)
T 2ea7_A 321 QRYRAELSEDDVFVIPAAYPVAINAT--SNLNFFAFGINAENNRRNFLAGGKDNVMSE---IPTEVLEVSFPASGKKVEK 395 (434)
T ss_dssp EEEEEEECTTCEEEECTTCCEEEEES--SSEEEEEEEETCTTCCEEESSSSTTBGGGG---SCHHHHHHHSSSCHHHHHH
T ss_pred EEEEEEecCCcEEEECCCCeEEEEcC--CCeEEEEEECCCCCCCceecccchhhhhhh---CCHHHHHHHHCcCHHHHHH
Confidence 48999999999999999999999999 4676666554 5689999998 689997 9999999999999999999
Q ss_pred HHh
Q 039148 78 LQN 80 (82)
Q Consensus 78 l~~ 80 (82)
|++
T Consensus 396 l~~ 398 (434)
T 2ea7_A 396 LIK 398 (434)
T ss_dssp HHT
T ss_pred HHh
Confidence 986
No 28
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=99.62 E-value=6.3e-16 Score=120.18 Aligned_cols=76 Identities=18% Similarity=0.306 Sum_probs=66.2
Q ss_pred CeeEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeec-CCCcceeec--cccccCCCCCcHHHHHHHhCCCHHHHHH
Q 039148 1 NRLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS-QNLGVVTIA--NTAFGSNPAIVTDMLAKAFQAEKKIVKQ 77 (82)
Q Consensus 1 n~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s-~npg~~~~~--~~~F~~~p~~~~~vLa~af~~d~~~i~k 77 (82)
|++|+++|++|||++||+|++|++. .|++ ++.+.+|++ +||+.+.++ .++|+. +|++||+++|++|.+++++
T Consensus 436 ~~v~~~~L~~GDV~v~P~G~~H~~~-ag~e-~l~flaF~ss~np~~~~LaG~~svf~~---lP~eVLa~aF~v~~e~v~k 510 (531)
T 3fz3_A 436 DAILDQEVQQGQLFIVPQNHGVIQQ-AGNQ-GFEYFAFKTEENAFINTLAGRTSFLRA---LPDEVLANAYQISREQARQ 510 (531)
T ss_dssp CEEEEEEEETTCEEEECTTCEEEEE-EEEE-EEEEEEEESSTTCCEEESSSTTCHHHH---SCHHHHHHHHTCCHHHHHH
T ss_pred cEEEEEEecCCeEEEECCCCeEEEe-cCCC-CEEEEEEecCCCCcceeccchhHHHHh---CCHHHHHHHhCcCHHHHHH
Confidence 4789999999999999999999987 4544 555557764 999999998 789997 9999999999999999999
Q ss_pred HHhc
Q 039148 78 LQNT 81 (82)
Q Consensus 78 l~~~ 81 (82)
|+++
T Consensus 511 Lk~~ 514 (531)
T 3fz3_A 511 LKYN 514 (531)
T ss_dssp HHHS
T ss_pred HHhc
Confidence 9974
No 29
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.43 E-value=2.8e-13 Score=98.19 Aligned_cols=75 Identities=20% Similarity=0.246 Sum_probs=68.8
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
.+...|++||+++||+|..|+..|.|++++.+++.+...+++...++. .+++ +|+++|+++|+++++++++|+++
T Consensus 277 ~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~~~~~~-~~~~---~~~~vl~~~f~~~~~~~~~l~~~ 351 (361)
T 2vqa_A 277 ASVSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQSIDLST-WLAS---NPSSVLGNTFQISPELTKKLPVQ 351 (361)
T ss_dssp EEEEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCCEEHHH-HHHT---SCHHHHHHHHTCCHHHHTTSCCS
T ss_pred EEEEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcceeeHHH-Hhhh---CCHHHHHHHHCcCHHHHHhhhcc
Confidence 356789999999999999999999999999999999999999888875 6775 99999999999999999999865
No 30
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=99.16 E-value=6.2e-11 Score=85.81 Aligned_cols=72 Identities=15% Similarity=0.201 Sum_probs=62.8
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCc---ceeeccccccCCCCCcHHHHHHHhCCCHHHHHHHHh
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLG---VVTIANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg---~~~~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
...|++||+++||+|..|+.+|.|++++.++..++..++. +.. ..+.|++ +|.++|+++|+++.+.+++|++
T Consensus 97 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~-~~~~~~~---~p~~vLa~~~~v~~~~~~~l~~ 171 (361)
T 2vqa_A 97 IADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFS-VTDWLSH---TPIAWVEENLGWTAAQVAQLPK 171 (361)
T ss_dssp EEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEE-HHHHHHT---SCHHHHHHHHTCCHHHHTTSCS
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceec-HhHHHHh---CCHHHHHHHhCcCHHHHHhccc
Confidence 3579999999999999999999999999999999987765 343 3467886 9999999999999999998864
No 31
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=99.09 E-value=1.1e-09 Score=68.28 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=61.5
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEe-eecCCCcceeecc---ccccCCCCCcHHHHHHHhCCCHHHHHHH
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA-FSSQNLGVVTIAN---TAFGSNPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~-~~s~npg~~~~~~---~~F~~~p~~~~~vLa~af~~d~~~i~kl 78 (82)
-+...|++|||+|+|+|..-.+.+.. ...+|+. .|.+|+-.+.++. +++.. +|.++|+.||+++.+.+++|
T Consensus 5 ~~~~~l~~G~v~vVPq~~~v~~~A~~--~le~v~F~tna~~~~~~~LAG~~~Svl~~---l~~evla~aF~~s~ee~~~l 79 (93)
T 1dgw_Y 5 RYAATLSEGDIIVIPSSFPVALKAAS--DLNMVGIGVNAENNERNFLAGHKENVIRQ---IPRQVSDLTFPGSGEEVEEL 79 (93)
T ss_dssp EEEEEECTTCEEEECTTCCEEEEESS--SEEEEEEEESCTTCCEEESSSSTTBSTTT---SCHHHHHHHSSSCTHHHHHH
T ss_pred hhhceecCCcEEEECCCCceeEEecC--CeEEEEEEecCCCCeeeeccCCcccHHHh---CCHHHHHHHcCCCHHHHHHH
Confidence 36789999999999999999999985 3666655 3555787777764 89997 99999999999999999999
Q ss_pred Hh
Q 039148 79 QN 80 (82)
Q Consensus 79 ~~ 80 (82)
+.
T Consensus 80 ~~ 81 (93)
T 1dgw_Y 80 LE 81 (93)
T ss_dssp TT
T ss_pred Hh
Confidence 85
No 32
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=99.03 E-value=5.2e-10 Score=81.77 Aligned_cols=73 Identities=15% Similarity=0.226 Sum_probs=63.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
+..|++||+++||+|..|+..|.|++++.+++.+....+....+. ..++. ++.++|+.+|+++.+++++|+++
T Consensus 302 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d~~~~-~~l~~---~~~~v~~~~f~~~~~~~~~l~~~ 374 (385)
T 1j58_A 302 TFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYADVSLN-QWLAM---LPETFVQAHLDLGKDFTDVLSKE 374 (385)
T ss_dssp EEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCCEEHH-HHHHT---SCHHHHHHHHTCCHHHHTTCCSS
T ss_pred EEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccccCHH-HHHHh---CCHHHHHHHhCCCHHHHHhhhcc
Confidence 357999999999999999999999999999999998777665554 35564 99999999999999999998754
No 33
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=98.81 E-value=3e-09 Score=77.75 Aligned_cols=73 Identities=16% Similarity=0.252 Sum_probs=60.5
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCccee--eccccccCCCCCcHHHHHHHhCCCHHHHHHHHh
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVT--IANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~--~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+...|++||+++||+|..|+..|.+ +++.++..|+...+.... ...++|+. ++.++|+++|+++.+.+++|.+
T Consensus 122 ~~~~l~~GD~~~ip~g~~H~~~n~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~p~evla~~~~vs~~~~~~l~~ 196 (385)
T 1j58_A 122 FIDDVGEGDLWYFPSGLPHSIQALE-EGAEFLLVFDDGSFSENSTFQLTDWLAH---TPKEVIAANFGVTKEEISNLPG 196 (385)
T ss_dssp EEEEEETTEEEEECTTCCEEEEEEE-EEEEEEEEESCTTCCGGGEEEHHHHHHT---SCHHHHHHHHTCCTGGGTTSCS
T ss_pred EEEEeCCCCEEEECCCCeEEEEECC-CCEEEEEEECCCCccccchhhhhhhhhc---ccHHHHHHHhCCCHHHHHhccc
Confidence 3458999999999999999999998 468899999988775432 22467886 9999999999999988887754
No 34
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.07 E-value=1.1e-05 Score=49.79 Aligned_cols=40 Identities=28% Similarity=0.324 Sum_probs=35.5
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcc
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGV 45 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~ 45 (82)
..|++||++.+|+|..|+..|.|++++++++.+....++.
T Consensus 81 ~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p~~~~~ 120 (125)
T 3h8u_A 81 THLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAPGNAGF 120 (125)
T ss_dssp EEEETTEEEEECTTCCCEEEECSSSCEEEEEEEESTTCCC
T ss_pred EEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECCCcccc
Confidence 5789999999999999999999999999999987655544
No 35
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=97.86 E-value=4.1e-05 Score=51.52 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=35.1
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
.+...+++||++++|+|..|+..|.|++++++++.+...
T Consensus 118 ~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 118 AKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred EEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 456789999999999999999999999999998887753
No 36
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=97.81 E-value=2.1e-05 Score=48.22 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=29.8
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
..+++||++.+|+|..|+..|.|++|++++..
T Consensus 61 ~~l~aGd~~~~p~G~~H~~~N~g~~~l~fi~v 92 (98)
T 2ozi_A 61 AQLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CCBCTTCCEEECTTCEEEEEECSSSCEEEEEE
T ss_pred EEECCCCEEEECCCCceeCEECCCCCEEEEEE
Confidence 37899999999999999999999999999875
No 37
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=97.80 E-value=6.2e-05 Score=48.19 Aligned_cols=38 Identities=11% Similarity=0.045 Sum_probs=33.7
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
++..|++||++.+|+|..|...|.|++++.++..+...
T Consensus 88 ~~~~l~~Gd~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 125 (148)
T 2oa2_A 88 FQEEVFDDYAILIPAGTWHNVRNTGNRPLKLYSIYAPP 125 (148)
T ss_dssp EEEEEETTCEEEECTTCEEEEEECSSSCEEEEEEEESC
T ss_pred eeEEECCCCEEEECCCCcEEEEECCCCCEEEEEEECCC
Confidence 45789999999999999999999999999888877643
No 38
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=97.76 E-value=3.9e-05 Score=54.00 Aligned_cols=37 Identities=11% Similarity=-0.072 Sum_probs=33.6
Q ss_pred eeEEEeecCCcEEEEccCceeEEEecCCcceEE-EEee
Q 039148 2 RLIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVA-IVAF 38 (82)
Q Consensus 2 ~~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~-i~~~ 38 (82)
+++...+++||++.+|+|..|...|.|++|+.+ +..+
T Consensus 100 ~~~~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~ 137 (239)
T 2xlg_A 100 DLYSIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWM 137 (239)
T ss_dssp EEEEEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEE
T ss_pred ceeEEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEE
Confidence 567889999999999999999999999999888 6666
No 39
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=97.76 E-value=4.3e-05 Score=45.66 Aligned_cols=33 Identities=18% Similarity=0.116 Sum_probs=29.7
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
...|++||.+.+|.|..|...|.|+++++++..
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~~~~~~l~v 92 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSDTEFVFVEI 92 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSSSCEEEEEE
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCCCcEEEEEE
Confidence 357899999999999999999999999887764
No 40
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=97.74 E-value=9.6e-05 Score=46.11 Aligned_cols=41 Identities=12% Similarity=-0.037 Sum_probs=36.1
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcc
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGV 45 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~ 45 (82)
...+++||++.+|+|..|...|.+++++..+..+....|..
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~~ 120 (145)
T 3ht1_A 80 TEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCERPPV 120 (145)
T ss_dssp EEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESCCCCC
T ss_pred EEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCCCCCe
Confidence 46799999999999999999999999999998887765554
No 41
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=97.68 E-value=0.00012 Score=42.66 Aligned_cols=35 Identities=17% Similarity=0.044 Sum_probs=31.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...+++||++.+|+|..|...|.+++++..+....
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~ 102 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRNESASPALLLVVTA 102 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeC
Confidence 35789999999999999999999999998887764
No 42
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=97.67 E-value=0.00012 Score=47.29 Aligned_cols=38 Identities=21% Similarity=0.189 Sum_probs=33.6
Q ss_pred EEeecCCcEEEEccC-ceeEEEecCCcceEEEEeeecCC
Q 039148 5 IMVLKKGDVFVFLVG-LVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G-~~H~~~N~G~~~av~i~~~~s~n 42 (82)
...|++||++.||+| ..|+..|.|+++++++.......
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p~~ 125 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQRLD 125 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEECCS
T ss_pred EEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECCCC
Confidence 357899999999997 99999999999999988877554
No 43
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=97.64 E-value=0.00012 Score=43.51 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=32.2
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
...|++||++.+|+|..|...|.+++++..+..+..
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~ 98 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHP 98 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEES
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECC
Confidence 357899999999999999999999999988888664
No 44
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=97.61 E-value=8.4e-05 Score=48.08 Aligned_cols=38 Identities=16% Similarity=0.106 Sum_probs=33.8
Q ss_pred EEeecCCcEEEEccCceeEEEecC-CcceEEEEeeecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFSSQN 42 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~s~n 42 (82)
...|++||++.+|+|..|+..|.| ++++..+..+....
T Consensus 89 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~ 127 (163)
T 1lr5_A 89 EIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRPP 127 (163)
T ss_dssp EEEECTTEEEEECTTCCEEEECCCSSSCEEEEEEEESSS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCCCEEEEEEECCCC
Confidence 457999999999999999999999 99999998887643
No 45
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=97.57 E-value=0.00012 Score=49.38 Aligned_cols=38 Identities=11% Similarity=0.060 Sum_probs=34.9
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
..+|++||.+ ||+|..|...|.|++++.++.++.-..|
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P~~p 156 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIEAPA 156 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEECCC
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcCCCc
Confidence 3579999999 9999999999999999999999987776
No 46
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=97.51 E-value=8.8e-05 Score=45.17 Aligned_cols=31 Identities=23% Similarity=0.235 Sum_probs=28.7
Q ss_pred eecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
.+++||.+.+|+|..|...|.|++|+++|-.
T Consensus 62 ~l~~G~~~~ip~G~~H~~~N~g~~pl~~IeV 92 (98)
T 3lag_A 62 QLKTGRSYARKAGVQHDVRNESTAEIVFLEI 92 (98)
T ss_dssp CBCTTCCEEECTTCEEEEBCCSSSCEEEEEE
T ss_pred EecCCcEEEEcCCCcEECEECCCCeEEEEEE
Confidence 4789999999999999999999999998864
No 47
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=97.50 E-value=0.00017 Score=44.52 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=29.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCc-ceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYG-NVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~-~av~i~~~~ 39 (82)
..|++||.+.||+|..|...|.+++ ++++++++-
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~~~~~~~l~v~~ 109 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDGGEPTVWLAVHC 109 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEE
Confidence 4799999999999999999999976 666676654
No 48
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.48 E-value=0.00046 Score=44.29 Aligned_cols=55 Identities=29% Similarity=0.354 Sum_probs=40.5
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHHH
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAKA 67 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~a 67 (82)
..|++||++.+|+|..|+..|.+++++..++.....+... ...+.. +.++...++
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~~----~~wl~~---v~~e~~~~~ 143 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQVHLGP----AEWLGS---VTEEEYRKA 143 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECCGGGCC----CEECCC---CCHHHHHHH
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEccCCCCC----ceeccc---CCHHHhhhc
Confidence 4789999999999999999999999998888876543221 123333 666665554
No 49
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=97.47 E-value=0.00027 Score=46.57 Aligned_cols=38 Identities=13% Similarity=0.005 Sum_probs=34.1
Q ss_pred EEeecCCcEEEEccCceeEEEecC-CcceEEEEeeecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFSSQN 42 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~s~n 42 (82)
...|++||++.+|+|..|+..|.| ++++..++..+...
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~~ 133 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSDR 133 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESSC
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCCc
Confidence 457899999999999999999999 99999999887653
No 50
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=97.46 E-value=0.00025 Score=44.66 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=30.5
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~ 38 (82)
...|++||++.+|.|..|...|.+++++.++++.
T Consensus 97 ~~~l~~Gd~i~i~~~~~H~~~n~~~~~~~~l~v~ 130 (133)
T 1o4t_A 97 DVPIKAGDVCFTDSGESHSIENTGNTDLEFLAVI 130 (133)
T ss_dssp EEEEETTEEEEECTTCEEEEECCSSSCEEEEEEE
T ss_pred EEEeCCCcEEEECCCCcEEeEECCCCCEEEEEEE
Confidence 3578999999999999999999999999887764
No 51
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=97.45 E-value=0.00034 Score=43.06 Aligned_cols=37 Identities=8% Similarity=-0.060 Sum_probs=31.8
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
...|++||++.+|+|..|...|.+++++..++..-..
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~~~i~~~~ 103 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQISAASDSPIGFLCIQVKA 103 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEEEBTTBCEEEEEEEEET
T ss_pred EEEeCCCCEEEECCCCcEEEEcCCCCCEEEEEEEcCC
Confidence 3578999999999999999999999998887766543
No 52
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=97.41 E-value=0.00029 Score=46.44 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=30.6
Q ss_pred EEeecCCcEEEEccCceeEEEec-CCcceEEEEee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNV-GYGNVVAIVAF 38 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~-G~~~av~i~~~ 38 (82)
...|++||.+.||.|..|...|. |++++.++.++
T Consensus 163 ~~~l~~GD~~~~~~~~~H~~~n~~~~~~~~~l~v~ 197 (198)
T 2bnm_A 163 EALLPTGASMFVEEHVPHAFTAAKGTGSAKLIAVN 197 (198)
T ss_dssp EEEECTTCEEEECTTCCEEEEESTTSCCEEEEEEE
T ss_pred cEEECCCCEEEeCCCCceEEEecCCCCCeEEEEEe
Confidence 45799999999999999999999 99999888764
No 53
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=97.39 E-value=0.00033 Score=43.50 Aligned_cols=35 Identities=11% Similarity=-0.058 Sum_probs=31.0
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||++.+|+|..|...|.+++++..++.+-
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~~~~~~~~~l~v~~ 121 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRNDTDSEVEFLCLIP 121 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEc
Confidence 35789999999999999999999999998877654
No 54
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=97.36 E-value=0.00029 Score=52.63 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=33.4
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
...+++||++++|.|..|...|.|++|++.++.+|.
T Consensus 143 ~~~~~~GD~v~iP~g~~H~~~N~gde~l~~l~v~D~ 178 (368)
T 3nw4_A 143 PVRMSRGDLLLTPGWCFHGHMNDTDQPMAWIDGLDI 178 (368)
T ss_dssp EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEECH
T ss_pred EEEEeCCCEEEECCCCcEEeEeCCCCCeEEEEecch
Confidence 356899999999999999999999999999999985
No 55
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=97.35 E-value=0.00033 Score=42.60 Aligned_cols=31 Identities=13% Similarity=0.136 Sum_probs=28.8
Q ss_pred eecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
.|++||++.+|+|..|...|.+++++..+..
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i 99 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFVV 99 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEEE
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEEE
Confidence 7899999999999999999999998887776
No 56
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=97.34 E-value=0.0006 Score=44.57 Aligned_cols=39 Identities=18% Similarity=0.041 Sum_probs=34.7
Q ss_pred EEeecCCcEEEEccC--ceeEEEecCCcceEEEEeeecCCC
Q 039148 5 IMVLKKGDVFVFLVG--LVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G--~~H~~~N~G~~~av~i~~~~s~np 43 (82)
...|++||++.||.| ..|...|.|+++++++........
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p~~~ 124 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTRTPT 124 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEECCSC
T ss_pred EEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECCCCC
Confidence 457899999999999 999999999999999998876543
No 57
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=97.32 E-value=0.00049 Score=42.13 Aligned_cols=35 Identities=20% Similarity=0.249 Sum_probs=30.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
...|++||++.+|+|..|...|.++ ++.++..+..
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p 114 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSP 114 (126)
T ss_dssp EEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEES
T ss_pred EEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECC
Confidence 3578999999999999999999998 8888877763
No 58
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=97.31 E-value=0.00052 Score=42.11 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=29.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~ 38 (82)
.-.+++||++++|+|..|...|.+++++..++..
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i~ 106 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTIW 106 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEEECSSSCEEEEEEE
T ss_pred EEEECCCcEEEECCCCcEEeEeCCCCCEEEEEEE
Confidence 3578999999999999999999999988776543
No 59
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=97.31 E-value=0.00047 Score=45.70 Aligned_cols=37 Identities=5% Similarity=-0.120 Sum_probs=33.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
...|++||++.+|.|..|...|.|+++++.++.....
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 3578999999999999999999999999999988764
No 60
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=97.28 E-value=0.00074 Score=44.24 Aligned_cols=38 Identities=11% Similarity=-0.038 Sum_probs=34.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
...|++||++.+|.|..|...|.|++++..++.++...
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~ 120 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAAR 120 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSC
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCC
Confidence 35789999999999999999999999999999888654
No 61
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=97.24 E-value=0.00042 Score=50.81 Aligned_cols=36 Identities=17% Similarity=0.070 Sum_probs=32.4
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
...+++||++++|.|..|...|.|+++++.+...|.
T Consensus 140 ~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 140 RTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp EEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECH
T ss_pred EEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECc
Confidence 357899999999999999999999999999888763
No 62
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=97.23 E-value=0.00046 Score=45.47 Aligned_cols=32 Identities=19% Similarity=0.088 Sum_probs=28.6
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~ 38 (82)
..|++||.+.||.|..|...|.|++++ ++..+
T Consensus 146 ~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~ 177 (192)
T 1y9q_A 146 HELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIV 177 (192)
T ss_dssp EEECTTCEEEEECSSSEEEEESSSCEE-EEEEE
T ss_pred EEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEE
Confidence 479999999999999999999999998 66555
No 63
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=97.22 E-value=0.00056 Score=47.53 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=29.5
Q ss_pred EEeecCCcEEEEccCceeEEEecCC-cceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGY-GNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~-~~av~i~~~~s 40 (82)
...|++||.+.||+|..|+..|.|+ +++..+...|.
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~d~ 255 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDC 255 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC----CEEEEEEEEC
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEecC
Confidence 3578999999999999999999999 99998887773
No 64
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=97.14 E-value=0.00069 Score=50.90 Aligned_cols=36 Identities=11% Similarity=-0.078 Sum_probs=33.4
Q ss_pred EEeecCCcEEEEccCceeEEEe-cCCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCN-VGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N-~G~~~av~i~~~~s 40 (82)
...+++||++++|.|..|...| .|++|++.++.+|.
T Consensus 163 ~~~~~~GD~i~~P~g~~H~~~N~~gde~l~~l~v~d~ 199 (394)
T 3bu7_A 163 KVELGANDFVLTPNGTWHEHGILESGTECIWQDGLDI 199 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEECTTCCCEEEEEEECH
T ss_pred EEEEcCCCEEEECcCCCEEEEcCCCCCCEEEEEcccc
Confidence 4578999999999999999999 99999999998874
No 65
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=97.14 E-value=0.0011 Score=45.49 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=34.5
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
.|.-.+++||++++|+|+.||..+..+.+..++-.|....
T Consensus 126 ~~~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~~ 165 (191)
T 1vr3_A 126 WIRISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGEP 165 (191)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSSC
T ss_pred EEEEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCCC
Confidence 4566899999999999999999988888888888888664
No 66
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=97.10 E-value=0.001 Score=45.87 Aligned_cols=34 Identities=18% Similarity=0.046 Sum_probs=32.0
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
..|++||.+.+|.|..|..+|.|++++.++.++.
T Consensus 186 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~ 219 (243)
T 3h7j_A 186 VEMKFGTAYFCEPREDHGAINRSEKESKSINIFF 219 (243)
T ss_dssp EEECTTCEEEECTTCCEEEEECSSSCEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEc
Confidence 4689999999999999999999999999999887
No 67
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=96.99 E-value=0.00077 Score=45.66 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=32.5
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
.|...+++||++++|+|+.||..+..+....++-.|...
T Consensus 121 ~~~~~l~~GDli~IP~g~~H~~~~~~~~~~~~ir~F~~~ 159 (179)
T 1zrr_A 121 VFQVLCEKNDLISVPAHTPHWFDMGSEPNFTAIRIFDNP 159 (179)
T ss_dssp EEEEECCCSCEEEECTTCCBCCCCSSCSSCEEEEEECCG
T ss_pred EEEEEECCCCEEEECCCCeEeeecCCCceEEEEEeccCC
Confidence 455679999999999999999888777778888888765
No 68
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=96.95 E-value=0.0019 Score=40.02 Aligned_cols=36 Identities=14% Similarity=0.109 Sum_probs=29.0
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
...|++||++++|+|..|...|.++. +..+..+...
T Consensus 84 ~~~l~~Gd~~~ip~g~~H~~~~~~~~-~~~l~~~~p~ 119 (134)
T 2o8q_A 84 AVMLEAGGSAFQPPGVRHRELRHSDD-LEVLEIVSPA 119 (134)
T ss_dssp EEEEETTCEEECCTTCCEEEEEECTT-CEEEEEESST
T ss_pred EEEecCCCEEEECCCCcEEeEeCCCC-eEEEEEECCC
Confidence 35789999999999999999998874 5666565543
No 69
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=96.93 E-value=0.0022 Score=38.51 Aligned_cols=34 Identities=29% Similarity=0.262 Sum_probs=28.5
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
...|++||++.+|+|..|...|.+ ++.++..+..
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l~v~~p 106 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVCPT--GGILIDTFSP 106 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS--CEEEEEEEES
T ss_pred EEEeCCCCEEEECcCCceeeEeCC--CcEEEEEECC
Confidence 357899999999999999999998 6777776643
No 70
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.0018 Score=43.48 Aligned_cols=33 Identities=15% Similarity=0.026 Sum_probs=30.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~ 38 (82)
-+|++||.+.||+|..|...|.++++|.++.+.
T Consensus 130 ~~L~~Gds~~iP~g~~H~~~N~~d~~Arll~Vq 162 (166)
T 2vpv_A 130 FLSVKGSTFQIPAFNEYAIANRGNDEAKMFFVQ 162 (166)
T ss_dssp EEEETTCEEEECTTCEEEEEECSSSCEEEEEEE
T ss_pred EEEcCCCEEEECCCCCEEEEECCCCCEEEEEEE
Confidence 478999999999999999999999999888763
No 71
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=96.89 E-value=0.002 Score=45.39 Aligned_cols=37 Identities=14% Similarity=-0.006 Sum_probs=32.2
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
...|++||+++||.|..|+..|.|+ ++.++..+....
T Consensus 258 ~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~~ 294 (337)
T 1y3t_A 258 EIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGL 294 (337)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESST
T ss_pred EEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCcc
Confidence 3578999999999999999999998 898888876543
No 72
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=96.89 E-value=0.0018 Score=45.36 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=31.5
Q ss_pred EEeecCCcEEEEccCceeEEEecCC-cceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGY-GNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~-~~av~i~~~~ 39 (82)
...|++||++.||+|..|+.+|.|+ +++..+...|
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~~ 257 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSKD 257 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEEc
Confidence 3579999999999999999999999 9988888765
No 73
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=96.89 E-value=0.0016 Score=38.48 Aligned_cols=26 Identities=19% Similarity=0.078 Sum_probs=23.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcc
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGN 31 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~ 31 (82)
..|++||++.+|+|..|...|.++..
T Consensus 76 ~~l~~Gd~~~ip~~~~H~~~~~~~~~ 101 (110)
T 2q30_A 76 IPAPRGAVLVAPISTPHGVRAVTDMK 101 (110)
T ss_dssp EEECTTEEEEEETTSCEEEEESSSEE
T ss_pred EEECCCCEEEeCCCCcEEEEEcCCcE
Confidence 57899999999999999999988643
No 74
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=96.85 E-value=0.0019 Score=39.64 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=28.7
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||.+.+|+|..|...|.++....++..+.
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~~~v~p 109 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLV 109 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEEESSSEEEEEEEECC
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCcEEEEEEEeC
Confidence 46789999999999999999999876666555443
No 75
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=96.82 E-value=0.0018 Score=40.49 Aligned_cols=34 Identities=6% Similarity=-0.030 Sum_probs=27.0
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
..+|++||++.||+|..|+..|.+ +++.++.+..
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~~~~-~~~~~l~v~~ 111 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIRSHE-EGALTAYVTY 111 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEEEEE-EEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEEcCC-CCeEEEEEEC
Confidence 357999999999999999987775 6666665543
No 76
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=96.79 E-value=0.0024 Score=44.19 Aligned_cols=35 Identities=9% Similarity=0.022 Sum_probs=32.2
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
..|++||.+.++.+..|+.+|.|++|+..+..=|.
T Consensus 206 ~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd~ 240 (246)
T 1sfn_A 206 YPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKDM 240 (246)
T ss_dssp EEEETTCEEEECTTCCEEEEEESSSCEEEEEEEEC
T ss_pred EEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEec
Confidence 47999999999999999999999999998887764
No 77
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=96.77 E-value=0.002 Score=45.58 Aligned_cols=41 Identities=10% Similarity=0.057 Sum_probs=36.1
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec-CCCcc
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS-QNLGV 45 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s-~npg~ 45 (82)
...|++||++.++.|..|+.+|.|++|+..+...|. .+|..
T Consensus 231 ~~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d~nr~~~~ 272 (278)
T 1sq4_A 231 WVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDVNRHMRL 272 (278)
T ss_dssp EEEEETTCEEEEEESCCEEEECCSSSCEEEEEEEECSSCCCC
T ss_pred EEEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEEcCCCccc
Confidence 357899999999999999999999999999999995 45543
No 78
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=96.65 E-value=0.0019 Score=37.63 Aligned_cols=25 Identities=20% Similarity=0.313 Sum_probs=22.2
Q ss_pred EEeecCCcEEEEccCceeEEEecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGY 29 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~ 29 (82)
...+++||++++|+|..|...|.++
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~ 93 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEE 93 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCC
Confidence 4578999999999999999999853
No 79
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=96.58 E-value=0.0037 Score=44.22 Aligned_cols=35 Identities=9% Similarity=-0.141 Sum_probs=31.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||.+.||.|..|...|.|++++.++....
T Consensus 109 ~~~L~~GD~i~ip~~~~H~~~N~g~~~~~~l~v~~ 143 (278)
T 1sq4_A 109 VHAMQPGGYAFIPPGADYKVRNTTGQHTRFHWIRK 143 (278)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEECCCCCEEEEEEEe
Confidence 35799999999999999999999999998887764
No 80
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=96.54 E-value=0.0049 Score=36.83 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=24.7
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
..+++||++.+|+|..|...|.++ +..+..
T Consensus 80 ~~l~~Gd~~~ip~~~~H~~~~~~~--~~~~~v 109 (115)
T 1yhf_A 80 YRVAEGQTIVMPAGIPHALYAVEA--FQMLLV 109 (115)
T ss_dssp EEEETTCEEEECTTSCEEEEESSC--EEEEEE
T ss_pred EEECCCCEEEECCCCCEEEEECCC--ceEEEE
Confidence 578999999999999999999884 444443
No 81
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=96.52 E-value=0.0053 Score=41.21 Aligned_cols=39 Identities=18% Similarity=0.280 Sum_probs=34.7
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
.+.+.+||++++|.|-+|...|.++++|+.+-++.-...
T Consensus 118 ~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlHvY~pp~~ 156 (171)
T 3eqe_A 118 SYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPLE 156 (171)
T ss_dssp EEEEETTCEEEECTTCEEEEECCSSSCEEEEEEEESCCC
T ss_pred eEEeCCCcEEEeCCCCEEEEECCCCCCEEEEEEeCCCcc
Confidence 467899999999999999999999999999998875543
No 82
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=96.51 E-value=0.0041 Score=41.11 Aligned_cols=33 Identities=9% Similarity=-0.089 Sum_probs=28.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
..+|++||.+.||+|..|...|. +++.++++..
T Consensus 103 ~~~l~~GD~i~iP~G~~h~~~n~--~~a~~l~V~~ 135 (151)
T 4axo_A 103 KVSASSGELIFIPKGSKIQFSVP--DYARFIYVTY 135 (151)
T ss_dssp EEEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCEEEEEeC--CCEEEEEEEC
Confidence 46799999999999999999998 6787777654
No 83
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=96.44 E-value=0.0051 Score=42.61 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=31.9
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||.+.||.|..|...|.|++++.++.+..
T Consensus 100 ~~~L~~Gd~~~~~~~~~H~~~N~~~~~~~~l~v~~ 134 (261)
T 1rc6_A 100 TFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKR 134 (261)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEe
Confidence 35799999999999999999999999998888774
No 84
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=96.43 E-value=0.003 Score=37.67 Aligned_cols=29 Identities=14% Similarity=0.222 Sum_probs=23.4
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
...|++||++.+|+|..|...|.+ ++.++
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~--~~~~l 96 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSEN--GCSLV 96 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEEE--EEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeCC--CeEEE
Confidence 357899999999999999999963 44433
No 85
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=96.43 E-value=0.0051 Score=46.15 Aligned_cols=36 Identities=14% Similarity=0.086 Sum_probs=32.0
Q ss_pred EEeecCCcEEEEccCceeEEEecC-CcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~s 40 (82)
...+++||++++|.|..|...|.| ++++.+++..|.
T Consensus 333 ~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~D~ 369 (394)
T 3bu7_A 333 RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFNDF 369 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEEESH
T ss_pred EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEeeCH
Confidence 357899999999999999999999 899998888763
No 86
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=96.41 E-value=0.003 Score=38.62 Aligned_cols=28 Identities=25% Similarity=0.162 Sum_probs=24.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVV 33 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av 33 (82)
..|++||+++||+|..|...|.++....
T Consensus 70 ~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 70 YVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp EEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 5799999999999999999998765443
No 87
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=96.28 E-value=0.0065 Score=44.19 Aligned_cols=34 Identities=15% Similarity=-0.073 Sum_probs=29.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||.+.||+|..|...|.++++ .++..+.
T Consensus 95 ~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~ 128 (350)
T 1juh_A 95 TRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIV 128 (350)
T ss_dssp EEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEc
Confidence 567999999999999999999999886 6666655
No 88
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=96.26 E-value=0.0067 Score=42.41 Aligned_cols=35 Identities=11% Similarity=0.079 Sum_probs=31.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||.+.||.|..|...|.|++++.++.+..
T Consensus 103 ~~~L~~GD~~~~~~~~~H~~~N~~~~~~~~l~v~~ 137 (274)
T 1sef_A 103 THELEAGGYAYFTPEMKMYLANAQEADTEVFLYKK 137 (274)
T ss_dssp EEEEETTEEEEECTTSCCEEEESSSSCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEe
Confidence 35799999999999999999999999998888763
No 89
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=96.12 E-value=0.0096 Score=35.72 Aligned_cols=31 Identities=16% Similarity=0.147 Sum_probs=24.7
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
...|++||.+.+|+|..|...|.+ ++..+..
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~~~--~~~~~~i 107 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAGKG--RFKMLQI 107 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEEEE--EEEEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEeCC--CcEEEEE
Confidence 357999999999999999999974 5544443
No 90
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=96.07 E-value=0.007 Score=41.57 Aligned_cols=36 Identities=14% Similarity=-0.113 Sum_probs=30.8
Q ss_pred EEeecCCcEE-EEccCceeEEEecCCcceEEEEeeec
Q 039148 5 IMVLKKGDVF-VFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~-vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
...|++||.+ ++|.|..|...|.|+++++++-...-
T Consensus 73 ~~~l~~Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~r~ 109 (243)
T 3h7j_A 73 TRKMTALESAYIAPPHVPHGARNDTDQEVIAIDIKRL 109 (243)
T ss_dssp EEEEETTTCEEEECTTCCEEEEECSSSCEEEEEEEEC
T ss_pred EEEECCCCEEEEcCCCCcEeeEeCCCCcEEEEEEecc
Confidence 3578999988 69999999999999999988776543
No 91
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=96.03 E-value=0.012 Score=42.02 Aligned_cols=35 Identities=11% Similarity=0.082 Sum_probs=31.2
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...+++||++.+|.+..||++|.|++|+..+..=|
T Consensus 226 ~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd 260 (266)
T 4e2q_A 226 WYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKD 260 (266)
T ss_dssp EEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEcc
Confidence 35789999999999999999999999998876655
No 92
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=95.94 E-value=0.015 Score=40.85 Aligned_cols=35 Identities=14% Similarity=-0.021 Sum_probs=30.0
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
..|++||++.||+|..|...|.++ ++.++..++..
T Consensus 87 ~~l~~Gd~~~~p~~~~H~~~n~~~-~~~~~~~~~p~ 121 (337)
T 1y3t_A 87 YLLISGDYANIPAGTPHSYRMQSH-RTRLVSYTMKG 121 (337)
T ss_dssp EEECTTCEEEECTTCCEEEEECST-TEEEEEEEETT
T ss_pred EEECCCCEEEECCCCcEEEEECCC-CeEEEEEECCC
Confidence 579999999999999999999988 68777776543
No 93
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=95.82 E-value=0.014 Score=38.69 Aligned_cols=31 Identities=13% Similarity=0.331 Sum_probs=25.7
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEE
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIV 36 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~ 36 (82)
+.-+|++||++.+|.|..|...|.+. .++|.
T Consensus 201 ~~~~l~pGD~LyiP~gW~H~V~~l~~--sisvn 231 (235)
T 4gjz_A 201 LSCILSPGEILFIPVKYWHYVRALDL--SFSVS 231 (235)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSS--EEEEE
T ss_pred EEEEECCCCEEEeCCCCcEEEEECCC--EEEEE
Confidence 56689999999999999999999874 44443
No 94
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=95.79 E-value=0.015 Score=42.48 Aligned_cols=35 Identities=20% Similarity=0.081 Sum_probs=29.8
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEee
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~ 38 (82)
+.-+|++||++.+|+|..|+..+.++++.+.++.-
T Consensus 218 ~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~ 252 (342)
T 1vrb_A 218 EIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG 252 (342)
T ss_dssp EEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC
T ss_pred eEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC
Confidence 56689999999999999999999976677666655
No 95
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=95.73 E-value=0.019 Score=42.00 Aligned_cols=41 Identities=20% Similarity=0.152 Sum_probs=32.4
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
.+.-++++||++.+|.|..|+.+|.++.=++.+--.+..|-
T Consensus 255 ~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl 295 (336)
T 3k2o_A 255 PLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNF 295 (336)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTH
T ss_pred eEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccH
Confidence 36778999999999999999999999765555555555553
No 96
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=95.70 E-value=0.016 Score=36.86 Aligned_cols=32 Identities=22% Similarity=0.089 Sum_probs=26.0
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
.+|++||.+.||+|..|...|. +++..+.+..
T Consensus 95 ~~l~~GD~i~~p~g~~h~~~~~--~~~~~l~v~~ 126 (133)
T 2pyt_A 95 MIAKAGDVMFIPKGSSIEFGTP--TSVRFLYVAW 126 (133)
T ss_dssp EEEETTCEEEECTTCEEEEEEE--EEEEEEEEEE
T ss_pred EEECCCcEEEECCCCEEEEEeC--CCEEEEEEEc
Confidence 4799999999999999988874 5677776653
No 97
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=95.67 E-value=0.012 Score=42.98 Aligned_cols=33 Identities=12% Similarity=-0.046 Sum_probs=28.0
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
+-.+++||++++|.+..|...|. +++.+++..|
T Consensus 307 ~~~~~~GD~~~vP~~~~H~~~n~--e~~~l~~~~d 339 (354)
T 2d40_A 307 TFSFSAKDIFVVPTWHGVSFQTT--QDSVLFSFSD 339 (354)
T ss_dssp EEEEETTCEEEECTTCCEEEEEE--EEEEEEEEES
T ss_pred EEEEcCCCEEEECCCCeEEEEeC--CCEEEEEEcC
Confidence 35689999999999999999994 7788877755
No 98
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=95.30 E-value=0.031 Score=42.62 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=33.8
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
.+.-++++||++.+|.|..|+.+|..++=++.---+++.|-
T Consensus 300 ~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl 340 (447)
T 3kv4_A 300 CYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNI 340 (447)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTH
T ss_pred eEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCH
Confidence 36678999999999999999999998876666666667663
No 99
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=95.21 E-value=0.045 Score=33.95 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.4
Q ss_pred EEeecCCcEEEEccCceeEEEecCC-cceE
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGY-GNVV 33 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~-~~av 33 (82)
.-.+++||++++|+|..|...+.++ ++..
T Consensus 57 ~~~l~~Gd~~~i~p~~~H~~~~~~~~~~~~ 86 (164)
T 2arc_A 57 EFVCRPGDILLFPPGEIHHYGRHPEAREWY 86 (164)
T ss_dssp EEEECTTCEEEECTTCCEEEEECTTSSEEE
T ss_pred EEEecCCeEEEEcCCCCEEEEeCCCCCcEE
Confidence 3578999999999999999888763 5443
No 100
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=95.19 E-value=0.018 Score=36.34 Aligned_cols=28 Identities=18% Similarity=0.102 Sum_probs=24.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVV 33 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av 33 (82)
.+|++||.++||+|..|...|.+....+
T Consensus 89 ~~l~~GD~~~ip~g~~h~~~~~~~~rK~ 116 (123)
T 3bcw_A 89 HAVKAGDAFIMPEGYTGRWEVDRHVKKI 116 (123)
T ss_dssp EEEETTCEEEECTTCCCEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEECCceeEE
Confidence 5799999999999999999998765443
No 101
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=95.13 E-value=0.036 Score=42.28 Aligned_cols=42 Identities=24% Similarity=0.145 Sum_probs=35.1
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCc
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLG 44 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg 44 (82)
.+.-++++||++.+|.|..|..+|..++-++..--+++.|-.
T Consensus 265 ~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~ 306 (451)
T 2yu1_A 265 CQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIP 306 (451)
T ss_dssp CEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHH
T ss_pred ceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHH
Confidence 456678999999999999999999988777777777777743
No 102
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=94.98 E-value=0.054 Score=39.18 Aligned_cols=33 Identities=18% Similarity=0.041 Sum_probs=27.9
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
.+.-+|++||++.+|.|..|+..|.+ ..++|+.
T Consensus 239 ~~~~~L~pGD~LyiP~gWwH~v~~l~--~sisvn~ 271 (338)
T 3al5_A 239 RYECSLEAGDVLFIPALWFHNVISEE--FGVGVNI 271 (338)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEESS--CEEEEEE
T ss_pred CEEEEECCCCEEEECCCCeEEEeeCC--CEEEEEE
Confidence 46778999999999999999999995 4566664
No 103
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=94.97 E-value=0.072 Score=38.77 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=32.5
Q ss_pred eEEEeecCCcEEEEccCceeEEEecC-CcceEEEEeeecCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVG-YGNVVAIVAFSSQN 42 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G-~~~av~i~~~~s~n 42 (82)
.+.-+|++||++.+|.|.-|...|.+ .+..+++...-...
T Consensus 260 ~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~~~~ 300 (349)
T 3d8c_A 260 GYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA 300 (349)
T ss_dssp EEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEEECC
T ss_pred cEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEcCCC
Confidence 46778999999999999999999998 46677777655433
No 104
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=94.86 E-value=0.032 Score=41.71 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=32.5
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
.+.-++++||++.+|.|..|+.+|..++=++.---+++.|-
T Consensus 216 ~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl 256 (371)
T 3k3o_A 216 CYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNI 256 (371)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTH
T ss_pred eEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhH
Confidence 46678999999999999999999997765555555566653
No 105
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.76 E-value=0.034 Score=42.74 Aligned_cols=40 Identities=15% Similarity=0.079 Sum_probs=31.2
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
.+.-++++||++.+|.|..|+.+|..++=++.---+++.|
T Consensus 335 ~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~n 374 (488)
T 3kv5_D 335 CYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLN 374 (488)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTT
T ss_pred eEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccC
Confidence 4567899999999999999999999765554444455555
No 106
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=94.70 E-value=0.058 Score=41.70 Aligned_cols=38 Identities=21% Similarity=0.252 Sum_probs=30.5
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecC
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQ 41 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~ 41 (82)
+.-+|++||++.+|+|..|+..+.+++..+-++.--.+
T Consensus 228 ~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~ 265 (489)
T 4diq_A 228 LQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQ 265 (489)
T ss_dssp EEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECT
T ss_pred eEEEECCCCEEEECCCCceEEEecCCCceEEEeecccC
Confidence 56789999999999999999999987666555554433
No 107
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=94.69 E-value=0.047 Score=37.06 Aligned_cols=25 Identities=20% Similarity=0.234 Sum_probs=21.7
Q ss_pred EEeecCCcEEEEccCceeEEEe-cCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCN-VGY 29 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N-~G~ 29 (82)
...+++||.+.+|+|..|+.+| .++
T Consensus 192 ~~~l~~Gd~i~ip~~~~H~~~~~~~~ 217 (227)
T 3rns_A 192 PFIVKKGESAVLPANIPHAVEAETEN 217 (227)
T ss_dssp EEEEETTEEEEECTTSCEEEECCSSC
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCC
Confidence 3578999999999999999999 543
No 108
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=94.62 E-value=0.04 Score=41.56 Aligned_cols=41 Identities=15% Similarity=0.100 Sum_probs=31.4
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
.+.-.+++||++.+|.|..|+.+|..++=++.---+++.|-
T Consensus 244 ~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl 284 (397)
T 3kv9_A 244 CYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNI 284 (397)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTH
T ss_pred eEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhH
Confidence 46678999999999999999999996654444445555553
No 109
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=94.52 E-value=0.043 Score=41.32 Aligned_cols=41 Identities=12% Similarity=0.013 Sum_probs=33.1
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCC
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
.+.-.+++||++.+|.|..|+.+|..++=++.---+++.|-
T Consensus 243 ~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl 283 (392)
T 3pua_A 243 CYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSV 283 (392)
T ss_dssp CEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCH
T ss_pred eEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhH
Confidence 35678999999999999999999998776666556666663
No 110
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=94.44 E-value=0.069 Score=35.53 Aligned_cols=31 Identities=16% Similarity=-0.082 Sum_probs=25.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
...|++||++++|+|..|...+ ++.+++.+.
T Consensus 87 ~~~l~~GD~v~IPpg~~H~i~g----~l~~L~I~~ 117 (157)
T 4h7l_A 87 SYPLTKLLAISIPPLVRHRIVG----EATIINIVS 117 (157)
T ss_dssp EEECCTTEEEEECTTCCEEEES----CEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCeEeeEC----CEEEEEEEC
Confidence 3578999999999999999973 677777665
No 111
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=94.27 E-value=0.046 Score=36.97 Aligned_cols=35 Identities=14% Similarity=0.166 Sum_probs=27.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
..|++||.+.+|+|+.||..|. .+. ++|.-+++-+
T Consensus 121 i~L~pGesvtIppg~~H~f~ag-eeg-vli~EvSt~~ 155 (175)
T 2y0o_A 121 IELEPGGQYTIPPNTKHWFQAG-EEG-AVVTEMSSTS 155 (175)
T ss_dssp EEECTTCEEEECTTCCEEEEEE-EEE-EEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEEEeC-CCC-EEEEEEeCCC
Confidence 4789999999999999999993 222 6666666543
No 112
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=94.17 E-value=0.092 Score=35.91 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=32.1
Q ss_pred EEeecCCcEEEEcc--CceeEEEec-CCcceEEEEeeec
Q 039148 5 IMVLKKGDVFVFLV--GLVHFKCNV-GYGNVVAIVAFSS 40 (82)
Q Consensus 5 ~~~l~~GDv~vfP~--G~~H~~~N~-G~~~av~i~~~~s 40 (82)
.+++++||++.|+. |-+|-..|. ++++++.+-++.-
T Consensus 129 ~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~ 167 (208)
T 2gm6_A 129 PTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGA 167 (208)
T ss_dssp CEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESS
T ss_pred eEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcC
Confidence 36799999999999 999999999 7999999988754
No 113
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=93.96 E-value=0.1 Score=36.45 Aligned_cols=34 Identities=12% Similarity=0.173 Sum_probs=30.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
+++.+||++.+|.|..|..- .+++|++++-+.-.
T Consensus 173 ~~l~pGd~v~ipsgv~Ha~r-t~dePllalwvW~G 206 (217)
T 4b29_A 173 LMLEPGQTRFHPANAPHAMT-TLTDPILTLVLWRG 206 (217)
T ss_dssp EEECTTCEEEECTTCCEEEE-CCSSCEEEEEEEES
T ss_pred EecCCCCEEEcCCCCceeEE-ECCccEEEEEEEeC
Confidence 56899999999999999997 69999998887753
No 114
>1yfu_A 3-hydroxyanthranilate-3,4-dioxygenase; cupin, oxidoreductase; 1.90A {Cupriavidus metallidurans} SCOP: b.82.1.20 PDB: 1yfw_A* 1yfx_A* 1yfy_A*
Probab=93.81 E-value=0.096 Score=35.55 Aligned_cols=24 Identities=25% Similarity=0.277 Sum_probs=20.9
Q ss_pred EEeecCCcEEEEccCceeEEEecC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVG 28 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G 28 (82)
.-+|++||+|++|+|+.|.-.-.+
T Consensus 78 ~v~l~eGE~f~lP~gvpH~P~r~~ 101 (174)
T 1yfu_A 78 RADLKEGDIFLLPPHVRHSPQRPE 101 (174)
T ss_dssp EEEECTTCEEEECTTCCEEEEBCC
T ss_pred eEEECCCCEEEeCCCCCcCccccC
Confidence 568999999999999999886655
No 115
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=93.60 E-value=0.088 Score=36.21 Aligned_cols=32 Identities=16% Similarity=0.042 Sum_probs=27.0
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~ 38 (82)
...|++||.+.||.|..|...|. +++.++...
T Consensus 87 ~~~l~~Gd~~~~p~~~~H~~~n~--~~~~~l~v~ 118 (246)
T 1sfn_A 87 TRTLREYDYVYLPAGEKHMLTAK--TDARVSVFE 118 (246)
T ss_dssp EEEECTTEEEEECTTCCCEEEEE--EEEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeC--CCEEEEEEE
Confidence 35799999999999999999999 677665554
No 116
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=93.43 E-value=0.13 Score=37.29 Aligned_cols=33 Identities=21% Similarity=0.111 Sum_probs=27.2
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
.+|++||++++|+|..|-.+|.++. +.++....
T Consensus 293 ~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~ 325 (350)
T 1juh_A 293 TELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSS 325 (350)
T ss_dssp EEECTTCEEEECTTCCEEEEESSSS-EEEEEEEE
T ss_pred EEeCCCCEEEECCCCCEEEEecCCe-EEEEEEec
Confidence 4789999999999999999998765 55555554
No 117
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=93.27 E-value=0.19 Score=34.15 Aligned_cols=39 Identities=15% Similarity=-0.023 Sum_probs=33.2
Q ss_pred EEeecCCcEEEE-ccCceeEEEecC-CcceEEEEeeecCCC
Q 039148 5 IMVLKKGDVFVF-LVGLVHFKCNVG-YGNVVAIVAFSSQNL 43 (82)
Q Consensus 5 ~~~l~~GDv~vf-P~G~~H~~~N~G-~~~av~i~~~~s~np 43 (82)
.+++++||+..| |.+-+|...|.+ +++|+.+=++.-...
T Consensus 122 ~~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlHvY~pp~~ 162 (200)
T 3eln_A 122 ERTLRENQCAYINDSIGLHRVENVSHTEPAVSLHLYSPPFD 162 (200)
T ss_dssp EEEECTTCEEEECTTTCEEEEECCCSSCCEEEEEEEESCCS
T ss_pred eEEeCCCCEEEecCCCcEEEEECCCCCCCEEEEEeCCCCcc
Confidence 478899999999 888899999999 789999888875543
No 118
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=93.11 E-value=0.11 Score=34.99 Aligned_cols=34 Identities=15% Similarity=0.038 Sum_probs=30.9
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
.++.+||.+.+|.|..|.-.+.+.+.+++++++|
T Consensus 161 ~~~~~Gd~~~~p~g~~H~p~a~~~~gc~~l~~~d 194 (195)
T 2q1z_B 161 DRFGAGDIEIADQELEHTPVAERGLDCICLAATD 194 (195)
T ss_dssp SEEETTCEEEECSSCCCCCEECSSSCEEEEEEEC
T ss_pred EEECCCeEEEeCcCCccCCEeCCCCCEEEEEEec
Confidence 4689999999999999999998888899998876
No 119
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.08 E-value=0.094 Score=40.94 Aligned_cols=39 Identities=18% Similarity=0.129 Sum_probs=30.7
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
+.-.+++||++.+|.|.+|+-||..++=|+.---+++.|
T Consensus 366 ~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~n 404 (528)
T 3pur_A 366 KRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGN 404 (528)
T ss_dssp EEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGG
T ss_pred EEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhh
Confidence 456889999999999999999999766555545555555
No 120
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=93.07 E-value=0.097 Score=34.41 Aligned_cols=35 Identities=9% Similarity=0.162 Sum_probs=26.0
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
.-+|++|+++++|+|+-|...=....-.+.|=--|
T Consensus 77 ~V~l~~Ge~yvVPkGveH~p~a~~e~~vLLiEp~n 111 (140)
T 3d0j_A 77 LTLMEKGKVYNVPAECWFYSITQKDTKMMYVQDSN 111 (140)
T ss_dssp EEECCTTCCEEECTTCEEEEEECTTCEEEEEEESC
T ss_pred eEEecCCCEEEeCCCccCcccCCCceEEEEEEeCC
Confidence 46789999999999999998876555444443333
No 121
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=93.01 E-value=0.13 Score=34.78 Aligned_cols=31 Identities=13% Similarity=-0.003 Sum_probs=25.3
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
...|++||.+++|+|..|...|.. +++.+..
T Consensus 76 ~~~l~~Gd~~~~p~~~~H~~~a~~--~~~~l~i 106 (227)
T 3rns_A 76 KKTISNGDFLEITANHNYSIEARD--NLKLIEI 106 (227)
T ss_dssp EEEEETTEEEEECSSCCEEEEESS--SEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEECC--CcEEEEE
Confidence 468999999999999999999875 4555543
No 122
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=92.87 E-value=0.18 Score=37.50 Aligned_cols=32 Identities=19% Similarity=0.022 Sum_probs=27.0
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
-.+.+||+|++|.+..|...|. +++.+++.-|
T Consensus 319 ~~w~~gD~fvvP~w~~h~~~n~--~~a~Lf~~~D 350 (368)
T 3nw4_A 319 TKLEKGDMFVVPSWVPWSLQAE--TQFDLFRFSD 350 (368)
T ss_dssp EEECTTCEEEECTTCCEEEEES--SSEEEEEEES
T ss_pred EEecCCCEEEECCCCcEEEEeC--CCEEEEEEeC
Confidence 4679999999999999999997 5787776655
No 123
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=92.45 E-value=0.18 Score=35.49 Aligned_cols=28 Identities=29% Similarity=0.345 Sum_probs=25.5
Q ss_pred cEEEEccCceeEEEecCCcceEEEEeee
Q 039148 12 DVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 12 Dv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
|++.+|+|..|-..|.|+++++++..-|
T Consensus 327 ~~~~ip~g~~h~~~n~~~~~~~~~~~~~ 354 (369)
T 3st7_A 327 EVVDIPVGYTHNIENLGDTDMVTIMWVN 354 (369)
T ss_dssp CEEEECTTEEEEEEECSSSCEEEEEEES
T ss_pred eEEEeCCCceEEeEEcCCCcEEEEEecC
Confidence 9999999999999999999998887655
No 124
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=92.41 E-value=0.27 Score=33.46 Aligned_cols=24 Identities=17% Similarity=0.385 Sum_probs=20.5
Q ss_pred EEEeecCCcEEEEccCceeEEEec
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNV 27 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~ 27 (82)
-.-+|++||+|++|+|+-|.-.-.
T Consensus 80 ~dv~i~eGdmfllP~gvpHsP~r~ 103 (176)
T 1zvf_A 80 IDIIINEGDSYLLPGNVPHSPVRF 103 (176)
T ss_dssp EEEEECTTEEEEECTTCCEEEEEC
T ss_pred eeEEECCCCEEEcCCCCCcCCccc
Confidence 356899999999999999998554
No 125
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=92.23 E-value=0.21 Score=32.73 Aligned_cols=35 Identities=11% Similarity=0.094 Sum_probs=30.9
Q ss_pred eecCCcEEEEccCceeEEEec--CCcceEEEEeeecC
Q 039148 7 VLKKGDVFVFLVGLVHFKCNV--GYGNVVAIVAFSSQ 41 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~--G~~~av~i~~~~s~ 41 (82)
++++||.+..|.|..|...+. +++.++++.+.+-.
T Consensus 81 ~~~~Gd~~~~P~g~~H~~~~~~~~~e~~~~~~~~~G~ 117 (159)
T 3ebr_A 81 VAHAGSVVYETASTRHTPQSAYAEGPDIITFNIVAGE 117 (159)
T ss_dssp CBCTTCEEEECSSEEECEEESSSSSSCEEEEEEEESC
T ss_pred EECCCeEEEECCCCcceeEeCCCCCCCEEEEEEecCc
Confidence 689999999999999999999 78899888876643
No 126
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=92.17 E-value=0.28 Score=37.13 Aligned_cols=26 Identities=27% Similarity=0.322 Sum_probs=23.3
Q ss_pred EEEeecCCcEEEEccCceeEEEecCC
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGY 29 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~ 29 (82)
+.-+|++||++.+|+|..|+....++
T Consensus 199 ~~~~L~pGD~LYiP~g~~H~~~s~~~ 224 (442)
T 2xdv_A 199 HEFMLKPGDLLYFPRGTIHQADTPAG 224 (442)
T ss_dssp EEEEECTTCEEEECTTCEEEEECCSS
T ss_pred eEEEECCCcEEEECCCceEEEEecCC
Confidence 56689999999999999999999863
No 127
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=91.34 E-value=0.52 Score=33.05 Aligned_cols=33 Identities=18% Similarity=-0.035 Sum_probs=26.1
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
.++++||+++||+|+.|-....+.... .+.+++
T Consensus 85 ~~~~~Gd~~~ip~G~~~~w~~~~~~~~-~y~~~~ 117 (238)
T 3myx_A 85 VTLSTGESAVIGRGTQVRIDAQPESLW-AFCAST 117 (238)
T ss_dssp EEEETTCEEEECTTCCEEEEECTTEEE-EEEEEC
T ss_pred EEEcCCCEEEECCCCEEEEEecCCeEE-EEEecc
Confidence 578999999999999888877777644 445566
No 128
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=89.66 E-value=0.19 Score=31.79 Aligned_cols=19 Identities=11% Similarity=0.169 Sum_probs=16.0
Q ss_pred EeecCCcEEEEccCceeEE
Q 039148 6 MVLKKGDVFVFLVGLVHFK 24 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~ 24 (82)
.++++||+++||+|...-.
T Consensus 82 ~~l~aGD~~~~P~G~~gtW 100 (116)
T 3es4_A 82 VKIGPGSIVSIAKGVPSRL 100 (116)
T ss_dssp EEECTTEEEEECTTCCEEE
T ss_pred EEECCCCEEEECCCCeEEE
Confidence 5899999999999986543
No 129
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=89.47 E-value=0.48 Score=33.66 Aligned_cols=32 Identities=13% Similarity=-0.078 Sum_probs=26.6
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
.+|++||.+.||.|..|...|. ++|.++..--
T Consensus 111 ~~L~~Gds~y~p~~~~H~~~N~--~~Ar~l~V~k 142 (266)
T 4e2q_A 111 KKLTVDSYAYLPPNFHHSLDCV--ESATLVVFER 142 (266)
T ss_dssp EEECTTEEEEECTTCCCEEEES--SCEEEEEEEE
T ss_pred EEEcCCCEEEECCCCCEEEEeC--CCEEEEEEEe
Confidence 4799999999999999999995 5777666543
No 130
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=88.44 E-value=0.95 Score=31.09 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=31.5
Q ss_pred EeecCCcEEEEccC--ceeEEEec-CCcceEEEEeeecCC
Q 039148 6 MVLKKGDVFVFLVG--LVHFKCNV-GYGNVVAIVAFSSQN 42 (82)
Q Consensus 6 ~~l~~GDv~vfP~G--~~H~~~N~-G~~~av~i~~~~s~n 42 (82)
.++.+||+..|+.+ -+|-..|. ++++++.+=++.-..
T Consensus 124 ~~l~~G~v~~~~p~~g~IH~V~N~~~d~~avSLHvYg~pl 163 (211)
T 3uss_A 124 RRLEPGEVEALSPRIGDVHQVSNAFSDRTSISIHVYGANI 163 (211)
T ss_dssp EEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCG
T ss_pred EEecCCCEEEECCCCCCEEEEccCCCCCCEEEEEEcCCCC
Confidence 67999999999977 89999999 589999888876443
No 131
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=87.27 E-value=0.72 Score=33.46 Aligned_cols=25 Identities=16% Similarity=0.373 Sum_probs=20.8
Q ss_pred EEeecCCcEEEEccCceeEEEecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGY 29 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~ 29 (82)
.-++++||+|++|+|+-|--.-..+
T Consensus 74 ~V~i~eGemfllP~gv~HsP~r~~e 98 (286)
T 2qnk_A 74 DVVIRQGEIFLLPARVPHSPQRFAN 98 (286)
T ss_dssp EEEECTTEEEEECTTCCEEEEECTT
T ss_pred eEEECCCeEEEeCCCCCcCCcccCC
Confidence 4578999999999999998776543
No 132
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=86.07 E-value=1.1 Score=32.91 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=26.0
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
+|.-.=++||.++++.|..||-+|.|-.-.++.
T Consensus 278 vyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~aw 310 (332)
T 2xxz_A 278 VYRFVQRPGDLVWINAGTVHWVQATGWCNNIAW 310 (332)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeEEEE
Confidence 344455899999999999999999997544443
No 133
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=85.04 E-value=1.5 Score=28.87 Aligned_cols=33 Identities=18% Similarity=0.044 Sum_probs=27.3
Q ss_pred eecCCcEEEEccCceeEEEecC--CcceEEEEeee
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVG--YGNVVAIVAFS 39 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G--~~~av~i~~~~ 39 (82)
.+++||.+..|.|..|...... +++++++...+
T Consensus 83 ~~~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~ 117 (165)
T 3cjx_A 83 KQTAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLS 117 (165)
T ss_dssp CEETTEEEEECTTCEECEECCTTCSSCEEEEEEEE
T ss_pred EECCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEe
Confidence 4689999999999999999975 34787777666
No 134
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=83.59 E-value=0.66 Score=32.52 Aligned_cols=18 Identities=17% Similarity=0.278 Sum_probs=15.4
Q ss_pred EEeecCCcEEEEccCcee
Q 039148 5 IMVLKKGDVFVFLVGLVH 22 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H 22 (82)
..++++||+++||+|..-
T Consensus 206 ~~~~~aGD~~~~P~G~~~ 223 (238)
T 3myx_A 206 SLTVNTGDTVFVAQGAPC 223 (238)
T ss_dssp EEEECTTCEEEECTTCEE
T ss_pred EEEECCCCEEEECCCCEE
Confidence 368999999999999853
No 135
>3gbg_A TCP pilus virulence regulatory protein; cupin, helix-turn-helix, ARAC family, activator, DNA-binding transcription, transcription regulation; HET: PAM; 1.90A {Vibrio cholerae}
Probab=82.04 E-value=2 Score=28.86 Aligned_cols=22 Identities=0% Similarity=-0.001 Sum_probs=19.4
Q ss_pred EeecCCcEEEEccCceeEEEec
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNV 27 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~ 27 (82)
-.+++||++++|+|.+|.....
T Consensus 51 ~~l~~g~l~~i~p~~~h~~~~~ 72 (276)
T 3gbg_A 51 YEINSSSIILLKKNSIQRFSLT 72 (276)
T ss_dssp EEECTTEEEEECTTCEEEEEEE
T ss_pred EEEcCCCEEEEcCCCceeeccc
Confidence 4689999999999999987765
No 136
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=81.91 E-value=2 Score=33.47 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=26.1
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
+|.-.=++||.++++.|..||-+|.|-.-.++.
T Consensus 337 vyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~aw 369 (531)
T 3avr_A 337 VYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAW 369 (531)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecceeeeeEE
Confidence 344455899999999999999999997544443
No 137
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=81.73 E-value=0.69 Score=33.12 Aligned_cols=24 Identities=21% Similarity=0.087 Sum_probs=19.1
Q ss_pred EEeecCCcEEEEccCceeEEEecCC
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGY 29 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~ 29 (82)
.-.+++||.|.+|+|.+|- |-.|+
T Consensus 159 ~v~l~pGd~~~ipaGt~HA-~~~G~ 182 (300)
T 1zx5_A 159 TFETTPYDTFVIRPGIPHA-GEGLR 182 (300)
T ss_dssp EEECCTTCEEEECTTCCEE-EESEE
T ss_pred eeECCCCCEEEcCCCCceE-cCCCC
Confidence 4568999999999999997 33343
No 138
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=80.89 E-value=0.76 Score=33.08 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=17.5
Q ss_pred EEeecCCcEEEEccCceeEE
Q 039148 5 IMVLKKGDVFVFLVGLVHFK 24 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~ 24 (82)
.-.+++||.|.+|+|.+|-.
T Consensus 159 ~v~l~pGd~~~ipaGt~HA~ 178 (319)
T 1qwr_A 159 RIKIKPGDFYYVPSGTLHAL 178 (319)
T ss_dssp EEECCTTCEEEECTTCCEEE
T ss_pred EEEcCCCCEEEcCCCCceEe
Confidence 35689999999999999984
No 139
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=80.12 E-value=1.7 Score=27.53 Aligned_cols=33 Identities=6% Similarity=-0.321 Sum_probs=24.5
Q ss_pred EeecCCcEEEEccCceeE-EEecCCcceEEEEeeec
Q 039148 6 MVLKKGDVFVFLVGLVHF-KCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~-~~N~G~~~av~i~~~~s 40 (82)
..+++||.+..|.|..|. ..+. +.++++..++.
T Consensus 86 ~~~~~Gd~~~~p~g~~H~p~~~~--e~~~~l~~~~g 119 (145)
T 2o1q_A 86 DTAIAPGYGYESANARHDKTEFP--VASEFYMSFLG 119 (145)
T ss_dssp EEEESSEEEEECTTCEESCCEEE--EEEEEEEEEES
T ss_pred eEeCCCEEEEECcCCccCCeECC--CCeEEEEEECC
Confidence 578899999999999998 4433 33566666654
No 140
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=78.43 E-value=2.8 Score=32.34 Aligned_cols=29 Identities=7% Similarity=0.090 Sum_probs=21.5
Q ss_pred eecCCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
.+++||++|+|+|+.+-..=.+ |+..+..
T Consensus 199 ~v~pgei~VIPRGi~frv~l~~--p~Rgyi~ 227 (471)
T 1eyb_A 199 LVQPNEICVIQRGMRFSIDVFE--ETRGYIL 227 (471)
T ss_dssp EECTTEEEEECTTCCEEEECSS--SEEEEEE
T ss_pred EeccCCEEEECCccEEEEeeCC--CceEEEE
Confidence 4799999999999996554444 7755554
No 141
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=76.13 E-value=1.4 Score=32.79 Aligned_cols=20 Identities=15% Similarity=0.336 Sum_probs=17.5
Q ss_pred EEeecCCcEEEEccCceeEE
Q 039148 5 IMVLKKGDVFVFLVGLVHFK 24 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~ 24 (82)
.-.|++||.|.+|.|.+|-.
T Consensus 241 ~v~l~pGd~~fipAG~~HAy 260 (394)
T 2wfp_A 241 VVKLNPGEAMFLFAETPHAY 260 (394)
T ss_dssp EEEECTTCEEEECTTCCEEE
T ss_pred EEECCCCCEEEcCCCCceEc
Confidence 35689999999999999973
No 142
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=75.09 E-value=3.2 Score=32.32 Aligned_cols=31 Identities=29% Similarity=0.440 Sum_probs=24.5
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEE
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVA 34 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~ 34 (82)
|.-.=++||.++++.|..||..|.|-.-.++
T Consensus 313 yr~iQkPGdfVit~PgtyH~Vqs~Gf~~nia 343 (510)
T 4ask_A 313 YRFVQRPGDLVWINAGTVHWVQATGWCNNIA 343 (510)
T ss_dssp EEEEECTTCEEEECTTCEEEEEESSSEEEEE
T ss_pred EEEEECCCCEEEECCCceEEEEecCeeeeeE
Confidence 4444489999999999999999999643333
No 143
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=67.69 E-value=3.5 Score=26.16 Aligned_cols=40 Identities=10% Similarity=0.204 Sum_probs=27.5
Q ss_pred EEEeecCCcEEEEc------cCceeEEEecCCcce--------EEEEeeecCCC
Q 039148 4 IIMVLKKGDVFVFL------VGLVHFKCNVGYGNV--------VAIVAFSSQNL 43 (82)
Q Consensus 4 ~~~~l~~GDv~vfP------~G~~H~~~N~G~~~a--------v~i~~~~s~np 43 (82)
|.+.+++||.+.+- ++-++|.|..+.... +.++.++..||
T Consensus 74 F~~~V~PGD~l~l~v~~~~~~~~l~F~~~~~~~~~~~~~ssG~i~l~~~~~~~~ 127 (129)
T 3esi_A 74 FQQPILPGKTLRLVLIWHAGKQSLTFSYSILEGDTERTASSGKIKLTPIMEDNP 127 (129)
T ss_dssp ECSCCCTTCEEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEEEETTC---
T ss_pred ECcccCCCCEEEEEEEEEecCCcEEEEEEeCCccceeeecCccEEEEEeCCCCC
Confidence 67888999999887 788999999875422 34455555665
No 144
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=66.81 E-value=8.7 Score=28.92 Aligned_cols=39 Identities=21% Similarity=0.133 Sum_probs=29.2
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
|+=.-..||.+.+|.|..|-..|..+.-.|+.=-++.+|
T Consensus 293 ~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~ 331 (392)
T 2ypd_A 293 CTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEH 331 (392)
T ss_dssp EEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGG
T ss_pred EEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhh
Confidence 444558999999999999999999976555544444444
No 145
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=65.84 E-value=3 Score=26.91 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=27.2
Q ss_pred eEEEeecCCcEEEEccC-ceeEEEecCCcceEEEEe
Q 039148 3 LIIMVLKKGDVFVFLVG-LVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G-~~H~~~N~G~~~av~i~~ 37 (82)
.|...+++||++.|+++ ..||-.=.|+...+=.+.
T Consensus 3 ~~~~~~~pGDlv~~~~~~~~H~gIYvG~g~viH~~~ 38 (137)
T 4dpz_X 3 LARPRPRLGDLIEISRFGYAHWAIYVGDGYVVHLAP 38 (137)
T ss_dssp CCCCCCCTTCEEEEECSSSEEEEEEEETTEEEEEEE
T ss_pred cccccCCCCCEEEEeCCCCCEEEEEeCCCeEEeccC
Confidence 36678999999988754 579999999986655543
No 146
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=65.02 E-value=22 Score=23.43 Aligned_cols=36 Identities=6% Similarity=-0.142 Sum_probs=27.6
Q ss_pred EEEeec---CCcEEEEccCceeEEEecCCcceEEEEeee
Q 039148 4 IIMVLK---KGDVFVFLVGLVHFKCNVGYGNVVAIVAFS 39 (82)
Q Consensus 4 ~~~~l~---~GDv~vfP~G~~H~~~N~G~~~av~i~~~~ 39 (82)
..-.|. ....+.+|+|+.|=.+|.++++++++..-+
T Consensus 103 ~~v~Ls~~~n~~~L~IP~G~aHgf~~lsd~~av~ly~~s 141 (174)
T 3ejk_A 103 AQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTD 141 (174)
T ss_dssp EEEEEETTTBCEEEEECTTCEEEEEECTTSCEEEEEEES
T ss_pred EEEEECCccCceEEEeCCCcEEEEEEccCCCEEEEEECC
Confidence 344555 567899999999999999997777665544
No 147
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=63.71 E-value=3.7 Score=30.99 Aligned_cols=21 Identities=19% Similarity=0.150 Sum_probs=17.9
Q ss_pred EEeecCCcEEEEccCceeEEE
Q 039148 5 IMVLKKGDVFVFLVGLVHFKC 25 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~ 25 (82)
.-+|++||.|.+|+|.+|-..
T Consensus 267 ~v~L~pGea~flpAg~~HAYl 287 (440)
T 1pmi_A 267 HVGLNKGEAMFLQAKDPHAYI 287 (440)
T ss_dssp EEEECTTCEEEECTTCCEEEE
T ss_pred eEecCCCCEEecCCCCccccC
Confidence 356899999999999999644
No 148
>1tc3_C Protein (TC3 transposase); DNA binding, helix-turn-helix, TC1/mariner family, complex (transposase/DNA), DNA binding protein/DNA complex; HET: DNA; 2.45A {Caenorhabditis elegans} SCOP: a.4.1.2
Probab=62.78 E-value=11 Score=17.88 Aligned_cols=24 Identities=0% Similarity=0.163 Sum_probs=20.0
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
+++..-+|+.++++..+|.+....
T Consensus 21 g~s~~~IA~~lgis~~Tv~~~~~~ 44 (51)
T 1tc3_C 21 NVSLHEMSRKISRSRHCIRVYLKD 44 (51)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHHC
T ss_pred CCCHHHHHHHHCcCHHHHHHHHhh
Confidence 388888999999999999886543
No 149
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=62.76 E-value=9 Score=25.77 Aligned_cols=32 Identities=22% Similarity=0.194 Sum_probs=23.0
Q ss_pred eecCCcEEEEccCceeEEEecCC-cceEEEEeee
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGY-GNVVAIVAFS 39 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~-~~av~i~~~~ 39 (82)
.-++||+++||.-+.|...=... ++-+.| +||
T Consensus 172 ~P~~G~lvlFpS~l~H~V~p~~~~~~RiSI-sFN 204 (216)
T 2rg4_A 172 APKVGDVLLWESWLRHEVPMNMAEEDRISV-SFN 204 (216)
T ss_dssp CCCTTEEEEEETTSCEEECCCCSSSCEEEE-EEE
T ss_pred cCCCCeEEEECCCCEEeccCCCCCCCEEEE-EEE
Confidence 45899999999999999876543 444444 444
No 150
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=62.21 E-value=4.9 Score=25.97 Aligned_cols=34 Identities=29% Similarity=0.298 Sum_probs=25.1
Q ss_pred eEEEeecCCcEEEEcc-CceeEEEecCCcceEEEE
Q 039148 3 LIIMVLKKGDVFVFLV-GLVHFKCNVGYGNVVAIV 36 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~-G~~H~~~N~G~~~av~i~ 36 (82)
.+.+.+++||++.|++ +..||-.=.|+...+=.+
T Consensus 3 ~~~~~~~pGDlv~~~~~~~~H~gIYvG~g~viH~~ 37 (140)
T 4dot_A 3 APIPEPKPGDLIEIFRPFYRHWAIYVGDGYVVHLA 37 (140)
T ss_dssp ---CCCCTTCEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred ccccCCCCCCEEEEeCCCCCEEEEEeCCCeEEecC
Confidence 3567899999998885 568999999988665544
No 151
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=61.97 E-value=11 Score=22.98 Aligned_cols=33 Identities=21% Similarity=0.238 Sum_probs=26.6
Q ss_pred EeecCCcEEEEccCc-eeEEEecCCcceEEEEee
Q 039148 6 MVLKKGDVFVFLVGL-VHFKCNVGYGNVVAIVAF 38 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~-~H~~~N~G~~~av~i~~~ 38 (82)
+..++||++.+|++. .||-.=.|+...+=++.-
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg~ViH~~~~ 39 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDGYVIHLAPP 39 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETTEEEEEECS
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCCeEEEEccc
Confidence 467899999998765 899999999877766543
No 152
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=58.48 E-value=18 Score=24.38 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=31.8
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcc
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGV 45 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~ 45 (82)
...++|+.++|=--..|+-.|.+++ ..++..+|--.|..
T Consensus 148 ~~w~eGe~~~fDds~~Hev~N~~d~-~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 148 KTWEEGKVLIFDDSFEHEVWQDASS-FRLIFIVDVWHPEL 186 (197)
T ss_dssp ECCCBTCEEEECTTSCEEEEECSSS-CEEEEEEEEECTTS
T ss_pred EEeeCCcEEEEcCCeEEEEEECCCC-CEEEEEEeeeCCCC
Confidence 4678999999999999999999987 45666777666643
No 153
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.14 E-value=4.7 Score=24.24 Aligned_cols=30 Identities=20% Similarity=0.373 Sum_probs=25.4
Q ss_pred eccccccCCCCCcHHHHHHHhCCCHHHHHHHHh
Q 039148 48 IANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 48 ~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
|..++|-. +++|+|.+-|+++.-.++||..
T Consensus 45 IDG~lL~~---L~ee~L~edf~ls~Lq~kKi~~ 74 (84)
T 2dkz_A 45 IDGNLLVQ---LTEEILSEDFKLSKLQVKKIMQ 74 (84)
T ss_dssp CCHHHHHH---CCHHHHHHTSCCCHHHHHHHHH
T ss_pred cchHHHHh---CCHHHHHhhcCCCHHHHHHHHH
Confidence 45677776 9999999999999999988863
No 154
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=54.63 E-value=26 Score=24.75 Aligned_cols=34 Identities=26% Similarity=0.249 Sum_probs=26.5
Q ss_pred eecCCcEEEEccCceeEEEecCC-cceEEEEeeecC
Q 039148 7 VLKKGDVFVFLVGLVHFKCNVGY-GNVVAIVAFSSQ 41 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~G~-~~av~i~~~~s~ 41 (82)
+|++|+-+.+|+|+-||.+=-+. +++ ++.-+++-
T Consensus 175 ~L~PGESiTl~Pg~~H~F~ae~g~G~v-ligEVSt~ 209 (246)
T 3kmh_A 175 RLSPGESICLPPGLYHSFWAEAGFGDV-LVGEVSSV 209 (246)
T ss_dssp EECTTCEEEECTTEEEEEEECTTSCCE-EEEEEEEC
T ss_pred EECCCCeEecCCCCEEEEEecCCCccE-EEEEcccC
Confidence 68999999999999999988765 344 55555543
No 155
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=54.13 E-value=21 Score=26.40 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=26.1
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
++.-.=++||.++.-.|.-||-+|.|-.=+.++
T Consensus 261 v~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAv 293 (354)
T 3dxt_A 261 FNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAI 293 (354)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred eEEEEeCCCcEEEECCCceEEEeeccccHhHhh
Confidence 445556899999999999999999996544443
No 156
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=52.88 E-value=24 Score=23.90 Aligned_cols=33 Identities=9% Similarity=-0.103 Sum_probs=25.6
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEEEeeec
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS 40 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s 40 (82)
.++.+||.+..|.|..|-.+- .+.++++..+..
T Consensus 79 ~~~~~Gd~~~~P~g~~H~p~a--~~gc~~~vk~~~ 111 (223)
T 3o14_A 79 GDYPAGTYVRNPPTTSHVPGS--AEGCTIFVKLWQ 111 (223)
T ss_dssp EEEETTEEEEECTTCEECCEE--SSCEEEEEEESC
T ss_pred eEECCCeEEEeCCCCccccEe--CCCCEEEEEecC
Confidence 578999999999999998775 444666666653
No 157
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=51.67 E-value=24 Score=26.29 Aligned_cols=33 Identities=12% Similarity=0.124 Sum_probs=26.4
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
+++-+=++||.++.-.|.-||-+|.|-.=+.++
T Consensus 279 v~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAv 311 (381)
T 2ox0_A 279 FDKVTQEAGEFMITFPYGYHAGFNHGFNCAEST 311 (381)
T ss_dssp CEEEEECTTCEEEECTTCEEEEEECSSEEEEEE
T ss_pred eEEEEecCCCEEEECCCcEEEeecCcccHHHHh
Confidence 455566899999999999999999996544444
No 158
>2l7y_A Putative endo-beta-N-acetylglucosaminidase; putative surface protein, structural protein; NMR {Streptococcus pneumoniae}
Probab=49.81 E-value=12 Score=22.83 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=31.1
Q ss_pred ecCCcEEEEccCceeEEEecCCcceE-------EEEeeecCCCcceeec
Q 039148 8 LKKGDVFVFLVGLVHFKCNVGYGNVV-------AIVAFSSQNLGVVTIA 49 (82)
Q Consensus 8 l~~GDv~vfP~G~~H~~~N~G~~~av-------~i~~~~s~npg~~~~~ 49 (82)
...||-+=.--|.+--.|.+|.+..+ .|+.|||+.+|.|.+.
T Consensus 19 Y~vGE~LDltGl~v~~~YsDgt~~~~~lt~~~v~VsGfDs~~~G~QtlT 67 (98)
T 2l7y_A 19 YLVGDSLDLSEGRFAVAYSNDTMEEHSFTDEGVEISGYDAQKTGRQTLT 67 (98)
T ss_dssp EETTTCCCCCSCEEEEEETTSCEEEEESCCTTSEEESCCTTSCSSEEEE
T ss_pred EecCCccccCCCEEEEEEcCCCEEEEecccCCcEEEccCCCCCCcEEEE
Confidence 45555554555566778888876554 8999999999998775
No 159
>1zs4_A Regulatory protein CII; helix-turn-helix, transcription activator, transcription-DNA; HET: DNA; 1.70A {Enterobacteria phage lambda} SCOP: a.35.1.9
Probab=46.80 E-value=14 Score=21.96 Aligned_cols=23 Identities=17% Similarity=0.250 Sum_probs=19.1
Q ss_pred CcHHHHHHHhCCCHHHHHHHHhc
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
....-+|++.|+|+.+|.++|..
T Consensus 25 ~gQ~~vAe~~GvdeStISR~k~~ 47 (83)
T 1zs4_A 25 LGTEKTAEAVGVDKSQISRWKRD 47 (83)
T ss_dssp HCHHHHHHHHTSCHHHHHHHHHH
T ss_pred HhhHHHHHHhCCCHHHHhhhhhh
Confidence 34567899999999999998753
No 160
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=46.55 E-value=31 Score=25.72 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=24.6
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEE
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVA 34 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~ 34 (82)
++.-.=++||.++.=.|.-||-+|.|-.=+.+
T Consensus 304 v~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEA 335 (373)
T 3opt_A 304 CNEIVHHEGEFMITYPYGYHAGFNYGYNLAES 335 (373)
T ss_dssp CEEEEECTTCEEEECTTCCEEEEESSSEEEEE
T ss_pred eEEEEECCCCEEEECCCceEEEEecCccHHHH
Confidence 34455589999998889999999999654433
No 161
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=44.59 E-value=22 Score=25.50 Aligned_cols=63 Identities=8% Similarity=0.115 Sum_probs=40.6
Q ss_pred EEeecCCcEEEEccCceeEEEecCCcceEEEEeeec---CC--Ccceeecccc--------ccCCCCCcHHHHHHHh
Q 039148 5 IMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSS---QN--LGVVTIANTA--------FGSNPAIVTDMLAKAF 68 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s---~n--pg~~~~~~~~--------F~~~p~~~~~vLa~af 68 (82)
..++++|++..|=....|+-.|.|+++-|- ..+|- .+ +..+...... ....|.++++.+++-.
T Consensus 141 ~~~m~~GE~w~~d~~~~H~v~N~g~~~RIh-Lv~D~~~~~~~wl~~lf~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 216 (290)
T 1e5r_A 141 VIHMRPGEIWFLDAATVHSAVNFSEISRQS-LCVDFAFDGPFDEKEIFADATLYAPGSTPDLPERRPFTAEHRRRIL 216 (290)
T ss_dssp EECCCTTEEEECCTTSCEEEEESSSSCCCE-EEEEEBCSSCCCGGGGBSSGGGBCTTCCCCCCCCEECCHHHHHHHH
T ss_pred EEecCCCCEEEEcCCCeeEEEcCCCCCeEE-EEEEecccCCcCHHHHHhhcccCCcccCcccccCCCCCHHHHHHHH
Confidence 356799999999999999999999875433 33554 22 2222211111 3345678888887743
No 162
>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A
Probab=43.12 E-value=22 Score=23.48 Aligned_cols=23 Identities=26% Similarity=0.362 Sum_probs=20.0
Q ss_pred CCCCcHHHHHHHhCCCHHHHHHH
Q 039148 56 NPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 56 ~p~~~~~vLa~af~~d~~~i~kl 78 (82)
+|.+..+=|++.|++++++||+=
T Consensus 24 ~~~~~~~~la~~~~vs~~TiRrD 46 (190)
T 4a0z_A 24 NPFITDHELSDLFQVSIQTIRLD 46 (190)
T ss_dssp CTTCCHHHHHHHHTSCHHHHHHH
T ss_pred CCCEeHHHHHHHHCCCHHHHHHH
Confidence 45688999999999999999873
No 163
>1yud_A Hypothetical protein SO0799; SOR12, Q8E1N8, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.70A {Shewanella oneidensis} SCOP: b.82.1.16
Probab=42.87 E-value=34 Score=22.68 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=38.2
Q ss_pred ecCCcE--EEEccCceeEEEec-CCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHHHhCCCHHHHHHHH
Q 039148 8 LKKGDV--FVFLVGLVHFKCNV-GYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 8 l~~GDv--~vfP~G~~H~~~N~-G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~af~~d~~~i~kl~ 79 (82)
+.+|++ +++|+|.-+...+. | +-+.+-+. =.||...-...+ .+.+-|.+.|---.++|++|-
T Consensus 101 v~~Ge~pQ~vVP~G~wqaa~~~~g-~~~LV~C~---VaPGF~f~dfel------~~~~~L~~~~P~~~~~I~~lt 165 (170)
T 1yud_A 101 LAAGERPQFLVPKGCIFGSAMNQD-GFSLVGCM---VSPGFTFDDFEL------FSQEALLAMYPQHKAVVQKLS 165 (170)
T ss_dssp TTTTEESCEEECTTCEEEEEESSS-SEEEEEEE---ESSCCCGGGCCB------CBHHHHHHSCCTTHHHHTTSC
T ss_pred cccCceeEEEECCCCEEEEEECCC-CcEEEEEE---ECCCccCCceEE------cCHHHHHhHCchhHHHHHHhh
Confidence 678999 99999999999988 5 43322222 245554333322 334556666665567777664
No 164
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=39.96 E-value=15 Score=26.14 Aligned_cols=19 Identities=26% Similarity=0.316 Sum_probs=15.9
Q ss_pred EeecCCcEEEEccCceeEEE
Q 039148 6 MVLKKGDVFVFLVGLVHFKC 25 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~ 25 (82)
-.++-||++++|+|. |=+-
T Consensus 214 ~~V~~~d~VlvP~Gy-Hp~~ 232 (270)
T 2qjv_A 214 MAVYNRDVVXVPXGY-HPVA 232 (270)
T ss_dssp EEEETTCEEEESSSB-CCEE
T ss_pred EEEECCCEEecCCCc-CCCc
Confidence 467899999999999 9643
No 165
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=39.63 E-value=23 Score=20.23 Aligned_cols=20 Identities=0% Similarity=0.311 Sum_probs=17.6
Q ss_pred CcHHHHHHHhCCCHHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl 78 (82)
+..+-|++.|++++.+|++.
T Consensus 17 vsv~eLa~~l~VS~~TIRrd 36 (78)
T 1xn7_A 17 MEAAQISQTLNTPQPMINAM 36 (78)
T ss_dssp BCHHHHHHHTTCCHHHHHHH
T ss_pred CcHHHHHHHHCcCHHHHHHH
Confidence 67788999999999999874
No 166
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=39.16 E-value=41 Score=25.25 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=22.6
Q ss_pred EeecCCcEEEEccCceeEEEecC----CcceEEEEee
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVG----YGNVVAIVAF 38 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G----~~~av~i~~~ 38 (82)
..|++||++.+|.+ ..+..... .+.+.++.++
T Consensus 402 ~~l~~G~~~fvpa~-~~~~i~g~~~~~~~~~~~~~a~ 437 (440)
T 1pmi_A 402 QKIDTGYVFFVAPG-SSIELTADSANQDQDFTTYRAF 437 (440)
T ss_dssp EEEETTCEEEECTT-CCEEEEECSSCCSSCCEEEEEE
T ss_pred EEeccCCEEEEeCC-CcEEEEEecccCCCcEEEEEEE
Confidence 37999999999999 55555432 4557666654
No 167
>2vec_A YHAK, pirin-like protein YHAK; ROS, bicupin, sulfenic acid, reactive cysteine, cytosolic protein; 1.85A {Escherichia coli}
Probab=38.99 E-value=56 Score=22.67 Aligned_cols=32 Identities=9% Similarity=0.159 Sum_probs=24.5
Q ss_pred EeecCCcEEEEc--cCceeEEEecCC-cceEEEEe
Q 039148 6 MVLKKGDVFVFL--VGLVHFKCNVGY-GNVVAIVA 37 (82)
Q Consensus 6 ~~l~~GDv~vfP--~G~~H~~~N~G~-~~av~i~~ 37 (82)
.++++|||-... +|+.|=.+|... +++..+-.
T Consensus 106 ~~i~~GdvQ~MtAG~GI~HsE~n~~~~~~l~~lQl 140 (256)
T 2vec_A 106 VQASAGEALLLSTQPGVSYSEHNLSKDKPLTRMQL 140 (256)
T ss_dssp EEEETTEEEEECCCTTCCEEEEECCSSSCEEEEEE
T ss_pred EEECCCeEEEEECCCCeEEEEEECCCCceEEEEEE
Confidence 679999999995 568999999754 56554443
No 168
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=38.11 E-value=19 Score=21.24 Aligned_cols=20 Identities=10% Similarity=0.326 Sum_probs=17.6
Q ss_pred CcHHHHHHHhCCCHHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl 78 (82)
+..+-|++.|++++.+|++.
T Consensus 17 vsv~eLA~~l~VS~~TIRrD 36 (87)
T 2k02_A 17 MEAKQLSARLQTPQPLIDAM 36 (87)
T ss_dssp EEHHHHHHHTTCCHHHHHHH
T ss_pred CcHHHHHHHHCcCHHHHHHH
Confidence 67778999999999999875
No 169
>2kvv_A Putative excisionase; DNA binding, WHTH motif, structural genomics, N structural genomics consortium (NESG), PSI-2; NMR {Klebsiella pneumoniae}
Probab=34.83 E-value=33 Score=20.12 Aligned_cols=22 Identities=9% Similarity=0.131 Sum_probs=19.9
Q ss_pred CcHHHHHHHhCCCHHHHHHHHh
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+..++|.+.+|+++.+|++-+.
T Consensus 11 V~e~~l~a~tGLs~~tIkryR~ 32 (78)
T 2kvv_A 11 MVEKALMVRTGLGARQIESYRQ 32 (78)
T ss_dssp ECHHHHHHHHCCCHHHHHHHHT
T ss_pred hCHHHHHHHHCCCHHHHHHHHh
Confidence 6789999999999999999875
No 170
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=33.58 E-value=1.1e+02 Score=20.51 Aligned_cols=42 Identities=7% Similarity=-0.098 Sum_probs=28.1
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcc
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGV 45 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~ 45 (82)
..-.|..+..+.+|+|+.|=.++..+.-.+.+.+-+-=+|..
T Consensus 109 ~~v~Ls~~~~L~IP~G~aHgf~~lsd~a~~~y~~s~~Y~p~~ 150 (197)
T 1nxm_A 109 YQTVIDASKSIFVPRGVANGFQVLSDFVAYSYLVNDYWALEL 150 (197)
T ss_dssp EEEEECTTEEEEECTTEEEEEEECSSEEEEEEEESSCCCGGG
T ss_pred EEEEeCCCcEEEeCCCeEEEEEeccCCeEEEEECCCccChhh
Confidence 345566788999999999999999877333333322234443
No 171
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=32.53 E-value=67 Score=21.17 Aligned_cols=26 Identities=8% Similarity=-0.105 Sum_probs=21.3
Q ss_pred CcEEEEccCceeEEEecCCcceEEEEe
Q 039148 11 GDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 11 GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
+..+.+|+|+.|=.++.++. ++++..
T Consensus 110 ~~~L~IP~G~aHgf~~lsd~-a~~~y~ 135 (184)
T 2ixk_A 110 KRQMWIPAGFAHGFVVLSEY-AEFLYK 135 (184)
T ss_dssp CCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCEEEeCCCeEEEEEEcCCC-EEEEEe
Confidence 68899999999999999988 544433
No 172
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=31.60 E-value=1.2e+02 Score=20.45 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=24.6
Q ss_pred EEEeec--CCcEEEEccCceeEEEecCCcceEEEEe
Q 039148 4 IIMVLK--KGDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 4 ~~~~l~--~GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
..-.|. .+..+.+|+|+.|=.++.++.-.+.+-+
T Consensus 123 ~~~~Ls~~n~~~L~IP~G~aHGF~~Lsd~a~~~Y~~ 158 (205)
T 3ryk_A 123 RGYILSADNHRQLLVPKGFAHGFCTLVPHTIVMYKV 158 (205)
T ss_dssp EEEEEETTTCCEEEECTTEEEEEEECSSSEEEEEEE
T ss_pred EEEEecCCCCCEEEeCCCceEEEEEcCCCEEEEEEc
Confidence 344564 3789999999999999999763333333
No 173
>2v79_A DNA replication protein DNAD; primosome, DNA-binding protein; HET: DNA; 2.00A {Bacillus subtilis}
Probab=31.11 E-value=40 Score=21.01 Aligned_cols=23 Identities=4% Similarity=-0.051 Sum_probs=18.7
Q ss_pred CCCCcHHHHHHHhCCCHHHHHHH
Q 039148 56 NPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 56 ~p~~~~~vLa~af~~d~~~i~kl 78 (82)
++..+.+.||+.++++...|.++
T Consensus 49 ~~~ps~~~LA~~~~~s~~~v~~~ 71 (135)
T 2v79_A 49 SYFPTPNQLQEGMSISVEECTNR 71 (135)
T ss_dssp CCSCCHHHHHTTSSSCHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCHHHHHHH
Confidence 45578999999999999776654
No 174
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=30.66 E-value=14 Score=23.04 Aligned_cols=13 Identities=38% Similarity=0.498 Sum_probs=10.7
Q ss_pred EeecCCcEEEEcc
Q 039148 6 MVLKKGDVFVFLV 18 (82)
Q Consensus 6 ~~l~~GDv~vfP~ 18 (82)
+.|+.||+++|-.
T Consensus 90 ~~L~~GD~~~F~~ 102 (130)
T 1wid_A 90 KNLRAGDVVSFSR 102 (130)
T ss_dssp TTCCTTCEEEEEE
T ss_pred cCCCCCCEEEEEE
Confidence 5689999999854
No 175
>1njh_A Protein YOJF; structural genomics, PSI, protein structure initiative center for structural genomics, MCSG, unknown function; 1.70A {Bacillus subtilis} SCOP: b.128.1.1
Probab=29.70 E-value=40 Score=21.35 Aligned_cols=37 Identities=11% Similarity=0.213 Sum_probs=27.5
Q ss_pred EEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCC
Q 039148 4 IIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
|+-.|+-.+-.|.-+|+.||..+... ..+++.+|.+.
T Consensus 68 yRvGLk~~~GWvYaeGLTh~e~d~~g--rLLlAGhd~~G 104 (119)
T 1njh_A 68 YRVGLKTEEGWIYAEGLTEYTVDEEN--RLLMAGHLPGG 104 (119)
T ss_dssp EEEEEEESSSEEEEEEECEEEECTTC--CEEEEEEETTT
T ss_pred cEEEEEcCCCEEEEccceeeEEcCCC--cEEEcccCCCC
Confidence 55566666778889999999998643 45778888654
No 176
>1a9x_A Carbamoyl phosphate synthetase (large chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: a.92.1.1 c.24.1.1 c.30.1.1 c.30.1.1 d.142.1.2 d.142.1.2 PDB: 1ce8_A* 1m6v_A* 1c30_A* 1bxr_A* 1c3o_A* 1cs0_A* 1jdb_B* 1kee_A* 1t36_A*
Probab=29.43 E-value=40 Score=27.71 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=20.9
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
||+|..||+..+.+++.|+++|.+
T Consensus 496 gf~d~~ia~~~~~~~~~~~~~r~~ 519 (1073)
T 1a9x_A 496 GFADARLAKLAGVREAEIRKLRDQ 519 (1073)
T ss_dssp TCCHHHHHHHTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHhCCCHHHHHHHHHH
Confidence 488999999999999999999864
No 177
>1jko_C HIN recombinase, DNA-invertase HIN; water-mediated recognition, protein-DNA complex, A10G mutant, DNA binding protein/DNA complex; 2.24A {Synthetic} SCOP: a.4.1.2 PDB: 1ijw_C* 1jj6_C* 1jj8_C* 1hcr_A 1jkp_C 1jkq_C 1jkr_C
Probab=28.69 E-value=54 Score=15.52 Aligned_cols=21 Identities=14% Similarity=0.003 Sum_probs=17.9
Q ss_pred CcHHHHHHHhCCCHHHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~ 79 (82)
.+..-+|+.++++..+|.+..
T Consensus 22 ~s~~~ia~~lgvs~~Tv~r~l 42 (52)
T 1jko_C 22 HPRQQLAIIFGIGVSTLYRYF 42 (52)
T ss_dssp CCHHHHHHTTSCCHHHHHHHS
T ss_pred CCHHHHHHHHCCCHHHHHHHH
Confidence 778889999999999987753
No 178
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=28.67 E-value=63 Score=19.42 Aligned_cols=29 Identities=21% Similarity=0.279 Sum_probs=19.5
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVA 34 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~ 34 (82)
..++.||.++|++|..-.....+.+.-++
T Consensus 57 ~~VkvGD~Vlf~k~y~Gtevk~dgeey~i 85 (97)
T 1pcq_O 57 LDVKVGDIVIFNDGYGVKSEKIDNEEVLI 85 (97)
T ss_dssp CSCCTTCEEEECCCSSCEEEEETTEEEEE
T ss_pred cccCCCCEEEECCccCCeEEEECCEEEEE
Confidence 45899999999996655555555544433
No 179
>1tq5_A Protein YHHW; bicupin, pirin, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics, unknown function; 1.76A {Escherichia coli} SCOP: b.82.1.12
Probab=28.66 E-value=1e+02 Score=21.02 Aligned_cols=32 Identities=13% Similarity=0.120 Sum_probs=24.1
Q ss_pred EeecCCcEEEE--ccCceeEEEecCC-cceEEEEe
Q 039148 6 MVLKKGDVFVF--LVGLVHFKCNVGY-GNVVAIVA 37 (82)
Q Consensus 6 ~~l~~GDv~vf--P~G~~H~~~N~G~-~~av~i~~ 37 (82)
.++++|||-.. =+|++|=.+|... ++...+-.
T Consensus 83 ~~i~~GdvQ~MtAG~GI~HsE~~~~~~~~l~~lQl 117 (242)
T 1tq5_A 83 EQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQI 117 (242)
T ss_dssp EEEETTCEEEEECTTCEEEEEECCCSSCCEEEEEE
T ss_pred EEECCCcEEEEECCCCcEEEEEcCCCCCeEEEEEE
Confidence 67999999999 4569999999763 55544433
No 180
>2o8x_A Probable RNA polymerase sigma-C factor; promoter recognition, transcription regulation, helix-turn-H motif, transcription; 3.00A {Mycobacterium tuberculosis}
Probab=28.24 E-value=66 Score=16.47 Aligned_cols=21 Identities=5% Similarity=-0.083 Sum_probs=18.6
Q ss_pred CcHHHHHHHhCCCHHHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~ 79 (82)
++.+=+|+.++++..+|++..
T Consensus 32 ~s~~eIA~~lgis~~tv~~~~ 52 (70)
T 2o8x_A 32 LSYADAAAVCGCPVGTIRSRV 52 (70)
T ss_dssp CCHHHHHHHHTSCHHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHH
Confidence 899999999999999888754
No 181
>2xi8_A Putative transcription regulator; HTH DNA-binding motif; HET: GOL; 1.21A {Enterococcus faecalis} PDB: 2gzu_A 1utx_A* 2xj3_A 2xiu_A
Probab=28.00 E-value=63 Score=16.08 Aligned_cols=23 Identities=13% Similarity=0.316 Sum_probs=18.7
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+++.+-||+..+++..++.++.+
T Consensus 14 g~s~~~lA~~~gis~~~i~~~e~ 36 (66)
T 2xi8_A 14 KISQSELAALLEVSRQTINGIEK 36 (66)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 37788899999999998887653
No 182
>2k9q_A Uncharacterized protein; all helix, helix-turn-helix, plasmid, structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=27.92 E-value=73 Score=16.80 Aligned_cols=22 Identities=5% Similarity=0.231 Sum_probs=18.2
Q ss_pred CcHHHHHHHhCCCHHHHHHHHh
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+..+-||+..+++...+.++.+
T Consensus 16 lsq~~lA~~~gis~~~i~~~e~ 37 (77)
T 2k9q_A 16 LTAKSVAEEMGISRQQLCNIEQ 37 (77)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCHHHHHHHhCCCHHHHHHHHc
Confidence 7778899999999998888753
No 183
>1r69_A Repressor protein CI; gene regulating protein; 2.00A {Phage 434} SCOP: a.35.1.2 PDB: 1pra_A 1per_L 1rpe_L* 2or1_L* 1r63_A 2r63_A 1sq8_A
Probab=27.83 E-value=65 Score=16.23 Aligned_cols=23 Identities=22% Similarity=0.343 Sum_probs=18.8
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++.+
T Consensus 14 glsq~~lA~~~gis~~~i~~~e~ 36 (69)
T 1r69_A 14 GLNQAELAQKVGTTQQSIEQLEN 36 (69)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 37788899999999998888753
No 184
>1zug_A Phage 434 CRO protein; gene regulating protein, transcription regulation; NMR {Phage 434} SCOP: a.35.1.2 PDB: 2cro_A 3cro_L*
Probab=27.72 E-value=67 Score=16.30 Aligned_cols=23 Identities=9% Similarity=0.185 Sum_probs=19.0
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++.+
T Consensus 16 glsq~~lA~~~gis~~~i~~~e~ 38 (71)
T 1zug_A 16 KMTQTELATKAGVKQQSIQLIEA 38 (71)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCHHHHHHHhCCCHHHHHHHHc
Confidence 37788899999999999888753
No 185
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=27.59 E-value=37 Score=19.31 Aligned_cols=19 Identities=21% Similarity=0.051 Sum_probs=15.6
Q ss_pred CcHHHHHHHhCCCHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQ 77 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~k 77 (82)
...+=||++|+++..+|++
T Consensus 25 psv~EIa~~lgvS~~TVrr 43 (77)
T 2jt1_A 25 VKTRDIADAAGLSIYQVRL 43 (77)
T ss_dssp EEHHHHHHHHTCCHHHHHH
T ss_pred cCHHHHHHHHCCCHHHHHH
Confidence 5567799999999988775
No 186
>1u9l_A Transcription elongation protein NUSA; escherichia coli NUSA, phage lambda protein N, regulation of RNA binding, transcription antitermination, X-RAY crystallography; 1.90A {Escherichia coli} SCOP: a.60.4.2 PDB: 1wcl_A
Probab=27.15 E-value=56 Score=18.31 Aligned_cols=19 Identities=16% Similarity=0.305 Sum_probs=14.3
Q ss_pred HHHHHHhCCCHHHHHHHHh
Q 039148 62 DMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 62 ~vLa~af~~d~~~i~kl~~ 80 (82)
+++.+..++|+.++++|..
T Consensus 6 ~~f~~~lgI~e~~a~~L~~ 24 (70)
T 1u9l_A 6 DTFTKYLDIDEDFATVLVE 24 (70)
T ss_dssp HHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHH
Confidence 4667777888888888764
No 187
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=26.55 E-value=25 Score=21.75 Aligned_cols=18 Identities=17% Similarity=0.087 Sum_probs=14.3
Q ss_pred cCC-cEEEEccCceeEEEe
Q 039148 9 KKG-DVFVFLVGLVHFKCN 26 (82)
Q Consensus 9 ~~G-Dv~vfP~G~~H~~~N 26 (82)
..| |++++|.|+..|-.+
T Consensus 21 ~~~~siiv~p~~~~~w~w~ 39 (122)
T 2ab1_A 21 TTYKDCKVWPGGSRTWDWR 39 (122)
T ss_dssp CEESEEEEETTEEEEECHH
T ss_pred EeCCCEEEECCccccCccc
Confidence 346 999999999887643
No 188
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=26.51 E-value=41 Score=24.72 Aligned_cols=21 Identities=19% Similarity=0.210 Sum_probs=17.0
Q ss_pred EeecCCcEEEEccCceeEEEe
Q 039148 6 MVLKKGDVFVFLVGLVHFKCN 26 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N 26 (82)
..|++||.+.+|.+...+...
T Consensus 362 ~~l~~G~~~fvpa~~~~~~i~ 382 (394)
T 2wfp_A 362 LVLKPGESAFIGADESPVNAS 382 (394)
T ss_dssp EEECTTCEEEECGGGCCEEEE
T ss_pred EEEccCcEEEEeCCCceEEEE
Confidence 478999999999997666654
No 189
>3anw_A GINS51, putative uncharacterized protein; SLD5 superfamily, DNA replication, replication; 2.65A {Thermococcus kodakarensis}
Probab=26.38 E-value=21 Score=23.66 Aligned_cols=13 Identities=15% Similarity=0.312 Sum_probs=11.0
Q ss_pred ecCCcEEEEccCc
Q 039148 8 LKKGDVFVFLVGL 20 (82)
Q Consensus 8 l~~GDv~vfP~G~ 20 (82)
|++|||+++|+-.
T Consensus 159 l~~~Dvv~LP~~~ 171 (188)
T 3anw_A 159 FMAGDMAIIPTVI 171 (188)
T ss_dssp BCTTCEEEEEHHH
T ss_pred CCcccEEeecHHH
Confidence 8999999999643
No 190
>1adr_A P22 C2 repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.35.1.2
Probab=26.21 E-value=74 Score=16.34 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=18.0
Q ss_pred CcHHHHHHHhCCCHHHHHHHHh
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+..+-||+..+++...+.++.+
T Consensus 19 ls~~~lA~~~gis~~~i~~~e~ 40 (76)
T 1adr_A 19 IRQAALGKMVGVSNVAISQWER 40 (76)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCHHHHHHHHCcCHHHHHHHHc
Confidence 7778899999999988887653
No 191
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=26.10 E-value=70 Score=16.00 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=17.9
Q ss_pred CcHHHHHHHhCCCHHHHHHHHh
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+..+-||+..+++...+.++.+
T Consensus 19 ~s~~~lA~~~gis~~~i~~~e~ 40 (68)
T 2r1j_L 19 IRQAALGKMVGVSNVAISQWER 40 (68)
T ss_dssp CCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCHHHHHHHHCCCHHHHHHHHc
Confidence 7777889999999988887653
No 192
>1ku3_A Sigma factor SIGA; helix-turn-helix, transcription; 1.80A {Thermus aquaticus} SCOP: a.4.13.2 PDB: 1ku7_A 1rio_H 3n97_A*
Probab=25.77 E-value=82 Score=16.68 Aligned_cols=22 Identities=9% Similarity=0.265 Sum_probs=19.2
Q ss_pred CCcHHHHHHHhCCCHHHHHHHH
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~ 79 (82)
+++.+=+|+.++++..+|++..
T Consensus 30 ~~s~~eIA~~l~is~~tV~~~~ 51 (73)
T 1ku3_A 30 EHTLEEVGAYFGVTRERIRQIE 51 (73)
T ss_dssp CCCHHHHHHHHTCCHHHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHH
Confidence 5999999999999999888754
No 193
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=25.73 E-value=1.1e+02 Score=20.12 Aligned_cols=24 Identities=8% Similarity=-0.078 Sum_probs=20.2
Q ss_pred CcEEEEccCceeEEEecCCcceEEE
Q 039148 11 GDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 11 GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
+..+.+|+|+.|=.++.++. ++++
T Consensus 109 ~~~L~IP~G~aHgf~~lsd~-a~~~ 132 (183)
T 1dzr_A 109 KRQLWIPEGFAHGFVTLSEY-AEFL 132 (183)
T ss_dssp CCEEEECTTEEEEEEECSSE-EEEE
T ss_pred CCEEEeCCCeEEEEEEcCCC-eEEE
Confidence 58899999999999999887 4443
No 194
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=25.70 E-value=31 Score=21.78 Aligned_cols=19 Identities=5% Similarity=0.190 Sum_probs=15.0
Q ss_pred ecCCcEEEEccCceeEEEe
Q 039148 8 LKKGDVFVFLVGLVHFKCN 26 (82)
Q Consensus 8 l~~GDv~vfP~G~~H~~~N 26 (82)
...|+++++|.|+..|...
T Consensus 30 ~~~gsilv~p~~~~~W~~~ 48 (135)
T 2fvt_A 30 SHQGSLLFLPDAVWGWDVT 48 (135)
T ss_dssp EECSEEEECSSCEEEESCC
T ss_pred EEEeCEEEeCCCccccCCC
Confidence 3568999999999777543
No 195
>2lm0_A AF4/FMR2 family member 1/protein AF-9 chimera; intrinsically disordered, nuclear protein; NMR {Homo sapiens}
Probab=25.68 E-value=33 Score=21.89 Aligned_cols=16 Identities=25% Similarity=0.370 Sum_probs=12.8
Q ss_pred HhCCCHHHHHHHHhcC
Q 039148 67 AFQAEKKIVKQLQNTF 82 (82)
Q Consensus 67 af~~d~~~i~kl~~~f 82 (82)
-+.+|+.+|+|||+-+
T Consensus 104 Lc~LD~~Tv~klq~~l 119 (125)
T 2lm0_A 104 LCSLDKTTVRKLQSYL 119 (125)
T ss_dssp TTTSCHHHHHHHHHHT
T ss_pred eeccCHHHHHHHHHHH
Confidence 3568999999999743
No 196
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=25.52 E-value=32 Score=21.38 Aligned_cols=19 Identities=11% Similarity=0.319 Sum_probs=15.3
Q ss_pred ecCCcEEEEccCceeEEEe
Q 039148 8 LKKGDVFVFLVGLVHFKCN 26 (82)
Q Consensus 8 l~~GDv~vfP~G~~H~~~N 26 (82)
...|+++++|.|+..|...
T Consensus 32 ~~~g~i~v~p~~~~~W~~~ 50 (128)
T 2fi9_A 32 SHRGSIICIPSGIYGIDMT 50 (128)
T ss_dssp EEESEEEEETTEEEEECCS
T ss_pred EEEeCEEEeCCCeeccCCC
Confidence 4568999999999888543
No 197
>2x48_A CAG38821; archeal virus, viral protein; 2.60A {Sulfolobus islandicus rod-shaped virusorganism_taxid}
Probab=25.50 E-value=70 Score=15.83 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=19.6
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+.+..-+|+.++++..+|.+.-.
T Consensus 31 g~s~~eIA~~lgis~~TV~~~l~ 53 (55)
T 2x48_A 31 GYTVQQIANALGVSERKVRRYLE 53 (55)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHH
Confidence 38888999999999999987643
No 198
>2b5a_A C.BCLI; helix-turn-helix motif, gene regulation; 1.54A {Bacillus caldolyticus} SCOP: a.35.1.3
Probab=25.22 E-value=79 Score=16.33 Aligned_cols=23 Identities=9% Similarity=0.229 Sum_probs=18.7
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++.+
T Consensus 23 glsq~~lA~~~gis~~~i~~~e~ 45 (77)
T 2b5a_A 23 GVSQEELADLAGLHRTYISEVER 45 (77)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCCCHHHHHHHHC
Confidence 37788899999999988887753
No 199
>3omt_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.65A {Cytophaga hutchinsonii}
Probab=25.20 E-value=80 Score=16.37 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=19.1
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..|++..++.++.+
T Consensus 21 glsq~~lA~~~gis~~~is~~e~ 43 (73)
T 3omt_A 21 GKTNLWLTETLDKNKTTVSKWCT 43 (73)
T ss_dssp TCCHHHHHHHTTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 37788899999999999888753
No 200
>1u78_A TC3 transposase, transposable element TC3 transposase; transposon DNA, bipartite DNA-binding, HTH- motif, DNA binding protein/DNA complex; 2.69A {Caenorhabditis elegans} SCOP: a.4.1.2 a.4.1.2
Probab=25.08 E-value=70 Score=18.63 Aligned_cols=23 Identities=0% Similarity=0.170 Sum_probs=19.7
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
|.+..-+|+.++++..+|.+...
T Consensus 22 G~s~~~ia~~lgis~~Tv~r~~~ 44 (141)
T 1u78_A 22 NVSLHEMSRKISRSRHCIRVYLK 44 (141)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHHHHHH
Confidence 48888999999999999988654
No 201
>1y7y_A C.AHDI; helix-turn-helix, DNA-binding protein, transcriptional regulator, transcription regulator; 1.69A {Aeromonas hydrophila} SCOP: a.35.1.3
Probab=25.08 E-value=78 Score=16.17 Aligned_cols=23 Identities=13% Similarity=0.164 Sum_probs=19.0
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++.+
T Consensus 26 g~s~~~lA~~~gis~~~i~~~e~ 48 (74)
T 1y7y_A 26 GLSQETLAFLSGLDRSYVGGVER 48 (74)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHC
Confidence 37888899999999998888753
No 202
>2vn2_A DNAD, chromosome replication initiation protein; DNA replication, primosome; 2.3A {Geobacillus kaustophilus HTA426}
Probab=24.90 E-value=70 Score=19.31 Aligned_cols=23 Identities=9% Similarity=-0.042 Sum_probs=18.8
Q ss_pred CCCCcHHHHHHHhCCCHHHHHHH
Q 039148 56 NPAIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 56 ~p~~~~~vLa~af~~d~~~i~kl 78 (82)
+|..+.+.||+.++++..+|.+.
T Consensus 49 ~~~ps~~~LA~~l~~s~~~V~~~ 71 (128)
T 2vn2_A 49 VLFPTPAELAERMTVSAAECMEM 71 (128)
T ss_dssp CSSCCHHHHHHTSSSCHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCHHHHHHH
Confidence 45578999999999999877654
No 203
>2aj7_A Hypothetical protein BH3618; BH3618-like fold, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.67A {Bacillus halodurans} SCOP: b.158.1.1
Probab=24.81 E-value=1.5e+02 Score=19.30 Aligned_cols=63 Identities=10% Similarity=0.127 Sum_probs=37.1
Q ss_pred eecCCcEEEEccCceeE------EEe--cCCcceEEEEeeecCCCcceeeccccccCC--CCCcHHHHHHHhCC
Q 039148 7 VLKKGDVFVFLVGLVHF------KCN--VGYGNVVAIVAFSSQNLGVVTIANTAFGSN--PAIVTDMLAKAFQA 70 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~------~~N--~G~~~av~i~~~~s~npg~~~~~~~~F~~~--p~~~~~vLa~af~~ 70 (82)
.+.+-+++.||.|+.-| ..- ..+.|..++-+.+..+.+...+....|..+ +.++++.++ .+++
T Consensus 25 ei~e~~ii~F~~GIpGFE~~k~F~L~~~~~~~pf~~LQS~dd~~laF~vi~P~~f~~dY~~~l~~~~~~-~L~i 97 (163)
T 2aj7_A 25 EVAEDRLIAFDQGIPAFEDEKEFVLLPFAAGTPYYTLQSTKTVDLAFIIVNPFSFFPEYRVKLPEATIA-QLNI 97 (163)
T ss_dssp EEEGGGEEECTTCBTTBTTCCEEEEEESSTTSCEEEEEESSCTTCEEEEECGGGTCTTCCCCCCHHHHH-HTTC
T ss_pred EeCccCEEEccCCCcCCccceEEEEEecCCCCcEEEEEecCCCceEEEEeCHHHhCCCCCccCCHHHHH-hcCC
Confidence 56777899999998533 222 245666666665555556555554444432 557777655 3443
No 204
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=24.63 E-value=1.1e+02 Score=20.13 Aligned_cols=26 Identities=12% Similarity=0.036 Sum_probs=21.3
Q ss_pred CcEEEEccCceeEEEecCCcceEEEEe
Q 039148 11 GDVFVFLVGLVHFKCNVGYGNVVAIVA 37 (82)
Q Consensus 11 GDv~vfP~G~~H~~~N~G~~~av~i~~ 37 (82)
+..+.+|+|+.|=.++.++. ++++-.
T Consensus 109 ~~~L~IP~G~aHgf~~lsd~-a~~~y~ 134 (185)
T 1ep0_A 109 RREFFIPEGFAHGFLALSDE-CIVNYK 134 (185)
T ss_dssp CCEEEECTTEEEEEEECSSE-EEEEEE
T ss_pred CCEEEeCCCeEEEEEEcCCC-eEEEEe
Confidence 68899999999999999988 544433
No 205
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=24.49 E-value=1.1e+02 Score=21.96 Aligned_cols=29 Identities=14% Similarity=0.076 Sum_probs=20.7
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVA 34 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~ 34 (82)
-.|++||.+.+|+|..|-..-..+.-++.
T Consensus 246 ~~L~~~DsLLIpa~~~y~~~r~~gsv~L~ 274 (286)
T 2qnk_A 246 LSLAPDDSLLVLAGTSYAWERTQGSVALS 274 (286)
T ss_dssp EEECTTEEEEECTTCCEEEEECTTCEEEE
T ss_pred EeccCCCEEEecCCCeEEEEecCCeEEEE
Confidence 46899999999999877665543433433
No 206
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=24.47 E-value=1.1e+02 Score=19.91 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=23.2
Q ss_pred cCCcEEEE---ccCceeEEEecCCcceEEEEeeecCCC
Q 039148 9 KKGDVFVF---LVGLVHFKCNVGYGNVVAIVAFSSQNL 43 (82)
Q Consensus 9 ~~GDv~vf---P~G~~H~~~N~G~~~av~i~~~~s~np 43 (82)
+.||++.| +.|-+||..|.++ +.++....+..-|
T Consensus 107 ~~g~~l~f~v~~~G~l~~~iNg~~-~g~~~~~V~~~~p 143 (168)
T 2yue_A 107 EKDNILYYYVNGAGDVIYGINNEE-KGVILTGIDTRSL 143 (168)
T ss_dssp CSSCEEEEEECTTSEEEEEESSCE-EEEEEECCCCSSC
T ss_pred cCCCEEEEEEcCCCEEEEEECCCc-cEEEEcCCCCCCc
Confidence 56888766 6899999998654 3555555665444
No 207
>1msc_A Bacteriophage MS2 coat protein; translation repressor, viral protein; 2.00A {Enterobacterio phage MS2} SCOP: d.85.1.1 PDB: 2bu1_A* 1u1y_A 1zdi_A 1zdj_A 1zdk_A 1zdh_A* 2c4q_A* 2c4y_A* 2c4z_A* 2c50_A 2c51_A 2iz8_A 2iz9_A* 2izm_A 2izn_A 2ms2_A 5msf_A 6msf_A 7msf_A 1aq3_A ...
Probab=24.36 E-value=63 Score=20.18 Aligned_cols=28 Identities=18% Similarity=0.224 Sum_probs=22.4
Q ss_pred cCCcEEEEc----cCceeEEEecCCcceEEEE
Q 039148 9 KKGDVFVFL----VGLVHFKCNVGYGNVVAIV 36 (82)
Q Consensus 9 ~~GDv~vfP----~G~~H~~~N~G~~~av~i~ 36 (82)
..|||.|.| -|+..|.-|+...+|--+.
T Consensus 14 gtg~vtv~p~~~angvaewis~nsrsqaykvt 45 (129)
T 1msc_A 14 GTGDVTVAPSNFANGVAEWISSNSRSQAYKVT 45 (129)
T ss_dssp STTCEEEEEEEEETTEEEEECSTTSSCCCEEE
T ss_pred CccceEEeeccccchHHHHhhcCcccceeEEE
Confidence 468999988 6999999999887764443
No 208
>1ywk_A 4-deoxy-L-threo-5-hexosulose-uronate ketol- isomerase 1; structural genomics, nysgxrc target T1814, PSI, protein structure initiative; 2.95A {Enterococcus faecalis} SCOP: b.82.1.13
Probab=24.27 E-value=38 Score=24.39 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=15.5
Q ss_pred EeecCCcEEEEccCceeE
Q 039148 6 MVLKKGDVFVFLVGLVHF 23 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~ 23 (82)
-.++-||++++|+|.+|=
T Consensus 232 ~~V~n~daVlvP~wgyHp 249 (289)
T 1ywk_A 232 LVMSNEQAAISPSWSIHS 249 (289)
T ss_dssp EEECTTEEEEECTTSCCC
T ss_pred EEEECCCEEEeCCCcccC
Confidence 356999999999999994
No 209
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=23.99 E-value=61 Score=17.40 Aligned_cols=21 Identities=29% Similarity=0.298 Sum_probs=17.6
Q ss_pred CCcHHHHHHHhCCCHHHHHHH
Q 039148 58 AIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl 78 (82)
+++-.-||+.++++..+|.++
T Consensus 25 ~~s~~eLA~~lglsr~tv~~~ 45 (67)
T 2heo_A 25 PVAIFQLVKKCQVPKKTLNQV 45 (67)
T ss_dssp CEEHHHHHHHHCSCHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHH
Confidence 478888999999999877664
No 210
>2p7v_B Sigma-70, RNA polymerase sigma factor RPOD; RSD, regulator of sigma 70, sigma 70 domain 4, transcription, regulation, helix-turn-helix; 2.60A {Escherichia coli} SCOP: a.4.13.2
Probab=23.75 E-value=87 Score=16.30 Aligned_cols=22 Identities=14% Similarity=0.397 Sum_probs=19.2
Q ss_pred CCcHHHHHHHhCCCHHHHHHHH
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~ 79 (82)
+++.+=+|+.++++..+|++..
T Consensus 25 g~s~~eIA~~lgis~~tV~~~~ 46 (68)
T 2p7v_B 25 DYTLEEVGKQFDVTRERIRQIE 46 (68)
T ss_dssp CCCHHHHHHHHTCCHHHHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHHHHH
Confidence 4899999999999999888754
No 211
>2ky6_A Mediator of RNA polymerase II transcription subun; ARC, VP16 binding domain, acid, transcription REGU; NMR {Homo sapiens} PDB: 2l23_A 2l6u_A 2xnf_A
Probab=23.58 E-value=29 Score=23.20 Aligned_cols=25 Identities=28% Similarity=0.405 Sum_probs=21.5
Q ss_pred cCceeEEEecCCcceEEEEeeecCC
Q 039148 18 VGLVHFKCNVGYGNVVAIVAFSSQN 42 (82)
Q Consensus 18 ~G~~H~~~N~G~~~av~i~~~~s~n 42 (82)
.|.+||-.+..|+.=+.+..+++..
T Consensus 108 aGcvhF~~~~~ceiKvLiLlYs~~k 132 (166)
T 2ky6_A 108 AGCVHFPHTAPCEVRVLMLLYSSKK 132 (166)
T ss_dssp EEEEECCTTCCCSCCEEEEEECTTT
T ss_pred eEEEECCCCCCcceEEEEEEEcCCc
Confidence 5889999899999999999997754
No 212
>2l8k_A NSP7, non-structural protein 7; viral protein; NMR {Equine arteritis virus}
Probab=23.42 E-value=35 Score=21.68 Aligned_cols=30 Identities=17% Similarity=0.154 Sum_probs=21.4
Q ss_pred EEeecCCcEEEEccCceeEE-EecCCcceEEEEe
Q 039148 5 IMVLKKGDVFVFLVGLVHFK-CNVGYGNVVAIVA 37 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~~H~~-~N~G~~~av~i~~ 37 (82)
.+.+++||++|.--+ +. .+.|++.-++...
T Consensus 74 ~~~~~~GD~VV~LG~---~d~~~vg~~~~v~~pi 104 (123)
T 2l8k_A 74 EQEVTAGDRVVVIDG---LDRMAHFKDDLVLVPL 104 (123)
T ss_dssp CCCCCTTSEEEESSC---CSSCEEEETTEEEEEE
T ss_pred ccCCCCCCEEEEecc---eeEEEeccccEEEEEE
Confidence 357899999998776 66 6667766665443
No 213
>1una_A GA unassembled coat protein dimer; unassembled virus coat protein dimer, bacteriophage, RNA- binding dimer, translational repressor; 2.80A {Enterobacteria phage GA} SCOP: d.85.1.1 PDB: 1gav_A
Probab=23.40 E-value=65 Score=20.10 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=22.3
Q ss_pred cCCcEEEEc----cCceeEEEecCCcceEEEE
Q 039148 9 KKGDVFVFL----VGLVHFKCNVGYGNVVAIV 36 (82)
Q Consensus 9 ~~GDv~vfP----~G~~H~~~N~G~~~av~i~ 36 (82)
..|||.|.| -|+..|.-|+...+|--+.
T Consensus 13 gtg~vtv~p~~~angvaewis~nsrsqaykvt 44 (129)
T 1una_A 13 GTGNVTVVPVSNANGVAEWLSNNSRSQAYRVT 44 (129)
T ss_dssp SSSCEEEEEEECGGGCEEEEESSCGGGCCEEE
T ss_pred CccceEEeeccccchHHHHhhcCcccceeEEE
Confidence 468999998 6999999999877764443
No 214
>3mxn_A RECQ-mediated genome instability protein 1; bloom syndrome, helicase, RMI, topoisomerase, replication PR replication; 1.55A {Homo sapiens} PDB: 4day_A 3nbh_A
Probab=23.36 E-value=55 Score=21.55 Aligned_cols=23 Identities=17% Similarity=0.196 Sum_probs=20.4
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
.|++++|.+-.|.+...++++|+
T Consensus 76 ~f~~~VLt~lIGfS~~E~~~lkk 98 (157)
T 3mxn_A 76 DFVDEILTSLIGFSVPEMKQSKK 98 (157)
T ss_dssp EECHHHHHHHHSCCHHHHHHHTT
T ss_pred EeeHHHHHhhhCCCHHHHHHHhh
Confidence 38999999999999999988874
No 215
>3b7h_A Prophage LP1 protein 11; structural genomics, PSI2, MCSG, protein structure initiative, midwest center for structural genomics; 2.00A {Lactobacillus plantarum WCFS1}
Probab=23.34 E-value=88 Score=16.18 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=18.7
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++-+
T Consensus 20 g~sq~~lA~~~gis~~~i~~~e~ 42 (78)
T 3b7h_A 20 NLTINRVATLAGLNQSTVNAMFE 42 (78)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHC
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 37788899999999998888753
No 216
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=23.31 E-value=1.7e+02 Score=19.49 Aligned_cols=29 Identities=14% Similarity=0.007 Sum_probs=22.3
Q ss_pred EEeec--CCcEEEEccCceeEEEecCCcceE
Q 039148 5 IMVLK--KGDVFVFLVGLVHFKCNVGYGNVV 33 (82)
Q Consensus 5 ~~~l~--~GDv~vfP~G~~H~~~N~G~~~av 33 (82)
.-.|. .+..+.+|+|+.|=.+|.++.-.+
T Consensus 119 ~v~Ls~en~~~L~IP~G~aHgf~~lsd~a~~ 149 (196)
T 1wlt_A 119 KAELNEENHYMLWIPPGFAHGFQALEDSIVI 149 (196)
T ss_dssp EEEEETTTCCEEEECTTEEEEEEESSSEEEE
T ss_pred EEEecCCCCCEEEeCCCeEEEEEEcCCCeEE
Confidence 33454 468999999999999999885333
No 217
>2a6c_A Helix-turn-helix motif; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: CIT; 1.90A {Nitrosomonas europaea} SCOP: a.35.1.13
Probab=23.11 E-value=98 Score=16.69 Aligned_cols=23 Identities=13% Similarity=0.086 Sum_probs=19.6
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++.+
T Consensus 31 glsq~elA~~~gis~~~is~~e~ 53 (83)
T 2a6c_A 31 GLTQFKAAELLGVTQPRVSDLMR 53 (83)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 48888999999999999988753
No 218
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=22.82 E-value=32 Score=20.17 Aligned_cols=23 Identities=48% Similarity=0.678 Sum_probs=15.3
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
++++.||.++ |.|+.+.-..+-+
T Consensus 17 ~~f~vGD~L~-------F~y~~~~hsV~~v 39 (91)
T 1f56_A 17 KSFRAGDVLV-------FKYIKGQHNVVAV 39 (91)
T ss_dssp CCBCTTCEEE-------EECCBTTBCEEEE
T ss_pred ccEeCCCEEE-------EEccCCCCeEEEE
Confidence 6789999886 5666655444444
No 219
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=22.80 E-value=1.5e+02 Score=20.28 Aligned_cols=25 Identities=12% Similarity=0.002 Sum_probs=20.5
Q ss_pred CcEEEEccCceeEEEecCCcceEEEE
Q 039148 11 GDVFVFLVGLVHFKCNVGYGNVVAIV 36 (82)
Q Consensus 11 GDv~vfP~G~~H~~~N~G~~~av~i~ 36 (82)
+..+.+|+|+.|=.+|.++. ++++-
T Consensus 128 ~~~L~IP~G~aHgF~~Lsd~-a~vly 152 (225)
T 1upi_A 128 RRTIYVSEGLAHGFLALQDN-STVMY 152 (225)
T ss_dssp CCEEEECTTCEEEEEECSSS-EEEEE
T ss_pred CcEEEeCCCeeEEEEEcCCC-EEEEE
Confidence 57899999999999999987 44333
No 220
>2kpj_A SOS-response transcriptional repressor, LEXA; NESG, GFT, structural genomics, PSI-2, protein structure initiative; NMR {Eubacterium rectale atcc 33656}
Probab=22.64 E-value=96 Score=17.08 Aligned_cols=23 Identities=9% Similarity=0.011 Sum_probs=19.2
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++..++.++.+
T Consensus 22 glsq~~lA~~~gis~~~is~~e~ 44 (94)
T 2kpj_A 22 EKTQLEIAKSIGVSPQTFNTWCK 44 (94)
T ss_dssp SSCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHh
Confidence 47888899999999999888753
No 221
>1pdn_C Protein (PRD paired); protein-DNA complex, double helix, PAX, paired domain, DNA-binding protein, gene regulation/DNA complex; HET: DNA; 2.50A {Drosophila melanogaster} SCOP: a.4.1.5
Probab=22.62 E-value=64 Score=18.25 Aligned_cols=23 Identities=13% Similarity=0.286 Sum_probs=19.2
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
+.+..-+|+.|+++..+|.+...
T Consensus 33 g~s~~~ia~~lgis~~Tv~~w~~ 55 (128)
T 1pdn_C 33 GIRPCVISRQLRVSHGCVSKILN 55 (128)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHHHHHH
Confidence 37888899999999999987654
No 222
>3f6w_A XRE-family like protein; helix-turn-helix, DNA binding protein, xenobiotic response E family of transcriptional regulators; HET: MSE BTB; 1.85A {Pseudomonas syringae PV}
Probab=22.61 E-value=97 Score=16.38 Aligned_cols=23 Identities=22% Similarity=0.293 Sum_probs=18.3
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++-+
T Consensus 27 gltq~elA~~~gis~~~is~~e~ 49 (83)
T 3f6w_A 27 GITQKELAARLGRPQSFVSKTEN 49 (83)
T ss_dssp TCCHHHHHHHHTSCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHC
Confidence 37778889999999888887753
No 223
>3bs3_A Putative DNA-binding protein; XRE-family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.65A {Bacteroides fragilis}
Probab=22.60 E-value=90 Score=16.04 Aligned_cols=23 Identities=9% Similarity=0.123 Sum_probs=19.1
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++..++.++..
T Consensus 23 g~s~~~lA~~~gis~~~i~~~e~ 45 (76)
T 3bs3_A 23 QRTNRWLAEQMGKSENTISRWCS 45 (76)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 47888899999999998887753
No 224
>2ef8_A C.ECOT38IS, putative transcription factor; helix-turn-helix, DNA binding protein, transcription regulator; HET: CME; 1.95A {Enterobacteria phage P2}
Probab=22.59 E-value=95 Score=16.30 Aligned_cols=23 Identities=9% Similarity=0.166 Sum_probs=18.4
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..|++...+.++-+
T Consensus 23 glsq~~lA~~~gis~~~i~~~e~ 45 (84)
T 2ef8_A 23 SLSQSELAIFLGLSQSDISKIES 45 (84)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHhCCCHHHHHHHHc
Confidence 37788899999999988887653
No 225
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A* 3tys_A*
Probab=22.54 E-value=98 Score=17.56 Aligned_cols=23 Identities=17% Similarity=0.187 Sum_probs=20.0
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++..++.++.+
T Consensus 37 glTq~eLA~~~GiS~~tis~iE~ 59 (88)
T 3t76_A 37 DMKKGELREAVGVSKSTFAKLGK 59 (88)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 48889999999999999988754
No 226
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=22.54 E-value=1.5e+02 Score=18.42 Aligned_cols=49 Identities=8% Similarity=0.051 Sum_probs=33.5
Q ss_pred CcceEEEEeeecCCCcceee-c----cccccCCCCCcHHHHHHHhCCCHHHHHHHHhc
Q 039148 29 YGNVVAIVAFSSQNLGVVTI-A----NTAFGSNPAIVTDMLAKAFQAEKKIVKQLQNT 81 (82)
Q Consensus 29 ~~~av~i~~~~s~npg~~~~-~----~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~~ 81 (82)
++..+++.-.+...||-..+ + .+++. ++++.+++-+.+-..+.++++..
T Consensus 31 d~~~~af~d~~P~~pgH~LViPk~H~~~l~d----L~~~e~~~l~~~~~~v~~~l~~~ 84 (149)
T 3ksv_A 31 TSKALAFMDINPLSRGHMLVIPKEHASCLHE----LGMEDAADVGVLLAKASRAVAGP 84 (149)
T ss_dssp CSSEEEEECSSCSSTTCEEEEESSCCSSGGG----SCHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEECCCCCCCCEEEEEeChhhhhhhh----CCHHHHHHHHHHHHHHHHHHHHh
Confidence 34556666666778885544 3 34554 88998988888777788777653
No 227
>3fyr_A Sporulation inhibitor SDA; helical hairpin, histidine kinase inhibitor, sporulation regulation, alternative initiation; 1.97A {Bacillus subtilis} SCOP: a.2.12.1 PDB: 1pv0_A 3d36_C*
Probab=21.94 E-value=99 Score=16.40 Aligned_cols=22 Identities=9% Similarity=0.508 Sum_probs=17.3
Q ss_pred CcHHHHHHHh------CCCHHHHHHHHh
Q 039148 59 IVTDMLAKAF------QAEKKIVKQLQN 80 (82)
Q Consensus 59 ~~~~vLa~af------~~d~~~i~kl~~ 80 (82)
++++.|-+++ +++++.|+-|+.
T Consensus 6 LSDe~LiesY~~A~el~L~~dFI~LL~~ 33 (48)
T 3fyr_A 6 LSDELLIESYFKATEMNLNRDFIELIEN 33 (48)
T ss_dssp SCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hcHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 7888887775 799988887754
No 228
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=21.60 E-value=34 Score=20.16 Aligned_cols=23 Identities=30% Similarity=0.595 Sum_probs=15.5
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
++++.||.++ |.|+.+.-..+-+
T Consensus 22 ~~f~vGD~L~-------F~y~~~~hsV~~v 44 (96)
T 2cbp_A 22 KRFRAGDILL-------FNYNPSMHNVVVV 44 (96)
T ss_dssp CCBCTTCEEE-------EECCTTTCCEEEE
T ss_pred ceEcCCCEEE-------EEecCCCCEEEEE
Confidence 6789999986 5676655444443
No 229
>3qq6_A HTH-type transcriptional regulator SINR; helix-turn-helix motif, biofilm, repressor, SINI; 1.90A {Bacillus subtilis}
Probab=21.54 E-value=1.1e+02 Score=16.43 Aligned_cols=23 Identities=13% Similarity=0.140 Sum_probs=19.3
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++-+
T Consensus 23 gltq~elA~~~gis~~~is~~E~ 45 (78)
T 3qq6_A 23 GYSLSELAEKAGVAKSYLSSIER 45 (78)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHT
T ss_pred CCCHHHHHHHHCcCHHHHHHHHc
Confidence 37888899999999999988754
No 230
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=21.43 E-value=41 Score=23.16 Aligned_cols=21 Identities=19% Similarity=0.294 Sum_probs=16.8
Q ss_pred eecCCcEEEEccCceeEEEec
Q 039148 7 VLKKGDVFVFLVGLVHFKCNV 27 (82)
Q Consensus 7 ~l~~GDv~vfP~G~~H~~~N~ 27 (82)
..++|++++||.++.|--.=+
T Consensus 161 ~P~~G~~v~F~s~~lH~v~pV 181 (243)
T 3dkq_A 161 KLSAGSLVLYPSSSLHQVTPV 181 (243)
T ss_dssp CCCTTCEEEEETTSEEEECCE
T ss_pred ecCCCEEEEECCCCeEcCccc
Confidence 458999999999998875543
No 231
>4dol_A AT1G53520, 94270-95700, chalcon; chalcone-isomerase like fold, fatty-acid binding, isomerase; HET: PLM; 1.70A {Arabidopsis thaliana}
Probab=21.38 E-value=70 Score=21.23 Aligned_cols=21 Identities=19% Similarity=0.251 Sum_probs=15.9
Q ss_pred eecCCcEEEE---ccCceeEEEec
Q 039148 7 VLKKGDVFVF---LVGLVHFKCNV 27 (82)
Q Consensus 7 ~l~~GDv~vf---P~G~~H~~~N~ 27 (82)
.+.+||.+.| |.|-+.+.+|.
T Consensus 147 ~v~kGd~i~~~~~p~~~l~i~~~~ 170 (217)
T 4dol_A 147 PLNKGSVILLTWINTSNMLVSVSS 170 (217)
T ss_dssp CBCTTCEEEEEEEETTEEEEEEES
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeC
Confidence 5889999886 66666777773
No 232
>1wy3_A Villin; structural protein; HET: NLE; 0.95A {Synthetic} PDB: 1wy4_A 1yri_A* 1yrf_A* 2f4k_A* 1vii_A 3trv_A* 3trw_A 3tjw_B* 3trv_B* 3try_A* 2ppz_A 2jm0_A* 3tjw_A* 3iur_B*
Probab=21.37 E-value=87 Score=15.41 Aligned_cols=20 Identities=10% Similarity=0.242 Sum_probs=15.4
Q ss_pred CcHHHHHHHhCCCHHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl 78 (82)
++++=..+.|+++.+...+|
T Consensus 1 Lsd~dF~~vFgmsr~eF~~L 20 (35)
T 1wy3_A 1 LSDEDFKAVFGMTRSAFANL 20 (35)
T ss_dssp CCHHHHHHHHSSCHHHHHHS
T ss_pred CCHHHHHHHHCCCHHHHHHC
Confidence 35666788999999887765
No 233
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.28 E-value=44 Score=21.84 Aligned_cols=23 Identities=22% Similarity=0.156 Sum_probs=17.6
Q ss_pred ecCCcEE---EEccCceeEEEecCCc
Q 039148 8 LKKGDVF---VFLVGLVHFKCNVGYG 30 (82)
Q Consensus 8 l~~GDv~---vfP~G~~H~~~N~G~~ 30 (82)
|++||++ +-+.|-+||..|-.+.
T Consensus 118 l~~Gd~ig~~~~~~G~l~~~iNg~~~ 143 (170)
T 2e63_A 118 LGEGDRVGVERTVAGELRLWVNGRDC 143 (170)
T ss_dssp CCSSCCEEEEECTTSCEEEEESSCEE
T ss_pred cCCCCEEEEEEcCCcEEEEEECCccc
Confidence 4688876 4578999999987644
No 234
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp}
Probab=21.24 E-value=1.1e+02 Score=18.34 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=32.4
Q ss_pred CcceEEEEeeecCCCcceee-c----cccccCCCCCcHHHHHHHhCCCHHHHHHHHh
Q 039148 29 YGNVVAIVAFSSQNLGVVTI-A----NTAFGSNPAIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 29 ~~~av~i~~~~s~npg~~~~-~----~~~F~~~p~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+++.-.+...||-..+ + .+++. ++++.+++-+.+-..+.++|++
T Consensus 25 ~~~~~af~d~~P~~pgH~LViPk~H~~~l~d----L~~~e~~~l~~~~~~v~~~l~~ 77 (138)
T 3p0t_A 25 DDDVVAFLTIEPMTQGHTLVVPREEIDNWQD----VDSAAFNRVMGVSQLIGKAVCK 77 (138)
T ss_dssp CSSEEEEECSSCSSTTCEEEEESSCCCCGGG----SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCCCcEEEEEEhHHhCchhh----CCHHHHHHHHHHHHHHHHHHHH
Confidence 34455666666778886544 3 34554 8899888888877777777654
No 235
>2wiu_B HTH-type transcriptional regulator HIPB; transferase transcription complex, serine kinase, DNA-bindin mercury derivative, repressor; 2.35A {Escherichia coli} PDB: 3dnv_B* 3dnw_B* 3hzi_B*
Probab=21.06 E-value=1.1e+02 Score=16.30 Aligned_cols=23 Identities=17% Similarity=0.273 Sum_probs=19.0
Q ss_pred CCcHHHHHHHhCCCHHHHHHHHh
Q 039148 58 AIVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl~~ 80 (82)
++..+-||+..+++...+.++.+
T Consensus 25 glsq~~lA~~~gis~~~i~~~e~ 47 (88)
T 2wiu_B 25 GWTQSELAKKIGIKQATISNFEN 47 (88)
T ss_dssp TCCHHHHHHHHTCCHHHHHHHHH
T ss_pred CCCHHHHHHHhCCCHHHHHHHHc
Confidence 37888899999999998888753
No 236
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=20.99 E-value=33 Score=20.66 Aligned_cols=16 Identities=19% Similarity=0.343 Sum_probs=12.6
Q ss_pred EEeecCCcEEEEccCc
Q 039148 5 IMVLKKGDVFVFLVGL 20 (82)
Q Consensus 5 ~~~l~~GDv~vfP~G~ 20 (82)
.+.|.+||++.+.+|-
T Consensus 27 ~~~l~~GDiv~v~~G~ 42 (113)
T 2hc8_A 27 VEEVAVGDIVIVRPGE 42 (113)
T ss_dssp GGGCCTTCEEEECTTC
T ss_pred HHHCCCCCEEEECCCC
Confidence 3568899999998773
No 237
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=20.96 E-value=26 Score=22.72 Aligned_cols=16 Identities=19% Similarity=0.144 Sum_probs=13.7
Q ss_pred EEEeecCCcEEEEccC
Q 039148 4 IIMVLKKGDVFVFLVG 19 (82)
Q Consensus 4 ~~~~l~~GDv~vfP~G 19 (82)
.+..|++||.+++|+|
T Consensus 117 ~A~eLk~GD~v~~~~~ 132 (186)
T 2jmz_A 117 NAEMVKVGDYIYIPKN 132 (186)
T ss_dssp EGGGCCTTSEEEEECS
T ss_pred EhhcCCCCCEEEeccc
Confidence 4578999999999985
No 238
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=20.95 E-value=34 Score=21.52 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=15.5
Q ss_pred EeecCCcEEEEccCc--eeEEEecCCc
Q 039148 6 MVLKKGDVFVFLVGL--VHFKCNVGYG 30 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~--~H~~~N~G~~ 30 (82)
..+++||++.|..|- -|--.=.|+.
T Consensus 66 ~~l~pGDLvFf~~~~~~~HVGIyiG~g 92 (135)
T 2k1g_A 66 SNLRTGDLVLFRAGSTGRHVGIYIGNN 92 (135)
T ss_dssp GGCCTTEEEEEEETTTEEEEEEEEETT
T ss_pred HHccCCcEEEECCCCCCeEEEEEecCC
Confidence 468999999996532 2444444444
No 239
>1j9i_A GPNU1 DBD;, terminase small subunit; DNA binding domain, homodimer, viral assembly, winged helix-turn-helix, viral protein; NMR {Enterobacteria phage lambda} SCOP: a.6.1.5
Probab=20.92 E-value=67 Score=17.06 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=16.7
Q ss_pred cHHHHHHHhCCCHHHHHHHHh
Q 039148 60 VTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 60 ~~~vLa~af~~d~~~i~kl~~ 80 (82)
...=+|+.++++..++.+...
T Consensus 4 t~~e~a~~LgvS~~Tl~rw~~ 24 (68)
T 1j9i_A 4 NKKQLADIFGASIRTIQNWQE 24 (68)
T ss_dssp EHHHHHHHTTCCHHHHHHHTT
T ss_pred CHHHHHHHHCcCHHHHHHHHH
Confidence 445588899999999988764
No 240
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=20.87 E-value=1.5e+02 Score=18.09 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=34.8
Q ss_pred eEEEeecCCcEEEEccCceeEEEecCCcceEEEEeeecCCCcceeeccccccCCCCCcHHHHHH
Q 039148 3 LIIMVLKKGDVFVFLVGLVHFKCNVGYGNVVAIVAFSSQNLGVVTIANTAFGSNPAIVTDMLAK 66 (82)
Q Consensus 3 ~~~~~l~~GDv~vfP~G~~H~~~N~G~~~av~i~~~~s~npg~~~~~~~~F~~~p~~~~~vLa~ 66 (82)
++.|+ .+|.-.+--.|.-|+..=.-+-.-.++-..+....|.......|+|-+|.++++++.+
T Consensus 69 ~~~kt-~pG~f~~~~~G~~~~~V~~tdy~~~i~~~~~~~~~g~~~~~~~LygR~~~~s~e~~e~ 131 (157)
T 3fiq_A 69 VGQKH-EDGRYTTDYSGRNYFHVLKKTDDIIFFHNVNVDESGKETNVILVAGKREDLNKAQKQE 131 (157)
T ss_dssp EEEEC-TTSCEEEESSSEEEEEEEEECSSEEEEEEEEECTTSCEEEEEEEEESSSCCCHHHHHH
T ss_pred EEEec-CCCEEEEeecCeEEEEEEEecCCEEEEEEEEEcCCCcEEEEEEEEcCCCCCCHHHHHH
Confidence 45677 7775333124544433322122222333334434566555567999899999998864
No 241
>2jpc_A SSRB; DNA binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium}
Probab=20.76 E-value=80 Score=15.83 Aligned_cols=21 Identities=10% Similarity=0.140 Sum_probs=17.9
Q ss_pred CcHHHHHHHhCCCHHHHHHHH
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQ 79 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~ 79 (82)
++.+-+|+.++++..+|+...
T Consensus 14 ~s~~eIA~~l~is~~tV~~~~ 34 (61)
T 2jpc_A 14 YTNHGISEKLHISIKTVETHR 34 (61)
T ss_dssp CCSHHHHHHTCSCHHHHHHHH
T ss_pred CCHHHHHHHhCCCHHHHHHHH
Confidence 888889999999999887643
No 242
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=20.43 E-value=1.2e+02 Score=16.44 Aligned_cols=21 Identities=14% Similarity=0.045 Sum_probs=17.8
Q ss_pred CCcHHHHHHHhCCCHHHHHHH
Q 039148 58 AIVTDMLAKAFQAEKKIVKQL 78 (82)
Q Consensus 58 ~~~~~vLa~af~~d~~~i~kl 78 (82)
++...=||+.++++..+|++.
T Consensus 14 ~~s~~eLa~~lgvs~~tv~r~ 34 (81)
T 2htj_A 14 GGKTAEIAEALAVTDYQARYY 34 (81)
T ss_dssp CCCHHHHHHHHTSCHHHHHHH
T ss_pred CCCHHHHHHHHCcCHHHHHHH
Confidence 478888999999999888764
No 243
>1t6s_A Conserved hypothetical protein; A winged helix-turn-helix, structural genomics, BSGC structu by NIH, protein structure initiative, PSI; 1.95A {Chlorobium tepidum tls} SCOP: a.4.5.60 a.4.5.60
Probab=20.18 E-value=71 Score=20.77 Aligned_cols=29 Identities=10% Similarity=0.110 Sum_probs=22.4
Q ss_pred cccccCCCCCcHHHHHHHhC--CCHHHHHHH
Q 039148 50 NTAFGSNPAIVTDMLAKAFQ--AEKKIVKQL 78 (82)
Q Consensus 50 ~~~F~~~p~~~~~vLa~af~--~d~~~i~kl 78 (82)
.-+|.+..+++.+-|++.++ ++.+.++++
T Consensus 14 AlLf~~~~pvs~~~La~~~~~~~~~~~v~~~ 44 (162)
T 1t6s_A 14 ALIFSSEEPVNLQTLSQITAHKFTPSELQEA 44 (162)
T ss_dssp HHHHHCSSCBCHHHHHHHTTCCCCHHHHHHH
T ss_pred HHHHHcCCCCCHHHHHHHhCcCCCHHHHHHH
Confidence 34777766799999999999 887655543
No 244
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=20.11 E-value=39 Score=21.45 Aligned_cols=23 Identities=22% Similarity=0.336 Sum_probs=14.7
Q ss_pred EeecCCcEEEEccCceeEEEecCCcceEEE
Q 039148 6 MVLKKGDVFVFLVGLVHFKCNVGYGNVVAI 35 (82)
Q Consensus 6 ~~l~~GDv~vfP~G~~H~~~N~G~~~av~i 35 (82)
|+++.||.++ |.|+.+.-..+.+
T Consensus 30 ~~F~vGD~Lv-------F~y~~~~HsV~~V 52 (138)
T 1jer_A 30 KTFRVGDSLQ-------FNFPANAHNVHEM 52 (138)
T ss_dssp CCEETTCEEE-------ECCCTTTCCCEEE
T ss_pred CcCcCCCEEE-------EeecCCCceEEEe
Confidence 6789999886 4555554444444
No 245
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria phage MU} SCOP: a.4.1.14
Probab=20.08 E-value=1e+02 Score=19.00 Aligned_cols=22 Identities=9% Similarity=-0.013 Sum_probs=19.4
Q ss_pred CcHHHHHHHhCCCHHHHHHHHh
Q 039148 59 IVTDMLAKAFQAEKKIVKQLQN 80 (82)
Q Consensus 59 ~~~~vLa~af~~d~~~i~kl~~ 80 (82)
.+-.-||+.+++++..|.++.+
T Consensus 93 ~n~~eLArkYgLSer~I~~Ii~ 114 (129)
T 1rr7_A 93 RNVSELTTRYGVTFNTVYKAIR 114 (129)
T ss_dssp SCHHHHHHHHTCCHHHHHHHHH
T ss_pred CCHHHHHHHHCCCHHHHHHHHH
Confidence 7889999999999998888754
Done!